Update Pipfile & Pipfile.lock (#230)

- Updated Pipfile and Pipfile.lock
- Added `pipenv lock --keep-outdated` to automated workflows to support cross-platform deployment. See pypa/pipenv#3902.

.github/workflows/linux-build-gui-executable.yml

@@ -35,6 +35,7 @@ jobs:
         sudo apt-get install libgeos-dev
     - name: Install dependencies via pipenv
       run: |
+        python3.7 -m pipenv lock --keep-outdated
         python3.7 -m pipenv install --dev
     - name: Create linux app
       run: |

.github/workflows/macos-build-gui-executable.yml

@@ -33,7 +33,9 @@ jobs:
       # see https://github.com/ssantichaivekin/empress/issues/172
       run: |
         export PIPENV_IGNORE_VIRTUALENVS=1
-        PIP_NO_BINARY="shapely" python -m pipenv install --dev
+        export PIP_NO_BINARY="shapely"
+        python -m pipenv lock --keep-outdated
+        python -m pipenv install --dev
     - name: Create macos app
       run: |
         pipenv run pyinstaller pyinstaller_spec/empress_gui_app.spec

.github/workflows/run-tests-and-draw-examples.yml

@@ -23,6 +23,7 @@ jobs:
       uses: dschep/install-pipenv-action@v1
     - name: Install dependencies
       run: |
+        pipenv lock --keep-outdated
         pipenv install --dev
     - name: Lint with flake8
       run: |

.github/workflows/windows-build-gui-executable.yml

@@ -21,6 +21,7 @@ jobs:
         python -m pip install pipenv
     - name: Install dependencies via pipenv
       run: |
+        python -m pipenv lock --keep-outdated
         python -m pipenv install --dev
     - name: Create windows app
       run: |

Pipfile

@@ -10,15 +10,11 @@ python_version = '3.7'
 biopython = '*'
 networkx = '*'
 pydot = '*'
-# Pyinstaller doesn't work with matplotlib 3.3.0
-# https://github.com/pyinstaller/pyinstaller/pull/5006
-# TODO: change to matplotlib = '*' after fix is released
-matplotlib = '==3.2.*'
+matplotlib = '*'
 shapely = '*'
 numpy = '*'
 
 [dev-packages]
 coverage = '*'
 flake8 = "*"
-pywin32-ctypes = {version = "*", sys_platform = "== 'win32'"}
 pyinstaller = "*"