Bioconductor

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321 repositories

status.bioconductor.org
Public
Status page for Bioconductor based on cstate hugo site
0•0•0•0•Updated Feb 2, 2025Feb 2, 2025
gha-build-rstudio-release-amd64
Public
R
•0•0•0•0•Updated Feb 2, 2025Feb 2, 2025
BiocSlack
Public
CSS
•
MIT License
•0•1•0•0•Updated Feb 2, 2025Feb 2, 2025
bioconductor-training
Public
Bioconductor teaching and education committee
training education teaching bioconductor committee
HTML
•26•44•8•0•Updated Feb 1, 2025Feb 1, 2025
HDF5Array
Public
HDF5 datasets as array-like objects in R
bioconductor-package core-package u24ca289073
R
•14•11•4•1•Updated Feb 1, 2025Feb 1, 2025
bioconductor_docker
Public
Docker Containers for Bioconductor
docker-image bioconductor bioconductor-containers
Shell
•
Artistic License 2.0
•31•75•16•3•Updated Jan 31, 2025Jan 31, 2025
bioconductor_salt
Public
Salt to configure Linux and Mac (x86_64, arm64) for the BBS
vagrant saltstack bioconductor
SaltStack
•3•1•27•2•Updated Jan 31, 2025Jan 31, 2025
gbcc2025
Public
CSS
•
MIT License
•2•0•0•0•Updated Jan 30, 2025Jan 30, 2025
bioconductor.org
Public
Source code for the Bioconductor website
website bioconductor
HTML
•40•25•13•11•Updated Jan 30, 2025Jan 30, 2025
anvil-portal
Public
The front-facing AnVIL user portal
Jupyter Notebook
•
MIT License
•21•0•0•1•Updated Jan 30, 2025Jan 30, 2025
support.bioconductor.org
Public
support site code base. Based on Biostars.
Python
•
MIT License
•3•2•22•0•Updated Jan 30, 2025Jan 30, 2025
BiocManager
Public
CRAN Package For Managing Bioconductor Packages
core-services cran r-package
R
•25•74•20•3•Updated Jan 29, 2025Jan 29, 2025
workshop-contributions
Public
Repository for managing contributions to workshop.bioconductor.org
HTML
•0•5•0•0•Updated Jan 29, 2025Jan 29, 2025
pkgrevdocs
Public
Training Material for Community Reviewers
TeX
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Other
•18•8•10•1•Updated Jan 28, 2025Jan 28, 2025
Contributions
Public
Contribute Packages to Bioconductor
bioconductor
33•135•63•0•Updated Jan 28, 2025Jan 28, 2025
BBS
Public
The Bioconductor Build System
Shell
•11•9•50•2•Updated Jan 26, 2025Jan 26, 2025
BiocGenerics
Public
Defines many S4 generic functions used in Bioconductor
bioconductor-package core-package
R
•8•12•0•0•Updated Jan 26, 2025Jan 26, 2025
BiocHubsShiny
Public
R
•0•0•0•0•Updated Jan 24, 2025Jan 24, 2025
AnVIL
Public
Interact with AnVIL and Leonardo projects
R
•10•8•11•0•Updated Jan 24, 2025Jan 24, 2025
AnVILGCP
Public
Functionality for the AnVIL platform using GCP
R
•0•0•0•0•Updated Jan 23, 2025Jan 23, 2025
GenomeInfoDb
Public
Utilities for manipulating chromosome names, including modifying them to follow a particular naming style
bioconductor-package core-package
R
•13•32•7•0•Updated Jan 23, 2025Jan 23, 2025
hubsingest
Public
Scripts to facilitate ingestion at temporary endpoints for data targeting the Bioconductor Hubs
Shell
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MIT License
•0•0•0•0•Updated Jan 23, 2025Jan 23, 2025
BiocHubsIngestR
Public
Helper package for users to upload data to temporary BiocHubsIngest endpoints
u24ca289073
R
•
MIT License
•0•0•0•0•Updated Jan 23, 2025Jan 23, 2025
EuroBioC2025
Public
Website of the European Bioconductor Conference 2025
conference bioconductor european
CSS
•3•2•0•0•Updated Jan 23, 2025Jan 23, 2025
BSgenome
Public
Software infrastructure for efficient representation of full genomes and their SNPs
bioconductor-package core-package
R
•8•9•7•0•Updated Jan 21, 2025Jan 21, 2025
pwalign
Public
Perform pairwise sequence alignments
bioconductor-package
R
•1•1•7•0•Updated Jan 21, 2025Jan 21, 2025
HubPub
Public
bioconductor-package
R
•4•3•4•1•Updated Jan 21, 2025Jan 21, 2025
BiocReporting
Public
Public repo for Bioconductor project reporting 2022
TeX
•6•0•0•0•Updated Jan 18, 2025Jan 18, 2025
DelayedArray
Public
A unified framework for working transparently with on-disk and in-memory array-like datasets
bioconductor-package core-package u24ca289073
R
•9•26•18•0•Updated Jan 17, 2025Jan 17, 2025
SparseArray
Public
High-performance sparse data representation and manipulation in R
bioconductor-package core-package
C
•2•8•3•0•Updated Jan 17, 2025Jan 17, 2025