Add `ExpressionTreeForge.extract_element_functions` in parse-function.jl #181

paraynaud · 2024-08-30T15:43:39Z

By adding ExpressionTreeForge. to extract_element_functions I got the tests running locally.

However, I am not sure about the purpose of the current tests.
If I understand correctly, each test using isnls checks if the result detect_nls is equal to what is informed by is_nls

is_nls = meta[meta.name .== problems_names[index], :objtype][1] == :least_squares

I took a look at the results, here is a summary:

problem 25 (NZF1) is recognized as a least square problem by detect_nls.
The ADNLPModel is a sum of squared terms.
Nonetheless, the test fails for this one since is_nls returns false;
the same case happens for the problem 43 avions2;
however, the 48-th problem bennett5 is unsupported for now.
An Error is generated from get_expression_tree().
The try ... catch part of the test loop handles it well (by preventing the test is_nls == detect_nls to happen).

Out of 50 problems, 49 are supported, and two of them are least squares problems (producing errors in tests).

Checklist

I am following the contributing guidelines
Tests are passing

github-actions · 2024-08-30T15:49:43Z

Benchmark result

Judge result

Benchmark Report for /home/runner/work/JSOSuite.jl/JSOSuite.jl

Job Properties

Time of benchmarks:
- Target: 30 Aug 2024 - 15:48
- Baseline: 30 Aug 2024 - 15:49
Package commits:
- Target: 3564d5
- Baseline: 9fd0e4
Julia commits:
- Target: 6f3fdf
- Baseline: 6f3fdf
Julia command flags:
- Target: None
- Baseline: None
Environment variables:
- Target: None
- Baseline: None

Results

A ratio greater than 1.0 denotes a possible regression (marked with ❌), while a ratio less
than 1.0 denotes a possible improvement (marked with ✅). Only significant results - results
that indicate possible regressions or improvements - are shown below (thus, an empty table means that all
benchmark results remained invariant between builds).

ID	time ratio	memory ratio

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

["solvers"]

Julia versioninfo

Target

Julia Version 1.10.5
Commit 6f3fdf7b362 (2024-08-27 14:19 UTC)
Build Info:
  Official https://julialang.org/ release
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.4 LTS
  uname: Linux 6.5.0-1025-azure #26~22.04.1-Ubuntu SMP Thu Jul 11 22:33:04 UTC 2024 x86_64 x86_64
  CPU: AMD EPYC 7763 64-Core Processor: 
              speed         user         nice          sys         idle          irq
       #1  2445 MHz       1496 s          0 s        139 s       3046 s          0 s
       #2  2445 MHz       1470 s          0 s        119 s       3097 s          0 s
       #3  3272 MHz       1473 s          0 s        117 s       3102 s          0 s
       #4  3242 MHz       2318 s          0 s        141 s       2231 s          0 s
  Memory: 15.606491088867188 GB (13720.58203125 MB free)
  Uptime: 471.72 sec
  Load Avg:  1.92  1.69  0.79
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-15.0.7 (ORCJIT, znver3)
Threads: 1 default, 0 interactive, 1 GC (on 4 virtual cores)

Baseline

Julia Version 1.10.5
Commit 6f3fdf7b362 (2024-08-27 14:19 UTC)
Build Info:
  Official https://julialang.org/ release
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.4 LTS
  uname: Linux 6.5.0-1025-azure #26~22.04.1-Ubuntu SMP Thu Jul 11 22:33:04 UTC 2024 x86_64 x86_64
  CPU: AMD EPYC 7763 64-Core Processor: 
              speed         user         nice          sys         idle          irq
       #1  2445 MHz       1632 s          0 s        147 s       3433 s          0 s
       #2  2746 MHz       1592 s          0 s        128 s       3497 s          0 s
       #3  2445 MHz       1626 s          0 s        129 s       3468 s          0 s
       #4  3241 MHz       2445 s          0 s        150 s       2626 s          0 s
  Memory: 15.606491088867188 GB (13748.58984375 MB free)
  Uptime: 524.88 sec
  Load Avg:  1.4  1.58  0.81
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-15.0.7 (ORCJIT, znver3)
Threads: 1 default, 0 interactive, 1 GC (on 4 virtual cores)

Target result

Benchmark Report for /home/runner/work/JSOSuite.jl/JSOSuite.jl

Job Properties

Time of benchmark: 30 Aug 2024 - 15:48
Package commit: 3564d5
Julia commit: 6f3fdf
Julia command flags: None
Environment variables: None

Results

Below is a table of this job's results, obtained by running the benchmarks.
The values listed in the ID column have the structure [parent_group, child_group, ..., key], and can be used to
index into the BaseBenchmarks suite to retrieve the corresponding benchmarks.
The percentages accompanying time and memory values in the below table are noise tolerances. The "true"
time/memory value for a given benchmark is expected to fall within this percentage of the reported value.
An empty cell means that the value was zero.

ID	time	memory	allocations
`["solvers", "LBFGS"]`	46.346 μs (5%)	21.84 KiB (1%)	576
`["solvers", "Percival"]`	63.218 μs (5%)	28.12 KiB (1%)	385
`["solvers", "R2"]`	483.971 μs (5%)	234.58 KiB (1%)	10848
`["solvers", "TRON"]`	60.573 μs (5%)	58.62 KiB (1%)	571
`["solvers", "TRUNK"]`	39.854 μs (5%)	30.39 KiB (1%)	367

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

["solvers"]

Julia versioninfo

Julia Version 1.10.5
Commit 6f3fdf7b362 (2024-08-27 14:19 UTC)
Build Info:
  Official https://julialang.org/ release
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.4 LTS
  uname: Linux 6.5.0-1025-azure #26~22.04.1-Ubuntu SMP Thu Jul 11 22:33:04 UTC 2024 x86_64 x86_64
  CPU: AMD EPYC 7763 64-Core Processor: 
              speed         user         nice          sys         idle          irq
       #1  2445 MHz       1496 s          0 s        139 s       3046 s          0 s
       #2  2445 MHz       1470 s          0 s        119 s       3097 s          0 s
       #3  3272 MHz       1473 s          0 s        117 s       3102 s          0 s
       #4  3242 MHz       2318 s          0 s        141 s       2231 s          0 s
  Memory: 15.606491088867188 GB (13720.58203125 MB free)
  Uptime: 471.72 sec
  Load Avg:  1.92  1.69  0.79
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-15.0.7 (ORCJIT, znver3)
Threads: 1 default, 0 interactive, 1 GC (on 4 virtual cores)

Baseline result

Benchmark Report for /home/runner/work/JSOSuite.jl/JSOSuite.jl

Job Properties

Time of benchmark: 30 Aug 2024 - 15:49
Package commit: 9fd0e4
Julia commit: 6f3fdf
Julia command flags: None
Environment variables: None

Results

Below is a table of this job's results, obtained by running the benchmarks.
The values listed in the ID column have the structure [parent_group, child_group, ..., key], and can be used to
index into the BaseBenchmarks suite to retrieve the corresponding benchmarks.
The percentages accompanying time and memory values in the below table are noise tolerances. The "true"
time/memory value for a given benchmark is expected to fall within this percentage of the reported value.
An empty cell means that the value was zero.

ID	time	memory	allocations
`["solvers", "LBFGS"]`	45.875 μs (5%)	21.84 KiB (1%)	576
`["solvers", "Percival"]`	63.398 μs (5%)	28.12 KiB (1%)	385
`["solvers", "R2"]`	482.007 μs (5%)	234.58 KiB (1%)	10848
`["solvers", "TRON"]`	60.593 μs (5%)	58.62 KiB (1%)	571
`["solvers", "TRUNK"]`	39.213 μs (5%)	30.39 KiB (1%)	367

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

["solvers"]

Julia versioninfo

Julia Version 1.10.5
Commit 6f3fdf7b362 (2024-08-27 14:19 UTC)
Build Info:
  Official https://julialang.org/ release
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.4 LTS
  uname: Linux 6.5.0-1025-azure #26~22.04.1-Ubuntu SMP Thu Jul 11 22:33:04 UTC 2024 x86_64 x86_64
  CPU: AMD EPYC 7763 64-Core Processor: 
              speed         user         nice          sys         idle          irq
       #1  2445 MHz       1632 s          0 s        147 s       3433 s          0 s
       #2  2746 MHz       1592 s          0 s        128 s       3497 s          0 s
       #3  2445 MHz       1626 s          0 s        129 s       3468 s          0 s
       #4  3241 MHz       2445 s          0 s        150 s       2626 s          0 s
  Memory: 15.606491088867188 GB (13748.58984375 MB free)
  Uptime: 524.88 sec
  Load Avg:  1.4  1.58  0.81
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-15.0.7 (ORCJIT, znver3)
Threads: 1 default, 0 interactive, 1 GC (on 4 virtual cores)

Runtime information

Runtime Info
BLAS #threads	2
`BLAS.vendor()`	`lbt`
`Sys.CPU_THREADS`	4

lscpu output:

