test_module_assembly.py

#!/usr/bin/env python
# -*- coding: utf-8 -*-

import pytest

def test_new_assembly(monkeypatch):
    monkeypatch.setenv("pydna_cached_funcs", "")
    from pydna.dseqrecord import Dseqrecord
    from pydna          import assembly
    from pydna.parsers  import parse
    from pydna.utils    import eq
    from importlib      import reload
    reload(assembly)
    
#                   0000000000111111111222222222233333333334444444444555555555566
#                   0123456780123456789012345678901234567890123456789012345678901             
#                   acgatgctatactggCCCCCtgtgctgtgctctaTTTTTtattctggctgtatctGGGGGT
    a = Dseqrecord("ACTACGGCCTTCTCTCCCCCtgtgctgtgctcta",name="one34")
    a.add_feature(1,33,label="first") # ||||||||||||||  
                                      # h0FkKjiojpATbfkOM0C3u4zg9hs
                                      # tgtgctgtgctcta 14
                                      # |||||||||||||| 
    b =                     Dseqrecord("tgtgctgtgctctaTTTTTtattctggctgtatct",name="two35")
    b.add_feature(1,34,label="scnd")                     # ||||||||||||||||
                                                         # gmfjuQLVSPP4ayjJMPuig1jxxmE
                                                         # tattctggctgtatct 16
                                                         # ||||||||||||||||
    c =                                        Dseqrecord("tattctggctgtatctGGGGGTacgatgctatactgg",name="three37")
    c.add_feature(1,36,label="third")
    ln0 = assembly.Assembly((a,b,c), limit=14)
    
    assert str(ln0.linear_products[0].seq)=='ACTACGGCCTTCTCTCCCCCtgtgctgtgctctaTTTTTtattctggctgtatctGGGGGTacgatgctatactgg'
    
    assert ln0.list_linear() == "0 Contig(-76) m9AkRq2TCOjLpcG5-3H2ScBEt0w"
    
    
    

    
    
    a = Dseqrecord("ACTACGGCCTTCTCTCCCCCtgtgctgtgctcta",name="one34")
    a.add_feature(1,33,label="first") # ||||||||||||||  
                                      # h0FkKjiojpATbfkOM0C3u4zg9hs
                                      # tgtgctgtgctcta 14
                                      # -------------- 
    b =                     Dseqrecord("agatacagccagaataAAAAAtagagcacagcaca",name="twoArc35")
                                      # tgtgctgtgctctaTTTTTtattctggctgtatct
    b.add_feature(1,34,label="scnd")                     #   --------------
                                                         # gmfjuQLVSPP4ayjJMPuig1jxxmE
                                                         # tattctggctgtatct 16 
    c =                                        Dseqrecord("tattctggctgtatctGGGGGTacgatgctatactgg",name="three37")
    c.add_feature(1,36,label="third")
    ln1 = assembly.Assembly((a,b,c), limit=14)
    #                                        ACTACGGCCTTCTCTCCCCCtgtgctgtgctctaTTTTT                     Tacgatgctatactgg
    #                                        ACTACGGCCTTCTCTCCCCCtgtgctgtgctctaTTTTTtattctggctgtatctGGGGGTacgatgctatactgg
    assert str(ln1.linear_products[0].seq)=='ACTACGGCCTTCTCTCCCCCtgtgctgtgctctaTTTTTtattctggctgtatctGGGGGTacgatgctatactgg'
    
    
    
    
    
    
    
    
    
    
    
    
    a = Dseqrecord("ACTACGGCCTTCTCTCCCCCtgtgctgtgctcta",name="one")
    a.add_feature(1,33,label="first")
                                      # h0FkKjiojpATbfkOM0C3u4zg9hs
                                      # tgtgctgtgctcta 14 
    b =                     Dseqrecord("tgtgctgtgctctaTTTTTtattctggctgtatct",name="twoA")
    b.add_feature(1,34,label="scnd")
    b2=                     Dseqrecord("tgtgctgtgctctaCCtattctggctgtatct",name="twoB")
                                                         # gmfjuQLVSPP4ayjJMPuig1jxxmE
                                                         # tattctggctgtatct 16 
    c =                                        Dseqrecord("tattctggctgtatctGGGGGTacgatgctatactgg",name="three")
    c.add_feature(1,36,label="third")
    ln2 = assembly.Assembly((a,b,b2,c), limit=14)
 
    assert str(ln2.linear_products[0].seq)=='ACTACGGCCTTCTCTCCCCCtgtgctgtgctctaTTTTTtattctggctgtatctGGGGGTacgatgctatactgg'
    assert str(ln2.linear_products[1].seq)=='ACTACGGCCTTCTCTCCCCCtgtgctgtgctctaCCtattctggctgtatctGGGGGTacgatgctatactgg'
    
    
    
    
    
    
    
    
    



    a = Dseqrecord("acgatgctatactggCCCCCtgtgctgtgctctaGG",name="oneC")
    a.add_feature(1,33,label="first")
                                      # h0FkKjiojpATbfkOM0C3u4zg9hs
                                      # tgtgctgtgctcta 14 
    b =                     Dseqrecord("tgtgctgtgctctaTTTTTtattctggctgtatct", name="twoA")
    b.add_feature(1,34,label="scnd")
                                                         # gmfjuQLVSPP4ayjJMPuig1jxxmE
                                                         # tattctggctgtatct 16 
    c =                                        Dseqrecord("tattctggctgtatctGGGGGTacgatgctatactgg",name="three37")
    c.add_feature(1,36,label="third")
                                                                               # VJtsIfDO2DkKXbW-sLF3nJ-AEe4
                                                                               # acgatgctatactgg 15
                                                                               
    c1 = assembly.Assembly((a,b,c), limit=14)
    assert c1.circular_products[0].cseguid() == "t3mIjxv3Q5GK9SWpXD-UfyefANc"
    assert str(c1.circular_products[0].seq)=='acgatgctatactggCCCCCtgtgctgtgctctaTTTTTtattctggctgtatctGGGGGT'
        
    assert c1.list_circular() == "0 Contig(o61) t3mIjxv3Q5GK9SWpXD-UfyefANc"

   
    a = Dseqrecord("acgatgctatactggCCCCCtgtgctgtgctctaGG",name="oneC")
    a.add_feature(1,33,label="first")
                                      # h0FkKjiojpATbfkOM0C3u4zg9hs
                                      # tgtgctgtgctcta 14 
    b =                     Dseqrecord("tgtgctgtgctctaTTTTTtattctggctgtatct", name="twoA")
    b.add_feature(1,34,label="scnd")
    b2=                     Dseqrecord("tgtgctgtgctctaCCtattctggctgtatct",name="twoB")
                                                         # gmfjuQLVSPP4ayjJMPuig1jxxmE
                                                         # tattctggctgtatct 16 
    c =                                        Dseqrecord("tattctggctgtatctGGGGGTacgatgctatactgg", name="three")
    c.add_feature(1,36,label="third")
                                                                               # VJtsIfDO2DkKXbW-sLF3nJ-AEe4
                                                                               # acgatgctatactgg 15
                                                                               
    c2 = assembly.Assembly((a,b,b2,c), limit=14)
    assert c2.circular_products[0].cseguid() == "t3mIjxv3Q5GK9SWpXD-UfyefANc"
    assert c2.circular_products[1].cseguid() == "k9ztaDj9HsQYZvxzvkUWn6SY5Ks"
    assert str(c2.circular_products[0].seq)=='acgatgctatactggCCCCCtgtgctgtgctctaTTTTTtattctggctgtatctGGGGGT'
    assert str(c2.circular_products[1].seq)=='acgatgctatactggCCCCCtgtgctgtgctctaCCtattctggctgtatctGGGGGT'

    
    
    

    
    
    
    
                  # VJtsIfDO2DkKXbW-sLF3nJ-AEe4
                  # acgatgctatactgg 15
    a = Dseqrecord("acgatgctatactggCCCCCtgtgctgtgctcta",name="oneC")

                                      # h0FkKjiojpATbfkOM0C3u4zg9hs
                                      # tgtgctgtgctcta 14 
    b =                     Dseqrecord("tgtgctgtgctctaTTTTTtattctggctgtatct", name="twoA")
    b.add_feature(1,34,label="scnd")
                                                         # gmfjuQLVSPP4ayjJMPuig1jxxmE
                                                         # tattctggctgtatct 16 
    c =                                        Dseqrecord("tattctggctgtatctGGGGGTacgatgctatactgg", name="three")
                                                                               # VJtsIfDO2DkKXbW-sLF3nJ-AEe4
                                                                               # acgatgctatactgg 15
                                                                               
    c3 = assembly.Assembly((a,b,c), limit=14)
    assert str(c3.circular_products[0].seq) == 'acgatgctatactggCCCCCtgtgctgtgctctaTTTTTtattctggctgtatctGGGGGT'


    from pydna.parsers  import parse
    from pydna.utils    import eq
    
    
    
    text1 = '''
    >A_AgTEFp_b_631 NP+geg/4Ykv2pIwEqiLylYKPYOE
    TCCTGACGGGTAATTTTGATTTGCATGCCGTCCGGGTGAGTCATAGCGTCTGGTTGTTTTGCCAGATTCAGCAGAGTCTGTGCAATGCGGCCGCTGACcacatacgatttaggtgacactatagaacGCGGCCGCCAGCTGAAGCTTCGTACGCTGCAGGTCGACGGATCCCCGGGTTAATTAAGGCGCGCCAGATCTGTTTAGCTTGCCTTGTCCCCGCCGGGTCACCCGGCCAGCGACATGGAGGCCCAGAATACCCTCCTTGACAGTCTTGACGTGCGCAGCTCAGGGGCATGATGTGACTGTCGCCCGTACATTTAGCCCATACATCCCCATGTATAATCATTTGCATCCATACATTTTGATGGCCGCACGGCGCGAAGCAAAAATTACGGCTCCTCGCTGCAGACCTGCGAGCAGGGAAACGCTCCCCTCACAGACGCGTTGAATTGTCCCCACGCCGCGCCCCTGTAGAGAAATATAAAAGGTTAGGATTTGCCACTGAGGTTCTTCTTTCATATACTTCCTTTTAAAATCTTGCTAGGATACAGTTCTCACATcacatccgaacataaacaaccGTCGAGGAACGCCAGGTTGCCCACTTTctcactagtgacctgcagccgAC
    
    >B_hph_c_740 k2IHgW5Q2jg2iEJq/l7jCnq2mKM
    gtcgaggaacgccaggttgcccactTTCTCACTAGTGACCTGCAGCCGACCCAAtcacatcacatccgaacataaacaaccatgGGTACCACTCTTGACGACACGGCTTACCGGTACCGCACCAGTGTCCCGGGGGACGCCGAGGCCATCGAGGCACTGGATGGGTCCTTCACCACCGACACCGTCTTCCGCGTCACCGCCACCGGGGACGGCTTCACCCTGCGGGAGGTGCCGGTGGACCCGCCCCTGACCAAGGTGTTCCCCGACGACGAATCGGACGACGAATCGGACGACGGGGAGGACGGCGACCCGGACTCCCGGACGTTCGTCGCGTACGGGGACGACGGCGACCTGGCGGGCTTCGTGGTCGTCTCGTACTCCGGCTGGAACCGCCGGCTGACCGTCGAGGACATCGAGGTCGCCCCGGAGCACCGGGGGCACGGGGTCGGGCGCGCGTTGATGGGGCTCGCGACGGAGTTCGCCCGCGAGCGGGGCGCCGGGCACCTCTGGCTGGAGGTCACCAACGTCAACGCACCGGCGATCCACGCGTACCGGCGGATGGGGTTCACCCTCTGCGGCCTGGACACCGCCCTGTACGACGGCACCGCCTCGGACGGCGAGCAGGCGCTCTACATGAGCATGCCCTGCCCCtaatcagtactgacaataaaaagattcttgTAGGGATAACAGGGTAATCGGAGTGCCAtctgtgcagacaaacgcatcaggatTTAAAT
    
    >C_KlLEU2tt_d_650 8lAwzHM60BkV1hhzx3/bBsfAIYo
    CGCGCCATCTGTGCAGACAAACGCATCAGGATagagtcttttgtaacgacccCGTCTCCACCAACTTGGTATGCTTGAAATCTCAAGGCCATTACACATTCAGTTATGTGAACGAAAGGTCTTTATTTAACGTAGCATAAACTAAATAATACAGGTTCCGGTTAGCCTGCAATGTGTTAAATCTAAAGGAGCATACCCAAAATGAACTGAAGACAAGGAAATTTGCTTGTCCAGATGTGATTGAGCATTTGAACGTTAATAACATAACATTTTTATACTTAACTATAGAAAGACTTGTATAAAAACTGGCAAACGAGATATTCTGAATATTGGTGCATATTTCAGGTAGAAAAGCTTACAAAACAATCTAATCATAATATTGAGATGAAGAGAAAGATAAAAGAAAAAACGATAAGTCAGATGAGATTATGATTGTACTTTGAAATCGAGGAACAAAGTATATACGGTAGTAGTTCCCCGAGTTATAACGGGAGATCATGTAAATTGAGAAACCAGATAAAGATTTGGTATGCACTCTAGCAAGAAAATAAAATGATGAATCTATGAtatagatcacttttgttccagcATCCGGATTTACCTGAATCAATTGGCGAAATTTTTTGTACGAAATTTCAGCCACTTCACAG
    '''
    
    list_of_formatted_seq_records = parse(text1)
    a=assembly.Assembly(list_of_formatted_seq_records, limit=25)
    
   
    candidate = a.linear_products[0]
    correct = 'TCCTGACGGGTAATTTTGATTTGCATGCCGTCCGGGTGAGTCATAGCGTCTGGTTGTTTTGCCAGATTCAGCAGAGTCTGTGCAATGCGGCCGCTGACcacatacgatttaggtgacactatagaacGCGGCCGCCAGCTGAAGCTTCGTACGCTGCAGGTCGACGGATCCCCGGGTTAATTAAGGCGCGCCAGATCTGTTTAGCTTGCCTTGTCCCCGCCGGGTCACCCGGCCAGCGACATGGAGGCCCAGAATACCCTCCTTGACAGTCTTGACGTGCGCAGCTCAGGGGCATGATGTGACTGTCGCCCGTACATTTAGCCCATACATCCCCATGTATAATCATTTGCATCCATACATTTTGATGGCCGCACGGCGCGAAGCAAAAATTACGGCTCCTCGCTGCAGACCTGCGAGCAGGGAAACGCTCCCCTCACAGACGCGTTGAATTGTCCCCACGCCGCGCCCCTGTAGAGAAATATAAAAGGTTAGGATTTGCCACTGAGGTTCTTCTTTCATATACTTCCTTTTAAAATCTTGCTAGGATACAGTTCTCACATcacatccgaacataaacaaccGTCGAGGAACGCCAGGTTGCCCACTTTctcactagtgacctgcagccgACCCAAtcacatcacatccgaacataaacaaccatgGGTACCACTCTTGACGACACGGCTTACCGGTACCGCACCAGTGTCCCGGGGGACGCCGAGGCCATCGAGGCACTGGATGGGTCCTTCACCACCGACACCGTCTTCCGCGTCACCGCCACCGGGGACGGCTTCACCCTGCGGGAGGTGCCGGTGGACCCGCCCCTGACCAAGGTGTTCCCCGACGACGAATCGGACGACGAATCGGACGACGGGGAGGACGGCGACCCGGACTCCCGGACGTTCGTCGCGTACGGGGACGACGGCGACCTGGCGGGCTTCGTGGTCGTCTCGTACTCCGGCTGGAACCGCCGGCTGACCGTCGAGGACATCGAGGTCGCCCCGGAGCACCGGGGGCACGGGGTCGGGCGCGCGTTGATGGGGCTCGCGACGGAGTTCGCCCGCGAGCGGGGCGCCGGGCACCTCTGGCTGGAGGTCACCAACGTCAACGCACCGGCGATCCACGCGTACCGGCGGATGGGGTTCACCCTCTGCGGCCTGGACACCGCCCTGTACGACGGCACCGCCTCGGACGGCGAGCAGGCGCTCTACATGAGCATGCCCTGCCCCtaatcagtactgacaataaaaagattcttgTAGGGATAACAGGGTAATCGGAGTGCCATCTGTGCAGACAAACGCATCAGGATagagtcttttgtaacgacccCGTCTCCACCAACTTGGTATGCTTGAAATCTCAAGGCCATTACACATTCAGTTATGTGAACGAAAGGTCTTTATTTAACGTAGCATAAACTAAATAATACAGGTTCCGGTTAGCCTGCAATGTGTTAAATCTAAAGGAGCATACCCAAAATGAACTGAAGACAAGGAAATTTGCTTGTCCAGATGTGATTGAGCATTTGAACGTTAATAACATAACATTTTTATACTTAACTATAGAAAGACTTGTATAAAAACTGGCAAACGAGATATTCTGAATATTGGTGCATATTTCAGGTAGAAAAGCTTACAAAACAATCTAATCATAATATTGAGATGAAGAGAAAGATAAAAGAAAAAACGATAAGTCAGATGAGATTATGATTGTACTTTGAAATCGAGGAACAAAGTATATACGGTAGTAGTTCCCCGAGTTATAACGGGAGATCATGTAAATTGAGAAACCAGATAAAGATTTGGTATGCACTCTAGCAAGAAAATAAAATGATGAATCTATGAtatagatcacttttgttccagcATCCGGATTTACCTGAATCAATTGGCGAAATTTTTTGTACGAAATTTCAGCCACTTCACAG'
    assert len(correct)==1933
    assert eq(correct,candidate, circular=False)

    #Assembly:
    #Sequences........................: [632] [740] [650]
    #Sequences with shared homologies.: [632] [740] [650]
    #Homology limit (bp)..............: 25
    #Number of overlaps...............: 3
    #Nodes in graph(incl. 5' & 3')....: 5
    #Only terminal overlaps...........: No
    #Circular products................: [81]
    #Linear products..................: [1933] [1852] [1352] [1321] [1240] [821] [713] [132] [51] [38]


def test_assembly(monkeypatch):
    monkeypatch.setenv("pydna_cached_funcs", "")
    from pydna import   assembly
    from pydna.parsers  import parse
    from pydna.utils    import eq
    from importlib      import reload
    reload(assembly)


    text1 = '''
    >A_AgTEFp_b_631 NP+geg/4Ykv2pIwEqiLylYKPYOE
    TCCTGACGGGTAATTTTGATTTGCATGCCGTCCGGGTGAGTCATAGCGTCTGGTTGTTTTGCCAGATTCAGCAGAGTCTGTGCAATGCGGCCGCTGACcacatacgatttaggtgacactatagaacGCGGCCGCCAGCTGAAGCTTCGTACGCTGCAGGTCGACGGATCCCCGGGTTAATTAAGGCGCGCCAGATCTGTTTAGCTTGCCTTGTCCCCGCCGGGTCACCCGGCCAGCGACATGGAGGCCCAGAATACCCTCCTTGACAGTCTTGACGTGCGCAGCTCAGGGGCATGATGTGACTGTCGCCCGTACATTTAGCCCATACATCCCCATGTATAATCATTTGCATCCATACATTTTGATGGCCGCACGGCGCGAAGCAAAAATTACGGCTCCTCGCTGCAGACCTGCGAGCAGGGAAACGCTCCCCTCACAGACGCGTTGAATTGTCCCCACGCCGCGCCCCTGTAGAGAAATATAAAAGGTTAGGATTTGCCACTGAGGTTCTTCTTTCATATACTTCCTTTTAAAATCTTGCTAGGATACAGTTCTCACATcacatccgaacataaacaaccGTCGAGGAACGCCAGGTTGCCCACTTTctcactagtgacctgcagccgAC'

    >B_hph_c_740 k2IHgW5Q2jg2iEJq/l7jCnq2mKM
    gtcgaggaacgccaggttgcccactTTCTCACTAGTGACCTGCAGCCGACCCAAtcacatcacatccgaacataaacaaccatgGGTACCACTCTTGACGACACGGCTTACCGGTACCGCACCAGTGTCCCGGGGGACGCCGAGGCCATCGAGGCACTGGATGGGTCCTTCACCACCGACACCGTCTTCCGCGTCACCGCCACCGGGGACGGCTTCACCCTGCGGGAGGTGCCGGTGGACCCGCCCCTGACCAAGGTGTTCCCCGACGACGAATCGGACGACGAATCGGACGACGGGGAGGACGGCGACCCGGACTCCCGGACGTTCGTCGCGTACGGGGACGACGGCGACCTGGCGGGCTTCGTGGTCGTCTCGTACTCCGGCTGGAACCGCCGGCTGACCGTCGAGGACATCGAGGTCGCCCCGGAGCACCGGGGGCACGGGGTCGGGCGCGCGTTGATGGGGCTCGCGACGGAGTTCGCCCGCGAGCGGGGCGCCGGGCACCTCTGGCTGGAGGTCACCAACGTCAACGCACCGGCGATCCACGCGTACCGGCGGATGGGGTTCACCCTCTGCGGCCTGGACACCGCCCTGTACGACGGCACCGCCTCGGACGGCGAGCAGGCGCTCTACATGAGCATGCCCTGCCCCtaatcagtactgacaataaaaagattcttgTAGGGATAACAGGGTAATCGGAGTGCCAtctgtgcagacaaacgcatcaggatTTAAAT

    >C_KlLEU2tt_d_650 8lAwzHM60BkV1hhzx3/bBsfAIYo
    CGCGCCATCTGTGCAGACAAACGCATCAGGATagagtcttttgtaacgacccCGTCTCCACCAACTTGGTATGCTTGAAATCTCAAGGCCATTACACATTCAGTTATGTGAACGAAAGGTCTTTATTTAACGTAGCATAAACTAAATAATACAGGTTCCGGTTAGCCTGCAATGTGTTAAATCTAAAGGAGCATACCCAAAATGAACTGAAGACAAGGAAATTTGCTTGTCCAGATGTGATTGAGCATTTGAACGTTAATAACATAACATTTTTATACTTAACTATAGAAAGACTTGTATAAAAACTGGCAAACGAGATATTCTGAATATTGGTGCATATTTCAGGTAGAAAAGCTTACAAAACAATCTAATCATAATATTGAGATGAAGAGAAAGATAAAAGAAAAAACGATAAGTCAGATGAGATTATGATTGTACTTTGAAATCGAGGAACAAAGTATATACGGTAGTAGTTCCCCGAGTTATAACGGGAGATCATGTAAATTGAGAAACCAGATAAAGATTTGGTATGCACTCTAGCAAGAAAATAAAATGATGAATCTATGAtatagatcacttttgttccagcATCCGGATTTACCTGAATCAATTGGCGAAATTTTTTGTACGAAATTTCAGCCACTTCACAG
    '''

    text2 = '''
    >693
    ttctagaactagtggatcccccgggctgcagatgagtgaaggccccgtcaaattcgaaaaaaataccgtcatatctgtctttggtgcgtcaggtgatctggcaaagaagaagacttttcccgccttatttgggcttttcagagaaggttaccttgatccatctaccaagatcttcggttatgcccggtccaaattgtccatggaggaggacctgaagtcccgtgtcctaccccacttgaaaaaacctcacggtgaagccgatgactctaaggtcgaacagttcttcaagatggtcagctacatttcgggaaattacgacacagatgaaggcttcgacgaattaagaacgcagatcgagaaattcgagaaaagtgccaacgtcgatgtcccacaccgtctcttctatctggccttgccgccaagcgtttttttgacggtggccaagcagatcaagagtcgtgtgtacgcagagaatggcatcacccgtgtaatcgtagagaaacctttcggccacgacctggcctctgccagggagctgcaaaaaaacctggggcccctctttaaagaagaagagttgtacagaattgaccattacttgggtaaagagttggtcaagaatcttttagtcttgaggttcggtaaccagtttttgaatgcctcgtggaatagagacaacattcaaagcgttcagat

    >934
    tatcgataagcttgatatcgaattcctgcagctaattatccttcgtatcttctggcttagtcacgggccaagcgtaagggtgcttttcgggcataacatacttgtgtttttgcatatattccttcaatccctttggacctcttgatccgtaggggtaaatttccggtgttggaccgtccggacgctctatgtgcttcagtaatggggtgaatatgccccaactgatatccaattcgtcatctctgacaaagttggaatggtcacccagtagggcgtctcttatcaacacctcgtaagcctctggaatccaaaagtcttggtacctgcttgcgtaagttagattcagatctgtgacttgggtagcatttgacagaccaggggtcttagcattaaactttaggtacacagcggcatcgggctgcactctgatgaccagttcgttatttggaatgtctttgaagacacccgatgcgaccgctttgtactgcagtctgatctccaccttggactcattcaaagccttaccggcacgcatcatgatggggacgccctcccaacgctcgttttcgatgttgaaagtcattgctgcaaaagtgacacatttagagtccttgtctacagtgtcatcatccacgtaggcgggcttagacccgtcctcagatttaccgtactggcccaagaggacgtcgtccgtgtcgatgggggccacggcctttagaaccttaaccttttcgtcacgaatagattccgggtcaaaagacaccggtctttccatagtcaagagagtcatgatttgtaacagatggttctgcatcacgtctctgattatgcctatagagtcgaaatagccgccacggccttcggtgccgaacctctctttaaacgaaatctgaacgctttgaatgttgtctctattccacgaggcattcaaaaa

