Repositories list

• ProteinChains.jl

  Public
  Julia

  •

  MIT License

  •0•2•2•0•Updated Feb 20, 2025Feb 20, 2025

• CHMMAIRRa.jl

  Public
  Julia

  •0•0•0•0•Updated Feb 20, 2025Feb 20, 2025

• CHMMAIRRaAnalyses

  Public
  Jupyter Notebook

  •0•0•0•0•Updated Feb 20, 2025Feb 20, 2025

• RandomFeatureMaps.jl

  Public
  Julia

  •

  MIT License

  •0•0•0•0•Updated Feb 19, 2025Feb 19, 2025

• BatchedTransformations.jl

  Public
  Julia

  •

  MIT License

  •0•0•0•0•Updated Feb 19, 2025Feb 19, 2025

• MessagePassingIPA.jl

  Public
  Julia

  •

  MIT License

  •0•1•1•1•Updated Feb 19, 2025Feb 19, 2025

• ForwardBackward.jl

  Public
  Julia

  •

  MIT License

  •0•1•1•0•Updated Feb 18, 2025Feb 18, 2025

• CodonMolecularEvolution.jl

  Public
  Julia

  •

  MIT License

  •2•2•6•23•Updated Feb 17, 2025Feb 17, 2025

• CHMMera.jl

  Public
  Julia

  •

  MIT License

  •0•3•1•0•Updated Feb 17, 2025Feb 17, 2025

• Jjama3.jl

  Public
  Julia

  •

  MIT License

  •2•29•3•0•Updated Feb 14, 2025Feb 14, 2025

• MurrellGroupRegistry

  Public
  Julia package registry for MurrellGroup

  0•0•0•0•Updated Feb 14, 2025Feb 14, 2025

• BackboneIdealization.jl

  Public
  Julia

  •

  MIT License

  •0•0•0•0•Updated Feb 13, 2025Feb 13, 2025

• Backboner.jl

  Public
  Molecular backbone geometry utilities

  juliabackboneprotein+ 3knotdifferentiabletorsion-angles

  Julia

  •

  MIT License

  •2•3•0•0•Updated Feb 13, 2025Feb 13, 2025

• ProtPlot.jl

  Public
  Protein ribbon plots implemented in Julia using Makie

  juliaplotprotein+ 2ribbonmakie

  Julia

  •

  MIT License

  •1•16•1•0•Updated Feb 13, 2025Feb 13, 2025

• lineages

  Public
  Results from a model of global SARS-CoV-2 lineage competition

  1•38•2•1•Updated Feb 13, 2025Feb 13, 2025

• Manifolds.jl

  Public
  Manifolds.jl provides a library of manifolds aiming for an easy-to-use and fast implementation.

  Julia

  •

  MIT License

  •62•0•0•0•Updated Feb 11, 2025Feb 11, 2025

• Onion.jl

  Public
  It has layers.

  Julia

  •

  MIT License

  •1•0•0•0•Updated Feb 10, 2025Feb 10, 2025

• SeqUMAP.jl

  Public
  Julia

  •

  MIT License

  •1•0•0•0•Updated Feb 7, 2025Feb 7, 2025

• MolecularEvolution.jl

  Public
  A Julia framework for developing phylogenetic models

  Julia

  •

  MIT License

  •5•13•12•5•Updated Feb 4, 2025Feb 4, 2025

• NanobodyMiner

  Public
  Julia

  •0•2•0•0•Updated Jan 31, 2025Jan 31, 2025

• ManifoldFlows.jl

  Public
  Julia

  •

  MIT License

  •1•1•0•2•Updated Jan 31, 2025Jan 31, 2025

• InvariantPointAttention.jl

  Public
  Julia implementation of AlphaFold 2's Invariant Point Attention

  Julia

  •

  MIT License

  •2•5•2•0•Updated Jan 31, 2025Jan 31, 2025

• MaskedStates.jl

  Public
  0•0•0•0•Updated Jan 30, 2025Jan 30, 2025

• LearningSchedules.jl

  Public
  Simple Learning Schedules in Julia

  Julia

  •

  MIT License

  •0•0•0•0•Updated Jan 21, 2025Jan 21, 2025

• HuggingFaceTokenizers.jl

  Public
  Julia wrapper of a Python wrapper of a Rust library

  Julia

  •

  MIT License

  •0•4•4•0•Updated Jan 15, 2025Jan 15, 2025

• HuggingFaceTransformers.jl

  Public
  Julia

  •

  MIT License

  •0•1•0•0•Updated Dec 29, 2024Dec 29, 2024

• Zygote.jl

  Public
  21st century AD

  Julia

  •

  Other

  •213•0•0•0•Updated Dec 29, 2024Dec 29, 2024

• ColabMolecularEvolution

  Public
  A collection of Google Colab notebooks for phylogenetic models

  Jupyter Notebook

  •

  MIT License

  •0•0•0•0•Updated Dec 24, 2024Dec 24, 2024

• CannotWaitForTheseOptimisers.jl

  Public
  Julia

  •

  MIT License

  •0•1•0•0•Updated Dec 23, 2024Dec 23, 2024

• PORPIDpipeline

  Public
  A pipeline for long-read UMI/PID sequencing of HIV amplicons.

  Julia

  •1•0•0•0•Updated Dec 22, 2024Dec 22, 2024