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fix README.md
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TheoPis committed Jul 20, 2020
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Expand Up @@ -11,17 +11,17 @@ This repository contains a Python3 Tensorflow implementation of the methods desc
- [vgg19 pretrained weights][vgg19] (required only for computing a perceptual loss, must be downloaded and extracted)

## Contents
* Pretrained model weights and code to perform vessel segmentation on OCTA images. Specifically given a directory of OCT-A images,
it loads a pretrained model to segment them and saves the results.
* Pretrained model weights and code to perform vessel segmentation on OCTA images.
* Demonstration of results on unseen publicly available OCT-A images including montages of multiple images and images captured with different commercial scanners.
* Demonstration of the iterative refinement effect achieved by iUNET on unseen images (please see 'segmentation_iunet' directory)
* Code for defining all models and loss functions and training as described in the paper.

## Usages-examples
* A commented example of how to use the pretrained models is provided in 'example_use_pretrained.py'.
* An example of how to define and train the models is provided in 'example_use_train.py'.
* Loss functions and network definitions can be found in 'losses.py' and 'networks.py' respectively. The 3 architectures that are implemented are
(a) UNET, (b) Stacked Hourglass Network and (c) iterative UNET or iUNET.
* A commented example of how to use the pretrained models is provided in 'example_use_pretrained.py' : specifically given a directory of OCT-A images,
it loads a pretrained model to segment them and saves the results.
* An example of how to define and train the models is provided in 'example_use_train.py'.
* Loss functions and network definitions can be found in 'losses.py' and 'networks.py' respectively.
The 3 architectures that are implemented are (a) UNET, (b) Stacked Hourglass Network and (c) iterative UNET or iUNET.

![fig](misc/figs/fig1.PNG )

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