    >7729
    gaattcgatatcaagcttatcgataccgtcgacctcgagtcatgtaattagttatgtcacgcttacattcacgccctccccccacatccgctctaaccgaaaaggaaggagttagacaacctgaagtctaggtccctatttatttttttatagttatgttagtattaagaacgttatttatatttcaaatttttcttttttttctgtacagacgcgtgtacgcatgtaacattatactgaaaaccttgcttgagaaggttttgggacgctcgaaggctttaatttgcggccggtacccaattcgccctatagtgagtcgtattacgcgcgctcactggccgtcgttttacaacgtcgtgactgggaaaaccctggcgttacccaacttaatcgccttgcagcacatccccctttcgccagctggcgtaatagcgaagaggcccgcaccgatcgcccttcccaacagttgcgcagcctgaatggcgaatggcgcgacgcgccctgtagcggcgcattaagcgcggcgggtgtggtggttacgcgcagcgtgaccgctacacttgccagcgccctagcgcccgctcctttcgctttcttcccttcctttctcgccacgttcgccggctttccccgtcaagctctaaatcgggggctccctttagggttccgatttagtgctttacggcacctcgaccccaaaaaacttgattagggtgatggttcacgtagtgggccatcgccctgatagacggtttttcgccctttgacgttggagtccacgttctttaatagtggactcttgttccaaactggaacaacactcaaccctatctcggtctattcttttgatttataagggattttgccgatttcggcctattggttaaaaaatgagctgatttaacaaaaatttaacgcgaattttaacaaaatattaacgtttacaatttcctgatgcggtattttctccttacgcatctgtgcggtatttcacaccgcatatcgacggtcgaggagaacttctagtatatccacatacctaatattattgccttattaaaaatggaatcccaacaattacatcaaaatccacattctcttcaaaatcaattgtcctgtacttccttgttcatgtgtgttcaaaaacgttatatttataggataattatactctatttctcaacaagtaattggttgtttggccgagcggtctaaggcgcctgattcaagaaatatcttgaccgcagttaactgtgggaatactcaggtatcgtaagatgcaagagttcgaatctcttagcaaccattatttttttcctcaacataacgagaacacacaggggcgctatcgcacagaatcaaattcgatgactggaaattttttgttaatttcagaggtcgcctgacgcatatacctttttcaactgaaaaattgggagaaaaaggaaaggtgagaggccggaaccggcttttcatatagaatagagaagcgttcatgactaaatgcttgcatcacaatacttgaagttgacaatattatttaaggacctattgttttttccaataggtggttagcaatcgtcttactttctaacttttcttaccttttacatttcagcaatatatatatatatttcaaggatataccattctaatgtctgcccctatgtctgcccctaagaagatcgtcgttttgccaggtgaccacgttggtcaagaaatcacagccgaagccattaaggttcttaaagctatttctgatgttcgttccaatgtcaagttcgatttcgaaaatcatttaattggtggtgctgctatcgatgctacaggtgtcccacttccagatgaggcgctggaagcctccaagaaggttgatgccgttttgttaggtgctgtggctggtcctaaatggggtaccggtagtgttagacctgaacaaggtttactaaaaatccgtaaagaacttcaattgtacgccaacttaagaccatgtaactttgcatccgactctcttttagacttatctccaatcaagccacaatttgctaaaggtactgacttcgttgttgtcagagaattagtgggaggtatttactttggtaagagaaaggaagacgatggtgatggtgtcgcttgggatagtgaacaatacaccgttccagaagtgcaaagaatcacaagaatggccgctttcatggccctacaacatgagccaccattgcctatttggtccttggataaagctaatcttttggcctcttcaagattatggagaaaaactgtggaggaaaccatcaagaacgaattccctacattgaaggttcaacatcaattgattgattctgccgccatgatcctagttaagaacccaacccacctaaatggtattataatcaccagcaacatgtttggtgatatcatctccgatgaagcctccgttatcccaggttccttgggtttgttgccatctgcgtccttggcctctttgccagacaagaacaccgcatttggtttgtacgaaccatgccacggttctgctccagatttgccaaagaataaggttgaccctatcgccactatcttgtctgctgcaatgatgttgaaattgtcattgaacttgcctgaagaaggtaaggccattgaagatgcagttaaaaaggttttggatgcaggtatcagaactggtgatttaggtggttccaacagtaccaccgaagtcggtgatgctgtcgccgaagaagttaagaaaatccttgcttaaaaagattctctttttttatgatatttgtacataaactttataaatgaaattcataatagaaacgacacgaaattacaaaatggaatatgttcatagggtagacgaaactatatacgcaatctacatacatttatcaagaaggagaaaaaggaggatagtaaaggaatacaggtaagcaaattgatactaatggctcaacgtgataaggaaaaagaattgcactttaacattaatattgacaaggaggagggcaccacacaaaaagttaggtgtaacagaaaatcatgaaactacgattcctaatttgatattggaggattttctctaaaaaaaaaaaaatacaacaaataaaaaacactcaatgacctgaccatttgatggagtttaagtcaataccttcttgaagcatttcccataatggtgaaagttccctcaagaattttactctgtcagaaacggccttacgacgtagtcgatatggtgcactctcagtacaatctgctctgatgccgcatagttaagccagccccgacacccgccaacacccgctgacgcgccctgacgggcttgtctgctcccggcatccgcttacagacaagctgtgaccgtctccgggagctgcatgtgtcagaggttttcaccgtcatcaccgaaacgcgcgagacgaaagggcctcgtgatacgcctatttttataggttaatgtcatgataataatggtttcttagtatgatccaatatcaaaggaaatgatagcattgaaggatgagactaatccaattgaggagtggcagcatatagaacagctaaagggtagtgctgaaggaagcatacgataccccgcatggaatgggataatatcacaggaggtactagactacctttcatcctacataaatagacgcatataagtacgcatttaagcataaacacgcactatgccgttcttctcatgtatatatatatacaggcaacacgcagatataggtgcgacgtgaacagtgagctgtatgtgcgcagctcgcgttgcattttcggaagcgctcgttttcggaaacgctttgaagttcctattccgaagttcctattctctagaaagtataggaacttcagagcgcttttgaaaaccaaaagcgctctgaagacgcactttcaaaaaaccaaaaacgcaccggactgtaacgagctactaaaatattgcgaataccgcttccacaaacattgctcaaaagtatctctttgctatatatctctgtgctatatccctatataacctacccatccacctttcgctccttgaacttgcatctaaactcgacctctacattttttatgtttatctctagtattactctttagacaaaaaaattgtagtaagaactattcatagagtgaatcgaaaacaatacgaaaatgtaaacatttcctatacgtagtatatagagacaaaatagaagaaaccgttcataattttctgaccaatgaagaatcatcaacgctatcactttctgttcacaaagtatgcgcaatccacatcggtatagaatataatcggggatgcctttatcttgaaaaaatgcacccgcagcttcgctagtaatcagtaaacgcgggaagtggagtcaggctttttttatggaagagaaaatagacaccaaagtagccttcttctaaccttaacggacctacagtgcaaaaagttatcaagagactgcattatagagcgcacaaaggagaaaaaaagtaatctaagatgctttgttagaaaaatagcgctctcgggatgcatttttgtagaacaaaaaagaagtatagattctttgttggtaaaatagcgctctcgcgttgcatttctgttctgtaaaaatgcagctcagattctttgtttgaaaaattagcgctctcgcgttgcatttttgttttacaaaaatgaagcacagattcttcgttggtaaaatagcgctttcgcgttgcatttctgttctgtaaaaatgcagctcagattctttgtttgaaaaattagcgctctcgcgttgcatttttgttctacaaaatgaagcacagatgcttcgttcaggtggcacttttcggggaaatgtgcgcggaacccctatttgtttatttttctaaatacattcaaatatgtatccgctcatgagacaataaccctgataaatgcttcaataatattgaaaaaggaagagtatgagtattcaacatttccgtgtcgcccttattcccttttttgcggcattttgccttcctgtttttgctcacccagaaacgctggtgaaagtaaaagatgctgaagatcagttgggtgcacgagtgggttacatcgaactggatctcaacagcggtaagatccttgagagttttcgccccgaagaacgttttccaatgatgagcacttttaaagttctgctatgtggcgcggtattatcccgtattgacgccgggcaagagcaactcggtcgccgcatacactattctcagaatgacttggttgagtactcaccagtcacagaaaagcatcttacggatggcatgacagtaagagaattatgcagtgctgccataaccatgagtgataacactgcggccaacttacttctgacaacgatcggaggaccgaaggagctaaccgcttttttgcacaacatgggggatcatgtaactcgccttgatcgttgggaaccggagctgaatgaagccataccaaacgacgagcgtgacaccacgatgcctgtagcaatggcaacaacgttgcgcaaactattaactggcgaactacttactctagcttcccggcaacaattaatagactggatggaggcggataaagttgcaggaccacttctgcgctcggcccttccggctggctggtttattgctgataaatctggagccggtgagcgtgggtctcgcggtatcattgcagcactggggccagatggtaagccctcccgtatcgtagttatctacacgacggggagtcaggcaactatggatgaacgaaatagacagatcgctgagataggtgcctcactgattaagcattggtaactgtcagaccaagtttactcatatatactttagattgatttaaaacttcatttttaatttaaaaggatctaggtgaagatcctttttgataatctcatgaccaaaatcccttaacgtgagttttcgttccactgagcgtcagaccccgtagaaaagatcaaaggatcttcttgagatcctttttttctgcgcgtaatctgctgcttgcaaacaaaaaaaccaccgctaccagcggtggtttgtttgccggatcaagagctaccaactctttttccgaaggtaactggcttcagcagagcgcagataccaaatactgtccttctagtgtagccgtagttaggccaccacttcaagaactctgtagcaccgcctacatacctcgctctgctaatcctgttaccagtggctgctgccagtggcgataagtcgtgtcttaccgggttggactcaagacgatagttaccggataaggcgcagcggtcgggctgaacggggggttcgtgcacacagcccagcttggagcgaacgacctacaccgaactgagatacctacagcgtgagctatgagaaagcgccacgcttcccgaagggagaaaggcggacaggtatccggtaagcggcagggtcggaacaggagagcgcacgagggagcttccagggggaaacgcctggtatctttatagtcctgtcgggtttcgccacctctgacttgagcgtcgatttttgtgatgctcgtcaggggggcggagcctatggaaaaacgccagcaacgcggcctttttacggttcctggccttttgctggccttttgctcacatgttctttcctgcgttatcccctgattctgtggataaccgtattaccgcctttgagtgagctgataccgctcgccgcagccgaacgaccgagcgcagcgagtcagtgagcgaggaagcggaagagcgcccaatacgcaaaccgcctctccccgcgcgttggccgattcattaatgcagctggcacgacaggtttcccgactggaaagcgggcagtgagcgcaacgcaattaatgtgagttacctcactcattaggcaccccaggctttacactttatgcttccggctcctatgttgtgtggaattgtgagcggataacaatttcacacaggaaacagctatgaccatgattacgccaagcgcgcaattaaccctcactaaagggaacaaaagctggagctcagtttatcattatcaatactcgccatttcaaagaatacgtaaataattaatagtagtgattttcctaactttatttagtcaaaaaattagccttttaattctgctgtaacccgtacatgcccaaaatagggggcgggttacacagaatatataacatcgtaggtgtctgggtgaacagtttattcctggcatccactaaatataatggagcccgctttttaagctggcatccagaaaaaaaaagaatcccagcaccaaaatattgttttcttcaccaaccatcagttcataggtccattctcttagcgcaactacagagaacaggggcacaaacaggcaaaaaacgggcacaacctcaatggagtgatgcaacctgcctggagtaaatgatgacacaaggcaattgacccacgcatgtatctatctcattttcttacaccttctattaccttctgctctctctgatttggaaaaagctgaaaaaaaaggttgaaaccagttccctgaaattattcccctacttgactaataagtatataaagacggtaggtattgattgtaattctgtaaatctatttcttaaacttcttaaattctacttttatagttagtcttttttttagttttaaaacaccagaacttagtttcgacggattctagaactagtggatcccccgggctgcag

    '''

    text3 = '''
    >1671bp ZdMoT7KL0/EgUFC01DddjNNfI/E (rc) WcvvNc76t2UYI2Py4Novcdu7bCY
    TTCTATAGACACACAAACACAAATACACACACTAAATTAATAATGGATGTCCACGAGGTCTCTATATCGGGATCAGCCTGCCTCGTACGCTGCAGGTCGACGGATCCCCGGGTTAATTAAGGCGCGCCAGATCTGTTTAGCTTGCCTCGTCCCCGCCGGGTCACCCGGCCAGCGACATGGAGGCCCAGAATACCCTCCTTGACAGTCTTGACGTGCGCAGCTCAGGGGCATGATGTGACTGTCGCCCGTACATTTAGCCCATACATCCCCATGTATAATCATTTGCATCCATACATTTTGATGGCCGCACGGCGCGAAGCAAAAATTACGGCTCCTCGCTGCAGACCTGCGAGCAGGGAAACGCTCCCCTCACAGACGCGTTGAATTGTCCCCACGCCGCGCCCCTGTAGAGAAATATAAAAGGTTAGGATTTGCCACTGAGGTTCTTCTTTCATATACTTCCTTTTAAAATCTTGCTAGGATACAGTTCTCACATCACATCCGAACATAAACAACCATGGGTAAGGAAAAGACTCACGTTTCGAGGCCGCGATTAAATTCCAACATGGATGCTGATTTATATGGGTATAAATGGGCTCGCGATAATGTCGGGCAATCAGGTGCGACAATCTATCGATTGTATGGGAAGCCCGATGCGCCAGAGTTGTTTCTGAAACATGGCAAAGGTAGCGTTGCCAATGATGTTACAGATGAGATGGTCAGACTAAACTGGCTGACGGAATTTATGCCTCTTCCGACCATCAAGCATTTTATCCGTACTCCTGATGATGCATGGTTACTCACCACTGCGATCCCCGGCAAAACAGCATTCCAGGTATTAGAAGAATATCCTGATTCAGGTGAAAATATTGTTGATGCGCTGGCAGTGTTCCTGCGCCGGTTGCATTCGATTCCTGTTTGTAATTGTCCTTTTAACAGCGATCGCGTATTTCGTCTCGCTCAGGCGCAATCACGAATGAATAACGGTTTGGTTGATGCGAGTGATTTTGATGACGAGCGTAATGGCTGGCCTGTTGAACAAGTCTGGAAAGAAATGCATAAGCTTTTGCCATTCTCACCGGATTCAGTCGTCACTCATGGTGATTTCTCACTTGATAACCTTATTTTTGACGAGGGGAAATTAATAGGTTGTATTGATGTTGGACGAGTCGGAATCGCAGACCGATACCAGGATCTTGCCATCCTATGGAACTGCCTCGGTGAGTTTTCTCCTTCATTACAGAAACGGCTTTTTCAAAAATATGGTATTGATAATCCTGATATGAATAAATTGCAGTTTCATTTGATGCTCGATGAGTTTTTCTAATCAGTACTGACAATAAAAAGATTCTTGTTTTCAAGAACTTGTCATTTGTATAGTTTTTTTATATTGTAGTTGTTCTATTTTAATCAAATGTTAGCGTGATTTATATTTTTTTTCGCCTCGACATCATCTGCCCAGATGCGAAGTTAAGTGCGCAGAAAGTAATATCATGCGTCAATCGTATGTGAATGCTGGTCGCTATACTGCTGTCGATTCGATACTAACGCCGCCATCCAGTGTCGAAAACGAGCTCGAATTCATCGATGAGCATCCTTATAGCCTCTTCTACGAGACCGACACCGTAAACAGGCCCCTTTTCCTTTGTCGATATCATGTAATTAGTTATG

    >YJR048W
    GAGGCACCAGCGTCAGCATTTTCAAAGGTGTGTTCTTCGTCAGACATGTTTTAGTGTGTGAATGAAATAGGTGTATGTTTTCTTTTTGCTAGACAATAATTAGGAACAAGGTAAGGGAACTAAAGTGTAGAATAAGATTAAAAAAGAAGAACAAGTTGAAAAGGCAAGTTGAAATTTCAAGAAAAAAGTCAATTGAAGTACAGTAAATTGACCTGAATATATCTGAGTTCCGACAACAATGAGTTTACCAAAGAGAACAATGGAATAGGAAACTTTGAACGAAGAAAGGAAAGCAGGAAAGGAAAAAATTTTTAGGCTCGAGAACAATAGGGCGAAAAAACAGGCAACGAACGAACAATGGAAAAACGAAAAAAAAAAAAAAAAACACAGAAAAGAATGCAGAAAGATGTCAACTGAAAAAAAAAAAGGTGAACACAGGAAAAAAAATAAAAAAAAAAAAAAAAAAAGGAGGACGAAACAAAAAAGTGAAAAAAAATGAAAATTTTTTTGGAAAACCAAGAAATGAATTATATTTCCGTGTGAGACGACATCGTCGAATATGATTCAGGGTAACAGTATTGATGTAATCAATTTCCTACCTGAATCTAAAATTCCCGGGAGCAAGATCAAGATGTTTTCACCGATCTTTCCGGTCTCTTTGGCCGGGGTTTACGGACGATGGCAGAAGACCAAAGCGCCAGTTCATTTGGCGAGCGTTGGTTGGTGGATCAAGCCCACGCGTAGGCAATCCTCGAGCAGATCCGCCAGGCGTGTATATATAGCGTGGATGGCCAGGCAACTTTAGTGCTGACACATACAGGCATATATATATGTGTGCGACGACACATGATCATATGGCATGCATGTGCTCTGTATGTATATAAAACTCTTGTTTTCTTCTTTTCTCTAAATATTCTTTCCTTATACATTAGGACCTTTGCAGCATAAATTACTATACTTCTATAGACACACAAACACAAATACACACACTAAATTAATAATGACTGAATTCAAGGCCGGTTCTGCTAAGAAAGGTGCTACACTTTTCAAGACTAGATGTCTACAATGCCACACCGTGGAAAAGGGTGGCCCACATAAGGTTGGTCCAAACTTGCATGGTATCTTTGGCAGACACTCTGGTCAAGCTGAAGGGTATTCGTACACAGATGCCAATATCAAGAAAAACGTGTTGTGGGACGAAAATAACATGTCAGAGTACTTGACTAACCCAAAGAAATATATTCCTGGTACCAAGATGGCCTTTGGTGGGTTGAAGAAGGAAAAAGACAGAAACGACTTAATTACCTACTTGAAAAAAGCCTGTGAGTAAACAGGCCCCTTTTCCTTTGTCGATATCATGTAATTAGTTATGTCACGCTTACATTCACGCCCTCCTCCCACATCCGCTCTAACCGAAAAGGAAGGAGTTAGACAACCTGAAGTCTAGGTCCCTATTTATTTTTTTTAATAGTTATGTTAGTATTAAGAACGTTATTTATATTTCAAATTTTTCTTTTTTTTCTGTACAAACGCGTGTACGCATGTAACATTATACTGAAAACCTTGCTTGAGAAGGTTTTGGGACGCTCGAAGGCTTTAATTTGCAAGCTTCGCAGTTTACACTCTCATCGTCGCTCTCATCATCGCTTCCGTTGTTGTTTTCCTTAGTAGCGTCTGCTTCCAGAGAGTATTTATCTCTTATTACCTCTAAAGGTTCTGCTTGATTTCTGACTTTGTTCGCCTCATGTGCATATTTTTCTTGGTTCTTTTGGGACAAAATATGCGTAAAGGACTTTTGTTGTTCCCTCACATTCCAGTTTAGTTGTCGACTGATACTGTTAATAAACTCATCGGGCGAGGCTTCCACGGTTGGAAAAGCATATGGGCTGGCGCATATGGTTATAAAATCACCTTTTTGCAATTCAATTCTATCTTTCCCATCAAAAGCCGCCCATGCTGGAGCCCTTGACTTCATCGAGACTTTCACTTTTAAATTTATACTTTCTGGTAAGATGATGGGTCTGAAACTCAATGCATGTGGACAAATGGGTGTTAAAGCGATTGCATTGACGGTTGGGCATACCAATGACCCACCTGCACTCAAAGAATAGGCCGTGGACCCAGTCGGAGTAGCAGCAATCAGTCCGTCCGCCTGCGCAACGGTCATTAATGAGCCGTCACCATACAATTCTAACATGGATAGAAAAGGACTTGGACCACGATCGATGGTCACTTCGTTCAAAATGTGGTGTGTGCTTAGTTTTTCCACCACACATATTTTCTTCCCCGTGTTTGGGTCTACTTCAGGGCGGTGTCTACGATAAATTGTG

    '''

    text4 = '''
    >2389
    ctgtgaagtggctgaaatttcgtacaaaaaatttcgccaattgattcaggtaaatccggatgctggaacaaaagtgatctatatcatagattcatcattttattttcttgctagagtgcataccaaatctttatctggtttctcaatttacatgatctcccgttataactcggggaactactaccgtatatactttgttcctcgatttcaaagtacaatcataatctcatctgacttatcgttttttcttttatctttctcttcatctcaatattatgattagattgttttgtaagcttttctacctgaaatatgcaccaatattcagaatatctcgtttgccagtttttatacaagtctttctatagttaagtataaaaatgttatgttattaacgttcaaatgctcaatcacatctggacaagcaaatttccttgtcttcagttcattttgggtatgctcctttagatttaacacattgcaggctaaccggaacctgtattatttagtttatgctacgttaaataaagacctttcgttcacataactgaatgtgtaatggccttgagatttcaagcataccaagttggtggagacggggtcgttacaaaagactctatcctgatgcgtttgtctgcacagatggcactccgattaccctgttatccctacaagaatctttttattgtcagtactgattattcctttgccctcggacgagtgctggggcgtcggtttccactatcggcgagtacttctacacagccatcggtccagacggccgcgcttctgcgggcgatttgtgtacgcccgacagtcccggctccggatcggacgattgcgtcgcatcgaccctgcgcccaagctgcatcatcgaaattgccgtcaaccaagctctgatagagttggtcaagaccaatgcggagcatatacgcccggagccgcggcgatcctgcaagctccggatgcctccgctcgaagtagcgcgtctgctgctccatacaagccaaccacggcctccagaagaagatgttggcgacctcgtattgggaatccccgaacatcgcctcgctccagtcaatgaccgctgttatgcggccattgtccgtcaggacattgttggagccgaaatccgcgtgcacgaggtgccggacttcggggcagtcctcggcccaaagcatcagctcatcgagagcctgcgcgacggacgcactgacggtgtcgtccatcacagtttgccagtgatacacatggggatcagcaatcgcgcatatgaaatcacgccatgtagtgtattgaccgattccttgcggtccgaatgggccgaacccgctcgtctggctaagatcggccgcagcgatcgcatccatggcctccgcgaccggctgcagaacagcgggcagttcggtttcaggcaggtcttgcaacgtgacaccctgtgcacggcgggagatgcaataggtcaggctctcgctgaattccccaatgtcaagcacttccggaatcgggagcgcggccgatgcaaagtgccgataaacataacgatctttgtagaaaccatcggcgcagctatttacccgcaggacatatccacgccctcctacatcgaagctgaaagcacgagattcttcgccctccgagagctgcatcaggtcggagacgctgtcgaacttttcgatcagaaacttctcgacagacgtcgcggtgagttcaggctttttacccatggttgtttatgttcggatgtgatgtgattgggtcggctgcaggtcactagtgagaaagtgggcaacctggcgttcctcgacggttgtttatgttcggatgtgatgtgagaactgtatcctagcaagattttaaaaggaagtatatgaaagaagaacctcagtggcaaatcctaaccttttatatttctctacaggggcgcggcgtggggacaattcaacgcgtctgtgaggggagcgtttccctgctcgcaggtctgcagcgaggagccgtaatttttgcttcgcgccgtgcggccatcaaaatgtatggatgcaaatgattatacatggggatgtatgggctaaatgtacgggcgacagtcacatcatgcccctgagctgcgcacgtcaagactgtcaaggagggtattctgggcctccatgtcgctggccgggtgacccggcggggacaaggcaagctaaacagatctggcgcgccttaattaacccggggatccgtcgacctgcagcgtacgaagcttcagctggcggccgcgttctatagtgtcacctaaatcgtatgtggtcagcggccgcattgcacagactctgctgaatctggcaaaacaaccagacgctatgactcacccggacggcatgcaaatcaaaattacccgtcagga

