change paths for dockerized app

assets/core/data_access_utils.R

@@ -1016,7 +1016,8 @@ loadLocalDataset <- function(filename){
 #loadLocalCountryDatasets
 #@deprecated
 loadLocalCountryDatasets <- function(config){
-  country_dir <- sprintf("./data/country/%s", config$country_profile$iso3)
+  local_dir <- if(config$local) "../calipseo-data" else "data"
+  country_dir <- sprintf("%s/country/%s", local_dir, config$country_profile$iso3)
   if(dir.exists(country_dir)){
     files <- list.files(path = country_dir, full.names = TRUE)
     for(file in files){
@@ -1028,8 +1029,8 @@ loadLocalCountryDatasets <- function(config){
 
 #getLocalCountryDataset
 getLocalCountryDataset <- function(config,filename){
-  #get(name, envir = CALIPSEO_SHINY_ENV)
-  country_dir <- sprintf("../calipseo-data/country/%s", config$country_profile$iso3)
+  local_dir <- if(config$local) "../calipseo-data" else "data"
+  country_dir <- sprintf("%s/country/%s", local_dir, config$country_profile$iso3)
   filename <- file.path(country_dir, filename)
   data <- switch(mime::guess_type(filename),
    "application/json" = jsonlite::read_json(filename),
@@ -1042,7 +1043,8 @@ getLocalCountryDataset <- function(config,filename){
 #@deprecated
 getLocalCountryDatasets <- function(config){
   out <- list()
-  country_dir <- sprintf("../calipseo-data/country/%s", config$country_profile$iso3)
+  local_dir <- if(config$local) "../calipseo-data" else "data"
+  country_dir <- sprintf("%s/country/%s", local_dir, config$country_profile$iso3)
   if(dir.exists(country_dir)){
     files <- list.files(path = country_dir, full.names = TRUE)
     out <- lapply(files, function(file){

global.R

@@ -60,24 +60,29 @@ require(artfishr)
 #config
 #---------------------------------------------------------------------------------------
 #default config_file path for DEPLOYMENT
-config_file <- "/etc/shiny-server/config.yml"
+config_file <- "/etc/calipseo-shiny/config.yml"
 
 #local configuration
 #If you are an R developer, you need to create a .REnviron file (no file extension) in /shiny-calipseo dir
 #The file should include the local path for your shiny config file in that way:
 #CALIPSEO_SHINY_CONFIG=<your config path>
 
+local <- FALSE
 local_config_file <- Sys.getenv("CALIPSEO_SHINY_CONFIG")
-if(nzchar(local_config_file)) config_file <- local_config_file
+if(nzchar(local_config_file)){
+  config_file <- local_config_file
+  local <- TRUE
+}
 appConfig <- suppressWarnings(yaml::read_yaml(config_file))
+appConfig$local <- local
 
 if(is.null(appConfig$auth)) appConfig$auth <- FALSE
 
 #language (in case not part of configuration)
 if(is.null(appConfig$language)) appConfig$language <- "en"
 
 #shiny-storage check
-default_store_dir <- "/srv/shiny-server/shiny-calipseo-store"
+default_store_dir <- "/srv/calipseo-shiny-store"
 #shiny-storage in dev (assume Windows OS for now)
 if(Sys.info()[["sysname"]] == "Windows") default_store_dir <- "out"
 if(is.null(appConfig$store)) appConfig$store <- default_store_dir
@@ -106,8 +111,6 @@ CALIPSEO_SHINY_ENV <- new.env()
 core_assets <- list.files("assets/core", pattern = ".R", full.names = T)
 for(core_asset in core_assets) source(core_asset)
 
-#addResourcePath(prefix = "calipseo-data", directoryPath = "../calipseo-data")
-
 #country R script utils
 country_assets <- list.files(path = file.path("./assets/country", appConfig$country_profile$iso3), 
                              pattern = ".R", recursive = TRUE, full.names = TRUE)

package.json

@@ -1,7 +1,7 @@
 {
   "id": "shiny-calipseo",
-  "version": "2.0.0",
-  "date": "2025-01-30",
+  "version": "2.0.0-sp3",
+  "date": "2025-01-31",
   "dependencies": [
     {"package": "dotenv", "version": "1.0.3", "repos": "https://cran.r-project.org"},
     {"package": "htmltools", "version": "0.5.2", "repos": "https://cloud.r-project.org"},