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84 changes: 84 additions & 0 deletions cgc/draft-logs/Acute_Myeloid_Leukemia_bam2fasta.log
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2016-10-26 07:00:44,640 INFO Creating draft tasks.
2016-10-26 07:01:02,849 INFO Task 1: 4 files, 472.53 Gb
2016-10-26 07:01:02,849 INFO Name: bam2fasta_Acute Myeloid Leukemia_1_task_4_files_472.53Gb
2016-10-26 07:01:07,380 INFO Task 2: 4 files, 439.56 Gb
2016-10-26 07:01:07,380 INFO Name: bam2fasta_Acute Myeloid Leukemia_2_task_4_files_439.56Gb
2016-10-26 07:01:11,036 INFO Task 3: 5 files, 455.29 Gb
2016-10-26 07:01:11,036 INFO Name: bam2fasta_Acute Myeloid Leukemia_3_task_5_files_455.29Gb
2016-10-26 07:01:14,584 INFO Task 4: 4 files, 447.33 Gb
2016-10-26 07:01:14,584 INFO Name: bam2fasta_Acute Myeloid Leukemia_4_task_4_files_447.33Gb
2016-10-26 07:01:18,131 INFO Task 5: 4 files, 413.11 Gb
2016-10-26 07:01:18,131 INFO Name: bam2fasta_Acute Myeloid Leukemia_5_task_4_files_413.11Gb
2016-10-26 07:01:21,549 INFO Task 6: 4 files, 406.11 Gb
2016-10-26 07:01:21,549 INFO Name: bam2fasta_Acute Myeloid Leukemia_6_task_4_files_406.11Gb
2016-10-26 07:01:25,134 INFO Task 7: 4 files, 454.42 Gb
2016-10-26 07:01:25,134 INFO Name: bam2fasta_Acute Myeloid Leukemia_7_task_4_files_454.42Gb
2016-10-26 07:01:28,548 INFO Task 8: 4 files, 418.23 Gb
2016-10-26 07:01:28,548 INFO Name: bam2fasta_Acute Myeloid Leukemia_8_task_4_files_418.23Gb
2016-10-26 07:01:32,505 INFO Task 9: 3 files, 293.17 Gb
2016-10-26 07:01:32,505 INFO Name: bam2fasta_Acute Myeloid Leukemia_9_task_3_files_293.17Gb
2016-10-26 07:01:36,042 INFO Task 10: 1 files, 854.86 Gb
2016-10-26 07:01:36,042 INFO Name: bam2fasta_Acute Myeloid Leukemia_10_task_1_files_854.86Gb
2016-10-26 07:01:39,577 INFO Task 11: 4 files, 418.07 Gb
2016-10-26 07:01:39,577 INFO Name: bam2fasta_Acute Myeloid Leukemia_11_task_4_files_418.07Gb
2016-10-26 07:01:43,029 INFO Task 12: 4 files, 489.59 Gb
2016-10-26 07:01:43,029 INFO Name: bam2fasta_Acute Myeloid Leukemia_12_task_4_files_489.59Gb
2016-10-26 07:01:46,599 INFO Task 13: 4 files, 401.21 Gb
2016-10-26 07:01:46,599 INFO Name: bam2fasta_Acute Myeloid Leukemia_13_task_4_files_401.21Gb
2016-10-26 07:01:50,561 INFO Task 14: 7 files, 428.82 Gb
2016-10-26 07:01:50,561 INFO Name: bam2fasta_Acute Myeloid Leukemia_14_task_7_files_428.82Gb
2016-10-26 07:01:54,015 INFO Task 15: 10 files, 418.48 Gb
2016-10-26 07:01:54,015 INFO Name: bam2fasta_Acute Myeloid Leukemia_15_task_10_files_418.48Gb
2016-10-26 07:01:57,628 INFO Task 16: 5 files, 402.55 Gb
2016-10-26 07:01:57,628 INFO Name: bam2fasta_Acute Myeloid Leukemia_16_task_5_files_402.55Gb
