General chnages to make the code more portable

In particular central inc folder included in all php scripts via include.inc.php sym links Added more parameterization for BASH scripts --HG-- rename : 4store/scripts/sqs_help.txt => 4store/scripts/sqs_help.sh rename : 4store/README => README rename : http/inc/4storefunc.inc.php => inc/4storefunc.inc.php rename : rdfgen/inc/atomfunc.inc.php => inc/atomfunc.inc.php rename : http/inc/changeddata.inc.php => inc/changeddata.inc.php rename : rdfgen/inc/data.inc.php => inc/data.inc.php rename : rdfgen/inc/datatypes.inc.php => inc/datatypes.inc.php rename : rdfgen/inc/defaultsettings.inc.php => inc/defaultsettings.inc.php rename : http/inc/footer.inc.php => inc/footer.inc.php rename : rdfgen/inc/functions.inc.php => inc/functions.inc.php rename : rdfgen/inc/genrdf.inc.php => inc/genrdf.inc.php rename : http/inc/header.inc.php => inc/header.inc.php rename : rdfgen/inc/miscfunc.inc.php => inc/miscfunc.inc.php rename : http/inc/ontconnect.inc.php => inc/ontoconnect.inc.php rename : rdfgen/inc/orefunc.inc.php => inc/orefunc.inc.php rename : http/inc/owl_specqueries.inc.php => inc/owl_specqueries.inc.php rename : http/inc/rdfs_specqueries.inc.php => inc/rdfs_specqueries.inc.php rename : rdfgen/inc/snarmfunc.inc.php => inc/snarmfunc.inc.php rename : http/inc/sq_connect.inc.php => inc/sparqlconnect.inc.php rename : http/inc/specfooter.inc.php => inc/specfooter.inc.php rename : http/inc/specheader.inc.php => inc/specheader.inc.php rename : http/inc/specqueries.inc.php => inc/specqueries.inc.php rename : rdfgen/inc/sqlfunc.inc.php => inc/sqlfunc.inc.php rename : http/inc/xmlfunc.inc.php => inc/xmlfunc.inc.php rename : rdfgen/inc/datatypes.txt => rdfgen/datatypes.txt
it-innovation · May 23, 2010 · b81725f · b81725f
1 parent 99e14fd
commit b81725f
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Showing 69 changed files with 443 additions and 1,057 deletions.
diff --git a/.hgignore b/.hgignore
@@ -2,8 +2,5 @@ syntax: glob
 *.log
 *.pid
 *~
-http/inc/settings.inc.php
-http/inc/connect.inc.php
-rdfgen/inc/settings.inc.php
-rdfgen/inc/connect.inc.php
+inc/settings.inc.php
 
