for 3.5.6

README.md

@@ -43,7 +43,7 @@ Packages - Packages are built in the viewer service using parcel, mount a differ
 
 To use PathDB, use quip-pathdb.yml instead of caMicroscope.yml. This deployment does not include the auth and loader as separate services, as this PathDB provides that functionality.
 
-Running QuIP with PathDB:
+Running QuIP with PathDB (https://github.com/SBU-BMI/PathDB):
 
 0) place yourself in quip\_distro folder.<br>
 1) copy config/httpd.conf.template to config/httpd.conf<br>

caMicroscope.yml

@@ -40,15 +40,15 @@ services:
     volumes:
       - ./images/:/images/
   viewer:
-    build: "https://github.com/camicroscope/caMicroscope.git#v3.5.2"
+    build: "https://github.com/camicroscope/caMicroscope.git#v3.5.6"
     container_name: ca-front
     restart: unless-stopped
     volumes:
       - ./config/login.html:/var/www/html/login.html
     logging:
       driver: none
   loader:
-    build: "https://github.com/camicroscope/SlideLoader.git#v3.4.3"
+    build: "https://github.com/camicroscope/SlideLoader.git#v3.5.6"
     container_name: ca-load
     restart: unless-stopped
     logging:

quip-pathdb.yml

@@ -53,7 +53,7 @@ services:
     logging:
       driver: none
   pathdb:
-    build: "https://github.com/SBU-BMI/PathDB.git#1.2.0"
+    build: "https://github.com/SBU-BMI/PathDB.git#1.2.1"
     container_name: quip-pathdb
     restart: unless-stopped
     ports: ["443:443","80:80"]
@@ -71,9 +71,6 @@ services:
     volumes:
       - ./data:/data/
       - ./images:/data/images
-    environment:
-      - QUIP_IMAGE_PATH=$PWD/images
-      - QUIP_DATA_PATH=$PWD/data
   segloader:
     build: "https://github.com/SBU-BMI/SegmentationLoader.git#1.0.1"
     container_name: quip-segloader