Add pyopenssl

.github/workflows/ci.yml

@@ -21,11 +21,6 @@ jobs:
       - name: Checkout zarp repository
         uses: actions/checkout@v4
 
-      - name: Setup OpenSSL
-        run: |
-          sudo apt-get update
-          sudo apt-get install -y openssl
-
       - name: Setup miniconda & zarp env
         uses: conda-incubator/setup-miniconda@v3
         with:
@@ -52,14 +47,14 @@ jobs:
       - name: Run test script for snakemake format
         run: bash tests/test_format/test_snakefmt.sh
 
-      #- name: Run test script for snakemake lint
-      #  run: bash tests/test_format/test_snakemake_lint.sh
+      - name: Run test script for snakemake lint
+        run: bash tests/test_format/test_snakemake_lint.sh
 
-      #- name: Run test script for snakemake rulegraph
-      #  run: bash tests/test_create_rule_graph/test.sh
+      - name: Run test script for snakemake rulegraph
+        run: bash tests/test_create_rule_graph/test.sh
 
-      #- name: Run test script for snakemake DAG
-      #  run: bash tests/test_create_dag_image/test.sh
+      - name: Run test script for snakemake DAG
+        run: bash tests/test_create_dag_image/test.sh
 
 
   integration-singularity:

install/environment.yml

@@ -5,4 +5,5 @@ channels:
 dependencies:
   - python>=3.10, <3.12
   - snakemake<8
-  - graphviz
+  - graphviz
+  - pyopenssl>=23.2.0