Architecture:                       x86_64
CPU op-mode(s):                     32-bit, 64-bit
Address sizes:                      48 bits physical, 48 bits virtual
Byte Order:                         Little Endian
CPU(s):                             4
On-line CPU(s) list:                0-3
Vendor ID:                          AuthenticAMD
Model name:                         AMD EPYC 7763 64-Core Processor
CPU family:                         25
Model:                              1
Thread(s) per core:                 2
Core(s) per socket:                 2
Socket(s):                          1
Stepping:                           1
BogoMIPS:                           4890.85
Flags:                              fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ht syscall nx mmxext fxsr_opt pdpe1gb rdtscp lm constant_tsc rep_good nopl tsc_reliable nonstop_tsc cpuid extd_apicid aperfmperf pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 movbe popcnt aes xsave avx f16c rdrand hypervisor lahf_lm cmp_legacy svm cr8_legacy abm sse4a misalignsse 3dnowprefetch osvw topoext invpcid_single vmmcall fsgsbase bmi1 avx2 smep bmi2 erms invpcid rdseed adx smap clflushopt clwb sha_ni xsaveopt xsavec xgetbv1 xsaves clzero xsaveerptr rdpru arat npt nrip_save tsc_scale vmcb_clean flushbyasid decodeassists pausefilter pfthreshold v_vmsave_vmload umip vaes vpclmulqdq rdpid fsrm
Virtualization:                     AMD-V
Hypervisor vendor:                  Microsoft
Virtualization type:                full
L1d cache:                          64 KiB (2 instances)
L1i cache:                          64 KiB (2 instances)
L2 cache:                           1 MiB (2 instances)
L3 cache:                           32 MiB (1 instance)
NUMA node(s):                       1
NUMA node0 CPU(s):                  0-3
Vulnerability Gather data sampling: Not affected
Vulnerability Itlb multihit:        Not affected
Vulnerability L1tf:                 Not affected
Vulnerability Mds:                  Not affected
Vulnerability Meltdown:             Not affected
Vulnerability Mmio stale data:      Not affected
Vulnerability Retbleed:             Not affected
Vulnerability Spec rstack overflow: Vulnerable: Safe RET, no microcode
Vulnerability Spec store bypass:    Vulnerable
Vulnerability Spectre v1:           Mitigation; usercopy/swapgs barriers and __user pointer sanitization
Vulnerability Spectre v2:           Mitigation; Retpolines; STIBP disabled; RSB filling; PBRSB-eIBRS Not affected; BHI Not affected
Vulnerability Srbds:                Not affected
Vulnerability Tsx async abort:      Not affected

Cpu Property	Value
Brand	AMD EPYC 7763 64-Core Processor
Vendor	:AMD
Architecture	:Unknown
Model	Family: 0xaf, Model: 0x01, Stepping: 0x01, Type: 0x00
Cores	16 physical cores, 16 logical cores (on executing CPU)
	No Hyperthreading hardware capability detected
Clock Frequencies	Not supported by CPU
Data Cache	Level 1:3 : (32, 512, 32768) kbytes
	64 byte cache line size
Address Size	48 bits virtual, 48 bits physical
SIMD	256 bit = 32 byte max. SIMD vector size
Time Stamp Counter	TSC is accessible via `rdtsc`
	TSC runs at constant rate (invariant from clock frequency)
Perf. Monitoring	Performance Monitoring Counters (PMC) are not supported
Hypervisor	Yes, Microsoft

Allow all tests to run, i.e. does not stop at the first error.

github-actions · 2024-08-30T16:01:41Z

Benchmark result

Judge result

Benchmark Report for /home/runner/work/JSOSuite.jl/JSOSuite.jl

Job Properties

Time of benchmarks:
- Target: 30 Aug 2024 - 16:00
- Baseline: 30 Aug 2024 - 16:01
Package commits:
- Target: d87f34
- Baseline: 9fd0e4
Julia commits:
- Target: 6f3fdf
- Baseline: 6f3fdf
Julia command flags:
- Target: None
- Baseline: None
Environment variables:
- Target: None
- Baseline: None

Results

A ratio greater than 1.0 denotes a possible regression (marked with ❌), while a ratio less
than 1.0 denotes a possible improvement (marked with ✅). Only significant results - results
that indicate possible regressions or improvements - are shown below (thus, an empty table means that all
benchmark results remained invariant between builds).

ID	time ratio	memory ratio
`["solvers", "LBFGS"]`	0.89 (5%) ✅	1.00 (1%)

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

["solvers"]

Julia versioninfo

Target

Julia Version 1.10.5
Commit 6f3fdf7b362 (2024-08-27 14:19 UTC)
Build Info:
  Official https://julialang.org/ release
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.4 LTS
  uname: Linux 6.5.0-1025-azure #26~22.04.1-Ubuntu SMP Thu Jul 11 22:33:04 UTC 2024 x86_64 x86_64
  CPU: AMD EPYC 7763 64-Core Processor: 
              speed         user         nice          sys         idle          irq
       #1  2445 MHz       1654 s          0 s        130 s       2636 s          0 s
       #2  3244 MHz       1910 s          0 s        134 s       2376 s          0 s
       #3  3191 MHz       1782 s          0 s        119 s       2514 s          0 s
       #4  3216 MHz       1664 s          0 s        139 s       2622 s          0 s
  Memory: 15.606491088867188 GB (13742.140625 MB free)
  Uptime: 444.61 sec
  Load Avg:  1.66  1.6  0.75
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-15.0.7 (ORCJIT, znver3)
Threads: 1 default, 0 interactive, 1 GC (on 4 virtual cores)

