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    128 repositories

    • website

      Public
      UseGalaxy.EU website (compiled version https://github.com/usegalaxy-eu/usegalaxy-eu.github.io)
      TeX
      •
      MIT License
      •117•19•29•8•Updated Feb 28, 2025Feb 28, 2025

    • usegalaxy-eu-tools

      Public
      List of tools included in https://usegalaxy.eu
      toolsgalaxyproject
      Python
      •
      MIT License
      •131•26•34•5•Updated Feb 28, 2025Feb 28, 2025

    • infrastructure-playbook

      Public
      Ansible playbook for managing UseGalaxy.eu infrastructure.
      ansible
      Jinja
      •
      MIT License
      •99•18•19•29•Updated Feb 28, 2025Feb 28, 2025

    • galaxy-social

      Public
      Repository for democratising of Galaxy's social media activity - encourage collaboration, editing, peer-review of toots 🐘 and more
      Python
      •
      Creative Commons Zero v1.0 Universal
      •9•6•14•27•Updated Feb 28, 2025Feb 28, 2025

    • microgalaxy_paper_2025

      Public
      Jupyter Notebook
      •
      MIT License
      •2•1•3•1•Updated Feb 27, 2025Feb 27, 2025

    • vgcn

      Public
      Virtual Galaxy Compute Nodes (vgcn)
      ansiblebioinformaticspackervirtualizationusegalaxy
      Python
      •9•6•6•4•Updated Feb 26, 2025Feb 26, 2025

    • vpt

      Public
      Docker image with VPT (The Vizgen Post-processing Tool)
      MIT License
      •0•0•0•0•Updated Feb 26, 2025Feb 26, 2025

    • mounts

      Public
      A single place to maintain our mountpoints
      Jinja
      •
      MIT License
      •3•0•0•0•Updated Feb 26, 2025Feb 26, 2025

    • infrastructure

      Public
      All of Galaxyproject EU's cloud infrastructure.
      HCL
      •
      MIT License
      •25•8•1•1•Updated Feb 25, 2025Feb 25, 2025

    • galaxy

      Public
      Data intensive science for everyone.
      Python
      •
      Other
      •1k•3•6•2•Updated Feb 22, 2025Feb 22, 2025

    • docker-cellxgene

      Public
      Docker image with CELLxGENE
      Dockerfile
      •
      MIT License
      •0•0•0•0•Updated Feb 22, 2025Feb 22, 2025

    • vgcn-infrastructure

      Public
      Manage the VGCN Infrastructure https://github.com/usegalaxy-eu/vgcn/
      Python
      •
      GNU General Public License v3.0
      •6•4•1•5•Updated Feb 22, 2025Feb 22, 2025

    • ansible-dnbd3

      Public
      Ansible role that sets up a DNBD3 server or proxy
      Jinja
      •0•0•0•0•Updated Feb 21, 2025Feb 21, 2025

    • usegalaxy-eu.github.io

      Public
      Deployed website (source is in https://github.com/usegalaxy-eu/website )
      HTML
      •
      MIT License
      •3•1•0•2•Updated Feb 21, 2025Feb 21, 2025

    • docker-cellxgene-mouse-sciatic-nerve

      Public
      Docker image to visualize mouse sciatic nerve data with cellxgene
      Dockerfile
      •
      MIT License
      •1•0•0•0•Updated Feb 20, 2025Feb 20, 2025

    • docker-cellxgene-vip

      Public
      Docker image with CELLxGENE and the VIP plugins
      Dockerfile
      •
      MIT License
      •0•0•0•0•Updated Feb 20, 2025Feb 20, 2025

    • ansible-rustus

      Public
      Ansible role for installing rustus, a TUS protocol implementation written in Rust.
      Jinja
      •
      MIT License
      •1•1•1•0•Updated Feb 20, 2025Feb 20, 2025

    • FAIRyMAGs

      Public
      FAIRyMAGs - BFSP Project Management
      MIT License
      •2•1•35•1•Updated Feb 20, 2025Feb 20, 2025

    • tpv-metascheduler-api

      Public
      Metascheduler for TPV as Service
      Python
      •
      MIT License
      •5•0•7•1•Updated Feb 18, 2025Feb 18, 2025

    • pulsar-network-docs

      Public
      Documentation for the Galaxy Pulsar network
      Python
      •
      Creative Commons Attribution 4.0 International
      •5•1•4•2•Updated Feb 17, 2025Feb 17, 2025

    • pulsar-deployment

      Public
      Various terraform stuff
      HCL
      •
      GNU General Public License v3.0
      •14•3•2•3•Updated Feb 17, 2025Feb 17, 2025

    • ena-upload-cli

      Public
      ENA upload tool - script your Open Data upload to the European Nucleotide Archive
      Python
      •
      MIT License
      •16•28•8•0•Updated Feb 17, 2025Feb 17, 2025

    • intergalactic-most-wanted-list

      Public
      A database for malware checksums for use with the WallE malware cleanup script
      MIT License
      •2•1•0•0•Updated Feb 16, 2025Feb 16, 2025

    • ansible-gie-proxy

      Public
      Ansible Role for setting up the Node.js proxy for Galaxy Interactive Environments/Tools
      Jinja
      •3•0•2•0•Updated Feb 13, 2025Feb 13, 2025

    • PathoGFAIR

      Public
      PathoGFAIR: Galaxy FAIR Workflows for Pathogen Detection and Samples Comparison
      visualizationdata-analysisgalaxyworkflowspathogens
      Jupyter Notebook
      •
      MIT License
      •3•2•0•0•Updated Feb 12, 2025Feb 12, 2025

    • shared-data

      Public
      Our shared data
      Shell
      •5•6•3•2•Updated Feb 6, 2025Feb 6, 2025

    • docker-copasi

      Public
      Docker image for COPASI to be used as Galaxy IT
      Dockerfile
      •
      MIT License
      •0•0•0•0•Updated Jan 26, 2025Jan 26, 2025

    • galaxy-social-assistant

      Public
      Python
      •
      MIT License
      •1•0•0•1•Updated Jan 16, 2025Jan 16, 2025

    • WallE

      Public
      Ansible role for a python script that fetches (toolname filtered) running jobs, calculates checksums for all files in the jobworking directory and compares them to a database.
      securitymalware-analysis
      Python
      •
      MIT License
      •2•0•3•0•Updated Jan 16, 2025Jan 16, 2025

    • ansible-tftp

      Public
      Ansible role that sets up a TFTP server
      Jinja
      •
      MIT License
      •0•1•0•0•Updated Jan 15, 2025Jan 15, 2025