Pipeline to assign body length-dry biomass allometry equations and other functional traits to a taxonomic name based on taxonomic hierarchy in freshwater invertebrates.
Warning
WIP
You can try to install it from GitHub, but as it's a WIP, it may or may not work depending on the tides, temperature, the color of your socks and what you had for dinner the day before yesterday.
To date, we transitively depend on terra, which may require additional installation steps (GDAL) on your OS. Please see the corresponding install section of their README first.
Now, if you feel lucky, try:
install_github("haganjam/InvAlloR")There's a devcontainer setup included. If you use VSC you should be prompted to open the project in a container automatically.
devtools are bundled with the devcontainer. Load library(devtools) and you
have load_all(), test() and check() ready at hand.
We use renv to provide reproducibility as far as it gets with R.
Use renv::snapshot() after changing dependencies, renv::restore() to install declared versions
of the dependencies and renv::update() to update to latest CRAN versions (before pushing to CRAN).