Baseline

Julia Version 1.10.5
Commit 6f3fdf7b362 (2024-08-27 14:19 UTC)
Build Info:
  Official https://julialang.org/ release
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.4 LTS
  uname: Linux 6.5.0-1025-azure #26~22.04.1-Ubuntu SMP Thu Jul 11 22:33:04 UTC 2024 x86_64 x86_64
  CPU: AMD EPYC 7763 64-Core Processor: 
              speed         user         nice          sys         idle          irq
       #1  3283 MHz       1665 s          0 s        137 s       3174 s          0 s
       #2  3243 MHz       1979 s          0 s        144 s       2853 s          0 s
       #3  2445 MHz       2164 s          0 s        129 s       2677 s          0 s
       #4  3238 MHz       1765 s          0 s        144 s       3072 s          0 s
  Memory: 15.606491088867188 GB (13818.0 MB free)
  Uptime: 500.31 sec
  Load Avg:  1.3  1.51  0.77
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-15.0.7 (ORCJIT, znver3)
Threads: 1 default, 0 interactive, 1 GC (on 4 virtual cores)

Target result

Benchmark Report for /home/runner/work/JSOSuite.jl/JSOSuite.jl

Job Properties

Time of benchmark: 30 Aug 2024 - 16:0
Package commit: d87f34
Julia commit: 6f3fdf
Julia command flags: None
Environment variables: None

Results

Below is a table of this job's results, obtained by running the benchmarks.
The values listed in the ID column have the structure [parent_group, child_group, ..., key], and can be used to
index into the BaseBenchmarks suite to retrieve the corresponding benchmarks.
The percentages accompanying time and memory values in the below table are noise tolerances. The "true"
time/memory value for a given benchmark is expected to fall within this percentage of the reported value.
An empty cell means that the value was zero.

ID	time	memory	allocations
`["solvers", "LBFGS"]`	45.655 μs (5%)	21.84 KiB (1%)	576
`["solvers", "Percival"]`	62.998 μs (5%)	28.12 KiB (1%)	385
`["solvers", "R2"]`	479.553 μs (5%)	234.58 KiB (1%)	10848
`["solvers", "TRON"]`	60.783 μs (5%)	58.62 KiB (1%)	571
`["solvers", "TRUNK"]`	40.285 μs (5%)	30.39 KiB (1%)	367

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

["solvers"]

Julia versioninfo

Julia Version 1.10.5
Commit 6f3fdf7b362 (2024-08-27 14:19 UTC)
Build Info:
  Official https://julialang.org/ release
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.4 LTS
  uname: Linux 6.5.0-1025-azure #26~22.04.1-Ubuntu SMP Thu Jul 11 22:33:04 UTC 2024 x86_64 x86_64
  CPU: AMD EPYC 7763 64-Core Processor: 
              speed         user         nice          sys         idle          irq
       #1  2445 MHz       1654 s          0 s        130 s       2636 s          0 s
       #2  3244 MHz       1910 s          0 s        134 s       2376 s          0 s
       #3  3191 MHz       1782 s          0 s        119 s       2514 s          0 s
       #4  3216 MHz       1664 s          0 s        139 s       2622 s          0 s
  Memory: 15.606491088867188 GB (13742.140625 MB free)
  Uptime: 444.61 sec
  Load Avg:  1.66  1.6  0.75
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-15.0.7 (ORCJIT, znver3)
Threads: 1 default, 0 interactive, 1 GC (on 4 virtual cores)

Baseline result

Benchmark Report for /home/runner/work/JSOSuite.jl/JSOSuite.jl

Job Properties

Time of benchmark: 30 Aug 2024 - 16:1
Package commit: 9fd0e4
Julia commit: 6f3fdf
Julia command flags: None
Environment variables: None

Results

Below is a table of this job's results, obtained by running the benchmarks.
The values listed in the ID column have the structure [parent_group, child_group, ..., key], and can be used to
index into the BaseBenchmarks suite to retrieve the corresponding benchmarks.
The percentages accompanying time and memory values in the below table are noise tolerances. The "true"
time/memory value for a given benchmark is expected to fall within this percentage of the reported value.
An empty cell means that the value was zero.

ID	time	memory	allocations
`["solvers", "LBFGS"]`	51.336 μs (5%)	21.84 KiB (1%)	576
`["solvers", "Percival"]`	62.276 μs (5%)	28.12 KiB (1%)	385
`["solvers", "R2"]`	492.587 μs (5%)	234.58 KiB (1%)	10848
`["solvers", "TRON"]`	60.803 μs (5%)	58.62 KiB (1%)	571
`["solvers", "TRUNK"]`	39.193 μs (5%)	30.39 KiB (1%)	367

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

["solvers"]

