Release Notes:
- Tumour-only mode available for both SV and CNA calling
- Removes artefact foldback-inversion signal from nanopore reads (disable via --keep_inv_artefact)
- savana cna now runs independently of phasing information (i.e. the provided vcf file does not need to be phased anymore, as such the --phased_vcf flag has changed to --snp_vcf)
- For tumour only mode, or in absence of the snp vcf file, savana will use 1000g vcf data (via --g1000_vcf)
- Additional bugfixes and improvements