2016-10-26 07:02:01,418 INFO Task 17: 9 files, 447.85 Gb
2016-10-26 07:02:01,418 INFO Name: bam2fasta_Acute Myeloid Leukemia_17_task_9_files_447.85Gb
2016-10-26 07:02:05,105 INFO Task 18: 18 files, 494.35 Gb
2016-10-26 07:02:05,106 INFO Name: bam2fasta_Acute Myeloid Leukemia_18_task_18_files_494.35Gb
2016-10-26 07:02:08,896 INFO Task 19: 61 files, 480.26 Gb
2016-10-26 07:02:08,896 INFO Name: bam2fasta_Acute Myeloid Leukemia_19_task_61_files_480.26Gb
2016-10-26 07:02:13,401 INFO Task 20: 42 files, 476.65 Gb
2016-10-26 07:02:13,401 INFO Name: bam2fasta_Acute Myeloid Leukemia_20_task_42_files_476.65Gb
2016-10-26 07:02:16,880 INFO Task 21: 7 files, 421.59 Gb
2016-10-26 07:02:16,880 INFO Name: bam2fasta_Acute Myeloid Leukemia_21_task_7_files_421.59Gb
2016-10-26 07:02:20,374 INFO Task 22: 6 files, 413.42 Gb
2016-10-26 07:02:20,374 INFO Name: bam2fasta_Acute Myeloid Leukemia_22_task_6_files_413.42Gb
2016-10-26 07:02:23,831 INFO Task 23: 7 files, 403.49 Gb
2016-10-26 07:02:23,831 INFO Name: bam2fasta_Acute Myeloid Leukemia_23_task_7_files_403.49Gb
2016-10-26 07:02:27,531 INFO Task 24: 8 files, 445.93 Gb
2016-10-26 07:02:27,532 INFO Name: bam2fasta_Acute Myeloid Leukemia_24_task_8_files_445.93Gb
2016-10-26 07:02:31,115 INFO Task 25: 11 files, 483.59 Gb
2016-10-26 07:02:31,115 INFO Name: bam2fasta_Acute Myeloid Leukemia_25_task_11_files_483.59Gb
2016-10-26 07:02:34,699 INFO Task 26: 9 files, 474.25 Gb
2016-10-26 07:02:34,699 INFO Name: bam2fasta_Acute Myeloid Leukemia_26_task_9_files_474.25Gb
2016-10-26 07:02:38,232 INFO Task 27: 9 files, 418.57 Gb
2016-10-26 07:02:38,232 INFO Name: bam2fasta_Acute Myeloid Leukemia_27_task_9_files_418.57Gb
2016-10-26 07:02:41,867 INFO Task 28: 6 files, 440.68 Gb
2016-10-26 07:02:41,867 INFO Name: bam2fasta_Acute Myeloid Leukemia_28_task_6_files_440.68Gb
2016-10-26 07:02:45,451 INFO Task 29: 12 files, 434.12 Gb
2016-10-26 07:02:45,451 INFO Name: bam2fasta_Acute Myeloid Leukemia_29_task_12_files_434.12Gb
2016-10-26 07:02:49,035 INFO Task 30: 11 files, 452.20 Gb
2016-10-26 07:02:49,035 INFO Name: bam2fasta_Acute Myeloid Leukemia_30_task_11_files_452.20Gb
2016-10-26 07:02:53,045 INFO Task 31: 10 files, 464.37 Gb
2016-10-26 07:02:53,046 INFO Name: bam2fasta_Acute Myeloid Leukemia_31_task_10_files_464.37Gb
2016-10-26 07:02:56,918 INFO Task 32: 7 files, 490.20 Gb
2016-10-26 07:02:56,918 INFO Name: bam2fasta_Acute Myeloid Leukemia_32_task_7_files_490.20Gb
2016-10-26 07:03:01,025 INFO Task 33: 4 files, 422.91 Gb
2016-10-26 07:03:01,025 INFO Name: bam2fasta_Acute Myeloid Leukemia_33_task_4_files_422.91Gb
2016-10-26 07:03:04,700 INFO Task 34: 5 files, 488.80 Gb
