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change palloc to malloc for external indexing #1023

change palloc to malloc for external indexing

change palloc to malloc for external indexing #1023

Workflow file for this run

name: test
on:
push:
branches:
- main
- dev
pull_request:
branches:
- main
- dev
workflow_dispatch:
inputs:
debug_enabled:
type: boolean
description: "Run the build with tmate debugging enabled (https://github.com/marketplace/actions/debugging-with-tmate)"
required: false
default: false
jobs:
test:
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: [ubuntu-22.04, ubicloud-standard-2-arm, macos-13]
postgres: [11, 12, 13, 14, 15, 16]
steps:
- uses: actions/checkout@v4
with:
# fetch-depth ensures all tags are present on the repo so we can run update tests successfully
fetch-depth: 0
submodules: "recursive"
- name: Build without SSL
id: build_without_ssl
run: sudo sh -c "USE_SSL=0 PG_VERSION=$PG_VERSION USE_SOURCE=1 GITHUB_OUTPUT=$GITHUB_OUTPUT INSTALL_CLI=1 ./ci/scripts/build.sh"
env:
PG_VERSION: ${{ matrix.postgres }}
BRANCH_NAME: ${{ github.head_ref || github.ref_name }}
# Enable tmate debugging of manually-triggered workflows if the input option was provided
- name: Setup tmate session
uses: mxschmitt/action-tmate@v3
if: ${{ github.event_name == 'workflow_dispatch' && inputs.debug_enabled }}
- name: Run tests linux without SSL
id: test-linux-without-ssl
run: sudo su postgres -c "PG_VERSION=$PG_VERSION ./ci/scripts/run-tests-linux.sh"
env:
PG_VERSION: ${{ matrix.postgres }}
if: ${{ !startsWith(matrix.os, 'mac') }}
- name: Run integration tests linux without SSL
id: integration-test-linux-without-ssl
run: |
# pytest tries to open files with full path and so 'work' home folder must be listable by postgres for it to work
sudo chmod +x /home/runner && \
sudo su postgres -c "LANTERN_CLI_PATH=${{ env.LANTERN_CLI_PATH }} USE_SSL=0 /tmp/lantern/cienv/bin/python ./scripts/integration_tests.py -k external_index" &&\
echo "Done with integration tests"
env:
PG_VERSION: ${{ matrix.postgres }}
if: ${{ !startsWith(matrix.os, 'mac') }}
- name: Build
id: build
run: sudo sh -c "USE_SSL=1 PG_VERSION=$PG_VERSION USE_SOURCE=1 GITHUB_OUTPUT=$GITHUB_OUTPUT ENABLE_COVERAGE=$ENABLE_COVERAGE ./ci/scripts/build.sh"
env:
PG_VERSION: ${{ matrix.postgres }}
BRANCH_NAME: ${{ github.head_ref || github.ref_name }}
ENABLE_COVERAGE: ${{ (startsWith(matrix.os, 'ubuntu') && matrix.postgres == 15) && '1' || '0' }}
- name: Run tests linux
id: test-linux
run: sudo su postgres -c "PG_VERSION=$PG_VERSION ./ci/scripts/run-tests-linux.sh"
env:
PG_VERSION: ${{ matrix.postgres }}
ENABLE_COVERAGE: ${{ (startsWith(matrix.os, 'ubuntu') && matrix.postgres == 15) && '1' || '0' }}
if: ${{ !startsWith(matrix.os, 'mac') }}
# integration tests
- name: Set LANTERN_CLI_PATH variable
run: echo "LANTERN_CLI_PATH=/tmp/bin/lantern-cli" >> $GITHUB_ENV
if: ${{ !startsWith(matrix.os, 'mac') }}
- name: Run integration tests linux
id: integration-test-linux
run: |
# pytest tries to open files with full path and so 'work' home folder must be listable by postgres for it to work
sudo fuser -k 8998/tcp || true 2>/dev/null # kill previously started cli
sudo chmod +x /home/runner && \
sudo su postgres -c "LANTERN_CLI_PATH=${{ env.LANTERN_CLI_PATH }} USE_SSL=1 /tmp/lantern/cienv/bin/python ./scripts/integration_tests.py" &&\
echo "Done with integration tests"
env:
PG_VERSION: ${{ matrix.postgres }}
if: ${{ !startsWith(matrix.os, 'mac') }}
- name: Collect coverage files
id: collect-cov-files
run: sudo su postgres -c "cd /tmp/lantern/build && make cover"
if: ${{ startsWith(matrix.os, 'ubuntu') && matrix.postgres == 15 }}
- name: Run update tests linux
id: update-test-linux
run: |
# Start postgres
sudo su postgres -c "PG_VERSION=$PG_VERSION RUN_TESTS=0 ./ci/scripts/run-tests-linux.sh" && \
sudo su -c "PG_VERSION=$PG_VERSION /tmp/lantern/cienv/bin/python ./scripts/test_updates.py -U postgres" &&\
echo "Done with updates"
env:
PG_VERSION: ${{ matrix.postgres }}
if: ${{ !startsWith(matrix.os, 'mac') }}
- name: Run catalog update checks
id: catalog-update-test-linux
run: |
sudo su postgres -c "PG_VERSION=$PG_VERSION RUN_TESTS=0 ./ci/scripts/run-tests-linux.sh" && \
sudo su -c "PG_VERSION=$PG_VERSION DATABASE_URL='postgresql://postgres@localhost:5432/postgres' ruby ./scripts/test_updates/main.rb test lantern" &&\
echo "Done catalog update checks"
env:
PG_VERSION: ${{ matrix.postgres }}
if: ${{ !startsWith(matrix.os, 'mac') }}
- name: Run tests mac
id: test-mac
run: ./ci/scripts/run-tests-mac.sh
env:
PG_VERSION: ${{ matrix.postgres }}
# postgresql@11 seems broken on brew on Ventura used in the runner https://github.com/orgs/Homebrew/discussions/5263
if: ${{ startsWith(matrix.os, 'mac') && matrix.postgres != 11 }}
- name: Run integration tests mac
id: integration-test-mac
run: |
PATH="/usr/local/opt/postgresql@${PG_VERSION}/bin:$PATH" /tmp/lantern/cienv/bin/python ./scripts/integration_tests.py &&\
echo "Done with integration tests"
env:
PG_VERSION: ${{ matrix.postgres }}
if: ${{ startsWith(matrix.os, 'mac') && matrix.postgres != 11 }}
- name: Upload Postgres logs
if: failure()
uses: actions/upload-artifact@v4
with:
name: postgres-server-${{ matrix.os }}-${{ matrix.postgres }}-logs
path: |
/tmp/pg-out.log
/tmp/pg-error.log
- name: Upload to codecov
uses: codecov/codecov-action@v4
env:
codecov_token: ${{ secrets.CODECOV_TOKEN }}
if: ${{ env.codecov_token != '' && startsWith(matrix.os, 'ubuntu') && matrix.postgres == 15 }} # for now run only on once
with:
token: ${{ secrets.CODECOV_TOKEN }}
name: codecov-lanterndb
fail_ci_if_error: true
directory: /tmp/lantern/build/
file: ./coverage.info
- name: Check clang formatting
run: "cd /tmp/lantern/build && make format_check"