Julia versioninfo

Julia Version 1.10.5
Commit 6f3fdf7b362 (2024-08-27 14:19 UTC)
Build Info:
  Official https://julialang.org/ release
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.4 LTS
  uname: Linux 6.5.0-1025-azure #26~22.04.1-Ubuntu SMP Thu Jul 11 22:33:04 UTC 2024 x86_64 x86_64
  CPU: AMD EPYC 7763 64-Core Processor: 
              speed         user         nice          sys         idle          irq
       #1  3283 MHz       1665 s          0 s        137 s       3174 s          0 s
       #2  3243 MHz       1979 s          0 s        144 s       2853 s          0 s
       #3  2445 MHz       2164 s          0 s        129 s       2677 s          0 s
       #4  3238 MHz       1765 s          0 s        144 s       3072 s          0 s
  Memory: 15.606491088867188 GB (13818.0 MB free)
  Uptime: 500.31 sec
  Load Avg:  1.3  1.51  0.77
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-15.0.7 (ORCJIT, znver3)
Threads: 1 default, 0 interactive, 1 GC (on 4 virtual cores)

Runtime information

Runtime Info
BLAS #threads	2
`BLAS.vendor()`	`lbt`
`Sys.CPU_THREADS`	4

lscpu output:

Architecture:                       x86_64
CPU op-mode(s):                     32-bit, 64-bit
Address sizes:                      48 bits physical, 48 bits virtual
Byte Order:                         Little Endian
CPU(s):                             4
On-line CPU(s) list:                0-3
Vendor ID:                          AuthenticAMD
Model name:                         AMD EPYC 7763 64-Core Processor
CPU family:                         25
Model:                              1
Thread(s) per core:                 2
Core(s) per socket:                 2
Socket(s):                          1
Stepping:                           1
BogoMIPS:                           4890.85
Flags:                              fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ht syscall nx mmxext fxsr_opt pdpe1gb rdtscp lm constant_tsc rep_good nopl tsc_reliable nonstop_tsc cpuid extd_apicid aperfmperf pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 movbe popcnt aes xsave avx f16c rdrand hypervisor lahf_lm cmp_legacy svm cr8_legacy abm sse4a misalignsse 3dnowprefetch osvw topoext invpcid_single vmmcall fsgsbase bmi1 avx2 smep bmi2 erms invpcid rdseed adx smap clflushopt clwb sha_ni xsaveopt xsavec xgetbv1 xsaves clzero xsaveerptr rdpru arat npt nrip_save tsc_scale vmcb_clean flushbyasid decodeassists pausefilter pfthreshold v_vmsave_vmload umip vaes vpclmulqdq rdpid fsrm
Virtualization:                     AMD-V
Hypervisor vendor:                  Microsoft
Virtualization type:                full
L1d cache:                          64 KiB (2 instances)
L1i cache:                          64 KiB (2 instances)
L2 cache:                           1 MiB (2 instances)
L3 cache:                           32 MiB (1 instance)
NUMA node(s):                       1
NUMA node0 CPU(s):                  0-3
Vulnerability Gather data sampling: Not affected
Vulnerability Itlb multihit:        Not affected
Vulnerability L1tf:                 Not affected
Vulnerability Mds:                  Not affected
Vulnerability Meltdown:             Not affected
Vulnerability Mmio stale data:      Not affected
Vulnerability Retbleed:             Not affected
Vulnerability Spec rstack overflow: Vulnerable: Safe RET, no microcode
Vulnerability Spec store bypass:    Vulnerable
Vulnerability Spectre v1:           Mitigation; usercopy/swapgs barriers and __user pointer sanitization
Vulnerability Spectre v2:           Mitigation; Retpolines; STIBP disabled; RSB filling; PBRSB-eIBRS Not affected; BHI Not affected
Vulnerability Srbds:                Not affected
Vulnerability Tsx async abort:      Not affected

Cpu Property	Value
Brand	AMD EPYC 7763 64-Core Processor
Vendor	:AMD
Architecture	:Unknown
Model	Family: 0xaf, Model: 0x01, Stepping: 0x01, Type: 0x00
Cores	16 physical cores, 16 logical cores (on executing CPU)
	No Hyperthreading hardware capability detected
Clock Frequencies	Not supported by CPU
Data Cache	Level 1:3 : (32, 512, 32768) kbytes
	64 byte cache line size
Address Size	48 bits virtual, 48 bits physical
SIMD	256 bit = 32 byte max. SIMD vector size
Time Stamp Counter	TSC is accessible via `rdtsc`
	TSC runs at constant rate (invariant from clock frequency)
Perf. Monitoring	Performance Monitoring Counters (PMC) are not supported
Hypervisor	Yes, Microsoft

paraynaud · 2024-08-30T16:10:21Z

ENV["JULIA_DEBUG"] = "all" must be used to get the problem names from the tests.

paraynaud · 2024-08-30T16:10:44Z

@tmigot

github-actions · 2024-09-01T12:21:36Z

Benchmark result

Judge result

Benchmark Report for /home/runner/work/JSOSuite.jl/JSOSuite.jl

Job Properties

Time of benchmarks:
- Target: 1 Sep 2024 - 12:20
- Baseline: 1 Sep 2024 - 12:21
Package commits:
- Target: 15b2bd
- Baseline: 3994b2
Julia commits:
- Target: 6f3fdf
- Baseline: 6f3fdf
Julia command flags:
- Target: None
- Baseline: None
Environment variables:
- Target: None
- Baseline: None

Results

A ratio greater than 1.0 denotes a possible regression (marked with ❌), while a ratio less
than 1.0 denotes a possible improvement (marked with ✅). Only significant results - results
that indicate possible regressions or improvements - are shown below (thus, an empty table means that all
benchmark results remained invariant between builds).

