submit to Zenodo

[VladimirAlexiev]

Iovka Boneva at univ-lille.fr (@iovka) and D Tomaszuk at uwb.edu.pl (@domel ):

I am contacting you with a specific request regarding the awesome-semantic-shape GitHub repository, to which you have been contributing.
We will be publishing a scientific paper on communalities and differences between graph schema languages (SHACL, ShEx and PG-Schema) and would like to include in it a reference to an up-to-date list of known implementations of these languages, as the one available on that repo. We were wondering whether the community behind the repo would accept to link it to Zenodo, so that it would be attributed a DOI, archived, and made easier to cite in academic works.

Apparently the procedure for making the link is very light.
https://docs.github.com/en/repositories/archiving-a-github-repository/referencing-and-citing-content

Could you please tell me whether as a community you are willing to make this link, and if necessary point me to the person who can effectively create the link.

[VladimirAlexiev]

• I have https://zenodo.org/account/settings/linkedaccounts/
  
• our license is CC0 https://github.com/w3c-cg/awesome-semantic-shapes/blob/main/LICENSE
• I'm following https://docs.github.com/en/repositories/archiving-a-github-repository/referencing-and-citing-content
• step (2) I login to Zenodo with Github
• step (5) I get a choice if about 20 repos of VladimirAlexiev and a couple of highlightjs, but not this repo
• and it directs me to https://docs.github.com/en/organizations/managing-oauth-access-to-your-organizations-data/approving-oauth-apps-for-your-organization

When OAuth app access restrictions are enabled, organization members and outside collaborators must request approval from an organization owner before they can authorize an OAuth app that has access to the organization's resources.

@ianbjacobs could you please enable w3c-cg for sharing with Zenodo? Or if you prefer, submit this repo to Zenodo?

[VladimirAlexiev]

@iovka and @daniel-tomaszuk I'm highly interested in structured SHACL-SHEX mappings. Can you send me a preprint of your work?

[iovka]

We could be happy to share a pre-print in the middle of next week.
I'm afraid you won't find mappings in this paper though, but mappings are part of the longer term goals of the research group.

[ianbjacobs]

@dontcallmedom, can you help with the above question about Zenodo? Thank you!

[dontcallmedom]

@VladimirAlexiev can you request approval for the Zenodo OAuth app via the github interface? otherwise I don't think I can easily approve it (short of doing the registration myself, which I'd rather not)

[domel]

Hi @VladimirAlexiev, my github ID is domel. I guess that you ping Daniel Tomaszuk and I'm Dominik Tomaszuk. 🙂

[VladimirAlexiev]

Hi @dontcallmedom !
I cannot auhtorize Zenodo OAuth for https://github.com/w3c-cg/ because I don't have the rights:
when following https://docs.github.com/en/organizations/managing-oauth-access-to-your-organizations-data/approving-oauth-apps-for-your-organization
I get Settings for an org I created (underpin), but not for w3c-cg because I'm only an outside collaborator:

[dontcallmedom]

I didn't expect you would have the rights to authorize it yourself, but thought you could request authorization through the UI - maybe you need to be a member of the org for that? I've sent you an invite to that end

[VladimirAlexiev]

@dontcallmedom
At https://github.com/settings/organizations I have more rights now but still don't get Settings.

https://zenodo.org/account/settings/github/: I now notice the top right corner: (updated a year ago) Sync now.
I synched and now I get more repos from Accord-Project. The total is 125, of which about 5 have Zenodo enabled, and only 1 is archived on Zenodor:

     10 Accord-Project
    113 VladimirAlexiev
      2 highlightjs

Maybe that screen (which has no pagination) has a limit? but 125 doesn't sound as a very likely limit?

Could you please check at https://github.com/organizations/w3c-cg/settings/oauth_application_policy ?
(And this is also relevant: https://github.com/settings/applications#authorized)

[dontcallmedom]

I think I have granted access to zenodo now - can you confirm?

[VladimirAlexiev]

Now at https://zenodo.org/account/settings/github/ when I do Sync now, I get Request failed with status code: 504
I got the same error once before, but now I always get it.
So I think there is some timeout in the Zenodo-Github communication.
I found this issue zenodo/zenodo-rdm#1107 and will add details there.

[VladimirAlexiev]

They thanked me for the details at zenodo/zenodo-rdm#1107, but I don't know when the bug will be fixed.
@jeswr , @TallTed , @tpluscode if you have fewer repos, can you please try to do it?
Or @dontcallmedom : can you add @amivanoff to this org, so he can try it?

[jeswr]

I tried and also get a 504 error

[ianbjacobs]

GitHub has reported some caching issues today, which may explain the 504.