diff --git a/4store/scripts/CreateLogFiles.sh b/4store/scripts/CreateLogFiles.sh
@@ -1,17 +1,14 @@
 #!/bin/bash
-cd /var/4store/log
+export settings.sh
+cd $STORE4_PATH/log
 touch database.log
-touch myexp_private_4store.log
-touch myexp_private_triples.log
-touch myexp_private_sparql.log
-touch myexp_private_update_time.log
-touch myexp_public_4store.log
-touch myexp_public_triples.log
-touch myexp_public_sparql.log
-touch myexp_public_update_time.log
+touch $TRIPLESTORE"_4store.log"
+touch $TRIPLESTORE"_triples.log"
+touch $TRIPLESTORE"_sparql.log"
+touch $TRIPLESTORE"_updatedlog"
+touch $TRIPLESTORE"_update_time.log"
 touch ontologies_4store.log
 touch ontologies_triples.log
 touch ontologies_sparql.log
+touch ontologies_updated.log
 touch ontologies_update_time.log
-
-
diff --git a/4store/scripts/cacheSpec.sh b/4store/scripts/cacheSpec.sh
@@ -1,17 +1,15 @@
 #!/bin/bash
-JENALIB="/var/4store/lib";
-JAVA_CP=".:$JENALIB/jena.jar:$JENALIB/iri.jar:$JENALIB/arq.jar:$JENALIB/xercesImpl.jar:$JENALIB/xml-apis.jar:$JENALIB/icu4j_3_4.jar:$JENALIB/json.jar:$JENALIB/concurrent.jar:$JENALIB/antlr-2.7.5.jar:$JENALIB/junit.jar:$JENALIB/log4j-1.2.12.jar:$JENALIB/wstx-asl-3.0.0.jar:$JENALIB/stax-api-1.0.jar:$JENALIB/mysql-connector-java-5.0.8-bin.jar:$JENALIB/commons-logging-1.1.1.jar:$JENALIB/commons-logging-1.1.1-javadoc.jar:$JENALIB/commons-logging-1.1.1-sources.jar:$JENALIB/commons-logging-adapters-1.1.1.jar:$JENALIB/commons-logging-api-1.1.1.jar:$JENALIB/commons-logging-tests.jar:$JENALIB/axis.jar:$JENALIB/bcpg-jdk15-139.jar:$JENALIB/bcprov-jdk15-139.jar:$JENALIB/commons-lang-2.0.jar:$JENALIB/grddl.jar:$JENALIB/hsqldb-1.8.0.7.jar:$JENALIB/jakarta-oro-2.0.5.jar:$JENALIB/nekohtml.jar:$JENALIB/ng4j.jar:$JENALIB/saxon8.jar:$JENALIB/tagsoup-1.0.4.jar:";
-
-cd /var/4store/scripts
+source settings.sh
+cd $STORE4_PATH/scripts
 echo "============== `date` =============="
-wget -O /var/data/ontologies/cachedspec/$3_$2_spec.html -q "http://rdf.myexperiment.org/generic/spec?ontology=$3&uncached=1"
-errors=`grep '<!-- Errors -->' /var/data/ontologies/cachedspec/$3_$2_spec.html`
-errors2=`grep 'XML error: Empty document at line ' /var/data/ontologies/cachedspec/$3_$2_spec.html`
+wget -O $DATA_PATH/ontologies/cachedspec/$3_$2_spec.html -q "$HTTPRDF_PATH/generic/spec?ontology=$3&uncached=1"
+errors=`grep '<!-- Errors -->' $DATA_PATH/ontologies/cachedspec/$3_$2_spec.html`
+errors2=`grep 'XML error: Empty document at line ' $DATA_PATH/ontologies/cachedspec/$3_$2_spec.html`
 if [ ${#errors} -gt 0 ]; then
-        echo "[`date +%T`] Cached spec of $1 at /var/data/ontologies/cachedspec/$3_$2_spec.html <b>with Query Failures</b>";
+        echo "[`date +%T`] Cached spec of $1 at $DATA_PATH/ontologies/cachedspec/$3_$2_spec.html <b>with Query Failures</b>";
 elif [ ${#errors2} -gt 0 ]; then
         echo "[`date +%T`] XML Error prevented $1 from being cached properly";
 else
-        echo "[`date +%T`] Cached spec of $1 at /var/data/ontologies/cachedspec/$3_$2_spec.html";
+        echo "[`date +%T`] Cached spec of $1 at $DATA_PATH/ontologies/cachedspec/$3_$2_spec.html";
 fi
 echo "[`date +%T`] Finished";
diff --git a/4store/scripts/changeddata.php b/4store/scripts/changeddata.php
@@ -1,28 +1,22 @@
 #!/usr/bin/php
 <?php
-	if ($argv[1]=="myexp_private"){
-		$domain="private";
-		$ts=$argv[1];
-	}
-	else{
-		$domain="public";
-		$ts="myexp_public";
-	}
-	$start=2;
-
-	include('seetings.inc.php');
+	include('include.inc.php');
 	include('changeddata.inc.php');
-	include('genxml.inc.php');
+	include('genrdf.inc.php');
+	$domain="public";
+        $ts=$triplestore;
+        $start=2;
+
 