ID	time ratio	memory ratio

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

["solvers"]

Julia versioninfo

Target

Julia Version 1.10.5
Commit 6f3fdf7b362 (2024-08-27 14:19 UTC)
Build Info:
  Official https://julialang.org/ release
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.4 LTS
  uname: Linux 6.5.0-1025-azure #26~22.04.1-Ubuntu SMP Thu Jul 11 22:33:04 UTC 2024 x86_64 x86_64
  CPU: AMD EPYC 7763 64-Core Processor: 
              speed         user         nice          sys         idle          irq
       #1  3105 MHz       1741 s          0 s        149 s       5186 s          0 s
       #2  3171 MHz       1903 s          0 s        121 s       5082 s          0 s
       #3  3244 MHz       1562 s          0 s        137 s       5406 s          0 s
       #4  3243 MHz       1574 s          0 s        126 s       5410 s          0 s
  Memory: 15.606487274169922 GB (13751.75390625 MB free)
  Uptime: 713.86 sec
  Load Avg:  1.64  1.62  0.79
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-15.0.7 (ORCJIT, znver3)
Threads: 1 default, 0 interactive, 1 GC (on 4 virtual cores)

Baseline

Julia Version 1.10.5
Commit 6f3fdf7b362 (2024-08-27 14:19 UTC)
Build Info:
  Official https://julialang.org/ release
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.4 LTS
  uname: Linux 6.5.0-1025-azure #26~22.04.1-Ubuntu SMP Thu Jul 11 22:33:04 UTC 2024 x86_64 x86_64
  CPU: AMD EPYC 7763 64-Core Processor: 
              speed         user         nice          sys         idle          irq
       #1  3086 MHz       1995 s          0 s        163 s       5444 s          0 s
       #2  2445 MHz       2020 s          0 s        128 s       5485 s          0 s
       #3  3203 MHz       1635 s          0 s        144 s       5851 s          0 s
       #4  3243 MHz       1658 s          0 s        136 s       5841 s          0 s
  Memory: 15.606487274169922 GB (13799.28125 MB free)
  Uptime: 766.6 sec
  Load Avg:  1.45  1.56  0.82
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-15.0.7 (ORCJIT, znver3)
Threads: 1 default, 0 interactive, 1 GC (on 4 virtual cores)

Target result

Benchmark Report for /home/runner/work/JSOSuite.jl/JSOSuite.jl

Job Properties

Time of benchmark: 1 Sep 2024 - 12:20
Package commit: 15b2bd
Julia commit: 6f3fdf
Julia command flags: None
Environment variables: None

Results

Below is a table of this job's results, obtained by running the benchmarks.
The values listed in the ID column have the structure [parent_group, child_group, ..., key], and can be used to
index into the BaseBenchmarks suite to retrieve the corresponding benchmarks.
The percentages accompanying time and memory values in the below table are noise tolerances. The "true"
time/memory value for a given benchmark is expected to fall within this percentage of the reported value.
An empty cell means that the value was zero.

ID	time	memory	allocations
`["solvers", "LBFGS"]`	45.566 μs (5%)	21.84 KiB (1%)	576
`["solvers", "Percival"]`	64.040 μs (5%)	28.12 KiB (1%)	385
`["solvers", "R2"]`	484.678 μs (5%)	234.58 KiB (1%)	10848
`["solvers", "TRON"]`	59.481 μs (5%)	58.62 KiB (1%)	571
`["solvers", "TRUNK"]`	40.316 μs (5%)	30.39 KiB (1%)	367

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

["solvers"]

Julia versioninfo

Julia Version 1.10.5
Commit 6f3fdf7b362 (2024-08-27 14:19 UTC)
Build Info:
  Official https://julialang.org/ release
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.4 LTS
  uname: Linux 6.5.0-1025-azure #26~22.04.1-Ubuntu SMP Thu Jul 11 22:33:04 UTC 2024 x86_64 x86_64
  CPU: AMD EPYC 7763 64-Core Processor: 
              speed         user         nice          sys         idle          irq
       #1  3105 MHz       1741 s          0 s        149 s       5186 s          0 s
       #2  3171 MHz       1903 s          0 s        121 s       5082 s          0 s
       #3  3244 MHz       1562 s          0 s        137 s       5406 s          0 s
       #4  3243 MHz       1574 s          0 s        126 s       5410 s          0 s
  Memory: 15.606487274169922 GB (13751.75390625 MB free)
  Uptime: 713.86 sec
  Load Avg:  1.64  1.62  0.79
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-15.0.7 (ORCJIT, znver3)
Threads: 1 default, 0 interactive, 1 GC (on 4 virtual cores)