    >2577
    tcctgacgggtaattttgatttgcatgccgtccgggtgagtcatagcgtctggttgttttgccagattcagcagagtctgtgcaatgcggccgctgacagagtcttttgtaacgaccccgtctccaccaacttggtatgcttgaaatctcaaggccattacacattcagttatgtgaacgaaaggtctttatttaacgtagcataaactaaataatacaggttccggttagcctgcaatgtgttaaatctaaaggagcatacccaaaatgaactgaagacaaggaaatttgcttgtccagatgtgattgagcatttgaacgttaataacataacatttttatacttaactatagaaagacttgtataaaaactggcaaacgagatattctgaatattggtgcatatttcaggtagaaaagcttacaaaacaatctaatcataatattgagatgaagagaaagataaaagaaaaaacgataagtcagatgagattatgattgtactttgaaatcgaggaacaaagtatatacggtagtagttccccgagttataacgggagatcatgtaaattgagaaaccagataaagatttggtatgcactctagcaagaaaataaaatgatgaatctatgatatagatcacttttgttccagcgtcgaggaacgccaggttgcccactttctcactagtgacctgcagccgacgatcagatctttcaggaaagtttcggaggagatagtgttcggcagtttgtacatcatctgcgggatcaggtacggtttgatcaggttgtagaagatcaggtaagacatagaatcgatgtagatgatcggtttgtttttgttgatttttacgtaacagttcagttggaatttgttacgcagacccttaaccaggtattctacttcttcgaaagtgaaagactgggtgttcagtacgatcgatttgttggtagagtttttgttgtaatcccatttaccaccatcatccatgaaccagtatgccagagacatcggggtcaggtagttttcaaccaggttgttcgggatggtttttttgttgttaacgatgaacaggttagccagtttgttgaaagcttggtgtttgaaagtctgggcgccccaggtgattaccaggttacccaggtggttaacacgttcttttttgtgcggcggggacagtacccactgatcgtacagcagacatacgtggtccatgtatgctttgtttttccactcgaactgcatacagtaggttttaccttcatcacgagaacggatgtaagcatcacccaggatcagaccgatacctgcttcgaactgttcgatgttcagttcgatcagctgggatttgtattctttcagcagtttagagttcggacccaggttcattacctggttttttttgatgtttttcatatgcatggatccggggttttttctccttgacgttaaagtatagaggtatattaacaattttttgttgatacttttattacatttgaataagaagtaatacaaaccgaaaatgttgaaagtattagttaaagtggttatgcagtttttgcatttatatatctgttaatagatcaaaaatcatcgcttcgctgattaattaccccagaaataaggctaaaaaactaatcgcattatcatcctatggttgttaatttgattcgttcatttgaaggtttgtggggccaggttactgccaatttttcctcttcataaccataaaagctagtattgtagaatctttattgttcggagcagtgcggcgcgaggcacatctgcgtttcaggaacgcgaccggtgaagacgaggacgcacggaggagagtcttccttcggagggctgtcacccgctcggcggcttctaatccgtacttcaatatagcaatgagcagttaagcgtattactgaaagttccaaagagaaggtttttttaggctaagataatggggctctttacatttccacaacatataagtaagattagatatggatatgtatatggatatgtatatggtggtaatgccatgtaatatgattattaaacttctttgcgtccatccaacgagatctggcgcgccttaattaacccaacctgcattaatgaatcggccaacgcgcggattaccctgttatccctacatattgttgtgccatctgtgcagacaaacgcatcaggattcagtactgacaataaaaagattcttgttttcaagaacttgtcatttgtatagtttttttatattgtagttgttctattttaatcaaatgttagcgtgatttatattttttttcgcctcgacatcatctgcccagatgcgaagttaagtgcgcagaaagtaatatcatgcgtcaatcgtatgtgaatgctggtcgctatactgctgtcgattcgatactaacgccgccatccagtgtcgaaaacgagctcgaattcatcgatgatatcagatccactagtggcctatgcggccgcggatctgccggtctccctatagtgagtcgatccggatttacctgaatcaattggcgaaattttttgtacgaaatttcagccacttcacag
    '''

    text5 = '''

    >2577
    tcctgacgggtaattttgatttgcatgccgtccgggtgagtcatagcgtctggttgttttgccagattcagcagagtctgtgcaatgcggccgctgacagagtcttttgtaacgaccccgtctccaccaacttggtatgcttgaaatctcaaggccattacacattcagttatgtgaacgaaaggtctttatttaacgtagcataaactaaataatacaggttccggttagcctgcaatgtgttaaatctaaaggagcatacccaaaatgaactgaagacaaggaaatttgcttgtccagatgtgattgagcatttgaacgttaataacataacatttttatacttaactatagaaagacttgtataaaaactggcaaacgagatattctgaatattggtgcatatttcaggtagaaaagcttacaaaacaatctaatcataatattgagatgaagagaaagataaaagaaaaaacgataagtcagatgagattatgattgtactttgaaatcgaggaacaaagtatatacggtagtagttccccgagttataacgggagatcatgtaaattgagaaaccagataaagatttggtatgcactctagcaagaaaataaaatgatgaatctatgatatagatcacttttgttccagcgtcgaggaacgccaggttgcccactttctcactagtgacctgcagccgacgatcagatctttcaggaaagtttcggaggagatagtgttcggcagtttgtacatcatctgcgggatcaggtacggtttgatcaggttgtagaagatcaggtaagacatagaatcgatgtagatgatcggtttgtttttgttgatttttacgtaacagttcagttggaatttgttacgcagacccttaaccaggtattctacttcttcgaaagtgaaagactgggtgttcagtacgatcgatttgttggtagagtttttgttgtaatcccatttaccaccatcatccatgaaccagtatgccagagacatcggggtcaggtagttttcaaccaggttgttcgggatggtttttttgttgttaacgatgaacaggttagccagtttgttgaaagcttggtgtttgaaagtctgggcgccccaggtgattaccaggttacccaggtggttaacacgttcttttttgtgcggcggggacagtacccactgatcgtacagcagacatacgtggtccatgtatgctttgtttttccactcgaactgcatacagtaggttttaccttcatcacgagaacggatgtaagcatcacccaggatcagaccgatacctgcttcgaactgttcgatgttcagttcgatcagctgggatttgtattctttcagcagtttagagttcggacccaggttcattacctggttttttttgatgtttttcatatgcatggatccggggttttttctccttgacgttaaagtatagaggtatattaacaattttttgttgatacttttattacatttgaataagaagtaatacaaaccgaaaatgttgaaagtattagttaaagtggttatgcagtttttgcatttatatatctgttaatagatcaaaaatcatcgcttcgctgattaattaccccagaaataaggctaaaaaactaatcgcattatcatcctatggttgttaatttgattcgttcatttgaaggtttgtggggccaggttactgccaatttttcctcttcataaccataaaagctagtattgtagaatctttattgttcggagcagtgcggcgcgaggcacatctgcgtttcaggaacgcgaccggtgaagacgaggacgcacggaggagagtcttccttcggagggctgtcacccgctcggcggcttctaatccgtacttcaatatagcaatgagcagttaagcgtattactgaaagttccaaagagaaggtttttttaggctaagataatggggctctttacatttccacaacatataagtaagattagatatggatatgtatatggatatgtatatggtggtaatgccatgtaatatgattattaaacttctttgcgtccatccaacgagatctggcgcgccttaattaacccaacctgcattaatgaatcggccaacgcgcggattaccctgttatccctacatattgttgtgccatctgtgcagacaaacgcatcaggattcagtactgacaataaaaagattcttgttttcaagaacttgtcatttgtatagtttttttatattgtagttgttctattttaatcaaatgttagcgtgatttatattttttttcgcctcgacatcatctgcccagatgcgaagttaagtgcgcagaaagtaatatcatgcgtcaatcgtatgtgaatgctggtcgctatactgctgtcgattcgatactaacgccgccatccagtgtcgaaaacgagctcgaattcatcgatgatatcagatccactagtggcctatgcggccgcggatctgccggtctccctatagtgagtcgatccggatttacctgaatcaattggcgaaattttttgtacgaaatttcagccacttcacag

    >2389
    ctgtgaagtggctgaaatttcgtacaaaaaatttcgccaattgattcaggtaaatccggatgctggaacaaaagtgatctatatcatagattcatcattttattttcttgctagagtgcataccaaatctttatctggtttctcaatttacatgatctcccgttataactcggggaactactaccgtatatactttgttcctcgatttcaaagtacaatcataatctcatctgacttatcgttttttcttttatctttctcttcatctcaatattatgattagattgttttgtaagcttttctacctgaaatatgcaccaatattcagaatatctcgtttgccagtttttatacaagtctttctatagttaagtataaaaatgttatgttattaacgttcaaatgctcaatcacatctggacaagcaaatttccttgtcttcagttcattttgggtatgctcctttagatttaacacattgcaggctaaccggaacctgtattatttagtttatgctacgttaaataaagacctttcgttcacataactgaatgtgtaatggccttgagatttcaagcataccaagttggtggagacggggtcgttacaaaagactctatcctgatgcgtttgtctgcacagatggcactccgattaccctgttatccctacaagaatctttttattgtcagtactgattattcctttgccctcggacgagtgctggggcgtcggtttccactatcggcgagtacttctacacagccatcggtccagacggccgcgcttctgcgggcgatttgtgtacgcccgacagtcccggctccggatcggacgattgcgtcgcatcgaccctgcgcccaagctgcatcatcgaaattgccgtcaaccaagctctgatagagttggtcaagaccaatgcggagcatatacgcccggagccgcggcgatcctgcaagctccggatgcctccgctcgaagtagcgcgtctgctgctccatacaagccaaccacggcctccagaagaagatgttggcgacctcgtattgggaatccccgaacatcgcctcgctccagtcaatgaccgctgttatgcggccattgtccgtcaggacattgttggagccgaaatccgcgtgcacgaggtgccggacttcggggcagtcctcggcccaaagcatcagctcatcgagagcctgcgcgacggacgcactgacggtgtcgtccatcacagtttgccagtgatacacatggggatcagcaatcgcgcatatgaaatcacgccatgtagtgtattgaccgattccttgcggtccgaatgggccgaacccgctcgtctggctaagatcggccgcagcgatcgcatccatggcctccgcgaccggctgcagaacagcgggcagttcggtttcaggcaggtcttgcaacgtgacaccctgtgcacggcgggagatgcaataggtcaggctctcgctgaattccccaatgtcaagcacttccggaatcgggagcgcggccgatgcaaagtgccgataaacataacgatctttgtagaaaccatcggcgcagctatttacccgcaggacatatccacgccctcctacatcgaagctgaaagcacgagattcttcgccctccgagagctgcatcaggtcggagacgctgtcgaacttttcgatcagaaacttctcgacagacgtcgcggtgagttcaggctttttacccatggttgtttatgttcggatgtgatgtgattgggtcggctgcaggtcactagtgagaaagtgggcaacctggcgttcctcgacggttgtttatgttcggatgtgatgtgagaactgtatcctagcaagattttaaaaggaagtatatgaaagaagaacctcagtggcaaatcctaaccttttatatttctctacaggggcgcggcgtggggacaattcaacgcgtctgtgaggggagcgtttccctgctcgcaggtctgcagcgaggagccgtaatttttgcttcgcgccgtgcggccatcaaaatgtatggatgcaaatgattatacatggggatgtatgggctaaatgtacgggcgacagtcacatcatgcccctgagctgcgcacgtcaagactgtcaaggagggtattctgggcctccatgtcgctggccgggtgacccggcggggacaaggcaagctaaacagatctggcgcgccttaattaacccggggatccgtcgacctgcagcgtacgaagcttcagctggcggccgcgttctatagtgtcacctaaatcgtatgtggtcagcggccgcattgcacagactctgctgaatctggcaaaacaaccagacgctatgactcacccggacggcatgcaaatcaaaattacccgtcagga

    >5681
    atccggatttacctgaatcaattggcgaaattttttgtacgaaatttcagccacttcacaggcggttttcgcacgtacccatgcgctacgttcctggccctcttcaaacaggcccagttcgccaataaaatcaccctgattcagataggagaggatcatttctttaccctcttcgtctttgatcagcactgccacagagcctttaacgatgtagtacagcgtttccgctttttcaccctggtgaataagcgtgctcttggatgggtacttatgaatgtggcaatgagacaagaaccattcgagagtaggatccgtttgaggtttaccaagtaccataagatccttaaatttttattatctagctagatgataatattatatcaagaattgtacctgaaagcaaataaattttttatctggcttaactatgcggcatcagagcagattgtactgagagtgcaccatatgcggtgtgaaataccgcacagatgcgtaaggagaaaataccgcatcaggcgctcttccgcttcctcgctcactgactcgctgcgctcggtcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacggttatccacagaatcaggggataacgcaggaaagaacatgtgagcaaaaggccagcaaaagcccaggaaccgtaaaaaggccgcgttgctggcgtttttccataggctccgcccccctgacgagcatcacaaaaatcgacgctcaagtcagaggtggcgaaacccgacaggactataaagataccaggcgtttccccctggaagctccctcgtgcgctctcctgttccgaccctgccgcttaccggatacctgtccgcctttctcccttcgggaagcgtggcgctttctcatagctcacgctgtaggtatctcagttcggtgtaggtcgttcgctccaagctgggctgtgtgcacgaaccccccgttcagcccgaccgctgcgccttatccggtaactatcgtcttgagtccaacccggtaagacacgacttatcgccactggcagcagccactggtaacaggattagcagagcgaggtatgtaggcggtgctacagagttcttgaagtggtggcctaactacggctacactagaaggacagtatttggtatctgcgctctgctgaagccagttaccttcggaaaaagagttggtagctcttgatccggcaaacaaaccaccgctggtagcggtggtttttttgtttgcaagcagcagattacgcgcagaaaaaaaggatctcaagaagatcctttgatcttttctacggggtctgacgctcagtggaacgaaaactcacgttaagggattttggtcatgaggggtaataactgatataattaaattgaagctctaatttgtgagtttagtatacatgcatttacttataatacagttttttagttttgctggccgcatcttctcaaatatgcttcccagcctgcttttctgtaacgttcaccctctaccttagcatcccttccctttgcaaatagtcctcttccaacaataataatgtcagatcctgtagagaccacatcatccacggttctatactgttgacccaatgcgtctcccttgtcatctaaacccacaccgggtgtcataatcaaccaatcgtaaccttcatctcttccacccatgtctctttgagcaataaagccgataacaaaatctttgtcgctcttcgcaatgtcaacagtacccttagtatattctccagtagatagggagcccttgcatgacaattctgctaacatcaaaaggcctctaggttcctttgttacttcttctgccgcctgcttcaaaccgctaacaatacctgggcccaccacaccgtgtgcattcgtaatgtctgcccattctgctattctgtatacacccgcagagtactgcaatttgactgtattaccaatgtcagcaaattttctgtcttcgaagagtaaaaaattgtacttggcggataatgcctttagcggcttaactgtgccctccatggaaaaatcagtcaaaatatccacatgtgtttttagtaaacaaattttgggacctaatgcttcaactaactccagtaattccttggtggtacgaacatccaatgaagcacacaagtttgtttgcttttcgtgcatgatattaaatagcttggcagcaacaggactaggatgagtagcagcacgttccttatatgtagctttcgacatgatttatcttcgtttcctgcaggtttttgttctgtgcagttgggttaagaatactgggcaatttcatgtttcttcaacactacatatgcgtatatataccaatctaagtctgtgctccttccttcgttcttccttctgttcggagattaccgaatcaaaaaaatttcaaagaaaccgaaatcaaaaaaaagaataaaaaaaaaatgatgaattgaattgaaaagctagcttatcgatgataagctgtcaaagatgagaattaattccacggactatagactatactagatactccgtctactgtacgatacacttccgctcaggtccttgtcctttaacgaggccttaccactcttttgttactctattgatccagctcagcaaaggcagtgtgatctaagattctatcttcgcgatgtagtaaaactagctagaccgagaaagagactagaaatgcaaaaggcacttctacaatggctgccatcattattatccgatgtgacgctgcagcttctcaatgatattcgaatacgctttgaggagatacagcctaatatccgacaaactgttttacagatttacgatcgtacttgttacccatcattgaattttgaacatccgaacctgggagttttccctgaaacagatagtatatttgaacctgtataataatatatagtctagcgctttacggaagacaatgtatgtatttcggttcctggagaaactattgcatctattgcataggtaatcttgcacgtcgcatccccggttcattttctgcgtttccatcttgcacttcaatagcatatctttgttaacgaagcatctgtgcttcattttgtagaacaaaaatgcaacgcgagagcgctaatttttcaaacaaagaatctgagctgcatttttacagaacagaaatgcaacgcgaaagcgctattttaccaacgaagaatctgtgcttcatttttgtaaaacaaaaatgcaacgcgacgagagcgctaatttttcaaacaaagaatctgagctgcatttttacagaacagaaatgcaacgcgagagcgctattttaccaacaaagaatctatacttcttttttgttctacaaaaatgcatcccgagagcgctatttttctaacaaagcatcttagattactttttttctcctttgtgcgctctataatgcagtctcttgataactttttgcactgtaggtccgttaaggttagaagaaggctactttggtgtctattttctcttccataaaaaaagcctgactccacttcccgcgtttactgattactagcgaagctgcgggtgcattttttcaagataaaggcatccccgattatattctataccgatgtggattgcgcatactttgtgaacagaaagtgatagcgttgatgattcttcattggtcagaaaattatgaacggtttcttctattttgtctctatatactacgtataggaaatgtttacattttcgtattgttttcgattcactctatgaatagttcttactacaatttttttgtctaaagagtaatactagagataaacataaaaaatgtagaggtcgagtttagatgcaagttcaaggagcgaaaggtggatgggtaggttatatagggatatagcacagagatatatagcaaagagatacttttgagcaatgtttgtggaagcggtattcgcaatgggaagctccaccccggttgataatcagaaaagccccaaaaacaggaagattattatcaaaaaggatcttcacctagatccttttaaattaaaaatgaagttttaaatcaatctaaagtatatatgagtaaacttggtctgacagttaccaatgcttaatcagtgaggcacctatctcagcgatctgtctatttcgttcatccatagttgcctgactccccgtcgtgtagataactacgatacgggagcgcttaccatctggccccagtgctgcaatgataccgcgagacccacgctcaccggctccagatttatcagcaataaaccagccagccggaagggccgagcgcagaagtggtcctgcaactttatccgcctccatccagtctattaattgttgccgggaagctagagtaagtagttcgccagttaatagtttgcgcaacgttgttggcattgctacaggcatcgtggtgtcactctcgtcgtttggtatggcttcattcagctccggttcccaacgatcaaggcgagttacatgatcccccatgttgtgcaaaaaagcggttagctccttcggtcctccgatcgttgtcagaagtaagttggccgcagtgttatcactcatggttatggcagcactgcataattctcttactgtcatgccatccgtaagatgcttttctgtgactggtgagtactcaaccaagtcattctgagaatagtgtatgcggcgaccgagttgctcttgcccggcgtcaatacgggataatagtgtatcacatagcagaactttaaaagtgctcatcattggaaaacgttcttcggggcgaaaactctcaaggatcttaccgctgttgagatccagttcgatgtaacccactcgtgcacccaactgatcttcagcatcttttactttcaccagcgtttctgggtgagcaaaaacaggaaggcaaaatgccgcaaaaaagggaataagggcgacacggaaatgttgaatactcatactcttcctttttcaatattattgaagcatttatcagggttattgtctcatgagcggatacatatttgaatgtatttagaaaaataaacaaataggggttccgcgcacatttccccgaaaagtgccacctgctaagaaaccattattatcatgacattaacctataaaaataggcgtatcacgaggccctttcgtctcgcgcgtttcggtgatgacggtgaaaacctctgacacatgcagctcccggagacggtcacagcttgtctgtaagcggatgccgggagcagacaagcccgtcagggcgcgtcagcgggtgttggcgggtgtcggggctggcttaactatgcggcatcagagcagattgtactgagagtgcaccatagatcctgaggatcggggtgataaatcagtctgcgccacatcgggggaaacaaaatggcgcgagatctaaaaaaaaaggctccaaaaggagcctttcgcgctaccaggtaacgcgccactccgacgggattaacgagtgccgtaaacgacgatggttttaccgtgtgcggagatcaggttctgatcctcgagcatcttaagaattcgtcccacggtttgtctagagcagccgacaatctggccaatttcctgacgggtaattttgatttgcatgccgtccgggtgagtcatagcgtctggttgttttgccagattcagcagagtctgtgcaatgcggccgctgac
    '''

    text6 = '''
    >1671
    gaccaaattaactctatccttccattgcacaatttgcccagtatggatgtccacgaggtctctgctatggacacatttacgcccgtacgctgcaggtcgacggatccccgggttaattaaggcgcgccagatctgtttagcttgcctcgtccccgccgggtcacccggccagcgacatggaggcccagaataccctccttgacagtcttgacgtgcgcagctcaggggcatgatgtgactgtcgcccgtacatttagcccatacatccccatgtataatcatttgcatccatacattttgatggccgcacggcgcgaagcaaaaattacggctcctcgctgcagacctgcgagcagggaaacgctcccctcacagacgcgttgaattgtccccacgccgcgcccctgtagagaaatataaaaggttaggatttgccactgaggttcttctttcatatacttccttttaaaatcttgctaggatacagttctcacatcacatccgaacataaacaaccatgggtaaggaaaagactcacgtttcgaggccgcgattaaattccaacatggatgctgatttatatgggtataaatgggctcgcgataatgtcgggcaatcaggtgcgacaatctatcgattgtatgggaagcccgatgcgccagagttgtttctgaaacatggcaaaggtagcgttgccaatgatgttacagatgagatggtcagactaaactggctgacggaatttatgcctcttccgaccatcaagcattttatccgtactcctgatgatgcatggttactcaccactgcgatccccggcaaaacagcattccaggtattagaagaatatcctgattcaggtgaaaatattgttgatgcgctggcagtgttcctgcgccggttgcattcgattcctgtttgtaattgtccttttaacagcgatcgcgtatttcgtctcgctcaggcgcaatcacgaatgaataacggtttggttgatgcgagtgattttgatgacgagcgtaatggctggcctgttgaacaagtctggaaagaaatgcataagcttttgccattctcaccggattcagtcgtcactcatggtgatttctcacttgataaccttatttttgacgaggggaaattaataggttgtattgatgttggacgagtcggaatcgcagaccgataccaggatcttgccatcctatggaactgcctcggtgagttttctccttcattacagaaacggctttttcaaaaatatggtattgataatcctgatatgaataaattgcagtttcatttgatgctcgatgagtttttctaatcagtactgacaataaaaagattcttgttttcaagaacttgtcatttgtatagtttttttatattgtagttgttctattttaatcaaatgttagcgtgatttatattttttttcgcctcgacatcatctgcccagatgcgaagttaagtgcgcagaaagtaatatcatgcgtcaatcgtatgtgaatgctggtcgctatactgctgtcgattcgatactaacgccgccatccagtgtcgaaaacgagctcgaattcatcgatgaatgacgttatagacgagcctacgagaccgacaccgtaatcaataagcaattttttgcgaacatgattaagtttattttac