 	function saveEntities($ts,$type,$xml,$id,$userid,$hasuserid,$fileext=null){
-		global $curids;
+		global $curids, $datapath;
 		$xml.=pagefooter();
                 if ($hasuserid) $fid=$userid;
                 else $fid=$id;
 		if ($fileext && $fileext!="_") $fid.="_$fileext";
 		$curids[]=$fid;
-                $file="/var/data/tmp/$ts/".getGroup($type)."/$fid";
-		$fileold="/var/data/$ts/".getGroup($type)."/$fid";
+                $file=$datapath."tmp/$ts/".getGroup($type)."/$fid";
+		$fileold=$datapath.$ts"/".getGroup($type)."/$fid";
                 $fh=fopen($file,'w');
                 fwrite($fh,$xml);
                 fclose($fh);
@@ -38,12 +32,9 @@ function saveEntities($ts,$type,$xml,$id,$userid,$hasuserid,$fileext=null){
                 }
 	}
 	$cdsql=$sql;
-	$fh=fopen("/var/data/tmp/$ts/delete_files",'w');
+	$fh=fopen($datapath."tmp/$ts/delete_files",'w');
 	fclose($fh);
-	$useuid=array('Downloads','Viewings');
-	unset($cdsql['Downloads']);
-	unset($cdsql['Viewings']);
-	$sepusage=array('Workflow','Pack','File');
+	$sepusage=array('workflows','packs','files');
 	if (sizeof($argv)>$start){
 		$newcsql=array();
 		for ($a=$start; $a<sizeof($argv); $a++){
@@ -64,7 +55,6 @@ function saveEntities($ts,$type,$xml,$id,$userid,$hasuserid,$fileext=null){
 		$fileno=1;
 		$curuserid="";
 		$curcontrib="";
-//		echo $rows;
 		for ($i=0; $i<$rows; $i++){
 			$row=mysql_fetch_assoc($res);
 			if ($insepusage==1){
@@ -75,7 +65,6 @@ function saveEntities($ts,$type,$xml,$id,$userid,$hasuserid,$fileext=null){
 			if (!$row['user_id']) $row['user_id']="AnonymousUser";
 			if (!$curuserid) $curuserid=$row['user_id'];
 			if (!$curcontrib) $curcontrib=$row['contributable_type']."_".$row['contributable_id'];
-			//print_r($currow);
 			if (!$inuseuid || $row['user_id']!=$curuserid){		
 				if (!in_array($k,$useuid)){
 					$xml.=printEntity($row,$k,$mappings[$k],"$datauri$k/",'id','');
@@ -128,17 +117,17 @@ function saveEntities($ts,$type,$xml,$id,$userid,$hasuserid,$fileext=null){
 				$urow=mysql_fetch_assoc($ures);
 				$uxml.=printUsage($k,$urow['id'],$urow['viewings_count'],$urow['downloads_count']);
 			}
-			saveEntities($ts,$k,$uxml,'Usage','','');	
+			saveEntities($ts,$k,$uxml,'usage','','');	
 		}
-		$ph=popen("/var/jena/scripts/sqs.sh $ts list-graphs | grep '/".getGroup($k)."/' | grep '[0-9]'",'r');
+		$ph=popen($ldpath."4store/scripts/sqs.sh $ts list-graphs | grep '/".getGroup($k)."/' | grep '[0-9]'",'r');
 		$fnums=array();
 		while (!feof($ph)){
 			$curf=fgets($ph,8192);
 			$curfb=explode("/",$curf);
 			if(strlen(trim($curfb[sizeof($curfb)-1]))>0) $fnums[]=trim($curfb[sizeof($curfb)-1]);
 		}
 		pclose($ph);
-		$ph=popen("ls /var/data/$ts/".getGroup($k)."/ | grep '[0-9]'",'r');
+		$ph=popen("ls $datapath$ts/".getGroup($k)."/ | grep '[0-9]'",'r');
 		$fnums2=array();
                 while (!feof($ph)){
                         $curf=fgets($ph,8192);
@@ -147,25 +136,19 @@ function saveEntities($ts,$type,$xml,$id,$userid,$hasuserid,$fileext=null){
                 pclose($ph);
 		$dels=array_diff($fnums,$curids);
 		$dels2=array_diff($fnums2,$curids);
-/*		for ($d=0; $d<max(sizeof($curids),sizeof($dels),sizeof($dels2)); $d++){
-			echo $curids[$d].",".$dels[$d].",".$dels2[$d]."\n";
-		}*/
 		foreach ($dels2 as $d2){
 			if (!in_array($d2,$dels)) $dels[]=$d2;
 		}
-//		print_r($curid);
-	//	echo "\n#####\n";
-//		print_r($dels);
 		if (is_array($dels)){
-			$fh=fopen("/var/data/tmp/$ts/delete_files",'a');
+			$fh=fopen($datapath."tmp/$ts/delete_files",'a');
 			foreach ($dels as $del){
-				$filedel="/var/data/$ts/".getGroup($k)."/$del\n";
+				$filedel="$datapath$ts/".getGroup($k)."/$del\n";
 	        	        fwrite($fh,$filedel);
 			}
 			fclose($fh);
 		}
 	}
-	$fh=fopen("/var/jena/log/".$ts."_updated.log","w");
+	$fh=fopen($ldpath."4store/log/".$ts."_updated.log","w");
 	$lastupdated=mktime(0,0,0)-120;
 	fwrite($fh,$lastupdated);
 	fclose($fh);	