Baseline result

Benchmark Report for /home/runner/work/JSOSuite.jl/JSOSuite.jl

Job Properties

Time of benchmark: 1 Sep 2024 - 12:21
Package commit: 3994b2
Julia commit: 6f3fdf
Julia command flags: None
Environment variables: None

Results

Below is a table of this job's results, obtained by running the benchmarks.
The values listed in the ID column have the structure [parent_group, child_group, ..., key], and can be used to
index into the BaseBenchmarks suite to retrieve the corresponding benchmarks.
The percentages accompanying time and memory values in the below table are noise tolerances. The "true"
time/memory value for a given benchmark is expected to fall within this percentage of the reported value.
An empty cell means that the value was zero.

ID	time	memory	allocations
`["solvers", "LBFGS"]`	45.134 μs (5%)	21.84 KiB (1%)	576
`["solvers", "Percival"]`	61.255 μs (5%)	28.12 KiB (1%)	385
`["solvers", "R2"]`	473.947 μs (5%)	234.58 KiB (1%)	10848
`["solvers", "TRON"]`	60.363 μs (5%)	58.62 KiB (1%)	571
`["solvers", "TRUNK"]`	39.534 μs (5%)	30.39 KiB (1%)	367

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

["solvers"]

Julia versioninfo

Julia Version 1.10.5
Commit 6f3fdf7b362 (2024-08-27 14:19 UTC)
Build Info:
  Official https://julialang.org/ release
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.4 LTS
  uname: Linux 6.5.0-1025-azure #26~22.04.1-Ubuntu SMP Thu Jul 11 22:33:04 UTC 2024 x86_64 x86_64
  CPU: AMD EPYC 7763 64-Core Processor: 
              speed         user         nice          sys         idle          irq
       #1  3086 MHz       1995 s          0 s        163 s       5444 s          0 s
       #2  2445 MHz       2020 s          0 s        128 s       5485 s          0 s
       #3  3203 MHz       1635 s          0 s        144 s       5851 s          0 s
       #4  3243 MHz       1658 s          0 s        136 s       5841 s          0 s
  Memory: 15.606487274169922 GB (13799.28125 MB free)
  Uptime: 766.6 sec
  Load Avg:  1.45  1.56  0.82
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-15.0.7 (ORCJIT, znver3)
Threads: 1 default, 0 interactive, 1 GC (on 4 virtual cores)

Runtime information

Runtime Info
BLAS #threads	2
`BLAS.vendor()`	`lbt`
`Sys.CPU_THREADS`	4

lscpu output:

Architecture:                       x86_64
CPU op-mode(s):                     32-bit, 64-bit
Address sizes:                      48 bits physical, 48 bits virtual
Byte Order:                         Little Endian
CPU(s):                             4
On-line CPU(s) list:                0-3
Vendor ID:                          AuthenticAMD
Model name:                         AMD EPYC 7763 64-Core Processor
CPU family:                         25
Model:                              1
Thread(s) per core:                 2
Core(s) per socket:                 2
Socket(s):                          1
Stepping:                           1
BogoMIPS:                           4890.85
Flags:                              fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ht syscall nx mmxext fxsr_opt pdpe1gb rdtscp lm constant_tsc rep_good nopl tsc_reliable nonstop_tsc cpuid extd_apicid aperfmperf pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 movbe popcnt aes xsave avx f16c rdrand hypervisor lahf_lm cmp_legacy svm cr8_legacy abm sse4a misalignsse 3dnowprefetch osvw topoext invpcid_single vmmcall fsgsbase bmi1 avx2 smep bmi2 erms invpcid rdseed adx smap clflushopt clwb sha_ni xsaveopt xsavec xgetbv1 xsaves clzero xsaveerptr rdpru arat npt nrip_save tsc_scale vmcb_clean flushbyasid decodeassists pausefilter pfthreshold v_vmsave_vmload umip vaes vpclmulqdq rdpid fsrm
Virtualization:                     AMD-V
Hypervisor vendor:                  Microsoft
Virtualization type:                full
L1d cache:                          64 KiB (2 instances)
L1i cache:                          64 KiB (2 instances)
L2 cache:                           1 MiB (2 instances)
L3 cache:                           32 MiB (1 instance)
NUMA node(s):                       1
NUMA node0 CPU(s):                  0-3
Vulnerability Gather data sampling: Not affected
Vulnerability Itlb multihit:        Not affected
Vulnerability L1tf:                 Not affected
Vulnerability Mds:                  Not affected
Vulnerability Meltdown:             Not affected
Vulnerability Mmio stale data:      Not affected
Vulnerability Retbleed:             Not affected
Vulnerability Spec rstack overflow: Vulnerable: Safe RET, no microcode
Vulnerability Spec store bypass:    Vulnerable
Vulnerability Spectre v1:           Mitigation; usercopy/swapgs barriers and __user pointer sanitization
Vulnerability Spectre v2:           Mitigation; Retpolines; STIBP disabled; RSB filling; PBRSB-eIBRS Not affected; BHI Not affected
Vulnerability Srbds:                Not affected
Vulnerability Tsx async abort:      Not affected