    >3527
    aaattgacctcgtttgattgctctcaggtttccaacaacttgtttgttaccggtttcagtacgggtattatcaagttatgggatgccagagcggctgaagctgccaccactgatttgacttatagacaaaacggtgaagatccaattcagaatgaaatcgctaacttctatcatgccggcggtgattctgttgtcgacgtccaattttctgccacttcaagctctgaattctttactgtgggcggcactggtaatatttaccactggaacactgactattccttgtcaaagtacaatcctgacgataccattgctcctcctcaagatgccactgaagaatcacaaacaaaatctctgagattcttgcacaagggtggaagcagaagatctccaaaacagattggaagaagaaacaccgccgcttggcatccagttattgaaaacttggttggtactgtcgatgacgatagtttagtcagcatctacaagccctataccgaggaaagcgaatagtcgccatgctaaacgcgcggaacaaggccatatttatatatttaatgcttttaactattattagtttttctcacccagggctggtttctttaccctgtgtgatgaaagtgcgcgcctaaagttatgtatgagctactgttagtatatttattattcaatatttaattaaacaatacttactactgatgaaagataccgtacacctgctggcgaataagtcactatacacgagcaattatatttctcaggtcattgcgacaattgaaaaatcggatcgactgattatcattaaggcgtgtgacggctcagaataaggaagttctattttaaagggcagcaaaaatttggcacaatttaaaaagaaagttggtctctggtagggttggatccggtttttcataacttgcgtttcatttatggttgcgtatttctcgcagtgtacatagaccaaattaactctatccttccattgcacaatttgcccagtatggcttcactgttcagacccccagaatctgcgaaatgcaacccaaactctcctagacttaaactgcccctcttacgaaataatcaggtagatgaaaataatatatacttgacgtcgaatgggagttccaccacagcttacagtagccacaccccagaaccactgacctcttccacatcgacacttttctcccaaactcgacttcatcctagcgactcttcaatgactttaaatacaatgaagaagaggcctgcaccgccatctttaccttcgctcagcataaattcacagtctaagtgcaaaacactacccgaactcgtacccatcgccgatgtgtctgatggtaaacatgatttaggattgaaacagcgtgtgatagccgaaaatgagttgtctggtaatagtgacttaaccccttcatcgatggcaagccccttttcacatacaaacacctcttctccctacctcagaaatgatctgagcaattcagtgggatctgacttttcaaatttgatatcggcatatgaacaaagttcaagtcccatcaagtcatcgtcccagcctaaatcatcttctgaatcgtacatagacttaaacagtgtacgagatgttgatcaattggatgaaaatggttggaaatatgcaaatttaaaagataggatcgagacattaggcattctaggagaaggagccggtggctctgtttccaagtgtaaattgaaaaatggatcaaaaatattcgctttaaaagtgataaacacattaaatacagatcccgagtatcagaagcaaatattcagagaattacagtttaataggagtttccaatccgaatatatcgtacgatattatggaatgtttacggatgacgaaaactcttcaatttatattgctatggagtacatgggtgggcgatcgttggatgctatttataaaaatttgttagagcgtggtggtaggatcagtgaaaaagtcctggggaagattgcagaagcggtactaagaggactatcatatttgcatgaaaaaaaagttattcatagagatattaagccccagaatattttactgaatgaaaatggtcaggtgaaactttgtgattttggggtcagtggagaagccgttaactcgctagccacaacattcacggggacgtcattctatatggctccagaaaggattcaaggtcaaccatacagtgtcacatctgatgtatggtcacttggattaacgattttggaagtggcgaacgggaaatttccatgctcttccgagaagatggcagccaatatagctccctttgaattgttaatgtggattttaacatttactcctgaattaaaggatgaacccgaatctaatatcatatggagtccatcattcaaatcctttatcgactactgtctgaaaaaagatagtcgtgaacggccatctccaagacaaatgatcaatcatccttggataaagggtcaaatgaaaaaaaatgtcaatatggaaaaattcgtgaggaagtgctggaaagattaatcaataagcaattttttgcgaacatgattaagtttattttactttatttcgcattttccataaaaaaattttcctccatacaagattcatacccaggatagcctaactaaaatgtatggctttatacagcttgacgacaaacttaatttgaatatatagatatattaatttaatcagcaggattagcatttaatgtcttacatgtctttgtatttggcatacgtattcagtgatattttaatacctcgcaacgcaatttccagcgagtttacgtttgaagcaaacgtaactcccatgagttatacataacgcctgctgcagctgaaccagaacaatataccgtggtattaccgtaagcatttgaaaacaataataagtttccaagtgccgctttagatccaaagtacaaggacatattgtggaagagtaagttgaatatttgaaaatgagagctttttcagcagccaccgttagggccacaactaggaagtcgttcatcccaatggcaccaagaactccttttgtgactccatcatttacaaagaatgtaggctcaatgagaagaatgagattttattctgatgaagccaaaagtgaagaatccaaagaaaacaatgaagatttgactgaagagcaatcagaaatcaagaaattagagagccagttaagcgcgaagactaaagaagcttctgaactcaaggacagattattaagatctgtggcagatttcagaaatttacaacaagtcacaaagaaggatattcagaaagctaaggactttgctttacagaagtttgcaaaggatttattggaatctgtagataactttggtcatgctttgaatgcttttaaagaggaagacttacaaaagtccaaggaaattagtgatttgtatacaggggttagaatgacaagagatgtttttgaaaacaccctaagaaagcacggtattgaaaaattagacccattgggagaaccatttgatccaaataaacacgaa
    '''

    text7 = '''
    >630
    tcctgacgggtaattttgatttgcatgccgtccgggtgagtcatagcgtctggttgttttgccagattcagcagagtctgtgcaatgcggccgctgacgtatctcagttcggtgtaggtcgttcgctccaagctgggctgtgtgcacgaaccccccgttcagcccgaccgctgcgccttatccggtaactatcgtcttgagtccaacccggtaagacacgacttatcgccactggcagcagccactggtaacaggattagcagagcgaggtatgtaggcggtgctacagagttcttgaagtggtggcctaactacggctacactagaaggacagtatttggtatctgcgctctgctgaagccagttaccttcggaaaaagagttggtagctcttgatccggcaaacaaaccaccgctggtagcggtggtttttttgtttgcaagcagcagattacgcgcagaaaaaaaggatctcaagaagatcctttgatcttttctacggggtctgacgctcagtggaacgaaaactcacgttaagggattttggtcatgagattatcaaaaaggatcttcacctagatgtcgaggaacgccaggttgcccactttctcactagtgacctgcagccgg

    >1196
    gtcgaggaacgccaggttgcccactttctcactagtgacctgcagccggccaatcacatcacatccgaacataaacaaccatgggtaaaaagcctgaactcaccgcgacgtctgtcgagaagtttctgatcgaaaagttcgacagcgtctccgacctgatgcagctctcggagggcgaagaatctcgtgctttcagcttcgatgtaggagggcgtggatatgtcctgcgggtaaatagctgcgccgatggtttctacaaagatcgttatgtttatcggcactttgcatcggccgcgctcccgattccggaagtgcttgacattggggaattcagcgagagcctgacctattgcatctcccgccgtgcacagggtgtcacgttgcaagacctgcctgaaaccgaactgcccgctgttctgcagccggtcgcggaggccatggatgcgatcgctgcggccgatcttagccagacgagcgggttcggcccattcggaccgcaaggaatcggtcaatacactacatggcgtgatttcatatgcgcgattgctgatccccatgtgtatcactggcaaactgtgatggacgacaccgtcagtgcgtccgtcgcgcaggctctcgatgagctgatgctttgggccgaggactgccccgaagtccggcacctcgtgcacgcggatttcggctccaacaatgtcctgacggacaatggccgcataacagcggtcattgactggagcgaggcgatgttcggggattcccaatacgaggtcgccaacatcttcttctggaggccgtggttggcttgtatggagcagcagacgcgctacttcgagcggaggcatccggagcttgcaggatcgccgcggctccgggcgtatatgctccgcattggtcttgaccaactctatcagagcttggttgacggcaatttcgatgatgcagcttgggcgcagggtcgatgcgacgcaatcgtccgatccggagccgggactgtcgggcgtacacaaatcgcccgcagaagcgcggccgtctggaccgatggctgtgtagaagtactcgccgatagtggaaaccgacgccccagcactcgtccgagggcaaaggaataatcagtactgacaataaaaagattcttgtagggataacagggtaatcggacgcgccatctgtgcagacaaacgcatcaggatttaaat

    >650
    cgcgccatctgtgcagacaaacgcatcaggatagagtcttttgtaacgaccccgtctccaccaacttggtatgcttgaaatctcaaggccattacacattcagttatgtgaacgaaaggtctttatttaacgtagcataaactaaataatacaggttccggttagcctgcaatgtgttaaatctaaaggagcatacccaaaatgaactgaagacaaggaaatttgcttgtccagatgtgattgagcatttgaacgttaataacataacatttttatacttaactatagaaagacttgtataaaaactggcaaacgagatattctgaatattggtgcatatttcaggtagaaaagcttacaaaacaatctaatcataatattgagatgaagagaaagataaaagaaaaaacgataagtcagatgagattatgattgtactttgaaatcgaggaacaaagtatatacggtagtagttccccgagttataacgggagatcatgtaaattgagaaaccagataaagatttggtatgcactctagcaagaaaataaaatgatgaatctatgatatagatcacttttgttccagcatccggatttacctgaatcaattggcgaaattttttgtacgaaatttcagccacttcacag

    >5681
    gtcagcggccgcattgcacagactctgctgaatctggcaaaacaaccagacgctatgactcacccggacggcatgcaaatcaaaattacccgtcaggaaattggccagattgtcggctgctctagacaaaccgtgggacgaattcttaagatgctcgaggatcagaacctgatctccgcacacggtaaaaccatcgtcgtttacggcactcgttaatcccgtcggagtggcgcgttacctggtagcgcgaaaggctccttttggagcctttttttttagatctcgcgccattttgtttcccccgatgtggcgcagactgatttatcaccccgatcctcaggatctatggtgcactctcagtacaatctgctctgatgccgcatagttaagccagccccgacacccgccaacacccgctgacgcgccctgacgggcttgtctgctcccggcatccgcttacagacaagctgtgaccgtctccgggagctgcatgtgtcagaggttttcaccgtcatcaccgaaacgcgcgagacgaaagggcctcgtgatacgcctatttttataggttaatgtcatgataataatggtttcttagcaggtggcacttttcggggaaatgtgcgcggaacccctatttgtttatttttctaaatacattcaaatatgtatccgctcatgagacaataaccctgataaatgcttcaataatattgaaaaaggaagagtatgagtattcaacatttccgtgtcgcccttattcccttttttgcggcattttgccttcctgtttttgctcacccagaaacgctggtgaaagtaaaagatgctgaagatcagttgggtgcacgagtgggttacatcgaactggatctcaacagcggtaagatccttgagagttttcgccccgaagaacgttttccaatgatgagcacttttaaagttctgctatgtgatacactattatcccgtattgacgccgggcaagagcaactcggtcgccgcatacactattctcagaatgacttggttgagtactcaccagtcacagaaaagcatcttacggatggcatgacagtaagagaattatgcagtgctgccataaccatgagtgataacactgcggccaacttacttctgacaacgatcggaggaccgaaggagctaaccgcttttttgcacaacatgggggatcatgtaactcgccttgatcgttgggaaccggagctgaatgaagccataccaaacgacgagagtgacaccacgatgcctgtagcaatgccaacaacgttgcgcaaactattaactggcgaactacttactctagcttcccggcaacaattaatagactggatggaggcggataaagttgcaggaccacttctgcgctcggcccttccggctggctggtttattgctgataaatctggagccggtgagcgtgggtctcgcggtatcattgcagcactggggccagatggtaagcgctcccgtatcgtagttatctacacgacggggagtcaggcaactatggatgaacgaaatagacagatcgctgagataggtgcctcactgattaagcattggtaactgtcagaccaagtttactcatatatactttagattgatttaaaacttcatttttaatttaaaaggatctaggtgaagatcctttttgataataatcttcctgtttttggggcttttctgattatcaaccggggtggagcttcccattgcgaataccgcttccacaaacattgctcaaaagtatctctttgctatatatctctgtgctatatccctatataacctacccatccacctttcgctccttgaacttgcatctaaactcgacctctacattttttatgtttatctctagtattactctttagacaaaaaaattgtagtaagaactattcatagagtgaatcgaaaacaatacgaaaatgtaaacatttcctatacgtagtatatagagacaaaatagaagaaaccgttcataattttctgaccaatgaagaatcatcaacgctatcactttctgttcacaaagtatgcgcaatccacatcggtatagaatataatcggggatgcctttatcttgaaaaaatgcacccgcagcttcgctagtaatcagtaaacgcgggaagtggagtcaggctttttttatggaagagaaaatagacaccaaagtagccttcttctaaccttaacggacctacagtgcaaaaagttatcaagagactgcattatagagcgcacaaaggagaaaaaaagtaatctaagatgctttgttagaaaaatagcgctctcgggatgcatttttgtagaacaaaaaagaagtatagattctttgttggtaaaatagcgctctcgcgttgcatttctgttctgtaaaaatgcagctcagattctttgtttgaaaaattagcgctctcgtcgcgttgcatttttgttttacaaaaatgaagcacagattcttcgttggtaaaatagcgctttcgcgttgcatttctgttctgtaaaaatgcagctcagattctttgtttgaaaaattagcgctctcgcgttgcatttttgttctacaaaatgaagcacagatgcttcgttaacaaagatatgctattgaagtgcaagatggaaacgcagaaaatgaaccggggatgcgacgtgcaagattacctatgcaatagatgcaatagtttctccaggaaccgaaatacatacattgtcttccgtaaagcgctagactatatattattatacaggttcaaatatactatctgtttcagggaaaactcccaggttcggatgttcaaaattcaatgatgggtaacaagtacgatcgtaaatctgtaaaacagtttgtcggatattaggctgtatctcctcaaagcgtattcgaatatcattgagaagctgcagcgtcacatcggataataatgatggcagccattgtagaagtgccttttgcatttctagtctctttctcggtctagctagttttactacatcgcgaagatagaatcttagatcacactgcctttgctgagctggatcaatagagtaacaaaagagtggtaaggcctcgttaaaggacaaggacctgagcggaagtgtatcgtacagtagacggagtatctagtatagtctatagtccgtggaattaattctcatctttgacagcttatcatcgataagctagcttttcaattcaattcatcattttttttttattcttttttttgatttcggtttctttgaaatttttttgattcggtaatctccgaacagaaggaagaacgaaggaaggagcacagacttagattggtatatatacgcatatgtagtgttgaagaaacatgaaattgcccagtattcttaacccaactgcacagaacaaaaacctgcaggaaacgaagataaatcatgtcgaaagctacatataaggaacgtgctgctactcatcctagtcctgttgctgccaagctatttaatatcatgcacgaaaagcaaacaaacttgtgtgcttcattggatgttcgtaccaccaaggaattactggagttagttgaagcattaggtcccaaaatttgtttactaaaaacacatgtggatattttgactgatttttccatggagggcacagttaagccgctaaaggcattatccgccaagtacaattttttactcttcgaagacagaaaatttgctgacattggtaatacagtcaaattgcagtactctgcgggtgtatacagaatagcagaatgggcagacattacgaatgcacacggtgtggtgggcccaggtattgttagcggtttgaagcaggcggcagaagaagtaacaaaggaacctagaggccttttgatgttagcagaattgtcatgcaagggctccctatctactggagaatatactaagggtactgttgacattgcgaagagcgacaaagattttgttatcggctttattgctcaaagagacatgggtggaagagatgaaggttacgattggttgattatgacacccggtgtgggtttagatgacaagggagacgcattgggtcaacagtatagaaccgtggatgatgtggtctctacaggatctgacattattattgttggaagaggactatttgcaaagggaagggatgctaaggtagagggtgaacgttacagaaaagcaggctgggaagcatatttgagaagatgcggccagcaaaactaaaaaactgtattataagtaaatgcatgtatactaaactcacaaattagagcttcaatttaattatatcagttattacccctcatgaccaaaatcccttaacgtgagttttcgttccactgagcgtcagaccccgtagaaaagatcaaaggatcttcttgagatcctttttttctgcgcgtaatctgctgcttgcaaacaaaaaaaccaccgctaccagcggtggtttgtttgccggatcaagagctaccaactctttttccgaaggtaactggcttcagcagagcgcagataccaaatactgtccttctagtgtagccgtagttaggccaccacttcaagaactctgtagcaccgcctacatacctcgctctgctaatcctgttaccagtggctgctgccagtggcgataagtcgtgtcttaccgggttggactcaagacgatagttaccggataaggcgcagcggtcgggctgaacggggggttcgtgcacacagcccagcttggagcgaacgacctacaccgaactgagatacctacagcgtgagctatgagaaagcgccacgcttcccgaagggagaaaggcggacaggtatccggtaagcggcagggtcggaacaggagagcgcacgagggagcttccagggggaaacgcctggtatctttatagtcctgtcgggtttcgccacctctgacttgagcgtcgatttttgtgatgctcgtcaggggggcggagcctatggaaaaacgccagcaacgcggcctttttacggttcctggccttttgctggccttttgctcacatgttctttcctgcgttatcccctgattctgtggataaccgtattaccgcctttgagtgagctgataccgctcgccgcagccgaacgaccgagcgcagcgagtcagtgagcgaggaagcggaagagcgcctgatgcggtattttctccttacgcatctgtgcggtatttcacaccgcatatggtgcactctcagtacaatctgctctgatgccgcatagttaagccagataaaaaatttatttgctttcaggtacaattcttgatataatattatcatctagctagataataaaaatttaaggatcttatggtacttggtaaacctcaaacggatcctactctcgaatggttcttgtctcattgccacattcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtggcagtgctgatcaaagacgaagagggtaaagaaatgatcctctcctatctgaatcagggtgattttattggcgaactgggcctgtttgaagagggccaggaacgtagcgcatgggtacgtgcgaaaaccgcctgtgaagtggctgaaatttcgtacaaaaaatttcgccaattgattcaggtaaatccggat
    '''
    
    
    text8 = '''
    >5681 SEGUID JPjjayC2rXeAi4Jlju1WUlfqAvE
    gtcagcggccgcattgcacagactctgctgaatctggcaaaacaaccagacgctatgactcacccggacggcatgcaaatcaaaattacccgtcaggaaattggccagattgtcggctgctctagacaaaccgtgggacgaattcttaagatgctcgaggatcagaacctgatctccgcacacggtaaaaccatcgtcgtttacggcactcgttaatcccgtcggagtggcgcgttacctggtagcgcgaaaggctccttttggagcctttttttttagatctcgcgccattttgtttcccccgatgtggcgcagactgatttatcaccccgatcctcaggatctatggtgcactctcagtacaatctgctctgatgccgcatagttaagccagccccgacacccgccaacacccgctgacgcgccctgacgggcttgtctgctcccggcatccgcttacagacaagctgtgaccgtctccgggagctgcatgtgtcagaggttttcaccgtcatcaccgaaacgcgcgagacgaaagggcctcgtgatacgcctatttttataggttaatgtcatgataataatggtttcttagcaggtggcacttttcggggaaatgtgcgcggaacccctatttgtttatttttctaaatacattcaaatatgtatccgctcatgagacaataaccctgataaatgcttcaataatattgaaaaaggaagagtatgagtattcaacatttccgtgtcgcccttattcccttttttgcggcattttgccttcctgtttttgctcacccagaaacgctggtgaaagtaaaagatgctgaagatcagttgggtgcacgagtgggttacatcgaactggatctcaacagcggtaagatccttgagagttttcgccccgaagaacgttttccaatgatgagcacttttaaagttctgctatgtgatacactattatcccgtattgacgccgggcaagagcaactcggtcgccgcatacactattctcagaatgacttggttgagtactcaccagtcacagaaaagcatcttacggatggcatgacagtaagagaattatgcagtgctgccataaccatgagtgataacactgcggccaacttacttctgacaacgatcggaggaccgaaggagctaaccgcttttttgcacaacatgggggatcatgtaactcgccttgatcgttgggaaccggagctgaatgaagccataccaaacgacgagagtgacaccacgatgcctgtagcaatgccaacaacgttgcgcaaactattaactggcgaactacttactctagcttcccggcaacaattaatagactggatggaggcggataaagttgcaggaccacttctgcgctcggcccttccggctggctggtttattgctgataaatctggagccggtgagcgtgggtctcgcggtatcattgcagcactggggccagatggtaagcgctcccgtatcgtagttatctacacgacggggagtcaggcaactatggatgaacgaaatagacagatcgctgagataggtgcctcactgattaagcattggtaactgtcagaccaagtttactcatatatactttagattgatttaaaacttcatttttaatttaaaaggatctaggtgaagatcctttttgataataatcttcctgtttttggggcttttctgattatcaaccggggtggagcttcccattgcgaataccgcttccacaaacattgctcaaaagtatctctttgctatatatctctgtgctatatccctatataacctacccatccacctttcgctccttgaacttgcatctaaactcgacctctacattttttatgtttatctctagtattactctttagacaaaaaaattgtagtaagaactattcatagagtgaatcgaaaacaatacgaaaatgtaaacatttcctatacgtagtatatagagacaaaatagaagaaaccgttcataattttctgaccaatgaagaatcatcaacgctatcactttctgttcacaaagtatgcgcaatccacatcggtatagaatataatcggggatgcctttatcttgaaaaaatgcacccgcagcttcgctagtaatcagtaaacgcgggaagtggagtcaggctttttttatggaagagaaaatagacaccaaagtagccttcttctaaccttaacggacctacagtgcaaaaagttatcaagagactgcattatagagcgcacaaaggagaaaaaaagtaatctaagatgctttgttagaaaaatagcgctctcgggatgcatttttgtagaacaaaaaagaagtatagattctttgttggtaaaatagcgctctcgcgttgcatttctgttctgtaaaaatgcagctcagattctttgtttgaaaaattagcgctctcgtcgcgttgcatttttgttttacaaaaatgaagcacagattcttcgttggtaaaatagcgctttcgcgttgcatttctgttctgtaaaaatgcagctcagattctttgtttgaaaaattagcgctctcgcgttgcatttttgttctacaaaatgaagcacagatgcttcgttaacaaagatatgctattgaagtgcaagatggaaacgcagaaaatgaaccggggatgcgacgtgcaagattacctatgcaatagatgcaatagtttctccaggaaccgaaatacatacattgtcttccgtaaagcgctagactatatattattatacaggttcaaatatactatctgtttcagggaaaactcccaggttcggatgttcaaaattcaatgatgggtaacaagtacgatcgtaaatctgtaaaacagtttgtcggatattaggctgtatctcctcaaagcgtattcgaatatcattgagaagctgcagcgtcacatcggataataatgatggcagccattgtagaagtgccttttgcatttctagtctctttctcggtctagctagttttactacatcgcgaagatagaatcttagatcacactgcctttgctgagctggatcaatagagtaacaaaagagtggtaaggcctcgttaaaggacaaggacctgagcggaagtgtatcgtacagtagacggagtatctagtatagtctatagtccgtggaattaattctcatctttgacagcttatcatcgataagctagcttttcaattcaattcatcattttttttttattcttttttttgatttcggtttctttgaaatttttttgattcggtaatctccgaacagaaggaagaacgaaggaaggagcacagacttagattggtatatatacgcatatgtagtgttgaagaaacatgaaattgcccagtattcttaacccaactgcacagaacaaaaacctgcaggaaacgaagataaatcatgtcgaaagctacatataaggaacgtgctgctactcatcctagtcctgttgctgccaagctatttaatatcatgcacgaaaagcaaacaaacttgtgtgcttcattggatgttcgtaccaccaaggaattactggagttagttgaagcattaggtcccaaaatttgtttactaaaaacacatgtggatattttgactgatttttccatggagggcacagttaagccgctaaaggcattatccgccaagtacaattttttactcttcgaagacagaaaatttgctgacattggtaatacagtcaaattgcagtactctgcgggtgtatacagaatagcagaatgggcagacattacgaatgcacacggtgtggtgggcccaggtattgttagcggtttgaagcaggcggcagaagaagtaacaaaggaacctagaggccttttgatgttagcagaattgtcatgcaagggctccctatctactggagaatatactaagggtactgttgacattgcgaagagcgacaaagattttgttatcggctttattgctcaaagagacatgggtggaagagatgaaggttacgattggttgattatgacacccggtgtgggtttagatgacaagggagacgcattgggtcaacagtatagaaccgtggatgatgtggtctctacaggatctgacattattattgttggaagaggactatttgcaaagggaagggatgctaaggtagagggtgaacgttacagaaaagcaggctgggaagcatatttgagaagatgcggccagcaaaactaaaaaactgtattataagtaaatgcatgtatactaaactcacaaattagagcttcaatttaattatatcagttattacccctcatgaccaaaatcccttaacgtgagttttcgttccactgagcgtcagaccccgtagaaaagatcaaaggatcttcttgagatcctttttttctgcgcgtaatctgctgcttgcaaacaaaaaaaccaccgctaccagcggtggtttgtttgccggatcaagagctaccaactctttttccgaaggtaactggcttcagcagagcgcagataccaaatactgtccttctagtgtagccgtagttaggccaccacttcaagaactctgtagcaccgcctacatacctcgctctgctaatcctgttaccagtggctgctgccagtggcgataagtcgtgtcttaccgggttggactcaagacgatagttaccggataaggcgcagcggtcgggctgaacggggggttcgtgcacacagcccagcttggagcgaacgacctacaccgaactgagatacctacagcgtgagctatgagaaagcgccacgcttcccgaagggagaaaggcggacaggtatccggtaagcggcagggtcggaacaggagagcgcacgagggagcttccagggggaaacgcctggtatctttatagtcctgtcgggtttcgccacctctgacttgagcgtcgatttttgtgatgctcgtcaggggggcggagcctatggaaaaacgccagcaacgcggcctttttacggttcctggccttttgctggccttttgctcacatgttctttcctgcgttatcccctgattctgtggataaccgtattaccgcctttgagtgagctgataccgctcgccgcagccgaacgaccgagcgcagcgagtcagtgagcgaggaagcggaagagcgcctgatgcggtattttctccttacgcatctgtgcggtatttcacaccgcatatggtgcactctcagtacaatctgctctgatgccgcatagttaagccagataaaaaatttatttgctttcaggtacaattcttgatataatattatcatctagctagataataaaaatttaaggatcttatggtacttggtaaacctcaaacggatcctactctcgaatggttcttgtctcattgccacattcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtggcagtgctgatcaaagacgaagagggtaaagaaatgatcctctcctatctgaatcagggtgattttattggcgaactgggcctgtttgaagagggccaggaacgtagcgcatgggtacgtgcgaaaaccgcctgtgaagtggctgaaatttcgtacaaaaaatttcgccaattgattcaggtaaatccggat
        
    >630 SEGUID 3GE7aiThG66A-DHF-12fiDtQJ0k
    TCCTGACGGGTAATTTTGATTTGCATGCCGTCCGGGTGAGTCATAGCGTCTGGTTGTTTTGCCAGATTCAGCAGAGTCTGTGCAATGCGGCCGCTGACCACATACGATTTAGGTGACACTATAGAACGCGGCCGCCAGCTGAAGCTTCGTACGCTGCAGGTCGACGGATCCCCGGGTTAATTAAGGCGCGCCAGATCTGTTTAGCTTGCCTTGTCCCCGCCGGGTCACCCGGCCAGCGACATGGAGGCCCAGAATACCCTCCTTGACAGTCTTGACGTGCGCAGCTCAGGGGCATGATGTGACTGTCGCCCGTACATTTAGCCCATACATCCCCATGTATAATCATTTGCATCCATACATTTTGATGGCCGCACGGCGCGAAGCAAAAATTACGGCTCCTCGCTGCAGACCTGCGAGCAGGGAAACGCTCCCCTCACAGACGCGTTGAATTGTCCCCACGCCGCGCCCCTGTAGAGAAATATAAAAGGTTAGGATTTGCCACTGAGGTTCTTCTTTCATATACTTCCTTTTAAAATCTTGCTAGGATACAGTTCTCACATCACATCCGAACATAAACAACCGTCGAGGAACGCCAGGTTGCCCACTTTCTCACTAGTGACCTGCAGCCGG
    
    >1196 SEGUID Bl-131D4eiLsj4bR3f6fue0gXik
    gtcgaggaacgccaggttgcccactttctcactagtgacctgcagccggccaatcacatcacatccgaacataaacaaccatgggtaaaaagcctgaactcaccgcgacgtctgtcgagaagtttctgatcgaaaagttcgacagcgtctccgacctgatgcagctctcggagggcgaagaatctcgtgctttcagcttcgatgtaggagggcgtggatatgtcctgcgggtaaatagctgcgccgatggtttctacaaagatcgttatgtttatcggcactttgcatcggccgcgctcccgattccggaagtgcttgacattggggaattcagcgagagcctgacctattgcatctcccgccgtgcacagggtgtcacgttgcaagacctgcctgaaaccgaactgcccgctgttctgcagccggtcgcggaggccatggatgcgatcgctgcggccgatcttagccagacgagcgggttcggcccattcggaccgcaaggaatcggtcaatacactacatggcgtgatttcatatgcgcgattgctgatccccatgtgtatcactggcaaactgtgatggacgacaccgtcagtgcgtccgtcgcgcaggctctcgatgagctgatgctttgggccgaggactgccccgaagtccggcacctcgtgcacgcggatttcggctccaacaatgtcctgacggacaatggccgcataacagcggtcattgactggagcgaggcgatgttcggggattcccaatacgaggtcgccaacatcttcttctggaggccgtggttggcttgtatggagcagcagacgcgctacttcgagcggaggcatccggagcttgcaggatcgccgcggctccgggcgtatatgctccgcattggtcttgaccaactctatcagagcttggttgacggcaatttcgatgatgcagcttgggcgcagggtcgatgcgacgcaatcgtccgatccggagccgggactgtcgggcgtacacaaatcgcccgcagaagcgcggccgtctggaccgatggctgtgtagaagtactcgccgatagtggaaaccgacgccccagcactcgtccgagggcaaaggaataatcagtactgacaataaaaagattcttgtagggataacagggtaatcggacgcgccatctgtgcagacaaacgcatcaggatttaaat

    >650 SEGUID 8lAwzHM60BkV1hhzx3_bBsfAIYo
    cgcgccatctgtgcagacaaacgcatcaggatagagtcttttgtaacgaccccgtctccaccaacttggtatgcttgaaatctcaaggccattacacattcagttatgtgaacgaaaggtctttatttaacgtagcataaactaaataatacaggttccggttagcctgcaatgtgttaaatctaaaggagcatacccaaaatgaactgaagacaaggaaatttgcttgtccagatgtgattgagcatttgaacgttaataacataacatttttatacttaactatagaaagacttgtataaaaactggcaaacgagatattctgaatattggtgcatatttcaggtagaaaagcttacaaaacaatctaatcataatattgagatgaagagaaagataaaagaaaaaacgataagtcagatgagattatgattgtactttgaaatcgaggaacaaagtatatacggtagtagttccccgagttataacgggagatcatgtaaattgagaaaccagataaagatttggtatgcactctagcaagaaaataaaatgatgaatctatgatatagatcacttttgttccagcatccggatttacctgaatcaattggcgaaattttttgtacgaaatttcagccacttcacag
    '''    

    ## text1

    list_of_formatted_seq_records = parse(text1)
    a=assembly.Assembly(list_of_formatted_seq_records, limit=25)

    assert repr(a) == '''## Assembly object ##
fragments....: 632bp 740bp 650bp
limit(bp)....: 25
G.nodes......: 10
algorithm....: common_sub_strings
linear(2)....: -1933 -1852
circular(1)..: o81'''

    candidate = a.linear_products[0]
    correct = 'TCCTGACGGGTAATTTTGATTTGCATGCCGTCCGGGTGAGTCATAGCGTCTGGTTGTTTTGCCAGATTCAGCAGAGTCTGTGCAATGCGGCCGCTGACcacatacgatttaggtgacactatagaacGCGGCCGCCAGCTGAAGCTTCGTACGCTGCAGGTCGACGGATCCCCGGGTTAATTAAGGCGCGCCAGATCTGTTTAGCTTGCCTTGTCCCCGCCGGGTCACCCGGCCAGCGACATGGAGGCCCAGAATACCCTCCTTGACAGTCTTGACGTGCGCAGCTCAGGGGCATGATGTGACTGTCGCCCGTACATTTAGCCCATACATCCCCATGTATAATCATTTGCATCCATACATTTTGATGGCCGCACGGCGCGAAGCAAAAATTACGGCTCCTCGCTGCAGACCTGCGAGCAGGGAAACGCTCCCCTCACAGACGCGTTGAATTGTCCCCACGCCGCGCCCCTGTAGAGAAATATAAAAGGTTAGGATTTGCCACTGAGGTTCTTCTTTCATATACTTCCTTTTAAAATCTTGCTAGGATACAGTTCTCACATcacatccgaacataaacaaccGTCGAGGAACGCCAGGTTGCCCACTTTctcactagtgacctgcagccgACCCAAtcacatcacatccgaacataaacaaccatgGGTACCACTCTTGACGACACGGCTTACCGGTACCGCACCAGTGTCCCGGGGGACGCCGAGGCCATCGAGGCACTGGATGGGTCCTTCACCACCGACACCGTCTTCCGCGTCACCGCCACCGGGGACGGCTTCACCCTGCGGGAGGTGCCGGTGGACCCGCCCCTGACCAAGGTGTTCCCCGACGACGAATCGGACGACGAATCGGACGACGGGGAGGACGGCGACCCGGACTCCCGGACGTTCGTCGCGTACGGGGACGACGGCGACCTGGCGGGCTTCGTGGTCGTCTCGTACTCCGGCTGGAACCGCCGGCTGACCGTCGAGGACATCGAGGTCGCCCCGGAGCACCGGGGGCACGGGGTCGGGCGCGCGTTGATGGGGCTCGCGACGGAGTTCGCCCGCGAGCGGGGCGCCGGGCACCTCTGGCTGGAGGTCACCAACGTCAACGCACCGGCGATCCACGCGTACCGGCGGATGGGGTTCACCCTCTGCGGCCTGGACACCGCCCTGTACGACGGCACCGCCTCGGACGGCGAGCAGGCGCTCTACATGAGCATGCCCTGCCCCtaatcagtactgacaataaaaagattcttgTAGGGATAACAGGGTAATCGGAGTGCCATCTGTGCAGACAAACGCATCAGGATagagtcttttgtaacgacccCGTCTCCACCAACTTGGTATGCTTGAAATCTCAAGGCCATTACACATTCAGTTATGTGAACGAAAGGTCTTTATTTAACGTAGCATAAACTAAATAATACAGGTTCCGGTTAGCCTGCAATGTGTTAAATCTAAAGGAGCATACCCAAAATGAACTGAAGACAAGGAAATTTGCTTGTCCAGATGTGATTGAGCATTTGAACGTTAATAACATAACATTTTTATACTTAACTATAGAAAGACTTGTATAAAAACTGGCAAACGAGATATTCTGAATATTGGTGCATATTTCAGGTAGAAAAGCTTACAAAACAATCTAATCATAATATTGAGATGAAGAGAAAGATAAAAGAAAAAACGATAAGTCAGATGAGATTATGATTGTACTTTGAAATCGAGGAACAAAGTATATACGGTAGTAGTTCCCCGAGTTATAACGGGAGATCATGTAAATTGAGAAACCAGATAAAGATTTGGTATGCACTCTAGCAAGAAAATAAAATGATGAATCTATGAtatagatcacttttgttccagcATCCGGATTTACCTGAATCAATTGGCGAAATTTTTTGTACGAAATTTCAGCCACTTCACAG'
    assert len(correct)==1933
    assert eq(correct,candidate, circular=True)
    
    ## text2

    list_of_formatted_seq_records = parse(text2)
    a=assembly.Assembly(list_of_formatted_seq_records, limit=25)

    candidate = a.circular_products[0]
    correct = 'TTCTAGAACTAGTGGATCCCCCGGGCTGCAGATGAGTGAAGGCCCCGTCAAATTCGAAAAAAATACCGTCATATCTGTCTTTGGTGCGTCAGGTGATCTGGCAAAGAAGAAGACTTTTCCCGCCTTATTTGGGCTTTTCAGAGAAGGTTACCTTGATCCATCTACCAAGATCTTCGGTTATGCCCGGTCCAAATTGTCCATGGAGGAGGACCTGAAGTCCCGTGTCCTACCCCACTTGAAAAAACCTCACGGTGAAGCCGATGACTCTAAGGTCGAACAGTTCTTCAAGATGGTCAGCTACATTTCGGGAAATTACGACACAGATGAAGGCTTCGACGAATTAAGAACGCAGATCGAGAAATTCGAGAAAAGTGCCAACGTCGATGTCCCACACCGTCTCTTCTATCTGGCCTTGCCGCCAAGCGTTTTTTTGACGGTGGCCAAGCAGATCAAGAGTCGTGTGTACGCAGAGAATGGCATCACCCGTGTAATCGTAGAGAAACCTTTCGGCCACGACCTGGCCTCTGCCAGGGAGCTGCAAAAAAACCTGGGGCCCCTCTTTAAAGAAGAAGAGTTGTACAGAATTGACCATTACTTGGGTAAAGAGTTGGTCAAGAATCTTTTAGTCTTGAGGTTCGGTAACCAGTTTTTGAATGCCTCGTGGAATAGAGACAACATTCAAAGCGTTCAGATTTCGTTTAAAGAGAGGTTCGGCACCGAAGGCCGTGGCGGCTATTTCGACTCTATAGGCATAATCAGAGACGTGATGCAGAACCATCTGTTACAAATCATGACTCTCTTGACTATGGAAAGACCGGTGTCTTTTGACCCGGAATCTATTCGTGACGAAAAGGTTAAGGTTCTAAAGGCCGTGGCCCCCATCGACACGGACGACGTCCTCTTGGGCCAGTACGGTAAATCTGAGGACGGGTCTAAGCCCGCCTACGTGGATGATGACACTGTAGACAAGGACTCTAAATGTGTCACTTTTGCAGCAATGACTTTCAACATCGAAAACGAGCGTTGGGAGGGCGTCCCCATCATGATGCGTGCCGGTAAGGCTTTGAATGAGTCCAAGGTGGAGATCAGACTGCAGTACAAAGCGGTCGCATCGGGTGTCTTCAAAGACATTCCAAATAACGAACTGGTCATCAGAGTGCAGCCCGATGCCGCTGTGTACCTAAAGTTTAATGCTAAGACCCCTGGTCTGTCAAATGCTACCCAAGTCACAGATCTGAATCTAACTTACGCAAGCAGGTACCAAGACTTTTGGATTCCAGAGGCTTACGAGGTGTTGATAAGAGACGCCCTACTGGGTGACCATTCCAACTTTGTCAGAGATGACGAATTGGATATCAGTTGGGGCATATTCACCCCATTACTGAAGCACATAGAGCGTCCGGACGGTCCAACACCGGAAATTTACCCCTACGGATCAAGAGGTCCAAAGGGATTGAAGGAATATATGCAAAAACACAAGTATGTTATGCCCGAAAAGCACCCTTACGCTTGGCCCGTGACTAAGCCAGAAGATACGAAGGATAATTAGCTGCAGGAATTCGATATCAAGCTTATCGATACCGTCGACCTCGAGTCATGTAATTAGTTATGTCACGCTTACATTCACGCCCTCCCCCCACATCCGCTCTAACCGAAAAGGAAGGAGTTAGACAACCTGAAGTCTAGGTCCCTATTTATTTTTTTATAGTTATGTTAGTATTAAGAACGTTATTTATATTTCAAATTTTTCTTTTTTTTCTGTACAGACGCGTGTACGCATGTAACATTATACTGAAAACCTTGCTTGAGAAGGTTTTGGGACGCTCGAAGGCTTTAATTTGCGGCCGGTACCCAATTCGCCCTATAGTGAGTCGTATTACGCGCGCTCACTGGCCGTCGTTTTACAACGTCGTGACTGGGAAAACCCTGGCGTTACCCAACTTAATCGCCTTGCAGCACATCCCCCTTTCGCCAGCTGGCGTAATAGCGAAGAGGCCCGCACCGATCGCCCTTCCCAACAGTTGCGCAGCCTGAATGGCGAATGGCGCGACGCGCCCTGTAGCGGCGCATTAAGCGCGGCGGGTGTGGTGGTTACGCGCAGCGTGACCGCTACACTTGCCAGCGCCCTAGCGCCCGCTCCTTTCGCTTTCTTCCCTTCCTTTCTCGCCACGTTCGCCGGCTTTCCCCGTCAAGCTCTAAATCGGGGGCTCCCTTTAGGGTTCCGATTTAGTGCTTTACGGCACCTCGACCCCAAAAAACTTGATTAGGGTGATGGTTCACGTAGTGGGCCATCGCCCTGATAGACGGTTTTTCGCCCTTTGACGTTGGAGTCCACGTTCTTTAATAGTGGACTCTTGTTCCAAACTGGAACAACACTCAACCCTATCTCGGTCTATTCTTTTGATTTATAAGGGATTTTGCCGATTTCGGCCTATTGGTTAAAAAATGAGCTGATTTAACAAAAATTTAACGCGAATTTTAACAAAATATTAACGTTTACAATTTCCTGATGCGGTATTTTCTCCTTACGCATCTGTGCGGTATTTCACACCGCATATCGACGGTCGAGGAGAACTTCTAGTATATCCACATACCTAATATTATTGCCTTATTAAAAATGGAATCCCAACAATTACATCAAAATCCACATTCTCTTCAAAATCAATTGTCCTGTACTTCCTTGTTCATGTGTGTTCAAAAACGTTATATTTATAGGATAATTATACTCTATTTCTCAACAAGTAATTGGTTGTTTGGCCGAGCGGTCTAAGGCGCCTGATTCAAGAAATATCTTGACCGCAGTTAACTGTGGGAATACTCAGGTATCGTAAGATGCAAGAGTTCGAATCTCTTAGCAACCATTATTTTTTTCCTCAACATAACGAGAACACACAGGGGCGCTATCGCACAGAATCAAATTCGATGACTGGAAATTTTTTGTTAATTTCAGAGGTCGCCTGACGCATATACCTTTTTCAACTGAAAAATTGGGAGAAAAAGGAAAGGTGAGAGGCCGGAACCGGCTTTTCATATAGAATAGAGAAGCGTTCATGACTAAATGCTTGCATCACAATACTTGAAGTTGACAATATTATTTAAGGACCTATTGTTTTTTCCAATAGGTGGTTAGCAATCGTCTTACTTTCTAACTTTTCTTACCTTTTACATTTCAGCAATATATATATATATTTCAAGGATATACCATTCTAATGTCTGCCCCTATGTCTGCCCCTAAGAAGATCGTCGTTTTGCCAGGTGACCACGTTGGTCAAGAAATCACAGCCGAAGCCATTAAGGTTCTTAAAGCTATTTCTGATGTTCGTTCCAATGTCAAGTTCGATTTCGAAAATCATTTAATTGGTGGTGCTGCTATCGATGCTACAGGTGTCCCACTTCCAGATGAGGCGCTGGAAGCCTCCAAGAAGGTTGATGCCGTTTTGTTAGGTGCTGTGGCTGGTCCTAAATGGGGTACCGGTAGTGTTAGACCTGAACAAGGTTTACTAAAAATCCGTAAAGAACTTCAATTGTACGCCAACTTAAGACCATGTAACTTTGCATCCGACTCTCTTTTAGACTTATCTCCAATCAAGCCACAATTTGCTAAAGGTACTGACTTCGTTGTTGTCAGAGAATTAGTGGGAGGTATTTACTTTGGTAAGAGAAAGGAAGACGATGGTGATGGTGTCGCTTGGGATAGTGAACAATACACCGTTCCAGAAGTGCAAAGAATCACAAGAATGGCCGCTTTCATGGCCCTACAACATGAGCCACCATTGCCTATTTGGTCCTTGGATAAAGCTAATCTTTTGGCCTCTTCAAGATTATGGAGAAAAACTGTGGAGGAAACCATCAAGAACGAATTCCCTACATTGAAGGTTCAACATCAATTGATTGATTCTGCCGCCATGATCCTAGTTAAGAACCCAACCCACCTAAATGGTATTATAATCACCAGCAACATGTTTGGTGATATCATCTCCGATGAAGCCTCCGTTATCCCAGGTTCCTTGGGTTTGTTGCCATCTGCGTCCTTGGCCTCTTTGCCAGACAAGAACACCGCATTTGGTTTGTACGAACCATGCCACGGTTCTGCTCCAGATTTGCCAAAGAATAAGGTTGACCCTATCGCCACTATCTTGTCTGCTGCAATGATGTTGAAATTGTCATTGAACTTGCCTGAAGAAGGTAAGGCCATTGAAGATGCAGTTAAAAAGGTTTTGGATGCAGGTATCAGAACTGGTGATTTAGGTGGTTCCAACAGTACCACCGAAGTCGGTGATGCTGTCGCCGAAGAAGTTAAGAAAATCCTTGCTTAAAAAGATTCTCTTTTTTTATGATATTTGTACATAAACTTTATAAATGAAATTCATAATAGAAACGACACGAAATTACAAAATGGAATATGTTCATAGGGTAGACGAAACTATATACGCAATCTACATACATTTATCAAGAAGGAGAAAAAGGAGGATAGTAAAGGAATACAGGTAAGCAAATTGATACTAATGGCTCAACGTGATAAGGAAAAAGAATTGCACTTTAACATTAATATTGACAAGGAGGAGGGCACCACACAAAAAGTTAGGTGTAACAGAAAATCATGAAACTACGATTCCTAATTTGATATTGGAGGATTTTCTCTAAAAAAAAAAAAATACAACAAATAAAAAACACTCAATGACCTGACCATTTGATGGAGTTTAAGTCAATACCTTCTTGAAGCATTTCCCATAATGGTGAAAGTTCCCTCAAGAATTTTACTCTGTCAGAAACGGCCTTACGACGTAGTCGATATGGTGCACTCTCAGTACAATCTGCTCTGATGCCGCATAGTTAAGCCAGCCCCGACACCCGCCAACACCCGCTGACGCGCCCTGACGGGCTTGTCTGCTCCCGGCATCCGCTTACAGACAAGCTGTGACCGTCTCCGGGAGCTGCATGTGTCAGAGGTTTTCACCGTCATCACCGAAACGCGCGAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGATAATAATGGTTTCTTAGTATGATCCAATATCAAAGGAAATGATAGCATTGAAGGATGAGACTAATCCAATTGAGGAGTGGCAGCATATAGAACAGCTAAAGGGTAGTGCTGAAGGAAGCATACGATACCCCGCATGGAATGGGATAATATCACAGGAGGTACTAGACTACCTTTCATCCTACATAAATAGACGCATATAAGTACGCATTTAAGCATAAACACGCACTATGCCGTTCTTCTCATGTATATATATATACAGGCAACACGCAGATATAGGTGCGACGTGAACAGTGAGCTGTATGTGCGCAGCTCGCGTTGCATTTTCGGAAGCGCTCGTTTTCGGAAACGCTTTGAAGTTCCTATTCCGAAGTTCCTATTCTCTAGAAAGTATAGGAACTTCAGAGCGCTTTTGAAAACCAAAAGCGCTCTGAAGACGCACTTTCAAAAAACCAAAAACGCACCGGACTGTAACGAGCTACTAAAATATTGCGAATACCGCTTCCACAAACATTGCTCAAAAGTATCTCTTTGCTATATATCTCTGTGCTATATCCCTATATAACCTACCCATCCACCTTTCGCTCCTTGAACTTGCATCTAAACTCGACCTCTACATTTTTTATGTTTATCTCTAGTATTACTCTTTAGACAAAAAAATTGTAGTAAGAACTATTCATAGAGTGAATCGAAAACAATACGAAAATGTAAACATTTCCTATACGTAGTATATAGAGACAAAATAGAAGAAACCGTTCATAATTTTCTGACCAATGAAGAATCATCAACGCTATCACTTTCTGTTCACAAAGTATGCGCAATCCACATCGGTATAGAATATAATCGGGGATGCCTTTATCTTGAAAAAATGCACCCGCAGCTTCGCTAGTAATCAGTAAACGCGGGAAGTGGAGTCAGGCTTTTTTTATGGAAGAGAAAATAGACACCAAAGTAGCCTTCTTCTAACCTTAACGGACCTACAGTGCAAAAAGTTATCAAGAGACTGCATTATAGAGCGCACAAAGGAGAAAAAAAGTAATCTAAGATGCTTTGTTAGAAAAATAGCGCTCTCGGGATGCATTTTTGTAGAACAAAAAAGAAGTATAGATTCTTTGTTGGTAAAATAGCGCTCTCGCGTTGCATTTCTGTTCTGTAAAAATGCAGCTCAGATTCTTTGTTTGAAAAATTAGCGCTCTCGCGTTGCATTTTTGTTTTACAAAAATGAAGCACAGATTCTTCGTTGGTAAAATAGCGCTTTCGCGTTGCATTTCTGTTCTGTAAAAATGCAGCTCAGATTCTTTGTTTGAAAAATTAGCGCTCTCGCGTTGCATTTTTGTTCTACAAAATGAAGCACAGATGCTTCGTTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTTAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACGATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAACTGTCAGACCAAGTTTACTCATATATACTTTAGATTGATTTAAAACTTCATTTTTAATTTAAAAGGATCTAGGTGAAGATCCTTTTTGATAATCTCATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAGATCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAATACTGTCCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGATACCGCTCGCCGCAGCCGAACGACCGAGCGCAGCGAGTCAGTGAGCGAGGAAGCGGAAGAGCGCCCAATACGCAAACCGCCTCTCCCCGCGCGTTGGCCGATTCATTAATGCAGCTGGCACGACAGGTTTCCCGACTGGAAAGCGGGCAGTGAGCGCAACGCAATTAATGTGAGTTACCTCACTCATTAGGCACCCCAGGCTTTACACTTTATGCTTCCGGCTCCTATGTTGTGTGGAATTGTGAGCGGATAACAATTTCACACAGGAAACAGCTATGACCATGATTACGCCAAGCGCGCAATTAACCCTCACTAAAGGGAACAAAAGCTGGAGCTCAGTTTATCATTATCAATACTCGCCATTTCAAAGAATACGTAAATAATTAATAGTAGTGATTTTCCTAACTTTATTTAGTCAAAAAATTAGCCTTTTAATTCTGCTGTAACCCGTACATGCCCAAAATAGGGGGCGGGTTACACAGAATATATAACATCGTAGGTGTCTGGGTGAACAGTTTATTCCTGGCATCCACTAAATATAATGGAGCCCGCTTTTTAAGCTGGCATCCAGAAAAAAAAAGAATCCCAGCACCAAAATATTGTTTTCTTCACCAACCATCAGTTCATAGGTCCATTCTCTTAGCGCAACTACAGAGAACAGGGGCACAAACAGGCAAAAAACGGGCACAACCTCAATGGAGTGATGCAACCTGCCTGGAGTAAATGATGACACAAGGCAATTGACCCACGCATGTATCTATCTCATTTTCTTACACCTTCTATTACCTTCTGCTCTCTCTGATTTGGAAAAAGCTGAAAAAAAAGGTTGAAACCAGTTCCCTGAAATTATTCCCCTACTTGACTAATAAGTATATAAAGACGGTAGGTATTGATTGTAATTCTGTAAATCTATTTCTTAAACTTCTTAAATTCTACTTTTATAGTTAGTCTTTTTTTTAGTTTTAAAACACCAGAACTTAGTTTCGACGGA'
    assert len(correct)==9253
    assert eq(correct,candidate, circular=True)