2016-10-26 07:03:04,701 INFO Name: bam2fasta_Acute Myeloid Leukemia_34_task_5_files_488.80Gb
2016-10-26 07:03:08,388 INFO Task 35: 4 files, 444.97 Gb
2016-10-26 07:03:08,388 INFO Name: bam2fasta_Acute Myeloid Leukemia_35_task_4_files_444.97Gb
2016-10-26 07:03:11,870 INFO Task 36: 4 files, 423.55 Gb
2016-10-26 07:03:11,870 INFO Name: bam2fasta_Acute Myeloid Leukemia_36_task_4_files_423.55Gb
2016-10-26 07:03:15,554 INFO Task 37: 5 files, 538.43 Gb
2016-10-26 07:03:15,554 INFO Name: bam2fasta_Acute Myeloid Leukemia_37_task_5_files_538.43Gb
2016-10-26 07:03:19,082 INFO Task 38: 4 files, 412.51 Gb
2016-10-26 07:03:19,082 INFO Name: bam2fasta_Acute Myeloid Leukemia_38_task_4_files_412.51Gb
2016-10-26 07:03:22,596 INFO Task 39: 5 files, 485.47 Gb
2016-10-26 07:03:22,596 INFO Name: bam2fasta_Acute Myeloid Leukemia_39_task_5_files_485.47Gb
2016-10-26 07:03:26,307 INFO Total tasks created: 39
2016-10-26 07:03:26,308 INFO Total files tasked: 335
2016-10-26 07:03:26,308 INFO Total files for disease type: 335
2016-10-26 07:03:26,308 INFO Total WGS files: 156
2016-10-26 07:03:26,308 INFO Total RNA-Seq files: 179
9 changes: 9 additions & 0 deletions cgc/draft-logs/Bladder_Urothelial_Carcinoma_workflow.log
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2016-10-27 10:17:55,678 INFO Creating draft tasks.
2016-10-27 10:19:12,791 INFO Task 1: 170 files, 300.48 Gb
2016-10-27 10:19:57,122 INFO Task 2: 221 files, 309.73 Gb
2016-10-27 10:20:41,511 INFO Task 3: 182 files, 301.51 Gb
2016-10-27 10:21:26,403 INFO Task 4: 147 files, 300.07 Gb
2016-10-27 10:22:09,265 INFO Task 5: 9 files, 16.36 Gb
2016-10-27 10:22:49,118 INFO Total tasks created: 5
2016-10-27 10:22:49,118 INFO Total files tasked: 729
2016-10-27 10:22:49,118 INFO Total files for disease type: 729
9 changes: 9 additions & 0 deletions cgc/draft-logs/Prostate_Adenocarcinoma_workflow.log
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2016-10-27 10:39:43,383 INFO Creating draft tasks.
2016-10-27 10:41:06,285 INFO Task 1: 176 files, 301.72 Gb
2016-10-27 10:41:52,806 INFO Task 2: 178 files, 300.85 Gb
2016-10-27 10:42:35,340 INFO Task 3: 164 files, 302.97 Gb
2016-10-27 10:43:18,111 INFO Task 4: 202 files, 300.78 Gb
2016-10-27 10:44:02,004 INFO Task 5: 110 files, 150.99 Gb
2016-10-27 10:44:43,295 INFO Total tasks created: 5
2016-10-27 10:44:43,297 INFO Total files tasked: 830
2016-10-27 10:44:43,297 INFO Total files for disease type: 830
105 changes: 105 additions & 0 deletions cgc/draft-logs/Skin_Cutaneous_Melanoma_bam2fasta.log
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2016-10-27 11:14:52,778 INFO Running tasks!
2016-10-27 11:15:43,226 INFO Creating draft tasks.