Cpu Property	Value
Brand	AMD EPYC 7763 64-Core Processor
Vendor	:AMD
Architecture	:Unknown
Model	Family: 0xaf, Model: 0x01, Stepping: 0x01, Type: 0x00
Cores	16 physical cores, 16 logical cores (on executing CPU)
	No Hyperthreading hardware capability detected
Clock Frequencies	Not supported by CPU
Data Cache	Level 1:3 : (32, 512, 32768) kbytes
	64 byte cache line size
Address Size	48 bits virtual, 48 bits physical
SIMD	256 bit = 32 byte max. SIMD vector size
Time Stamp Counter	TSC is accessible via `rdtsc`
	TSC runs at constant rate (invariant from clock frequency)
Perf. Monitoring	Performance Monitoring Counters (PMC) are not supported
Hypervisor	Yes, Microsoft

tmigot

Thanks @paraynaud ! That looks great. I updated OptimizationProblems avion2 and NZF1 to class them as NLS.

….jl (#181) * Add `ExpressionTreeForge.extract_element_functions` in parse-function.jl * Edit parse-function-test.jl Allow all tests to run, i.e. does not stop at the first error.

* Detect NLS pattern * Update src/parse-functions.jl Co-authored-by: Paul Raynaud <[email protected]> * Add `ExpressionTreeForge.extract_element_functions` in parse-function.jl (#181) * Add `ExpressionTreeForge.extract_element_functions` in parse-function.jl * Edit parse-function-test.jl Allow all tests to run, i.e. does not stop at the first error. * fix docstring * apply linter --------- Co-authored-by: Paul Raynaud <[email protected]>

Add ExpressionTreeForge.extract_element_functions in parse-function.jl

fd0bbe3

Edit parse-function-test.jl

c77e589

Allow all tests to run, i.e. does not stop at the first error.

tmigot mentioned this pull request Sep 1, 2024

Classify avion2 and NZF1 as NLS JuliaSmoothOptimizers/OptimizationProblems.jl#340

Merged

tmigot closed this Sep 1, 2024

tmigot reopened this Sep 1, 2024

tmigot approved these changes Sep 1, 2024

View reviewed changes

tmigot merged commit 2085179 into parse-julia-fun Sep 1, 2024
12 of 23 checks passed

tmigot deleted the parse-julia-fun-pr-edit branch September 1, 2024 12:37

Add ExpressionTreeForge.extract_element_functions in parse-function.jl #181

Add ExpressionTreeForge.extract_element_functions in parse-function.jl #181

Conversation

paraynaud commented Aug 30, 2024

Checklist

github-actions bot commented Aug 30, 2024

Judge result

Benchmark Report for /home/runner/work/JSOSuite.jl/JSOSuite.jl

Job Properties

Results

Benchmark Group List

Julia versioninfo

Target

Baseline

Target result

Benchmark Report for /home/runner/work/JSOSuite.jl/JSOSuite.jl

Job Properties

Results

Benchmark Group List

Julia versioninfo

Baseline result

Benchmark Report for /home/runner/work/JSOSuite.jl/JSOSuite.jl

Job Properties

Results

Benchmark Group List

Julia versioninfo

Runtime information

github-actions bot commented Aug 30, 2024

Judge result

Benchmark Report for /home/runner/work/JSOSuite.jl/JSOSuite.jl

Job Properties

Results

Benchmark Group List

Julia versioninfo

Target

Baseline

Target result

Benchmark Report for /home/runner/work/JSOSuite.jl/JSOSuite.jl

Job Properties

Results

Benchmark Group List

Julia versioninfo

Baseline result

Benchmark Report for /home/runner/work/JSOSuite.jl/JSOSuite.jl

Job Properties

Results

Benchmark Group List

Julia versioninfo

Runtime information

paraynaud commented Aug 30, 2024

paraynaud commented Aug 30, 2024

github-actions bot commented Sep 1, 2024

Judge result

Benchmark Report for /home/runner/work/JSOSuite.jl/JSOSuite.jl

Job Properties

Results

Benchmark Group List

Julia versioninfo

Target

Baseline

Target result

Benchmark Report for /home/runner/work/JSOSuite.jl/JSOSuite.jl

Job Properties

Results

Benchmark Group List

Julia versioninfo

Baseline result

Benchmark Report for /home/runner/work/JSOSuite.jl/JSOSuite.jl

Job Properties

Results

Benchmark Group List

Julia versioninfo

Runtime information

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Add `ExpressionTreeForge.extract_element_functions` in parse-function.jl #181

Add `ExpressionTreeForge.extract_element_functions` in parse-function.jl #181