    ## text3
    y,x = parse(text3)
    a=assembly.Assembly((x,y,x), limit=25)

    candidate = a.linear_products[0]
    correct = "GAGGCACCAGCGTCAGCATTTTCAAAGGTGTGTTCTTCGTCAGACATGTTTTAGTGTGTGAATGAAATAGGTGTATGTTTTCTTTTTGCTAGACAATAATTAGGAACAAGGTAAGGGAACTAAAGTGTAGAATAAGATTAAAAAAGAAGAACAAGTTGAAAAGGCAAGTTGAAATTTCAAGAAAAAAGTCAATTGAAGTACAGTAAATTGACCTGAATATATCTGAGTTCCGACAACAATGAGTTTACCAAAGAGAACAATGGAATAGGAAACTTTGAACGAAGAAAGGAAAGCAGGAAAGGAAAAAATTTTTAGGCTCGAGAACAATAGGGCGAAAAAACAGGCAACGAACGAACAATGGAAAAACGAAAAAAAAAAAAAAAAACACAGAAAAGAATGCAGAAAGATGTCAACTGAAAAAAAAAAAGGTGAACACAGGAAAAAAAATAAAAAAAAAAAAAAAAAAAGGAGGACGAAACAAAAAAGTGAAAAAAAATGAAAATTTTTTTGGAAAACCAAGAAATGAATTATATTTCCGTGTGAGACGACATCGTCGAATATGATTCAGGGTAACAGTATTGATGTAATCAATTTCCTACCTGAATCTAAAATTCCCGGGAGCAAGATCAAGATGTTTTCACCGATCTTTCCGGTCTCTTTGGCCGGGGTTTACGGACGATGGCAGAAGACCAAAGCGCCAGTTCATTTGGCGAGCGTTGGTTGGTGGATCAAGCCCACGCGTAGGCAATCCTCGAGCAGATCCGCCAGGCGTGTATATATAGCGTGGATGGCCAGGCAACTTTAGTGCTGACACATACAGGCATATATATATGTGTGCGACGACACATGATCATATGGCATGCATGTGCTCTGTATGTATATAAAACTCTTGTTTTCTTCTTTTCTCTAAATATTCTTTCCTTATACATTAGGACCTTTGCAGCATAAATTACTATACTTCTATAGACACACAAACACAAATACACACACTAAATTAATAATGGATGTCCACGAGGTCTCTATATCGGGATCAGCCTGCCTCGTACGCTGCAGGTCGACGGATCCCCGGGTTAATTAAGGCGCGCCAGATCTGTTTAGCTTGCCTCGTCCCCGCCGGGTCACCCGGCCAGCGACATGGAGGCCCAGAATACCCTCCTTGACAGTCTTGACGTGCGCAGCTCAGGGGCATGATGTGACTGTCGCCCGTACATTTAGCCCATACATCCCCATGTATAATCATTTGCATCCATACATTTTGATGGCCGCACGGCGCGAAGCAAAAATTACGGCTCCTCGCTGCAGACCTGCGAGCAGGGAAACGCTCCCCTCACAGACGCGTTGAATTGTCCCCACGCCGCGCCCCTGTAGAGAAATATAAAAGGTTAGGATTTGCCACTGAGGTTCTTCTTTCATATACTTCCTTTTAAAATCTTGCTAGGATACAGTTCTCACATCACATCCGAACATAAACAACCATGGGTAAGGAAAAGACTCACGTTTCGAGGCCGCGATTAAATTCCAACATGGATGCTGATTTATATGGGTATAAATGGGCTCGCGATAATGTCGGGCAATCAGGTGCGACAATCTATCGATTGTATGGGAAGCCCGATGCGCCAGAGTTGTTTCTGAAACATGGCAAAGGTAGCGTTGCCAATGATGTTACAGATGAGATGGTCAGACTAAACTGGCTGACGGAATTTATGCCTCTTCCGACCATCAAGCATTTTATCCGTACTCCTGATGATGCATGGTTACTCACCACTGCGATCCCCGGCAAAACAGCATTCCAGGTATTAGAAGAATATCCTGATTCAGGTGAAAATATTGTTGATGCGCTGGCAGTGTTCCTGCGCCGGTTGCATTCGATTCCTGTTTGTAATTGTCCTTTTAACAGCGATCGCGTATTTCGTCTCGCTCAGGCGCAATCACGAATGAATAACGGTTTGGTTGATGCGAGTGATTTTGATGACGAGCGTAATGGCTGGCCTGTTGAACAAGTCTGGAAAGAAATGCATAAGCTTTTGCCATTCTCACCGGATTCAGTCGTCACTCATGGTGATTTCTCACTTGATAACCTTATTTTTGACGAGGGGAAATTAATAGGTTGTATTGATGTTGGACGAGTCGGAATCGCAGACCGATACCAGGATCTTGCCATCCTATGGAACTGCCTCGGTGAGTTTTCTCCTTCATTACAGAAACGGCTTTTTCAAAAATATGGTATTGATAATCCTGATATGAATAAATTGCAGTTTCATTTGATGCTCGATGAGTTTTTCTAATCAGTACTGACAATAAAAAGATTCTTGTTTTCAAGAACTTGTCATTTGTATAGTTTTTTTATATTGTAGTTGTTCTATTTTAATCAAATGTTAGCGTGATTTATATTTTTTTTCGCCTCGACATCATCTGCCCAGATGCGAAGTTAAGTGCGCAGAAAGTAATATCATGCGTCAATCGTATGTGAATGCTGGTCGCTATACTGCTGTCGATTCGATACTAACGCCGCCATCCAGTGTCGAAAACGAGCTCGAATTCATCGATGAGCATCCTTATAGCCTCTTCTACGAGACCGACACCGTAAACAGGCCCCTTTTCCTTTGTCGATATCATGTAATTAGTTATGTCACGCTTACATTCACGCCCTCCTCCCACATCCGCTCTAACCGAAAAGGAAGGAGTTAGACAACCTGAAGTCTAGGTCCCTATTTATTTTTTTTAATAGTTATGTTAGTATTAAGAACGTTATTTATATTTCAAATTTTTCTTTTTTTTCTGTACAAACGCGTGTACGCATGTAACATTATACTGAAAACCTTGCTTGAGAAGGTTTTGGGACGCTCGAAGGCTTTAATTTGCAAGCTTCGCAGTTTACACTCTCATCGTCGCTCTCATCATCGCTTCCGTTGTTGTTTTCCTTAGTAGCGTCTGCTTCCAGAGAGTATTTATCTCTTATTACCTCTAAAGGTTCTGCTTGATTTCTGACTTTGTTCGCCTCATGTGCATATTTTTCTTGGTTCTTTTGGGACAAAATATGCGTAAAGGACTTTTGTTGTTCCCTCACATTCCAGTTTAGTTGTCGACTGATACTGTTAATAAACTCATCGGGCGAGGCTTCCACGGTTGGAAAAGCATATGGGCTGGCGCATATGGTTATAAAATCACCTTTTTGCAATTCAATTCTATCTTTCCCATCAAAAGCCGCCCATGCTGGAGCCCTTGACTTCATCGAGACTTTCACTTTTAAATTTATACTTTCTGGTAAGATGATGGGTCTGAAACTCAATGCATGTGGACAAATGGGTGTTAAAGCGATTGCATTGACGGTTGGGCATACCAATGACCCACCTGCACTCAAAGAATAGGCCGTGGACCCAGTCGGAGTAGCAGCAATCAGTCCGTCCGCCTGCGCAACGGTCATTAATGAGCCGTCACCATACAATTCTAACATGGATAGAAAAGGACTTGGACCACGATCGATGGTCACTTCGTTCAAAATGTGGTGTGTGCTTAGTTTTTCCACCACACATATTTTCTTCCCCGTGTTTGGGTCTACTTCAGGGCGGTGTCTACGATAAATTGTG"
    assert eq(correct,candidate, linear=True)

    ## text4
    x,y = parse(text4)
    a=assembly.Assembly((x,y),limit=557)
    assert a.linear[0].lseguid() == "EC5pU87OEIjuNpG7jiARzFwLabc"
    a=assembly.Assembly((y,x),limit=557)
    assert a.linear[0].lseguid() == "EC5pU87OEIjuNpG7jiARzFwLabc"
    a=assembly.Assembly((x.rc(),y),limit=557)
    assert a.linear[0].lseguid() == "EC5pU87OEIjuNpG7jiARzFwLabc"
    a=assembly.Assembly((x,y.rc()),limit=557)
    assert a.linear[0].lseguid() == "EC5pU87OEIjuNpG7jiARzFwLabc"
    a=assembly.Assembly((x.rc(),y.rc()),limit=557)
    assert a.linear[0].lseguid() == "EC5pU87OEIjuNpG7jiARzFwLabc"
    
    candidate = a.linear_products[0]
    correct = 'tcctgacgggtaattttgatttgcatgccgtccgggtgagtcatagcgtctggttgttttgccagattcagcagagtctgtgcaatgcggccgctgaccacatacgatttaggtgacactatagaacgcggccgccagctgaagcttcgtacgctgcaggtcgacggatccccgggttaattaaggcgcgccagatctgtttagcttgccttgtccccgccgggtcacccggccagcgacatggaggcccagaataccctccttgacagtcttgacgtgcgcagctcaggggcatgatgtgactgtcgcccgtacatttagcccatacatccccatgtataatcatttgcatccatacattttgatggccgcacggcgcgaagcaaaaattacggctcctcgctgcagacctgcgagcagggaaacgctcccctcacagacgcgttgaattgtccccacgccgcgcccctgtagagaaatataaaaggttaggatttgccactgaggttcttctttcatatacttccttttaaaatcttgctaggatacagttctcacatcacatccgaacataaacaaccgtcgaggaacgccaggttgcccactttctcactagtgacctgcagccgacccaatcacatcacatccgaacataaacaaccatgggtaaaaagcctgaactcaccgcgacgtctgtcgagaagtttctgatcgaaaagttcgacagcgtctccgacctgatgcagctctcggagggcgaagaatctcgtgctttcagcttcgatgtaggagggcgtggatatgtcctgcgggtaaatagctgcgccgatggtttctacaaagatcgttatgtttatcggcactttgcatcggccgcgctcccgattccggaagtgcttgacattggggaattcagcgagagcctgacctattgcatctcccgccgtgcacagggtgtcacgttgcaagacctgcctgaaaccgaactgcccgctgttctgcagccggtcgcggaggccatggatgcgatcgctgcggccgatcttagccagacgagcgggttcggcccattcggaccgcaaggaatcggtcaatacactacatggcgtgatttcatatgcgcgattgctgatccccatgtgtatcactggcaaactgtgatggacgacaccgtcagtgcgtccgtcgcgcaggctctcgatgagctgatgctttgggccgaggactgccccgaagtccggcacctcgtgcacgcggatttcggctccaacaatgtcctgacggacaatggccgcataacagcggtcattgactggagcgaggcgatgttcggggattcccaatacgaggtcgccaacatcttcttctggaggccgtggttggcttgtatggagcagcagacgcgctacttcgagcggaggcatccggagcttgcaggatcgccgcggctccgggcgtatatgctccgcattggtcttgaccaactctatcagagcttggttgacggcaatttcgatgatgcagcttgggcgcagggtcgatgcgacgcaatcgtccgatccggagccgggactgtcgggcgtacacaaatcgcccgcagaagcgcggccgtctggaccgatggctgtgtagaagtactcgccgatagtggaaaccgacgccccagcactcgtccgagggcaaaggaataatcagtactgacaataaaaagattcttgtagggataacagggtaatcggagtgccatctgtgcagacaaacgcatcaggatagagtcttttgtaacgaccccgtctccaccaacttggtatgcttgaaatctcaaggccattacacattcagttatgtgaacgaaaggtctttatttaacgtagcataaactaaataatacaggttccggttagcctgcaatgtgttaaatctaaaggagcatacccaaaatgaactgaagacaaggaaatttgcttgtccagatgtgattgagcatttgaacgttaataacataacatttttatacttaactatagaaagacttgtataaaaactggcaaacgagatattctgaatattggtgcatatttcaggtagaaaagcttacaaaacaatctaatcataatattgagatgaagagaaagataaaagaaaaaacgataagtcagatgagattatgattgtactttgaaatcgaggaacaaagtatatacggtagtagttccccgagttataacgggagatcatgtaaattgagaaaccagataaagatttggtatgcactctagcaagaaaataaaatgatgaatctatgatatagatcacttttgttccagcgtcgaggaacgccaggttgcccactttctcactagtgacctgcagccgacgatcagatctttcaggaaagtttcggaggagatagtgttcggcagtttgtacatcatctgcgggatcaggtacggtttgatcaggttgtagaagatcaggtaagacatagaatcgatgtagatgatcggtttgtttttgttgatttttacgtaacagttcagttggaatttgttacgcagacccttaaccaggtattctacttcttcgaaagtgaaagactgggtgttcagtacgatcgatttgttggtagagtttttgttgtaatcccatttaccaccatcatccatgaaccagtatgccagagacatcggggtcaggtagttttcaaccaggttgttcgggatggtttttttgttgttaacgatgaacaggttagccagtttgttgaaagcttggtgtttgaaagtctgggcgccccaggtgattaccaggttacccaggtggttaacacgttcttttttgtgcggcggggacagtacccactgatcgtacagcagacatacgtggtccatgtatgctttgtttttccactcgaactgcatacagtaggttttaccttcatcacgagaacggatgtaagcatcacccaggatcagaccgatacctgcttcgaactgttcgatgttcagttcgatcagctgggatttgtattctttcagcagtttagagttcggacccaggttcattacctggttttttttgatgtttttcatatgcatggatccggggttttttctccttgacgttaaagtatagaggtatattaacaattttttgttgatacttttattacatttgaataagaagtaatacaaaccgaaaatgttgaaagtattagttaaagtggttatgcagtttttgcatttatatatctgttaatagatcaaaaatcatcgcttcgctgattaattaccccagaaataaggctaaaaaactaatcgcattatcatcctatggttgttaatttgattcgttcatttgaaggtttgtggggccaggttactgccaatttttcctcttcataaccataaaagctagtattgtagaatctttattgttcggagcagtgcggcgcgaggcacatctgcgtttcaggaacgcgaccggtgaagacgaggacgcacggaggagagtcttccttcggagggctgtcacccgctcggcggcttctaatccgtacttcaatatagcaatgagcagttaagcgtattactgaaagttccaaagagaaggtttttttaggctaagataatggggctctttacatttccacaacatataagtaagattagatatggatatgtatatggatatgtatatggtggtaatgccatgtaatatgattattaaacttctttgcgtccatccaacgagatctggcgcgccttaattaacccaacctgcattaatgaatcggccaacgcgcggattaccctgttatccctacatattgttgtgccatctgtgcagacaaacgcatcaggattcagtactgacaataaaaagattcttgttttcaagaacttgtcatttgtatagtttttttatattgtagttgttctattttaatcaaatgttagcgtgatttatattttttttcgcctcgacatcatctgcccagatgcgaagttaagtgcgcagaaagtaatatcatgcgtcaatcgtatgtgaatgctggtcgctatactgctgtcgattcgatactaacgccgccatccagtgtcgaaaacgagctcgaattcatcgatgatatcagatccactagtggcctatgcggccgcggatctgccggtctccctatagtgagtcgatccggatttacctgaatcaattggcgaaattttttgtacgaaatttcagccacttcacag'
    assert eq(correct,candidate, linear=True)

    ## text5
    list_of_formatted_seq_records = parse(text5)
    a=assembly.Assembly(list_of_formatted_seq_records, limit=60)
    candidate = a.circular_products[0]
    correct = 'tcgcgcgtttcggtgatgacggtgaaaacctctgacacatgcagctcccggagacggtcacagcttgtctgtaagcggatgccgggagcagacaagcccgtcagggcgcgtcagcgggtgttggcgggtgtcggggctggcttaactatgcggcatcagagcagattgtactgagagtgcaccatagatcctgaggatcggggtgataaatcagtctgcgccacatcgggggaaacaaaatggcgcgagatctaaaaaaaaaggctccaaaaggagcctttcgcgctaccaggtaacgcgccactccgacgggattaacgagtgccgtaaacgacgatggttttaccgtgtgcggagatcaggttctgatcctcgagcatcttaagaattcgtcccacggtttgtctagagcagccgacaatctggccaatttcctgacgggtaattttgatttgcatgccgtccgggtgagtcatagcgtctggttgttttgccagattcagcagagtctgtgcaatgcggccgctgaccacatacgatttaggtgacactatagaacgcggccgccagctgaagcttcgtacgctgcaggtcgacggatccccgggttaattaaggcgcgccagatctgtttagcttgccttgtccccgccgggtcacccggccagcgacatggaggcccagaataccctccttgacagtcttgacgtgcgcagctcaggggcatgatgtgactgtcgcccgtacatttagcccatacatccccatgtataatcatttgcatccatacattttgatggccgcacggcgcgaagcaaaaattacggctcctcgctgcagacctgcgagcagggaaacgctcccctcacagacgcgttgaattgtccccacgccgcgcccctgtagagaaatataaaaggttaggatttgccactgaggttcttctttcatatacttccttttaaaatcttgctaggatacagttctcacatcacatccgaacataaacaaccgtcgaggaacgccaggttgcccactttctcactagtgacctgcagccgacccaatcacatcacatccgaacataaacaaccatgggtaaaaagcctgaactcaccgcgacgtctgtcgagaagtttctgatcgaaaagttcgacagcgtctccgacctgatgcagctctcggagggcgaagaatctcgtgctttcagcttcgatgtaggagggcgtggatatgtcctgcgggtaaatagctgcgccgatggtttctacaaagatcgttatgtttatcggcactttgcatcggccgcgctcccgattccggaagtgcttgacattggggaattcagcgagagcctgacctattgcatctcccgccgtgcacagggtgtcacgttgcaagacctgcctgaaaccgaactgcccgctgttctgcagccggtcgcggaggccatggatgcgatcgctgcggccgatcttagccagacgagcgggttcggcccattcggaccgcaaggaatcggtcaatacactacatggcgtgatttcatatgcgcgattgctgatccccatgtgtatcactggcaaactgtgatggacgacaccgtcagtgcgtccgtcgcgcaggctctcgatgagctgatgctttgggccgaggactgccccgaagtccggcacctcgtgcacgcggatttcggctccaacaatgtcctgacggacaatggccgcataacagcggtcattgactggagcgaggcgatgttcggggattcccaatacgaggtcgccaacatcttcttctggaggccgtggttggcttgtatggagcagcagacgcgctacttcgagcggaggcatccggagcttgcaggatcgccgcggctccgggcgtatatgctccgcattggtcttgaccaactctatcagagcttggttgacggcaatttcgatgatgcagcttgggcgcagggtcgatgcgacgcaatcgtccgatccggagccgggactgtcgggcgtacacaaatcgcccgcagaagcgcggccgtctggaccgatggctgtgtagaagtactcgccgatagtggaaaccgacgccccagcactcgtccgagggcaaaggaataatcagtactgacaataaaaagattcttgtagggataacagggtaatcggagtgccatctgtgcagacaaacgcatcaggatagagtcttttgtaacgaccccgtctccaccaacttggtatgcttgaaatctcaaggccattacacattcagttatgtgaacgaaaggtctttatttaacgtagcataaactaaataatacaggttccggttagcctgcaatgtgttaaatctaaaggagcatacccaaaatgaactgaagacaaggaaatttgcttgtccagatgtgattgagcatttgaacgttaataacataacatttttatacttaactatagaaagacttgtataaaaactggcaaacgagatattctgaatattggtgcatatttcaggtagaaaagcttacaaaacaatctaatcataatattgagatgaagagaaagataaaagaaaaaacgataagtcagatgagattatgattgtactttgaaatcgaggaacaaagtatatacggtagtagttccccgagttataacgggagatcatgtaaattgagaaaccagataaagatttggtatgcactctagcaagaaaataaaatgatgaatctatgatatagatcacttttgttccagcgtcgaggaacgccaggttgcccactttctcactagtgacctgcagccgacgatcagatctttcaggaaagtttcggaggagatagtgttcggcagtttgtacatcatctgcgggatcaggtacggtttgatcaggttgtagaagatcaggtaagacatagaatcgatgtagatgatcggtttgtttttgttgatttttacgtaacagttcagttggaatttgttacgcagacccttaaccaggtattctacttcttcgaaagtgaaagactgggtgttcagtacgatcgatttgttggtagagtttttgttgtaatcccatttaccaccatcatccatgaaccagtatgccagagacatcggggtcaggtagttttcaaccaggttgttcgggatggtttttttgttgttaacgatgaacaggttagccagtttgttgaaagcttggtgtttgaaagtctgggcgccccaggtgattaccaggttacccaggtggttaacacgttcttttttgtgcggcggggacagtacccactgatcgtacagcagacatacgtggtccatgtatgctttgtttttccactcgaactgcatacagtaggttttaccttcatcacgagaacggatgtaagcatcacccaggatcagaccgatacctgcttcgaactgttcgatgttcagttcgatcagctgggatttgtattctttcagcagtttagagttcggacccaggttcattacctggttttttttgatgtttttcatatgcatggatccggggttttttctccttgacgttaaagtatagaggtatattaacaattttttgttgatacttttattacatttgaataagaagtaatacaaaccgaaaatgttgaaagtattagttaaagtggttatgcagtttttgcatttatatatctgttaatagatcaaaaatcatcgcttcgctgattaattaccccagaaataaggctaaaaaactaatcgcattatcatcctatggttgttaatttgattcgttcatttgaaggtttgtggggccaggttactgccaatttttcctcttcataaccataaaagctagtattgtagaatctttattgttcggagcagtgcggcgcgaggcacatctgcgtttcaggaacgcgaccggtgaagacgaggacgcacggaggagagtcttccttcggagggctgtcacccgctcggcggcttctaatccgtacttcaatatagcaatgagcagttaagcgtattactgaaagttccaaagagaaggtttttttaggctaagataatggggctctttacatttccacaacatataagtaagattagatatggatatgtatatggatatgtatatggtggtaatgccatgtaatatgattattaaacttctttgcgtccatccaacgagatctggcgcgccttaattaacccaacctgcattaatgaatcggccaacgcgcggattaccctgttatccctacatattgttgtgccatctgtgcagacaaacgcatcaggattcagtactgacaataaaaagattcttgttttcaagaacttgtcatttgtatagtttttttatattgtagttgttctattttaatcaaatgttagcgtgatttatattttttttcgcctcgacatcatctgcccagatgcgaagttaagtgcgcagaaagtaatatcatgcgtcaatcgtatgtgaatgctggtcgctatactgctgtcgattcgatactaacgccgccatccagtgtcgaaaacgagctcgaattcatcgatgatatcagatccactagtggcctatgcggccgcggatctgccggtctccctatagtgagtcgatccggatttacctgaatcaattggcgaaattttttgtacgaaatttcagccacttcacaggcggttttcgcacgtacccatgcgctacgttcctggccctcttcaaacaggcccagttcgccaataaaatcaccctgattcagataggagaggatcatttctttaccctcttcgtctttgatcagcactgccacagagcctttaacgatgtagtacagcgtttccgctttttcaccctggtgaataagcgtgctcttggatgggtacttatgaatgtggcaatgagacaagaaccattcgagagtaggatccgtttgaggtttaccaagtaccataagatccttaaatttttattatctagctagatgataatattatatcaagaattgtacctgaaagcaaataaattttttatctggcttaactatgcggcatcagagcagattgtactgagagtgcaccatatgcggtgtgaaataccgcacagatgcgtaaggagaaaataccgcatcaggcgctcttccgcttcctcgctcactgactcgctgcgctcggtcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacggttatccacagaatcaggggataacgcaggaaagaacatgtgagcaaaaggccagcaaaagcccaggaaccgtaaaaaggccgcgttgctggcgtttttccataggctccgcccccctgacgagcatcacaaaaatcgacgctcaagtcagaggtggcgaaacccgacaggactataaagataccaggcgtttccccctggaagctccctcgtgcgctctcctgttccgaccctgccgcttaccggatacctgtccgcctttctcccttcgggaagcgtggcgctttctcatagctcacgctgtaggtatctcagttcggtgtaggtcgttcgctccaagctgggctgtgtgcacgaaccccccgttcagcccgaccgctgcgccttatccggtaactatcgtcttgagtccaacccggtaagacacgacttatcgccactggcagcagccactggtaacaggattagcagagcgaggtatgtaggcggtgctacagagttcttgaagtggtggcctaactacggctacactagaaggacagtatttggtatctgcgctctgctgaagccagttaccttcggaaaaagagttggtagctcttgatccggcaaacaaaccaccgctggtagcggtggtttttttgtttgcaagcagcagattacgcgcagaaaaaaaggatctcaagaagatcctttgatcttttctacggggtctgacgctcagtggaacgaaaactcacgttaagggattttggtcatgaggggtaataactgatataattaaattgaagctctaatttgtgagtttagtatacatgcatttacttataatacagttttttagttttgctggccgcatcttctcaaatatgcttcccagcctgcttttctgtaacgttcaccctctaccttagcatcccttccctttgcaaatagtcctcttccaacaataataatgtcagatcctgtagagaccacatcatccacggttctatactgttgacccaatgcgtctcccttgtcatctaaacccacaccgggtgtcataatcaaccaatcgtaaccttcatctcttccacccatgtctctttgagcaataaagccgataacaaaatctttgtcgctcttcgcaatgtcaacagtacccttagtatattctccagtagatagggagcccttgcatgacaattctgctaacatcaaaaggcctctaggttcctttgttacttcttctgccgcctgcttcaaaccgctaacaatacctgggcccaccacaccgtgtgcattcgtaatgtctgcccattctgctattctgtatacacccgcagagtactgcaatttgactgtattaccaatgtcagcaaattttctgtcttcgaagagtaaaaaattgtacttggcggataatgcctttagcggcttaactgtgccctccatggaaaaatcagtcaaaatatccacatgtgtttttagtaaacaaattttgggacctaatgcttcaactaactccagtaattccttggtggtacgaacatccaatgaagcacacaagtttgtttgcttttcgtgcatgatattaaatagcttggcagcaacaggactaggatgagtagcagcacgttccttatatgtagctttcgacatgatttatcttcgtttcctgcaggtttttgttctgtgcagttgggttaagaatactgggcaatttcatgtttcttcaacactacatatgcgtatatataccaatctaagtctgtgctccttccttcgttcttccttctgttcggagattaccgaatcaaaaaaatttcaaagaaaccgaaatcaaaaaaaagaataaaaaaaaaatgatgaattgaattgaaaagctagcttatcgatgataagctgtcaaagatgagaattaattccacggactatagactatactagatactccgtctactgtacgatacacttccgctcaggtccttgtcctttaacgaggccttaccactcttttgttactctattgatccagctcagcaaaggcagtgtgatctaagattctatcttcgcgatgtagtaaaactagctagaccgagaaagagactagaaatgcaaaaggcacttctacaatggctgccatcattattatccgatgtgacgctgcagcttctcaatgatattcgaatacgctttgaggagatacagcctaatatccgacaaactgttttacagatttacgatcgtacttgttacccatcattgaattttgaacatccgaacctgggagttttccctgaaacagatagtatatttgaacctgtataataatatatagtctagcgctttacggaagacaatgtatgtatttcggttcctggagaaactattgcatctattgcataggtaatcttgcacgtcgcatccccggttcattttctgcgtttccatcttgcacttcaatagcatatctttgttaacgaagcatctgtgcttcattttgtagaacaaaaatgcaacgcgagagcgctaatttttcaaacaaagaatctgagctgcatttttacagaacagaaatgcaacgcgaaagcgctattttaccaacgaagaatctgtgcttcatttttgtaaaacaaaaatgcaacgcgacgagagcgctaatttttcaaacaaagaatctgagctgcatttttacagaacagaaatgcaacgcgagagcgctattttaccaacaaagaatctatacttcttttttgttctacaaaaatgcatcccgagagcgctatttttctaacaaagcatcttagattactttttttctcctttgtgcgctctataatgcagtctcttgataactttttgcactgtaggtccgttaaggttagaagaaggctactttggtgtctattttctcttccataaaaaaagcctgactccacttcccgcgtttactgattactagcgaagctgcgggtgcattttttcaagataaaggcatccccgattatattctataccgatgtggattgcgcatactttgtgaacagaaagtgatagcgttgatgattcttcattggtcagaaaattatgaacggtttcttctattttgtctctatatactacgtataggaaatgtttacattttcgtattgttttcgattcactctatgaatagttcttactacaatttttttgtctaaagagtaatactagagataaacataaaaaatgtagaggtcgagtttagatgcaagttcaaggagcgaaaggtggatgggtaggttatatagggatatagcacagagatatatagcaaagagatacttttgagcaatgtttgtggaagcggtattcgcaatgggaagctccaccccggttgataatcagaaaagccccaaaaacaggaagattattatcaaaaaggatcttcacctagatccttttaaattaaaaatgaagttttaaatcaatctaaagtatatatgagtaaacttggtctgacagttaccaatgcttaatcagtgaggcacctatctcagcgatctgtctatttcgttcatccatagttgcctgactccccgtcgtgtagataactacgatacgggagcgcttaccatctggccccagtgctgcaatgataccgcgagacccacgctcaccggctccagatttatcagcaataaaccagccagccggaagggccgagcgcagaagtggtcctgcaactttatccgcctccatccagtctattaattgttgccgggaagctagagtaagtagttcgccagttaatagtttgcgcaacgttgttggcattgctacaggcatcgtggtgtcactctcgtcgtttggtatggcttcattcagctccggttcccaacgatcaaggcgagttacatgatcccccatgttgtgcaaaaaagcggttagctccttcggtcctccgatcgttgtcagaagtaagttggccgcagtgttatcactcatggttatggcagcactgcataattctcttactgtcatgccatccgtaagatgcttttctgtgactggtgagtactcaaccaagtcattctgagaatagtgtatgcggcgaccgagttgctcttgcccggcgtcaatacgggataatagtgtatcacatagcagaactttaaaagtgctcatcattggaaaacgttcttcggggcgaaaactctcaaggatcttaccgctgttgagatccagttcgatgtaacccactcgtgcacccaactgatcttcagcatcttttactttcaccagcgtttctgggtgagcaaaaacaggaaggcaaaatgccgcaaaaaagggaataagggcgacacggaaatgttgaatactcatactcttcctttttcaatattattgaagcatttatcagggttattgtctcatgagcggatacatatttgaatgtatttagaaaaataaacaaataggggttccgcgcacatttccccgaaaagtgccacctgctaagaaaccattattatcatgacattaacctataaaaataggcgtatcacgaggccctttcgtc'
    assert len(correct)==9772
    assert eq(correct,candidate, circular=True)
    