diff --git a/4store/scripts/datadump.php b/4store/scripts/datadump.php
@@ -1,24 +1,17 @@
 #!/usr/bin/php
 <?php
-	if ($argv[1]=="myexp_private"){
-		$domain="private";
-		$ts=$argv[1];
-	}
-	else{
-		$domain="public";
-		$ts="myexp_public";
-	}
+	$domain="public";
+	$ts="myexp_public";
+
+	include('include.inc.php');
+        include('changeddata.inc.php');
+        include('genrdf.inc.php');
+
 	$start=2;
-	$rdffile="/var/data/tmp/$ts/data.rdf";
-	$rdfgzfile="/var/data/$ts/data.rdf.gz";
+	$rdffile=$datapath."tmp/$ts/data.rdf";
+	$rdfgzfile="$datapath$ts/data.rdf.gz";
 
-	ini_set('include_path','/var/www/html/rdf/inc/');
-	include('changeddata.inc.php');
-	include('genxml.inc.php');
-
 	$ddsql=$sql;
-	unset($ddsql['Downloads']);
-	unset($ddsql['Viewings']);
 	echo "[".date("H:i:s")."] Creating temporary file $rdffile\n";
 	$fh=fopen($rdffile,"w");
 	fwrite($fh,pageheader());
@@ -44,8 +37,8 @@
 	        fwrite($fh,$xml);
 	}
 	fclose($fh);
- 	echo "[".date("H:i:s")."] Adding Dataflows\n";
-	exec("for dffile in `ls /var/data/dataflows/rdf/*`; do
+ 	echo "[".date("H:i:s")."] Adding dataflows\n";
+	exec("for dffile in `ls ".$datapath."dataflows/rdf/*`; do
         head -$[`wc -l \$dffile | awk 'BEGIN{FS=\" \"}{print $1}'`] \$dffile | tail -$[`wc -l \$dffile | awk 'BEGIN{FS=\" \"}{print $1}'`-46] >> $rdffile
 done");
 	$fh=fopen($rdffile,"a");

diff --git a/4store/scripts/generateDataflowRDF.php b/4store/scripts/generateDataflowRDF.php
@@ -1,9 +1,9 @@
 #!/usr/bin/php
 <?php
-	ini_set('include_path','/var/www/html/rdf/inc');
-	include('genxml.inc.php');
-	$ph=popen('ls /var/data/dataflows/xml/','r');
-	$ph2=popen('ls /var/data/dataflows/reasoned/','r');
+	include('include.inc.php');
+	include('genrdf.inc.php');
+	$ph=popen('ls '.$datapath.'dataflows/xml/','r');
+	$ph2=popen('ls '.$datapath.'dataflows/reasoned/','r');
 	$temp="";
 	while (!feof($ph)){
 		$temp.=fread($ph,8192);
@@ -23,19 +23,19 @@
 	//$xmlfiles=array('542');
 	foreach ($xmlfiles as $xf){
 		if (!in_array($xf,$resfiles)){
-			$xmllines=file("/var/data/dataflows/xml/$xf");
+			$xmllines=file($datapath."dataflows/xml/$xf");
 			if (sizeof($xmllines)<=2){
-					exec("rm /var/data/$argv[1]/reasoned/$xf /var/data/dataflows/rdf/$xf  2> /dev/null");
-					if ($argv[1]=="myexp_public") fwrite($dellist,"/var/data/$argv[1]/dataflows/$xf\n");
+					exec("rm $datapath$argv[1]/reasoned/$xf ".$datapath."dataflows/rdf/$xf  2> /dev/null");
+					if ($argv[1]=="myexp_public") fwrite($dellist,"$datapath$argv[1]/dataflows/$xf\n");
 			}
 			else{
 				$dataflows=pageheader();
 				$dataflows.=getDataflowComponents(array('id'=>$xf),"workflow_versions","uris");
 				$dataflows.=pagefooter();
-				$fh=fopen("/var/data/dataflows/rdf/$xf",'w');
+				$fh=fopen($datapath."dataflows/rdf/$xf",'w');
 	                        fwrite($fh,$dataflows);
         	                fclose($fh);
-				fwrite($fhlist,"/var/data/dataflows/rdf/$xf\n");
+				fwrite($fhlist,$datapath."dataflows/rdf/$xf\n");
 				echo "[".date("H:i:s")."] Generated RDF for components of workflow_versions $xf\n";
 			}
 		}

