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During model load diff generation at https://github.com/Open-MBEE/flexo-mms-layer1-service/blob/v0.1.1/src/main/kotlin/org/openmbee/flexo/mms/routes/gsp/ModelLoad.kt#L220, ?srcGraph as a var can cause neptune to stall. Example:
PREFIXES... insert { graph m-graph:Transactions { mt:diff a mms:Transaction ; mms:created "2024-01-23T02:51:56.654793433Z"^^<http://www.w3.org/2001/XMLSchema#dateTime> ; mms:serviceId "mms5-layer1-0" ; mms:requestPath "/orgs/jama/repos/msr3/branches/master/graph" ; mms:requestMethod "POST" ; mms:authMethod ?__mms_authMethod ; mms:appliedGroupId ?__mms_groupId ; # mms:requestBody "" ; mms:requestBodyContentType "text/turtle" ; mms-txn:srcGraph ?srcGraph ; mms-txn:dstGraph mor-graph:Load.53b47e3b-4b6c-4044-a03f-ee721496770f ; mms-txn:insGraph ?insGraph ; mms-txn:delGraph ?delGraph ; mms:user mu: ; mms:org mo: ; mms:repo mor: ; mms:branch morb: ; . } graph m-graph:AccessControl.Policies { m-policy:AutoDiffOwner.6b6cda4d-8528-44d0-bb6c-439fc23e88aa a mms:Policy ; mms:subject mu: ; mms:scope mord: ; mms:role mms-object:Role.AdminDiff ; . } graph ?insGraph { ?ins_s ?ins_p ?ins_o . } graph ?delGraph { ?del_s ?del_p ?del_o . } graph mor-graph:Metadata { ?diff a mms:Diff ; mms:id ?diffId ; mms:createdBy mu: ; mms:srcCommit ?srcCommit ; mms:dstCommit <https://mms5.jpl.nasa.gov/orgs/jama/repos/msr3/commits/53b47e3b-4b6c-4044-a03f-ee721496770f> ; mms:insGraph ?insGraph ; mms:delGraph ?delGraph ; . } } where { graph mor-graph:Metadata { # select the latest commit from the current named ref mor-branch:master mms:commit ?srcCommit . # get the latest snapshot associated with the source commit ?srcCommit ^mms:commit/mms:snapshot ?srcSnapshot . { # prefer the model snapshot ?srcSnapshot a mms:Model ; mms:graph ?srcGraph . } union { # settle for staging... ?srcSnapshot a mms:Staging ; mms:graph ?srcGraph . # ...if model is not available filter not exists { ?srcCommit ^mms:commit/mms:snapshot/a mms:Model . } } } bind( sha256( concat(str(<https://mms5.jpl.nasa.gov/orgs/jama/repos/msr3/commits/53b47e3b-4b6c-4044-a03f-ee721496770f>), "\n", str(?srcCommit)) ) as ?diffId ) bind( iri( concat(str(<https://mms5.jpl.nasa.gov/orgs/jama/repos/msr3/commits/53b47e3b-4b6c-4044-a03f-ee721496770f>), "/diffs/", ?diffId) ) as ?diff ) bind( iri( concat(str(mor-graph:), "Diff.Ins.", ?diffId) ) as ?insGraph ) bind( iri( concat(str(mor-graph:), "Diff.Del.", ?diffId) ) as ?delGraph ) { # delete every triple from the source graph... graph ?srcGraph { ?del_s ?del_p ?del_o . } # ... that isn't in the destination graph filter not exists { graph mor-graph:Load.53b47e3b-4b6c-4044-a03f-ee721496770f { ?del_s ?del_p ?del_o . } } } union { # insert every triple from the destination graph... graph mor-graph:Load.53b47e3b-4b6c-4044-a03f-ee721496770f { ?ins_s ?ins_p ?ins_o . } # ... that isn't in the source graph filter not exists { graph ?srcGraph { ?ins_s ?ins_p ?ins_o . } } } union {} }
This can cause Neptune to think for 30 min and times out
Replacing ?srcGraph with a definite graph lets the update finish in under 2 minutes
I think we'll have to do something similar to model query where the srcGraph is queried first.
The text was updated successfully, but these errors were encountered:
blake-regalia
Successfully merging a pull request may close this issue.
During model load diff generation at https://github.com/Open-MBEE/flexo-mms-layer1-service/blob/v0.1.1/src/main/kotlin/org/openmbee/flexo/mms/routes/gsp/ModelLoad.kt#L220, ?srcGraph as a var can cause neptune to stall.
Example:
This can cause Neptune to think for 30 min and times out
Replacing ?srcGraph with a definite graph lets the update finish in under 2 minutes
I think we'll have to do something similar to model query where the srcGraph is queried first.
The text was updated successfully, but these errors were encountered: