v2.0.0

Replace USEARCH with VSEARCH.

Full Changelog: v1.0.4...v2.0.0

v1.0.4 (Emergency Fix)

Fix #9 mifish crashes when a group has been skipped.

Note: This would be the last release based on USEARCH

v1.0.3

Fix file messy: the order of files under some OS are not in consistent.

v1.0.2 (Emergency Fix)

Emergency Fix: skip files that does not end with .gz, .bz2 or .xz

v1.0.1

1. Use HSP overlap length in the Excel output. #2
2. Improve the detection of empty haploids
3. Add parameters to keep/remove temporary files and UNOISE3 options
4. Add output of Haploid ID in Excel
5. Add output of confidences in non-fish organisms in Excel
6. Assign the range of amplicon lengths to cutadapter, and discard reads without primers
7. Require a query coverage of > 90% in BLAST

v1.0.0

This is the first release