diff --git a/4store/scripts/getDateFromFilename.php b/4store/scripts/getDateFromFilename.php
@@ -1,7 +1,7 @@
 #!/usr/bin/php
 <?php
-
-	$lines=@file('/var/data/log/'.$argv[1].'_update_time.log');
+	include('include.inc.php');	
+	$lines=@file($ldpath."4store/log/".$argv[1].'_update_time.log');
 	$lastupdated=$lines[0];
 	$filetimes=@file("php://stdin");
 	foreach ($filetimes as $filetime){

diff --git a/4store/scripts/getNewWorkflowVersions.php b/4store/scripts/getNewWorkflowVersions.php
@@ -1,15 +1,15 @@
 #!/usr/bin/php
 <?php
-	include('/var/www/html/rdf/inc/connect.inc.php');
-	//$sql="select workflow_versions.id, workflow_versions.workflow_id, workflow_versions.version from workflow_versions inner join contributions on workflow_versions.workflow_id=contributions.contributable_id and contributions.contributable_type='Workflow' inner join policies on contributions.policy_id=policies.id where content_type='application/vnd.taverna.scufl+xml' and policies.share_mode in (0,1,2)";
+	include('include.inc.php');
+	include('myexpconnect.inc.php');
 	$sql="select workflow_versions.id, workflow_versions.workflow_id, workflow_versions.version from workflow_versions inner join content_types on workflow_versions.content_type_id=content_types.id inner join contributions on workflow_versions.workflow_id=contributions.contributable_id and contributions.contributable_type='Workflow' inner join policies on contributions.policy_id=policies.id where content_types.mime_type in ('application/vnd.taverna.scufl+xml','application/vnd.taverna.t2flow+xml') and policies.share_mode in (0,1,2)";
 	$res=mysql_query($sql);
 	for ($i=0; $i<mysql_num_rows($res); $i++){
 		$wfv_db[]=mysql_result($res,$i,'id');
 		$wfv_wv[]=mysql_result($res,$i,'id').",".mysql_result($res,$i,'workflow_id').",".mysql_result($res,$i,'version');
 
 	}
-	$cmd="ls /var/data/dataflows/xml/";
+	$cmd="ls ".$datapath."/dataflows/xml/";
 	$ph=popen($cmd,'r');
 	$lswfv="";
 	while (!feof($ph)){

diff --git a/4store/scripts/getUpdatedFiles.php b/4store/scripts/getUpdatedFiles.php
@@ -1,7 +1,7 @@
 #!/usr/bin/php
 <?php
 
-	$lines=@file('/var/data/log/'.$argv[1].'_update_time.log');
+	$lines=@file($ldpath.'4store/log/'.$argv[1].'_update_time.log');
 	$lastupdated=$lines[0];
 	$filetimes=@file("php://stdin");
 	foreach ($filetimes as $filetime){

diff --git a/4store/scripts/getdataflows.sh b/4store/scripts/getdataflows.sh
@@ -1,11 +1,11 @@
 #!/bin/bash
-cd /var/jena/code/
-/usr/bin/php ../scripts/getNewWorkflowVersions.php | awk 'BEGIN{FS=","}{ print " -O /var/data/dataflows/xml/" $1 " -q http://www.myexperiment.org/workflow.xml?id=" $2 "&version=" $3 "&elements=components" }' > /tmp/wgets.txt
+source settings.sh
+cd $STORE4_PATH/scripts
+/usr/bin/php getNewWorkflowVersions.php | awk -v datapath="$DATA_PATH" -v httpwwwpath="$HTTPWWW_PATH" 'BEGIN{FS=","}{ print " -O " datapath "/dataflows/xml/" $1 " -q " httpwwwpath "/workflow.xml?id=" $2 "&version=" $3 "&elements=components" }' > /tmp/wgets.txt
 exec</tmp/wgets.txt
 while read line
 do
 	wget $line
 	echo "[`date +%T`] Executed wget $line"
-	#sleep 2 
 done	
 