2016-10-27 11:16:32,244 INFO Task 1: 3 files, 434.07 Gb
2016-10-27 11:16:32,244 INFO Name: bam2fasta_Skin Cutaneous Melanoma_1_task_3_files_434.07Gb
2016-10-27 11:16:36,425 INFO Task 2: 3 files, 422.74 Gb
2016-10-27 11:16:36,425 INFO Name: bam2fasta_Skin Cutaneous Melanoma_2_task_3_files_422.74Gb
2016-10-27 11:16:40,028 INFO Task 3: 2 files, 460.50 Gb
2016-10-27 11:16:40,028 INFO Name: bam2fasta_Skin Cutaneous Melanoma_3_task_2_files_460.50Gb
2016-10-27 11:16:43,895 INFO Task 4: 3 files, 574.93 Gb
2016-10-27 11:16:43,895 INFO Name: bam2fasta_Skin Cutaneous Melanoma_4_task_3_files_574.93Gb
2016-10-27 11:16:47,488 INFO Task 5: 3 files, 582.49 Gb
2016-10-27 11:16:47,488 INFO Name: bam2fasta_Skin Cutaneous Melanoma_5_task_3_files_582.49Gb
2016-10-27 11:16:51,127 INFO Task 6: 3 files, 457.84 Gb
2016-10-27 11:16:51,127 INFO Name: bam2fasta_Skin Cutaneous Melanoma_6_task_3_files_457.84Gb
2016-10-27 11:16:54,612 INFO Task 7: 3 files, 456.07 Gb
2016-10-27 11:16:54,613 INFO Name: bam2fasta_Skin Cutaneous Melanoma_7_task_3_files_456.07Gb
2016-10-27 11:16:58,141 INFO Task 8: 3 files, 378.30 Gb
2016-10-27 11:16:58,141 INFO Name: bam2fasta_Skin Cutaneous Melanoma_8_task_3_files_378.30Gb
2016-10-27 11:17:01,972 INFO Task 9: 2 files, 419.12 Gb
2016-10-27 11:17:01,973 INFO Name: bam2fasta_Skin Cutaneous Melanoma_9_task_2_files_419.12Gb
2016-10-27 11:17:05,613 INFO Task 10: 3 files, 422.92 Gb
2016-10-27 11:17:05,613 INFO Name: bam2fasta_Skin Cutaneous Melanoma_10_task_3_files_422.92Gb
2016-10-27 11:17:09,194 INFO Task 11: 3 files, 435.00 Gb
2016-10-27 11:17:09,194 INFO Name: bam2fasta_Skin Cutaneous Melanoma_11_task_3_files_435.00Gb
2016-10-27 11:17:12,646 INFO Task 12: 3 files, 575.02 Gb
2016-10-27 11:17:12,646 INFO Name: bam2fasta_Skin Cutaneous Melanoma_12_task_3_files_575.02Gb
2016-10-27 11:17:16,088 INFO Task 13: 3 files, 532.92 Gb
2016-10-27 11:17:16,088 INFO Name: bam2fasta_Skin Cutaneous Melanoma_13_task_3_files_532.92Gb
2016-10-27 11:17:19,595 INFO Task 14: 3 files, 484.21 Gb
2016-10-27 11:17:19,595 INFO Name: bam2fasta_Skin Cutaneous Melanoma_14_task_3_files_484.21Gb
2016-10-27 11:17:23,247 INFO Task 15: 3 files, 460.11 Gb
2016-10-27 11:17:23,247 INFO Name: bam2fasta_Skin Cutaneous Melanoma_15_task_3_files_460.11Gb
2016-10-27 11:17:26,773 INFO Task 16: 3 files, 450.46 Gb
2016-10-27 11:17:26,773 INFO Name: bam2fasta_Skin Cutaneous Melanoma_16_task_3_files_450.46Gb
2016-10-27 11:17:30,392 INFO Task 17: 3 files, 426.53 Gb
2016-10-27 11:17:30,392 INFO Name: bam2fasta_Skin Cutaneous Melanoma_17_task_3_files_426.53Gb
2016-10-27 11:17:34,077 INFO Task 18: 4 files, 501.76 Gb
