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FIX: use inceptionv4 from timm #69

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merged 4 commits into from
Jan 15, 2023
Merged

FIX: use inceptionv4 from timm #69

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811b029
use inceptionv4 from timm
kaczmarj Jan 15, 2023
ba1bc24
use inception_v4nobn with help of timm
kaczmarj Jan 15, 2023
2931b11
rm unused default_cfgs
kaczmarj Jan 15, 2023
a80d029
ignore timm types
kaczmarj Jan 15, 2023
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2 changes: 1 addition & 1 deletion setup.cfg
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Original file line number Diff line number Diff line change
Expand Up @@ -89,7 +89,7 @@ ignore_missing_imports = True
ignore_missing_imports = True
[mypy-pandas]
ignore_missing_imports = True
[mypy-timm]
[mypy-timm.*]
ignore_missing_imports = True
[mypy-scipy.stats]
ignore_missing_imports = True
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6 changes: 3 additions & 3 deletions tests/test_all.py
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Expand Up @@ -216,9 +216,9 @@ def test_cli_run_args(tmp_path: Path):
350,
144,
),
# Inceptionv4 TCGA-BRCA-v1
# Inception_v4 TCGA-BRCA-v1
(
"inceptionv4",
"inception_v4",
"TCGA-BRCA-v1",
["notumor", "tumor"],
[0.9564113020896912, 0.043588679283857346],
Expand All @@ -227,7 +227,7 @@ def test_cli_run_args(tmp_path: Path):
),
# Inceptionv4nobn TCGA-TILs-v1
(
"inceptionv4nobn",
"inception_v4nobn",
"TCGA-TILs-v1",
["notils", "tils"],
[1.0, 3.427359524660334e-12],
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306 changes: 0 additions & 306 deletions wsinfer/_modellib/inceptionv4.py
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