    ## text6
    
    y,x = parse(text6)
    a=assembly.Assembly((x,y,x), limit=40)
    candidate = a.linear[0]
    correct = 'aaattgacctcgtttgattgctctcaggtttccaacaacttgtttgttaccggtttcagtacgggtattatcaagttatgggatgccagagcggctgaagctgccaccactgatttgacttatagacaaaacggtgaagatccaattcagaatgaaatcgctaacttctatcatgccggcggtgattctgttgtcgacgtccaattttctgccacttcaagctctgaattctttactgtgggcggcactggtaatatttaccactggaacactgactattccttgtcaaagtacaatcctgacgataccattgctcctcctcaagatgccactgaagaatcacaaacaaaatctctgagattcttgcacaagggtggaagcagaagatctccaaaacagattggaagaagaaacaccgccgcttggcatccagttattgaaaacttggttggtactgtcgatgacgatagtttagtcagcatctacaagccctataccgaggaaagcgaatagtcgccatgctaaacgcgcggaacaaggccatatttatatatttaatgcttttaactattattagtttttctcacccagggctggtttctttaccctgtgtgatgaaagtgcgcgcctaaagttatgtatgagctactgttagtatatttattattcaatatttaattaaacaatacttactactgatgaaagataccgtacacctgctggcgaataagtcactatacacgagcaattatatttctcaggtcattgcgacaattgaaaaatcggatcgactgattatcattaaggcgtgtgacggctcagaataaggaagttctattttaaagggcagcaaaaatttggcacaatttaaaaagaaagttggtctctggtagggttggatccggtttttcataacttgcgtttcatttatggttgcgtatttctcgcagtgtacatagaccaaattaactctatccttccattgcacaatttgcccagtatggatgtccacgaggtctctgctatggacacatttacgcccgtacgctgcaggtcgacggatccccgggttaattaaggcgcgccagatctgtttagcttgcctcgtccccgccgggtcacccggccagcgacatggaggcccagaataccctccttgacagtcttgacgtgcgcagctcaggggcatgatgtgactgtcgcccgtacatttagcccatacatccccatgtataatcatttgcatccatacattttgatggccgcacggcgcgaagcaaaaattacggctcctcgctgcagacctgcgagcagggaaacgctcccctcacagacgcgttgaattgtccccacgccgcgcccctgtagagaaatataaaaggttaggatttgccactgaggttcttctttcatatacttccttttaaaatcttgctaggatacagttctcacatcacatccgaacataaacaaccatgggtaaggaaaagactcacgtttcgaggccgcgattaaattccaacatggatgctgatttatatgggtataaatgggctcgcgataatgtcgggcaatcaggtgcgacaatctatcgattgtatgggaagcccgatgcgccagagttgtttctgaaacatggcaaaggtagcgttgccaatgatgttacagatgagatggtcagactaaactggctgacggaatttatgcctcttccgaccatcaagcattttatccgtactcctgatgatgcatggttactcaccactgcgatccccggcaaaacagcattccaggtattagaagaatatcctgattcaggtgaaaatattgttgatgcgctggcagtgttcctgcgccggttgcattcgattcctgtttgtaattgtccttttaacagcgatcgcgtatttcgtctcgctcaggcgcaatcacgaatgaataacggtttggttgatgcgagtgattttgatgacgagcgtaatggctggcctgttgaacaagtctggaaagaaatgcataagcttttgccattctcaccggattcagtcgtcactcatggtgatttctcacttgataaccttatttttgacgaggggaaattaataggttgtattgatgttggacgagtcggaatcgcagaccgataccaggatcttgccatcctatggaactgcctcggtgagttttctccttcattacagaaacggctttttcaaaaatatggtattgataatcctgatatgaataaattgcagtttcatttgatgctcgatgagtttttctaatcagtactgacaataaaaagattcttgttttcaagaacttgtcatttgtatagtttttttatattgtagttgttctattttaatcaaatgttagcgtgatttatattttttttcgcctcgacatcatctgcccagatgcgaagttaagtgcgcagaaagtaatatcatgcgtcaatcgtatgtgaatgctggtcgctatactgctgtcgattcgatactaacgccgccatccagtgtcgaaaacgagctcgaattcatcgatgaatgacgttatagacgagcctacgagaccgacaccgtaatcaataagcaattttttgcgaacatgattaagtttattttactttatttcgcattttccataaaaaaattttcctccatacaagattcatacccaggatagcctaactaaaatgtatggctttatacagcttgacgacaaacttaatttgaatatatagatatattaatttaatcagcaggattagcatttaatgtcttacatgtctttgtatttggcatacgtattcagtgatattttaatacctcgcaacgcaatttccagcgagtttacgtttgaagcaaacgtaactcccatgagttatacataacgcctgctgcagctgaaccagaacaatataccgtggtattaccgtaagcatttgaaaacaataataagtttccaagtgccgctttagatccaaagtacaaggacatattgtggaagagtaagttgaatatttgaaaatgagagctttttcagcagccaccgttagggccacaactaggaagtcgttcatcccaatggcaccaagaactccttttgtgactccatcatttacaaagaatgtaggctcaatgagaagaatgagattttattctgatgaagccaaaagtgaagaatccaaagaaaacaatgaagatttgactgaagagcaatcagaaatcaagaaattagagagccagttaagcgcgaagactaaagaagcttctgaactcaaggacagattattaagatctgtggcagatttcagaaatttacaacaagtcacaaagaaggatattcagaaagctaaggactttgctttacagaagtttgcaaaggatttattggaatctgtagataactttggtcatgctttgaatgcttttaaagaggaagacttacaaaagtccaaggaaattagtgatttgtatacaggggttagaatgacaagagatgtttttgaaaacaccctaagaaagcacggtattgaaaaattagacccattgggagaaccatttgatccaaataaacacgaa'
    assert len(correct)==3587
    assert eq(correct,candidate, linear=True) 
    
    

    ## text7 cSEGUID G2drVQAIaRfFXBfqEc5Kddac36A
    list_of_formatted_seq_records = parse(text7)
    a=assembly.Assembly(list_of_formatted_seq_records, limit=28)

    candidate = a.circular_products[0]
    correct = 'aattggccagattgtcggctgctctagacaaaccgtgggacgaattcttaagatgctcgaggatcagaacctgatctccgcacacggtaaaaccatcgtcgtttacggcactcgttaatcccgtcggagtggcgcgttacctggtagcgcgaaaggctccttttggagcctttttttttagatctcgcgccattttgtttcccccgatgtggcgcagactgatttatcaccccgatcctcaggatctatggtgcactctcagtacaatctgctctgatgccgcatagttaagccagccccgacacccgccaacacccgctgacgcgccctgacgggcttgtctgctcccggcatccgcttacagacaagctgtgaccgtctccgggagctgcatgtgtcagaggttttcaccgtcatcaccgaaacgcgcgagacgaaagggcctcgtgatacgcctatttttataggttaatgtcatgataataatggtttcttagcaggtggcacttttcggggaaatgtgcgcggaacccctatttgtttatttttctaaatacattcaaatatgtatccgctcatgagacaataaccctgataaatgcttcaataatattgaaaaaggaagagtatgagtattcaacatttccgtgtcgcccttattcccttttttgcggcattttgccttcctgtttttgctcacccagaaacgctggtgaaagtaaaagatgctgaagatcagttgggtgcacgagtgggttacatcgaactggatctcaacagcggtaagatccttgagagttttcgccccgaagaacgttttccaatgatgagcacttttaaagttctgctatgtgatacactattatcccgtattgacgccgggcaagagcaactcggtcgccgcatacactattctcagaatgacttggttgagtactcaccagtcacagaaaagcatcttacggatggcatgacagtaagagaattatgcagtgctgccataaccatgagtgataacactgcggccaacttacttctgacaacgatcggaggaccgaaggagctaaccgcttttttgcacaacatgggggatcatgtaactcgccttgatcgttgggaaccggagctgaatgaagccataccaaacgacgagagtgacaccacgatgcctgtagcaatgccaacaacgttgcgcaaactattaactggcgaactacttactctagcttcccggcaacaattaatagactggatggaggcggataaagttgcaggaccacttctgcgctcggcccttccggctggctggtttattgctgataaatctggagccggtgagcgtgggtctcgcggtatcattgcagcactggggccagatggtaagcgctcccgtatcgtagttatctacacgacggggagtcaggcaactatggatgaacgaaatagacagatcgctgagataggtgcctcactgattaagcattggtaactgtcagaccaagtttactcatatatactttagattgatttaaaacttcatttttaatttaaaaggatctaggtgaagatcctttttgataataatcttcctgtttttggggcttttctgattatcaaccggggtggagcttcccattgcgaataccgcttccacaaacattgctcaaaagtatctctttgctatatatctctgtgctatatccctatataacctacccatccacctttcgctccttgaacttgcatctaaactcgacctctacattttttatgtttatctctagtattactctttagacaaaaaaattgtagtaagaactattcatagagtgaatcgaaaacaatacgaaaatgtaaacatttcctatacgtagtatatagagacaaaatagaagaaaccgttcataattttctgaccaatgaagaatcatcaacgctatcactttctgttcacaaagtatgcgcaatccacatcggtatagaatataatcggggatgcctttatcttgaaaaaatgcacccgcagcttcgctagtaatcagtaaacgcgggaagtggagtcaggctttttttatggaagagaaaatagacaccaaagtagccttcttctaaccttaacggacctacagtgcaaaaagttatcaagagactgcattatagagcgcacaaaggagaaaaaaagtaatctaagatgctttgttagaaaaatagcgctctcgggatgcatttttgtagaacaaaaaagaagtatagattctttgttggtaaaatagcgctctcgcgttgcatttctgttctgtaaaaatgcagctcagattctttgtttgaaaaattagcgctctcgtcgcgttgcatttttgttttacaaaaatgaagcacagattcttcgttggtaaaatagcgctttcgcgttgcatttctgttctgtaaaaatgcagctcagattctttgtttgaaaaattagcgctctcgcgttgcatttttgttctacaaaatgaagcacagatgcttcgttaacaaagatatgctattgaagtgcaagatggaaacgcagaaaatgaaccggggatgcgacgtgcaagattacctatgcaatagatgcaatagtttctccaggaaccgaaatacatacattgtcttccgtaaagcgctagactatatattattatacaggttcaaatatactatctgtttcagggaaaactcccaggttcggatgttcaaaattcaatgatgggtaacaagtacgatcgtaaatctgtaaaacagtttgtcggatattaggctgtatctcctcaaagcgtattcgaatatcattgagaagctgcagcgtcacatcggataataatgatggcagccattgtagaagtgccttttgcatttctagtctctttctcggtctagctagttttactacatcgcgaagatagaatcttagatcacactgcctttgctgagctggatcaatagagtaacaaaagagtggtaaggcctcgttaaaggacaaggacctgagcggaagtgtatcgtacagtagacggagtatctagtatagtctatagtccgtggaattaattctcatctttgacagcttatcatcgataagctagcttttcaattcaattcatcattttttttttattcttttttttgatttcggtttctttgaaatttttttgattcggtaatctccgaacagaaggaagaacgaaggaaggagcacagacttagattggtatatatacgcatatgtagtgttgaagaaacatgaaattgcccagtattcttaacccaactgcacagaacaaaaacctgcaggaaacgaagataaatcatgtcgaaagctacatataaggaacgtgctgctactcatcctagtcctgttgctgccaagctatttaatatcatgcacgaaaagcaaacaaacttgtgtgcttcattggatgttcgtaccaccaaggaattactggagttagttgaagcattaggtcccaaaatttgtttactaaaaacacatgtggatattttgactgatttttccatggagggcacagttaagccgctaaaggcattatccgccaagtacaattttttactcttcgaagacagaaaatttgctgacattggtaatacagtcaaattgcagtactctgcgggtgtatacagaatagcagaatgggcagacattacgaatgcacacggtgtggtgggcccaggtattgttagcggtttgaagcaggcggcagaagaagtaacaaaggaacctagaggccttttgatgttagcagaattgtcatgcaagggctccctatctactggagaatatactaagggtactgttgacattgcgaagagcgacaaagattttgttatcggctttattgctcaaagagacatgggtggaagagatgaaggttacgattggttgattatgacacccggtgtgggtttagatgacaagggagacgcattgggtcaacagtatagaaccgtggatgatgtggtctctacaggatctgacattattattgttggaagaggactatttgcaaagggaagggatgctaaggtagagggtgaacgttacagaaaagcaggctgggaagcatatttgagaagatgcggccagcaaaactaaaaaactgtattataagtaaatgcatgtatactaaactcacaaattagagcttcaatttaattatatcagttattacccctcatgaccaaaatcccttaacgtgagttttcgttccactgagcgtcagaccccgtagaaaagatcaaaggatcttcttgagatcctttttttctgcgcgtaatctgctgcttgcaaacaaaaaaaccaccgctaccagcggtggtttgtttgccggatcaagagctaccaactctttttccgaaggtaactggcttcagcagagcgcagataccaaatactgtccttctagtgtagccgtagttaggccaccacttcaagaactctgtagcaccgcctacatacctcgctctgctaatcctgttaccagtggctgctgccagtggcgataagtcgtgtcttaccgggttggactcaagacgatagttaccggataaggcgcagcggtcgggctgaacggggggttcgtgcacacagcccagcttggagcgaacgacctacaccgaactgagatacctacagcgtgagctatgagaaagcgccacgcttcccgaagggagaaaggcggacaggtatccggtaagcggcagggtcggaacaggagagcgcacgagggagcttccagggggaaacgcctggtatctttatagtcctgtcgggtttcgccacctctgacttgagcgtcgatttttgtgatgctcgtcaggggggcggagcctatggaaaaacgccagcaacgcggcctttttacggttcctggccttttgctggccttttgctcacatgttctttcctgcgttatcccctgattctgtggataaccgtattaccgcctttgagtgagctgataccgctcgccgcagccgaacgaccgagcgcagcgagtcagtgagcgaggaagcggaagagcgcctgatgcggtattttctccttacgcatctgtgcggtatttcacaccgcatatggtgcactctcagtacaatctgctctgatgccgcatagttaagccagataaaaaatttatttgctttcaggtacaattcttgatataatattatcatctagctagataataaaaatttaaggatcttatggtacttggtaaacctcaaacggatcctactctcgaatggttcttgtctcattgccacattcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctgtactacatcgttaaaggctctgtggcagtgctgatcaaagacgaagagggtaaagaaatgatcctctcctatctgaatcagggtgattttattggcgaactgggcctgtttgaagagggccaggaacgtagcgcatgggtacgtgcgaaaaccgcctgtgaagtggctgaaatttcgtacaaaaaatttcgccaattgattcaggtaaatccggatgctggaacaaaagtgatctatatcatagattcatcattttattttcttgctagagtgcataccaaatctttatctggtttctcaatttacatgatctcccgttataactcggggaactactaccgtatatactttgttcctcgatttcaaagtacaatcataatctcatctgacttatcgttttttcttttatctttctcttcatctcaatattatgattagattgttttgtaagcttttctacctgaaatatgcaccaatattcagaatatctcgtttgccagtttttatacaagtctttctatagttaagtataaaaatgttatgttattaacgttcaaatgctcaatcacatctggacaagcaaatttccttgtcttcagttcattttgggtatgctcctttagatttaacacattgcaggctaaccggaacctgtattatttagtttatgctacgttaaataaagacctttcgttcacataactgaatgtgtaatggccttgagatttcaagcataccaagttggtggagacggggtcgttacaaaagactctatcctgatgcgtttgtctgcacagatggcgcgtccgattaccctgttatccctacaagaatctttttattgtcagtactgattattcctttgccctcggacgagtgctggggcgtcggtttccactatcggcgagtacttctacacagccatcggtccagacggccgcgcttctgcgggcgatttgtgtacgcccgacagtcccggctccggatcggacgattgcgtcgcatcgaccctgcgcccaagctgcatcatcgaaattgccgtcaaccaagctctgatagagttggtcaagaccaatgcggagcatatacgcccggagccgcggcgatcctgcaagctccggatgcctccgctcgaagtagcgcgtctgctgctccatacaagccaaccacggcctccagaagaagatgttggcgacctcgtattgggaatccccgaacatcgcctcgctccagtcaatgaccgctgttatgcggccattgtccgtcaggacattgttggagccgaaatccgcgtgcacgaggtgccggacttcggggcagtcctcggcccaaagcatcagctcatcgagagcctgcgcgacggacgcactgacggtgtcgtccatcacagtttgccagtgatacacatggggatcagcaatcgcgcatatgaaatcacgccatgtagtgtattgaccgattccttgcggtccgaatgggccgaacccgctcgtctggctaagatcggccgcagcgatcgcatccatggcctccgcgaccggctgcagaacagcgggcagttcggtttcaggcaggtcttgcaacgtgacaccctgtgcacggcgggagatgcaataggtcaggctctcgctgaattccccaatgtcaagcacttccggaatcgggagcgcggccgatgcaaagtgccgataaacataacgatctttgtagaaaccatcggcgcagctatttacccgcaggacatatccacgccctcctacatcgaagctgaaagcacgagattcttcgccctccgagagctgcatcaggtcggagacgctgtcgaacttttcgatcagaaacttctcgacagacgtcgcggtgagttcaggctttttacccatggttgtttatgttcggatgtgatgtgattggccggctgcaggtcactagtgagaaagtgggcaacctggcgttcctcgacatctaggtgaagatcctttttgataatctcatgaccaaaatcccttaacgtgagttttcgttccactgagcgtcagaccccgtagaaaagatcaaaggatcttcttgagatcctttttttctgcgcgtaatctgctgcttgcaaacaaaaaaaccaccgctaccagcggtggtttgtttgccggatcaagagctaccaactctttttccgaaggtaactggcttcagcagagcgcagataccaaatactgtccttctagtgtagccgtagttaggccaccacttcaagaactctgtagcaccgcctacatacctcgctctgctaatcctgttaccagtggctgctgccagtggcgataagtcgtgtcttaccgggttggactcaagacgatagttaccggataaggcgcagcggtcgggctgaacggggggttcgtgcacacagcccagcttggagcgaacgacctacaccgaactgagatacgtcagcggccgcattgcacagactctgctgaatctggcaaaacaaccagacgctatgactcacccggacggcatgcaaatcaaaattacccgtcagga'
    assert len(correct)==7911
    assert eq(correct,candidate, circular=True)

    assert repr(candidate) == "Contig(o7911)"

    

    h = ''' -|5681|61
|       \\/
|       /\\
|       61|650_rc|32
|                 \\/
|                 /\\
|                 32|1196_rc|49
|                            \\/
|                            /\\
|                            49|630_rc|98
|                                      \\/
|                                      /\\
|                                      98-
|                                         |
 -----------------------------------------'''

    h = ''' -|630|49
|      \\/
|      /\\
|      49|1196|32
|              \\/
|              /\\
|              32|650|61
|                     \\/
|                     /\\
|                     61|5681_rc|98
|                                \\/
|                                /\\
|                                98-
|                                   |
 -----------------------------------'''


    assert h == candidate.small_figure()
    
