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Ensembl Project

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  1. ensembl-vep ensembl-vep Public

    The Ensembl Variant Effect Predictor predicts the functional effects of genomic variants

    Perl 472 157

  2. WiggleTools WiggleTools Public

    Basic operations on the space of numerical functions defined on the genome using lazy evaluators for flexibility and efficiency

    C 147 26

  3. VEP_plugins VEP_plugins Public

    Plugins for the Ensembl Variant Effect Predictor (VEP)

    Perl 144 120

  4. ensembl-rest ensembl-rest Public

    Language agnostic RESTful data access to Ensembl data over HTTP

    Perl 143 63

  5. ensembl ensembl Public

    The Ensembl Core Perl API and SQL schema

    Perl 81 77

  6. ensembl-pipeline ensembl-pipeline Public

    *DEPRECATED* Job management for the Ensembl Genebuild pipeline

    Perl 61 29

Repositories

Showing 10 of 211 repositories
  • ensembl-client Public

    Ensembl beta client

    Ensembl/ensembl-client’s past year of commit activity
    TypeScript 13 Apache-2.0 4 0 1 Updated Mar 8, 2025
  • ensembl-analysis Public

    Modules to interface with tools used in Ensembl Gene Annotation Process and scripts to run pipelines

    Ensembl/ensembl-analysis’s past year of commit activity
    Perl 18 Apache-2.0 35 0 0 Updated Mar 7, 2025
  • ensembl-production Public

    Ensembl Production code

    Ensembl/ensembl-production’s past year of commit activity
    Perl 11 Apache-2.0 42 0 7 Updated Mar 7, 2025
  • ensembl-metadata-api Public

    ensembl_genome_metadata schema SQLAlchemy ORM layer

    Ensembl/ensembl-metadata-api’s past year of commit activity
    Python 1 Apache-2.0 2 0 1 Updated Mar 7, 2025
  • public-plugins Public

    Plugins for an Ensembl website

    Ensembl/public-plugins’s past year of commit activity
    JavaScript 9 Apache-2.0 46 0 2 Updated Mar 7, 2025
  • ensembl-compara Public

    The Ensembl Compara Perl API and SQL schema

    Ensembl/ensembl-compara’s past year of commit activity
    Perl 52 Apache-2.0 69 0 6 Updated Mar 7, 2025
  • Ensembl/ensembl-genes-metadata’s past year of commit activity
    Perl 1 Apache-2.0 0 2 1 Updated Mar 6, 2025
  • plant-scripts Public

    Scripting analyses of genomes in Ensembl Plants

    Ensembl/plant-scripts’s past year of commit activity
    Perl 39 Apache-2.0 9 1 0 Updated Mar 6, 2025
  • ensembl-metadata Public

    API for storing and querying metadata from Ensembl and EnsemblGenomes

    Ensembl/ensembl-metadata’s past year of commit activity
    Perl 5 Apache-2.0 5 0 1 Updated Mar 6, 2025
  • ensembl-web-metadata-api Public

    Metadata API for beta.ensembl.org

    Ensembl/ensembl-web-metadata-api’s past year of commit activity
    Python 0 Apache-2.0 0 0 2 Updated Mar 6, 2025