Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Fixes #2925 Conjunctiva goblet cell #2928

Merged
merged 6 commits into from
Feb 11, 2025
Merged

Fixes #2925 Conjunctiva goblet cell #2928

Changes from all commits
Commits
Show all changes
6 commits
Select commit Hold shift + click to select a range
01a8ba7
Fixes #2925 Conjunctiva goblet cell
Caroline-99 Feb 3, 2025
5d3ed7b
Merge branch 'master' into 2925-text-and-logical-def-conjunctiva-gobl…
Caroline-99 Feb 3, 2025
8f39a99
Merge branch 'master' into 2925-text-and-logical-def-conjunctiva-gobl…
Caroline-99 Feb 11, 2025
7e4d8ca
updated definition and synonym
Caroline-99 Feb 11, 2025
0266d11
Merge branch '2925-text-and-logical-def-conjunctiva-goblet-cell' of h…
Caroline-99 Feb 11, 2025
36728aa
Merge branch 'master' into 2925-text-and-logical-def-conjunctiva-gobl…
Caroline-99 Feb 11, 2025
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
12 changes: 6 additions & 6 deletions src/ontology/cl-edit.owl
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -3403,7 +3403,7 @@ AnnotationAssertion(rdfs:label obo:IAO_0000115 "definition")

AnnotationAssertion(rdfs:label obo:IAO_0000424 "expand expression to")

# Annotation Property: obo:IAO_0000700 (preferred_root)
# Annotation Property: obo:IAO_0000700 (has ontology root term)

AnnotationAssertion(rdfs:label obo:IAO_0000700 "preferred_root")

Expand Down Expand Up @@ -3493,11 +3493,11 @@ AnnotationAssertion(rdfs:label oboInOwl:hasBroadSynonym "has_broad_synonym")

AnnotationAssertion(rdfs:label oboInOwl:hasDbXref "database_cross_reference")

# Annotation Property: oboInOwl:hasExactSynonym (has_exact_synonym)
# Annotation Property: oboInOwl:hasExactSynonym (has exact synonym)

AnnotationAssertion(rdfs:label oboInOwl:hasExactSynonym "has_exact_synonym")

# Annotation Property: oboInOwl:hasNarrowSynonym (has_narrow_synonym)
# Annotation Property: oboInOwl:hasNarrowSynonym (has narrow synonym)

AnnotationAssertion(rdfs:label oboInOwl:hasNarrowSynonym "has_narrow_synonym")

Expand Down Expand Up @@ -29150,12 +29150,12 @@ EquivalentClasses(obo:CL_2000083 ObjectIntersectionOf(obo:CL_0000346 ObjectSomeV

# Class: obo:CL_2000084 (conjunctiva goblet cell)

AnnotationAssertion(Annotation(oboInOwl:hasDbXref "GOC:TermGenie") obo:IAO_0000115 obo:CL_2000084 "Any goblet cell that is part of a conjunctiva.")
AnnotationAssertion(Annotation(oboInOwl:hasDbXref "GOC:TermGenie") Annotation(oboInOwl:hasDbXref "PMID:27091323") Annotation(oboInOwl:hasDbXref "PMID:28475124") Annotation(oboInOwl:hasDbXref "PMID:31734511") obo:IAO_0000115 obo:CL_2000084 "A goblet cell that is part of the conjunctival epithelium, characterized by apical accumulation of mucin granules (containing MUC5AC in humans; Muc5ac/Muc5b in mice). These gel-forming mucins support tear film stability, ocular lubrication, and pathogen defence. The conjunctival goblet cell forms tight junctions with neighbouring epithelial cells via species-specific claudins (claudin-10 in humans, claudin-2 in mice) and regulates immune homeostasis by facilitating soluble antigen transport to dendritic cells through goblet cell-associated antigen passages (GAPs) (Barbosa et al., 2017). The transcription factor SPDEF is essential for its differentiation.")
AnnotationAssertion(terms:contributor obo:CL_2000084 <http://www.wikidata.org/entity/Q35563349>)
AnnotationAssertion(oboInOwl:creation_date obo:CL_2000084 "2014-12-02T19:28:38Z"^^xsd:dateTime)
AnnotationAssertion(oboInOwl:id obo:CL_2000084 "CL:2000084")
AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:31734511") Annotation(oboInOwl:hasSynonymType obo:OMO_0003000) oboInOwl:hasRelatedSynonym obo:CL_2000084 "CGC")
AnnotationAssertion(rdfs:label obo:CL_2000084 "conjunctiva goblet cell")
EquivalentClasses(obo:CL_2000084 ObjectIntersectionOf(obo:CL_0000160 ObjectSomeValuesFrom(obo:BFO_0000050 obo:UBERON_0001811)))
EquivalentClasses(obo:CL_2000084 ObjectIntersectionOf(obo:CL_0000160 ObjectSomeValuesFrom(obo:BFO_0000050 obo:UBERON_0006763)))

# Class: obo:CL_2000085 (mononuclear cell of umbilical cord)

Expand Down