    

    assert candidate.detailed_figure() == ("||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||\n"
                                           "tcctgacgggtaattttgatttgcatgccgtccgggtgagtcatagcgtctggttgttttgccagattcagcagagtctgtgcaatgcggccgctgacgtatctcagttcggtgtaggtcgttcgctccaagctgggctgtgtgcacgaaccccccgttcagcccgaccgctgcgccttatccggtaactatcgtcttgagtccaacccggtaagacacgacttatcgccactggcagcagccactggtaacaggattagcagagcgaggtatgtaggcggtgctacagagttcttgaagtggtggcctaactacggctacactagaaggacagtatttggtatctgcgctctgctgaagccagttaccttcggaaaaagagttggtagctcttgatccggcaaacaaaccaccgctggtagcggtggtttttttgtttgcaagcagcagattacgcgcagaaaaaaaggatctcaagaagatcctttgatcttttctacggggtctgacgctcagtggaacgaaaactcacgttaagggattttggtcatgagattatcaaaaaggatcttcacctagatgtcgaggaacgccaggttgcccactttctcactagtgacctgcagccgg\n"
                                           "                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GTCGAGGAACGCCAGGTTGCCCACTTTCTCACTAGTGACCTGCAGCCGG\n"
                                           "                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     gtcgaggaacgccaggttgcccactttctcactagtgacctgcagccggccaatcacatcacatccgaacataaacaaccatgggtaaaaagcctgaactcaccgcgacgtctgtcgagaagtttctgatcgaaaagttcgacagcgtctccgacctgatgcagctctcggagggcgaagaatctcgtgctttcagcttcgatgtaggagggcgtggatatgtcctgcgggtaaatagctgcgccgatggtttctacaaagatcgttatgtttatcggcactttgcatcggccgcgctcccgattccggaagtgcttgacattggggaattcagcgagagcctgacctattgcatctcccgccgtgcacagggtgtcacgttgcaagacctgcctgaaaccgaactgcccgctgttctgcagccggtcgcggaggccatggatgcgatcgctgcggccgatcttagccagacgagcgggttcggcccattcggaccgcaaggaatcggtcaatacactacatggcgtgatttcatatgcgcgattgctgatccccatgtgtatcactggcaaactgtgatggacgacaccgtcagtgcgtccgtcgcgcaggctctcgatgagctgatgctttgggccgaggactgccccgaagtccggcacctcgtgcacgcggatttcggctccaacaatgtcctgacggacaatggccgcataacagcggtcattgactggagcgaggcgatgttcggggattcccaatacgaggtcgccaacatcttcttctggaggccgtggttggcttgtatggagcagcagacgcgctacttcgagcggaggcatccggagcttgcaggatcgccgcggctccgggcgtatatgctccgcattggtcttgaccaactctatcagagcttggttgacggcaatttcgatgatgcagcttgggcgcagggtcgatgcgacgcaatcgtccgatccggagccgggactgtcgggcgtacacaaatcgcccgcagaagcgcggccgtctggaccgatggctgtgtagaagtactcgccgatagtggaaaccgacgccccagcactcgtccgagggcaaaggaataatcagtactgacaataaaaagattcttgtagggataacagggtaatcggacgcgccatctgtgcagacaaacgcatcaggatttaaat\n"
                                           "                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CGCGCCATCTGTGCAGACAAACGCATCAGGAT\n"
                                           "                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           cgcgccatctgtgcagacaaacgcatcaggatagagtcttttgtaacgaccccgtctccaccaacttggtatgcttgaaatctcaaggccattacacattcagttatgtgaacgaaaggtctttatttaacgtagcataaactaaataatacaggttccggttagcctgcaatgtgttaaatctaaaggagcatacccaaaatgaactgaagacaaggaaatttgcttgtccagatgtgattgagcatttgaacgttaataacataacatttttatacttaactatagaaagacttgtataaaaactggcaaacgagatattctgaatattggtgcatatttcaggtagaaaagcttacaaaacaatctaatcataatattgagatgaagagaaagataaaagaaaaaacgataagtcagatgagattatgattgtactttgaaatcgaggaacaaagtatatacggtagtagttccccgagttataacgggagatcatgtaaattgagaaaccagataaagatttggtatgcactctagcaagaaaataaaatgatgaatctatgatatagatcacttttgttccagcatccggatttacctgaatcaattggcgaaattttttgtacgaaatttcagccacttcacag\n"
                                           "                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ATCCGGATTTACCTGAATCAATTGGCGAAATTTTTTGTACGAAATTTCAGCCACTTCACAG\n"
                                           "                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        atccggatttacctgaatcaattggcgaaattttttgtacgaaatttcagccacttcacaggcggttttcgcacgtacccatgcgctacgttcctggccctcttcaaacaggcccagttcgccaataaaatcaccctgattcagataggagaggatcatttctttaccctcttcgtctttgatcagcactgccacagagcctttaacgatgtagtacagcgtttccgctttttcaccctggtgaataagcgtgctcttggatgggtacttatgaatgtggcaatgagacaagaaccattcgagagtaggatccgtttgaggtttaccaagtaccataagatccttaaatttttattatctagctagatgataatattatatcaagaattgtacctgaaagcaaataaattttttatctggcttaactatgcggcatcagagcagattgtactgagagtgcaccatatgcggtgtgaaataccgcacagatgcgtaaggagaaaataccgcatcaggcgctcttccgcttcctcgctcactgactcgctgcgctcggtcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacggttatccacagaatcaggggataacgcaggaaagaacatgtgagcaaaaggccagcaaaaggccaggaaccgtaaaaaggccgcgttgctggcgtttttccataggctccgcccccctgacgagcatcacaaaaatcgacgctcaagtcagaggtggcgaaacccgacaggactataaagataccaggcgtttccccctggaagctccctcgtgcgctctcctgttccgaccctgccgcttaccggatacctgtccgcctttctcccttcgggaagcgtggcgctttctcatagctcacgctgtaggtatctcagttcggtgtaggtcgttcgctccaagctgggctgtgtgcacgaaccccccgttcagcccgaccgctgcgccttatccggtaactatcgtcttgagtccaacccggtaagacacgacttatcgccactggcagcagccactggtaacaggattagcagagcgaggtatgtaggcggtgctacagagttcttgaagtggtggcctaactacggctacactagaaggacagtatttggtatctgcgctctgctgaagccagttaccttcggaaaaagagttggtagctcttgatccggcaaacaaaccaccgctggtagcggtggtttttttgtttgcaagcagcagattacgcgcagaaaaaaaggatctcaagaagatcctttgatcttttctacggggtctgacgctcagtggaacgaaaactcacgttaagggattttggtcatgaggggtaataactgatataattaaattgaagctctaatttgtgagtttagtatacatgcatttacttataatacagttttttagttttgctggccgcatcttctcaaatatgcttcccagcctgcttttctgtaacgttcaccctctaccttagcatcccttccctttgcaaatagtcctcttccaacaataataatgtcagatcctgtagagaccacatcatccacggttctatactgttgacccaatgcgtctcccttgtcatctaaacccacaccgggtgtcataatcaaccaatcgtaaccttcatctcttccacccatgtctctttgagcaataaagccgataacaaaatctttgtcgctcttcgcaatgtcaacagtacccttagtatattctccagtagatagggagcccttgcatgacaattctgctaacatcaaaaggcctctaggttcctttgttacttcttctgccgcctgcttcaaaccgctaacaatacctgggcccaccacaccgtgtgcattcgtaatgtctgcccattctgctattctgtatacacccgcagagtactgcaatttgactgtattaccaatgtcagcaaattttctgtcttcgaagagtaaaaaattgtacttggcggataatgcctttagcggcttaactgtgccctccatggaaaaatcagtcaaaatatccacatgtgtttttagtaaacaaattttgggacctaatgcttcaactaactccagtaattccttggtggtacgaacatccaatgaagcacacaagtttgtttgcttttcgtgcatgatattaaatagcttggcagcaacaggactaggatgagtagcagcacgttccttatatgtagctttcgacatgatttatcttcgtttcctgcaggtttttgttctgtgcagttgggttaagaatactgggcaatttcatgtttcttcaacactacatatgcgtatatataccaatctaagtctgtgctccttccttcgttcttccttctgttcggagattaccgaatcaaaaaaatttcaaagaaaccgaaatcaaaaaaaagaataaaaaaaaaatgatgaattgaattgaaaagctagcttatcgatgataagctgtcaaagatgagaattaattccacggactatagactatactagatactccgtctactgtacgatacacttccgctcaggtccttgtcctttaacgaggccttaccactcttttgttactctattgatccagctcagcaaaggcagtgtgatctaagattctatcttcgcgatgtagtaaaactagctagaccgagaaagagactagaaatgcaaaaggcacttctacaatggctgccatcattattatccgatgtgacgctgcagcttctcaatgatattcgaatacgctttgaggagatacagcctaatatccgacaaactgttttacagatttacgatcgtacttgttacccatcattgaattttgaacatccgaacctgggagttttccctgaaacagatagtatatttgaacctgtataataatatatagtctagcgctttacggaagacaatgtatgtatttcggttcctggagaaactattgcatctattgcataggtaatcttgcacgtcgcatccccggttcattttctgcgtttccatcttgcacttcaatagcatatctttgttaacgaagcatctgtgcttcattttgtagaacaaaaatgcaacgcgagagcgctaatttttcaaacaaagaatctgagctgcatttttacagaacagaaatgcaacgcgaaagcgctattttaccaacgaagaatctgtgcttcatttttgtaaaacaaaaatgcaacgcgacgagagcgctaatttttcaaacaaagaatctgagctgcatttttacagaacagaaatgcaacgcgagagcgctattttaccaacaaagaatctatacttcttttttgttctacaaaaatgcatcccgagagcgctatttttctaacaaagcatcttagattactttttttctcctttgtgcgctctataatgcagtctcttgataactttttgcactgtaggtccgttaaggttagaagaaggctactttggtgtctattttctcttccataaaaaaagcctgactccacttcccgcgtttactgattactagcgaagctgcgggtgcattttttcaagataaaggcatccccgattatattctataccgatgtggattgcgcatactttgtgaacagaaagtgatagcgttgatgattcttcattggtcagaaaattatgaacggtttcttctattttgtctctatatactacgtataggaaatgtttacattttcgtattgttttcgattcactctatgaatagttcttactacaatttttttgtctaaagagtaatactagagataaacataaaaaatgtagaggtcgagtttagatgcaagttcaaggagcgaaaggtggatgggtaggttatatagggatatagcacagagatatatagcaaagagatacttttgagcaatgtttgtggaagcggtattcgcaatgggaagctccaccccggttgataatcagaaaagccccaaaaacaggaagattattatcaaaaaggatcttcacctagatccttttaaattaaaaatgaagttttaaatcaatctaaagtatatatgagtaaacttggtctgacagttaccaatgcttaatcagtgaggcacctatctcagcgatctgtctatttcgttcatccatagttgcctgactccccgtcgtgtagataactacgatacgggagcgcttaccatctggccccagtgctgcaatgataccgcgagacccacgctcaccggctccagatttatcagcaataaaccagccagccggaagggccgagcgcagaagtggtcctgcaactttatccgcctccatccagtctattaattgttgccgggaagctagagtaagtagttcgccagttaatagtttgcgcaacgttgttggcattgctacaggcatcgtggtgtcactctcgtcgtttggtatggcttcattcagctccggttcccaacgatcaaggcgagttacatgatcccccatgttgtgcaaaaaagcggttagctccttcggtcctccgatcgttgtcagaagtaagttggccgcagtgttatcactcatggttatggcagcactgcataattctcttactgtcatgccatccgtaagatgcttttctgtgactggtgagtactcaaccaagtcattctgagaatagtgtatgcggcgaccgagttgctcttgcccggcgtcaatacgggataatagtgtatcacatagcagaactttaaaagtgctcatcattggaaaacgttcttcggggcgaaaactctcaaggatcttaccgctgttgagatccagttcgatgtaacccactcgtgcacccaactgatcttcagcatcttttactttcaccagcgtttctgggtgagcaaaaacaggaaggcaaaatgccgcaaaaaagggaataagggcgacacggaaatgttgaatactcatactcttcctttttcaatattattgaagcatttatcagggttattgtctcatgagcggatacatatttgaatgtatttagaaaaataaacaaataggggttccgcgcacatttccccgaaaagtgccacctgctaagaaaccattattatcatgacattaacctataaaaataggcgtatcacgaggccctttcgtctcgcgcgtttcggtgatgacggtgaaaacctctgacacatgcagctcccggagacggtcacagcttgtctgtaagcggatgccgggagcagacaagcccgtcagggcgcgtcagcgggtgttggcgggtgtcggggctggcttaactatgcggcatcagagcagattgtactgagagtgcaccatagatcctgaggatcggggtgataaatcagtctgcgccacatcgggggaaacaaaatggcgcgagatctaaaaaaaaaggctccaaaaggagcctttcgcgctaccaggtaacgcgccactccgacgggattaacgagtgccgtaaacgacgatggttttaccgtgtgcggagatcaggttctgatcctcgagcatcttaagaattcgtcccacggtttgtctagagcagccgacaatctggccaatttcctgacgggtaattttgatttgcatgccgtccgggtgagtcatagcgtctggttgttttgccagattcagcagagtctgtgcaatgcggccgctgac\n"
                                           "                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCCTGACGGGTAATTTTGATTTGCATGCCGTCCGGGTGAGTCATAGCGTCTGGTTGTTTTGCCAGATTCAGCAGAGTCTGTGCAATGCGGCCGCTGAC\n")
    
    ## text8 cSEGUID wM7nM6oJer3bB6RV81IH78e02j4 7911bp
    list_of_formatted_seq_records = parse(text8)
    a=assembly.Assembly(list_of_formatted_seq_records, limit=28)
    candidate = a.circular_products[0]
    assert candidate.cseguid()=="wM7nM6oJer3bB6RV81IH78e02j4"

    
    
def test_MXblaster1(monkeypatch):
    monkeypatch.setenv("pydna_cached_funcs", "")
    from pydna          import assembly
    from pydna.parsers  import parse
    from pydna.amplify  import pcr
    from pydna.readers  import read
    from pydna.utils    import eq
    from importlib      import reload
    reload(assembly)
    
    ''' test MXblaster1'''

    primer = parse("primers.fas", ds=False)
    primer     = primer[::-1]
    primer     = primer[37:]

    for i,p in enumerate(primer):
        assert int(p.id.split("_")[0]) == i

    ''' These are PCRs to get the genes and the terminator-promoters '''
    AgTEFp          = pcr(primer[524],primer[523],read("pAG25.gb"))
    hph             = pcr(primer[502],primer[501],read("pAG32.gb"))
    KlLEU2tt        = pcr(primer[520],primer[519],read("KlLEU2tt.gb"))

    ''' The Gal1 promoter-ISceI fragment is made in two steps '''
    gal1_ISceI_1    = pcr(primer[234],primer[316],read("pGSHU 7180bp.gb"))
    gal1_ISceI_2    = pcr(primer[562],primer[234],gal1_ISceI_1)
    AgTEFt          = pcr(primer[522],primer[521],read("pAG25.gb"))

    ''' load pCAPs and pCAPs-pSU0 sequences as Dseqrecord objects '''
    pCAPs      = read("pCAPs-AjiI.gb")
    pCAPs_pSU0 = read("pCAPs-pSU0.gb")

    # cut the pCAPs vectors for cloning
    from Bio.Restriction import EcoRV, ZraI
    pCAPs_ZraI              = pCAPs.linearize(ZraI)
    pCAPs_PCR_prod          = pcr(primer[492],primer[493], pCAPs)
    pCAPs_EcoRV             = pCAPs.linearize(EcoRV)
    pCAPs_pSU0_E_Z, stuffer = pCAPs_pSU0.cut(EcoRV, ZraI)


    # make the pCAPs clones, six altoghether
    pCAPs_ZraI_AgTEFp       = (pCAPs_ZraI + AgTEFp ).looped()

    pCAPs_PCR_prod_hph      = (pCAPs_PCR_prod  + hph ).looped()
    pCAPs_EcoRV_KlLEU2tt    = (pCAPs_EcoRV     + KlLEU2tt ).looped()

    pCAPs_ZraI_KlLEU2tt         = (pCAPs_ZraI      + KlLEU2tt ).looped()
    pCAPs_PCR_prod_gal1_ISceI_2 = (pCAPs_PCR_prod  + gal1_ISceI_2 ).looped()
    pCAPs_EcoRV_AgTEFt          = (pCAPs_EcoRV     + AgTEFt ).looped()

    # PCR each clone for the assembly in pCAPs

    A_AgTEFp_b     = pcr([primer[167],primer[493]], pCAPs_ZraI_AgTEFp)
    B_hph_c        = pcr([primer[467],primer[468]], pCAPs_PCR_prod_hph)
    C_KlLEU2tt_d   = pcr([primer[492],primer[166]], pCAPs_EcoRV_KlLEU2tt)

    #Homologous recombination of the two tp-gene-tp building blocks

    a= assembly.Assembly( ( pCAPs_pSU0_E_Z,
                  A_AgTEFp_b,
                  B_hph_c,
                  C_KlLEU2tt_d), limit=28)

    assert a.circular_products[0].cseguid()=="wM7nM6oJer3bB6RV81IH78e02j4"
    assert len(a.circular_products[0])==7911
    YPK0_AgTEFp_hph_KlLEU2tt = a.circular_products[0]
    
    x=YPK0_AgTEFp_hph_KlLEU2tt

    AgTEFp_hph_KlLEU2tt_2 = pcr(primer[166],primer[167], YPK0_AgTEFp_hph_KlLEU2tt)

    A_KlLEU2tt_b   = pcr([primer[167],primer[567]], pCAPs_ZraI_KlLEU2tt)
    B_gal1_ISceI_c = pcr([primer[467],primer[468]], pCAPs_PCR_prod_gal1_ISceI_2)
    C_AgTEFt_d     = pcr([primer[568],primer[166]], pCAPs_EcoRV_AgTEFt)

    a= assembly.Assembly(( pCAPs_pSU0_E_Z,
                           A_KlLEU2tt_b,
                           B_gal1_ISceI_c,
                           C_AgTEFt_d), limit=25)
    
    assert a.circular_products[0].cseguid()=="ZHJqzSnqRxJsdKN5Pu5KP6coR6o"
    assert len(a.circular_products[0])==8099    
    YPK0_KlLEU2tt_gal1_ISceI_AgTEFt = a.circular_products[0]
    
    feats = {}
    
    for f in YPK0_AgTEFp_hph_KlLEU2tt.features:
        feats[f.qualifiers["label"][0]] = f.extract(YPK0_AgTEFp_hph_KlLEU2tt).seq
        
    oldfeats = {}
    
    for x in ( pCAPs_pSU0_E_Z, A_AgTEFp_b, B_hph_c, C_KlLEU2tt_d):
        for f in x.features:            
            oldfeats[f.qualifiers["label"][0]] = f.extract(x).seq    

    KlLEU2tt_gal1_ISceI_AgTEFt_2 =  pcr(primer[166],primer[167], YPK0_KlLEU2tt_gal1_ISceI_AgTEFt)

    a= assembly.Assembly(( AgTEFp_hph_KlLEU2tt_2,
                           KlLEU2tt_gal1_ISceI_AgTEFt_2,
                           pCAPs_pSU0_E_Z), limit=61)
    
    assert len(a.circular_products[0])==9772    
    assert a.circular_products[0].cseguid()=="QnsJ7ATZXSy2QuN4hy51SZw_aU0"   
    pCAPs_MX4blaster1 = a.circular_products[0]

    pCAPs_MX4blaster1=pCAPs_MX4blaster1.synced("tcgcgcgtttcggtgatgacggtgaaaacc")

    assert pCAPs_MX4blaster1.seguid()=="X9WqaNk2lw6FbZlJr995MaDfn-M"

    from Bio.Restriction import AjiI, AgeI

    AX023560 = read("AX023560.gb")

    GAL10prom_slice= slice(AX023560.features[1].location.start,
                           AX023560.features[1].location.end)

    GAL10prom = AX023560[GAL10prom_slice]

    assert GAL10prom.seq == AX023560.features[1].extract(AX023560).seq

    GIN11M86 = read("GIN11M86.gb")

    GAL_GIN = pcr(primer[592],primer[593], GAL10prom + GIN11M86)

    assert GAL_GIN.seguid() == "7Lkfw8dsz9_kkBU3XXnz4KAON3A"

    assert pCAPs.seguid() =="-XHU8OxITyHGTl9XtMrJ4NvEv3o"

    pCAPs_GAL_GIN = ( pCAPs.cut(AjiI)[0] + GAL_GIN ).looped()

    assert pCAPs_GAL_GIN.seguid() == "T1eWCPIXPlq2HriSfpFSNnGwmd4"

    GAL_GIN2 = pcr(primer[592], primer[467], pCAPs_GAL_GIN)

    assert GAL_GIN2.seguid() =="zdIU4vjdfOxLkTTnKzIxhphnewg"

    assert pCAPs_MX4blaster1.seguid() =="X9WqaNk2lw6FbZlJr995MaDfn-M" # 9772bp__a

    pCAPs_MX4blaster1_AgeI = pCAPs_MX4blaster1.cut(AgeI)[0]

    pCAPs_MX4blaster1_AgeI.seq = pCAPs_MX4blaster1_AgeI.seq.fill_in()

    a = assembly.Assembly([GAL_GIN2, pCAPs_MX4blaster1_AgeI], limit=30, max_nodes=2)
    assert len(a.circular_products[0])==10566
    assert a.circular_products[0].cseguid()=="LK6idufxMXFHL5shXakwO3lciMU"
    
    pCAPs_MX4blaster2 = a.circular_products[0]

    pCAPs_MX4blaster2 = pCAPs_MX4blaster2.synced("tcgcgcgtttcggtgatgacggtgaaaacc")
    
    assert len(pCAPs_MX4blaster2) == 10566 
    pCAPs_MX4blaster2_old = read("pMX4blaster2_old.gb")
    
    assert len(pCAPs_MX4blaster2_old) == 10566 
    assert pCAPs_MX4blaster2_old.seguid() == "7B4KKAeM2x8npjkp5U942rtMbB8"
    assert eq(pCAPs_MX4blaster2, pCAPs_MX4blaster2_old)
    assert pCAPs_MX4blaster2.seguid() == "7B4KKAeM2x8npjkp5U942rtMbB8"






def test_assemble_pGUP1(monkeypatch):
    
    monkeypatch.setenv("pydna_cached_funcs", "")
    
    from pydna.readers  import read
    from pydna          import assembly
    from pydna.utils    import eq
    from pydna.amplify  import pcr
    from importlib      import reload
    reload(assembly)
    
    GUP1rec1sens = read("GUP1rec1sens.txt")
    GUP1rec2AS = read("GUP1rec2AS.txt")
    GUP1_locus = read("GUP1_locus.gb")
    pGREG505 = read("pGREG505.gb")

    insert = pcr(GUP1rec1sens, GUP1rec2AS, GUP1_locus)

    from Bio.Restriction import SalI

    his3, lin_vect = pGREG505.cut(SalI)

    ab = assembly.Assembly([insert, lin_vect], limit=28)
    
    pGUP1 = ab.circular_products[0]
   
    pGUP1 = pGUP1.synced(pGREG505.seq[:50])    
    
    pGUP1_correct = read("pGUP1_correct.gb")        
    
    assert len(pGUP1_correct) == 9981
    assert len(pGUP1) == 9981
    assert eq(pGUP1, pGUP1_correct)     
    assert pGUP1_correct.seguid() == "42wIByERn2kSe_Exn405RYwhffU"       
    assert pGUP1.seguid() == "42wIByERn2kSe_Exn405RYwhffU"
    
  
def test_35(monkeypatch):
    import sys
    sys.modules.pop("pydna.assembly", None)
    from collections import namedtuple
    Mock_version_info = namedtuple('version_info', "major minor micro releaselevel serial")
    mvi35 = Mock_version_info(major=3, minor=5, micro=5, releaselevel='final', serial=0)
    monkeypatch.setattr("sys.version_info", mvi35)
    from pydna.assembly import _od
    from collections import OrderedDict
    assert _od==OrderedDict
    sys.modules.pop("pydna.assembly", None)


def test_36(monkeypatch):
    import sys
    sys.modules.pop("pydna.assembly", None)
    from collections import namedtuple
    Mock_version_info = namedtuple('version_info', "major minor micro releaselevel serial")
    mvi36 = Mock_version_info(major=3, minor=6, micro=5, releaselevel='final', serial=0)
    monkeypatch.setattr("sys.version_info", mvi36)
    from pydna.assembly import _od
    assert _od==dict
    sys.modules.pop("pydna.assembly", None)
    
if __name__ == '__main__':
    pytest.main([__file__, "-x", "-vv", "-s","--cov=pydna","--cov-report=html"])