chore: update cruft

.cruft.json

@@ -1,6 +1,6 @@
 {
   "template": "https://github.com/usnistgov/cookiecutter-nist-python.git",
-  "commit": "88c234d5a8d5a0c71c08bde51be21abb83bc09aa",
+  "commit": "5c831aacaf85f4a0025a66074fd34fd056da7b22",
   "checkout": "develop",
   "context": {
     "cookiecutter": {

CONTRIBUTING.md

@@ -503,7 +503,6 @@ like to install them in the development environment instead, use the
 
 Additional tools are:
 
-- [pip-tools]
 - [pre-commit]
 - [scriv]
 - [nbqa]
@@ -515,7 +514,6 @@ Additional tools are:
 These are setup using the following:
 
 ```console
-condax/pipx install pip-tools
 condax/pipx install pre-commit
 pipx install scriv
 condax/pipx install nbqa

noxfile.py

@@ -182,6 +182,7 @@ class SessionParams(DataclassParser):
     )
     pip_compile_opts: OPT_TYPE = add_option(help="options to pip-compile")
     pip_compile_run: RUN_ANNO = None
+    pip_compile_run_internal: RUN_ANNO = None
 
     # test
     test_no_pytest: bool = False
@@ -459,11 +460,15 @@ def create_lock(path: Path) -> None:
 
 @nox.session(name="pip-compile", **ALL_KWS)
 @add_opts
-def pip_compile(
+def pip_compile(  # noqa: C901
     session: Session,
     opts: SessionParams,
 ) -> None:
-    """Run pip-compile."""
+    """Run pip-compile.
+
+    Note that this session is also used to run pip-sync with correct python version for
+    tests/typing/etc.
+    """
     runner = Installer(
         session=session,
         pip_deps=["pip-tools"],
@@ -475,6 +480,10 @@ def pip_compile(
         runner.run_commands(opts.pip_compile_run)
         return
 
+    if opts.pip_compile_run_internal:
+        runner.run_commands(opts.pip_compile_run_internal, external=False)
+        return
+
     options = opts.pip_compile_opts or []
 
     force = (

pyproject.toml

@@ -77,7 +77,6 @@ test = [
     "pytest-xdist",
 ]
 tools = [
-    "pip-tools",
     "pre-commit",
     "pyright",
     "scriv",
@@ -119,7 +118,6 @@ fragments = [
 [tool.ruff]
 fix = true
 line-length = 88
-# Handle notebooks as well
 extend-include = ["*.ipynb"]
 extend-exclude = [
     ".venv",
@@ -133,26 +131,16 @@ unsafe-fixes = true
 # use nbqa for ruff linting
 preview = true
 select = ["ALL"]
-# Allow autofix for all enabled rules (when `--fix`) is provided.
-# fixable = ["A", "B", "C", "D", "E", "F", "..."]
+# fixable = ["ALL"]
 # unfixable = []
-# Exclude a variety of commonly ignored directories.
 ignore = [
-    "PD",        # - not using pandas?
-    "NPY",       # - not using numpy?
     "CPY",       # - Don't require copyright
     "ERA",       # - eradicate (want to keep some stuff)
     "FBT",       # - bools are ok
     # * Annotations
-    # "SLF001",  # - flake8-self (private access sometimes OK)
-    # "ANN",     # - Annotations (just use mypy/pyright)
     "ANN101",    # - Leads to issues with methods and self
     "ANN102",    # - Leads to issues with classmethods and cls
     "ANN401",    # - Any ok sometimes
-    # * pylint
-    # "PLR2004", # - numbers in comparison sometimes ok
-    # "PLR0913", # - complexity sometimes ok
-    # "PLR0917", # - complexity sometimes ok
     # * Allow non top level imports
     "PLC0415",   # - import should be at top level (leads to issues with imports in func?)
     "TID252",    # - Allow relative imports
@@ -164,13 +152,10 @@ ignore = [
     "D105",      # - Missing magic method docstring
     "D205",      # - blank line after summary
     # * This leads to errors with placing titles in module
-    # "D102",    # - Missing docstring in public method
-    # "D103",    # - Missing docstring in public function
     "D400",      # - First line should end with a period
     "D401",      # - First line of docstring should be in imperative mood: "{first_line}"
     "D415",      # - First line should end with a period, question mark, or exclamation point
     # * Not a fan of these.  And lead to issues with docfiller
-    # "D202",    # - blank line after docstring
     "D107",      # - Missing docstring in __init__
     "D203",      # - 1 blank line required before class docstring
     "D212",      # - Multi-line docstring summary should start at the first line
@@ -181,6 +166,23 @@ ignore = [
 ]
 # Allow unused variables when underscore-prefixed.
 dummy-variable-rgx = "^(_+|(_+[a-zA-Z0-9_]*[a-zA-Z0-9]+?))$"