2016-10-27 11:17:34,077 INFO Name: bam2fasta_Skin Cutaneous Melanoma_18_task_4_files_501.76Gb
2016-10-27 11:17:37,638 INFO Task 19: 3 files, 407.31 Gb
2016-10-27 11:17:37,638 INFO Name: bam2fasta_Skin Cutaneous Melanoma_19_task_3_files_407.31Gb
2016-10-27 11:17:42,133 INFO Task 20: 5 files, 549.24 Gb
2016-10-27 11:17:42,133 INFO Name: bam2fasta_Skin Cutaneous Melanoma_20_task_5_files_549.24Gb
2016-10-27 11:17:46,135 INFO Task 21: 4 files, 504.22 Gb
2016-10-27 11:17:46,135 INFO Name: bam2fasta_Skin Cutaneous Melanoma_21_task_4_files_504.22Gb
2016-10-27 11:17:49,588 INFO Task 22: 3 files, 535.80 Gb
2016-10-27 11:17:49,588 INFO Name: bam2fasta_Skin Cutaneous Melanoma_22_task_3_files_535.80Gb
2016-10-27 11:17:53,095 INFO Task 23: 6 files, 465.45 Gb
2016-10-27 11:17:53,095 INFO Name: bam2fasta_Skin Cutaneous Melanoma_23_task_6_files_465.45Gb
2016-10-27 11:17:56,707 INFO Task 24: 3 files, 529.30 Gb
2016-10-27 11:17:56,709 INFO Name: bam2fasta_Skin Cutaneous Melanoma_24_task_3_files_529.30Gb
2016-10-27 11:18:00,747 INFO Task 25: 2 files, 463.86 Gb
2016-10-27 11:18:00,748 INFO Name: bam2fasta_Skin Cutaneous Melanoma_25_task_2_files_463.86Gb
2016-10-27 11:18:04,849 INFO Task 26: 3 files, 371.20 Gb
2016-10-27 11:18:04,850 INFO Name: bam2fasta_Skin Cutaneous Melanoma_26_task_3_files_371.20Gb
2016-10-27 11:18:08,399 INFO Task 27: 2 files, 420.33 Gb
2016-10-27 11:18:08,399 INFO Name: bam2fasta_Skin Cutaneous Melanoma_27_task_2_files_420.33Gb
2016-10-27 11:18:12,067 INFO Task 28: 5 files, 559.42 Gb
2016-10-27 11:18:12,067 INFO Name: bam2fasta_Skin Cutaneous Melanoma_28_task_5_files_559.42Gb
2016-10-27 11:18:15,588 INFO Task 29: 2 files, 407.15 Gb
2016-10-27 11:18:15,589 INFO Name: bam2fasta_Skin Cutaneous Melanoma_29_task_2_files_407.15Gb
2016-10-27 11:18:19,134 INFO Task 30: 2 files, 389.90 Gb
2016-10-27 11:18:19,134 INFO Name: bam2fasta_Skin Cutaneous Melanoma_30_task_2_files_389.90Gb
2016-10-27 11:18:22,648 INFO Task 31: 2 files, 436.34 Gb
2016-10-27 11:18:22,648 INFO Name: bam2fasta_Skin Cutaneous Melanoma_31_task_2_files_436.34Gb
2016-10-27 11:18:26,186 INFO Task 32: 17 files, 404.14 Gb
2016-10-27 11:18:26,186 INFO Name: bam2fasta_Skin Cutaneous Melanoma_32_task_17_files_404.14Gb
2016-10-27 11:18:29,860 INFO Task 33: 23 files, 413.66 Gb
2016-10-27 11:18:29,861 INFO Name: bam2fasta_Skin Cutaneous Melanoma_33_task_23_files_413.66Gb
2016-10-27 11:18:33,573 INFO Task 34: 23 files, 412.10 Gb
2016-10-27 11:18:33,573 INFO Name: bam2fasta_Skin Cutaneous Melanoma_34_task_23_files_412.10Gb
2016-10-27 11:18:37,608 INFO Task 35: 20 files, 406.68 Gb