diff --git a/4store/scripts/include.inc.php b/4store/scripts/include.inc.php
@@ -0,0 +1 @@
+../../include.inc.php
diff --git a/4store/scripts/listGraphs.php b/4store/scripts/listGraphs.php
@@ -1,6 +1,7 @@
 #!/usr/bin/php 
 <?php
-	include('/var/www/html/rdf/inc/xmlfunc.inc.php');
+	include('include.inc.php');
+	include('xmlfunc.inc.php');
 	if (!$argv[1]) die("No Knowledge Base specified!\n");
 	$query="4s-query $argv[1] ".'"select distinct ?g where { graph ?g {?s ?p ?o} }"';
 	$ph=popen($query,'r');

diff --git a/4store/scripts/processRemoteOntology.php b/4store/scripts/processRemoteOntology.php
@@ -1,11 +1,11 @@
 <?php
-	ini_set('include_path','/var/www/html/rdf/inc');
+	include('include.inc.php');
 	include('xmlfunc.inc.php');
-	include('ontconnect.inc.php');
+	include('ontoconnect.inc.php');
 	$sql="select * from ontologies where id=$argv[1]";
 	$res=mysql_query($sql);
 	$ont=mysql_fetch_assoc($res);
-	$fh=fopen("/var/data/ontologies/remoteont/$argv[1]_$ont[name].owl",'r');
+	$fh=fopen($datapath."ontologies/remoteont/$argv[1]_$ont[name].owl",'r');
 	$xml="";
 	while (!feof($fh)){
 		$data=fgets($fh,8096);

diff --git a/4store/scripts/reasonDataflows.sh b/4store/scripts/reasonDataflows.sh
@@ -1,16 +1,15 @@
 #!/bin/bash
-cd /var/4store/code
+source settings.sh
+cd $STORE4_PATH/code
 LC_ALL=c
-JENALIB="/var/4store/lib";
-JAVA_CP=".:$JENALIB/jena.jar:$JENALIB/iri.jar:$JENALIB/arq.jar:$JENALIB/xercesImpl.jar:$JENALIB/xml-apis.jar:$JENALIB/icu4j_3_4.jar:$JENALIB/json.jar:$JENALIB/concurrent.jar:$JENALIB/antlr-2.7.5.jar:$JENALIB/junit.jar:$JENALIB/log4j-1.2.12.jar:$JENALIB/wstx-asl-3.0.0.jar:$JENALIB/stax-api-1.0.jar:$JENALIB/mysql-connector-java-5.0.8-bin.jar:$JENALIB/commons-logging-1.1.1.jar:$JENALIB/commons-logging-1.1.1-javadoc.jar:$JENALIB/commons-logging-1.1.1-sources.jar:$JENALIB/commons-logging-adapters-1.1.1.jar:$JENALIB/commons-logging-api-1.1.1.jar:$JENALIB/commons-logging-tests.jar:$JENALIB/axis.jar:$JENALIB/bcpg-jdk15-139.jar:$JENALIB/bcprov-jdk15-139.jar:$JENALIB/commons-lang-2.0.jar:$JENALIB/grddl.jar:$JENALIB/hsqldb-1.8.0.7.jar:$JENALIB/jakarta-oro-2.0.5.jar:$JENALIB/nekohtml.jar:$JENALIB/ng4j.jar:$JENALIB/saxon8.jar:$JENALIB/tagsoup-1.0.4.jar:";
 
 echo "[`date +%T`] Generating Dataflow RDF"
-/usr/bin/php ../scripts/generateDataflowRDF.php $1
+$PHPEXEC_PATH/php $STORE4_PATH/scripts/generateDataflowRDF.php $1
 if [ `cat /tmp/dataflows.txt | wc -l` -gt 0 ]; then
 	echo "[`date +%T`] Reasoning Dataflow RDF"
-	java -cp $JAVA_CP RDFSDataReasoner ../config/myexp_public_ontologies.txt /tmp/dataflows.txt /var/data/dataflows/reasoned/
+	java -cp $JAVA_CP RDFSDataReasoner $STORE4_PATH/config/myexp_public_ontologies.txt /tmp/dataflows.txt $DATA_PATH/dataflows/reasoned/
 	echo "[`date +%T`] Reasoned Dataflow RDF"
 else
-	 echo "[`date +%T`] No Dataflow RDF to reason"
+	echo "[`date +%T`] No Dataflow RDF to reason"
 fi