+# Use extend-ignore for project specific ignores (avoid changing ignore directly)
+extend-ignore = [
+    "PD",        # - not using pandas?
+    "NPY",       # - not using numpy?
+    # * Annotations
+    # "SLF001",  # - flake8-self (private access sometimes OK)
+    # "ANN",     # - Annotations (just use mypy/pyright)
+    # * pylint
+    # "PLR2004", # - numbers in comparison sometimes ok
+    # "PLR0913", # - complexity sometimes ok
+    # "PLR0917", # - complexity sometimes ok
+    # * Docstrings ymmv
+    # "D102",    # - Missing docstring in public method
+    # "D103",    # - Missing docstring in public function
+    # "D202",    # - blank line after docstring
+]
+
 
 [tool.ruff.lint.pydocstyle]
 convention = "numpy"
@@ -192,12 +194,13 @@ max-public-methods = 30
 
 [tool.ruff.lint.per-file-ignores]
 "docs/conf.py" = ["INP001"]
-"tests/*.py" = ["D", "S101"]
 "noxfile.py" = ["RUF009"]
 "tools/*.py" = ["S", "A", "SLF001"]
+"tests/*.py" = ["D", "S101"]
 "**/*.ipynb" = ["D100", "B018", "INP001"]
 
 [tool.ruff.lint.extend-per-file-ignores]
+# Project specific ignores (avoid changing per-file-ignores directly)
 "tests/*.py" = ["ANN", "PT011", "PLC2701", "PLR2004"]
 "**/cli.py" = ["FA100", "ARG001", "T201", "PLR0913", "PLR0917", "D102"]
 "tools/cog_utils.py" = ["D"]

requirements/dev-complete.txt

@@ -12,7 +12,6 @@ ipython
 mypy>=1.4.1
 nox
 packaging
-pip-tools
 pre-commit
 pyright
 pytest

requirements/lock/py310-test.txt

@@ -2,11 +2,11 @@
 # This file is autogenerated by pip-compile with Python 3.10
 # by the following command:
 #
-#    pip-compile --output-file=./requirements/lock/py310-test.txt ./requirements/test.txt
+#    pip-compile --allow-unsafe --output-file=requirements/lock/py310-test.txt --strip-extras requirements/test.txt
 #
 click==8.1.7
     # via typer
-coverage[toml]==7.3.2
+coverage==7.4.1
     # via
     #   coverage
     #   pytest-cov
@@ -18,33 +18,33 @@ iniconfig==2.0.0
     # via pytest
 packaging==23.2
     # via
-    #   -r ./requirements/test.txt
+    #   -r requirements/test.txt
     #   pytest
     #   pytest-sugar
-pluggy==1.3.0
+pluggy==1.4.0
     # via pytest
-pytest==7.4.3
+pytest==8.0.0
     # via
-    #   -r ./requirements/test.txt
+    #   -r requirements/test.txt
     #   pytest-cov
     #   pytest-sugar
     #   pytest-xdist
 pytest-cov==4.1.0
-    # via -r ./requirements/test.txt
+    # via -r requirements/test.txt
 pytest-sugar==0.9.7
-    # via -r ./requirements/test.txt
+    # via -r requirements/test.txt
 pytest-xdist==3.5.0
-    # via -r ./requirements/test.txt
+    # via -r requirements/test.txt
 termcolor==2.4.0
     # via pytest-sugar
 tomli==2.0.1
     # via
-    #   -r ./requirements/test.txt
+    #   -r requirements/test.txt
     #   coverage
     #   pytest
 tomlkit==0.12.3
-    # via -r ./requirements/test.txt
+    # via -r requirements/test.txt
 typer==0.9.0
-    # via -r ./requirements/test.txt
-typing-extensions==4.8.0
+    # via -r requirements/test.txt
+typing-extensions==4.9.0
     # via typer

requirements/lock/py310-typing.txt

@@ -4,7 +4,7 @@
 #
 #    pip-compile --allow-unsafe --output-file=requirements/lock/py310-typing.txt --strip-extras requirements/typing.txt
 #
-attrs==23.1.0
+attrs==23.2.0
     # via pytype
 click==8.1.7
     # via typer
@@ -14,13 +14,13 @@ importlab==0.8.1
     # via pytype
 iniconfig==2.0.0
     # via pytest
-jinja2==3.1.2
+jinja2==3.1.3
     # via pytype
 libcst==1.1.0
     # via pytype
-markupsafe==2.1.3
+markupsafe==2.1.4
     # via jinja2
-mypy==1.7.1
+mypy==1.8.0
     # via -r requirements/typing.txt
 mypy-extensions==1.0.0
     # via
@@ -36,17 +36,17 @@ packaging==23.2
     # via
     #   -r requirements/typing.txt
     #   pytest
-pluggy==1.3.0
+pluggy==1.4.0
     # via pytest
 pycnite==2023.10.11
     # via pytype
-pydot==1.4.2
+pydot==2.0.0
     # via pytype
 pyparsing==3.1.1
     # via pydot
-pytest==7.4.3
+pytest==8.0.0
     # via -r requirements/typing.txt
-pytype==2023.11.29 ; python_version < "3.11"
+pytype==2024.1.24 ; python_version < "3.11"
     # via -r requirements/typing.txt
 pyyaml==6.0.1
     # via libcst
@@ -65,7 +65,7 @@ typer==0.9.0
     # via -r requirements/typing.txt
 types-click==7.1.8
     # via -r requirements/typing.txt
-typing-extensions==4.8.0
+typing-extensions==4.9.0
     # via
     #   libcst
     #   mypy