2016-10-27 11:18:37,608 INFO Name: bam2fasta_Skin Cutaneous Melanoma_35_task_20_files_406.68Gb
2016-10-27 11:18:41,253 INFO Task 36: 21 files, 405.06 Gb
2016-10-27 11:18:41,253 INFO Name: bam2fasta_Skin Cutaneous Melanoma_36_task_21_files_405.06Gb
2016-10-27 11:18:44,587 INFO Task 37: 20 files, 401.02 Gb
2016-10-27 11:18:44,587 INFO Name: bam2fasta_Skin Cutaneous Melanoma_37_task_20_files_401.02Gb
2016-10-27 11:18:48,430 INFO Task 38: 24 files, 413.81 Gb
2016-10-27 11:18:48,431 INFO Name: bam2fasta_Skin Cutaneous Melanoma_38_task_24_files_413.81Gb
2016-10-27 11:18:52,655 INFO Task 39: 22 files, 420.33 Gb
2016-10-27 11:18:52,655 INFO Name: bam2fasta_Skin Cutaneous Melanoma_39_task_22_files_420.33Gb
2016-10-27 11:18:56,307 INFO Task 40: 24 files, 405.59 Gb
2016-10-27 11:18:56,308 INFO Name: bam2fasta_Skin Cutaneous Melanoma_40_task_24_files_405.59Gb
2016-10-27 11:18:59,965 INFO Task 41: 30 files, 406.05 Gb
2016-10-27 11:18:59,965 INFO Name: bam2fasta_Skin Cutaneous Melanoma_41_task_30_files_406.05Gb
2016-10-27 11:19:04,092 INFO Task 42: 42 files, 400.29 Gb
2016-10-27 11:19:04,092 INFO Name: bam2fasta_Skin Cutaneous Melanoma_42_task_42_files_400.29Gb
2016-10-27 11:19:08,597 INFO Task 43: 61 files, 406.47 Gb
2016-10-27 11:19:08,597 INFO Name: bam2fasta_Skin Cutaneous Melanoma_43_task_61_files_406.47Gb
2016-10-27 11:19:12,739 INFO Task 44: 54 files, 403.06 Gb
2016-10-27 11:19:12,739 INFO Name: bam2fasta_Skin Cutaneous Melanoma_44_task_54_files_403.06Gb
2016-10-27 11:19:17,027 INFO Task 45: 59 files, 405.71 Gb
2016-10-27 11:19:17,027 INFO Name: bam2fasta_Skin Cutaneous Melanoma_45_task_59_files_405.71Gb
2016-10-27 11:19:20,989 INFO Task 46: 59 files, 400.48 Gb
2016-10-27 11:19:20,989 INFO Name: bam2fasta_Skin Cutaneous Melanoma_46_task_59_files_400.48Gb
2016-10-27 11:19:24,573 INFO Task 47: 66 files, 405.73 Gb
2016-10-27 11:19:24,573 INFO Name: bam2fasta_Skin Cutaneous Melanoma_47_task_66_files_405.73Gb
2016-10-27 11:19:28,377 INFO Task 48: 67 files, 400.49 Gb
2016-10-27 11:19:28,377 INFO Name: bam2fasta_Skin Cutaneous Melanoma_48_task_67_files_400.49Gb
2016-10-27 11:19:32,428 INFO Task 49: 66 files, 378.85 Gb
2016-10-27 11:19:32,428 INFO Name: bam2fasta_Skin Cutaneous Melanoma_49_task_66_files_378.85Gb
2016-10-27 11:19:36,037 INFO Total tasks created: 49
2016-10-27 11:19:36,037 INFO Total files tasked: 793
2016-10-27 11:19:36,037 INFO Total files for disease type: 793
2016-10-27 11:19:36,037 INFO Total WGS files: 320
2016-10-27 11:19:36,037 INFO Total RNA-Seq files: 473
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