The Australian e-Health Research Centre

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143 repositories

smart-forms
Public
React-based form renderer implementing Structured Data Capture (SDC) FHIR specification
react typescript fhir structured-data-capture
TypeScript
•
Apache License 2.0
•17•39•19•14•Updated Feb 25, 2025Feb 25, 2025
pathling
Public
Tools that make it easier to use FHIR® and clinical terminology within data analytics, built on Apache Spark.
spark analytics standards fhir terminology
Java
•
Apache License 2.0
•12•95•87•94•Updated Feb 25, 2025Feb 25, 2025
genomator
Public
Privacy-hardened, hallucination-resistant synthetic data generator.
Python
•
BSD 3-Clause Clear License
•0•1•0•0•Updated Feb 25, 2025Feb 25, 2025
cxrmate-ed
Public
Jupyter Notebook
•
Apache License 2.0
•0•1•0•0•Updated Feb 23, 2025Feb 23, 2025
cxrmate
Public
CXRMate: Longitudinal Data and a Semantic Similarity Reward for Chest X-Ray Report Generation
medical-imaging image-captioning chest-xray-images multimodal-learning radiology-reports chest-x-ray-report-generation
Python
•
Apache License 2.0
•3•15•13•0•Updated Feb 20, 2025Feb 20, 2025
fhir-bulk-java
Public
A Java client for the Bulk Data Export operation within the FHIR Bulk Data Access IG.
Java
•
Apache License 2.0
•0•5•0•1•Updated Feb 20, 2025Feb 20, 2025
azurescripts
Public
Shell
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Apache License 2.0
•0•0•0•0•Updated Feb 18, 2025Feb 18, 2025
snap2snomed
Public
Development version of Snap2Snomed. Please raise issues here: https://github.com/IHTSDO/snap2snomed
TypeScript
•
Other
•8•1•0•28•Updated Feb 13, 2025Feb 13, 2025
jre-docker
Public
Docker images for building base images capable of running Java applications.
java docker
Dockerfile
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Other
•0•3•0•0•Updated Feb 13, 2025Feb 13, 2025
parquet-on-fhir
Public
A specification for representing FHIR data within the Apache Parquet format.
Creative Commons Zero v1.0 Universal
•0•6•0•0•Updated Feb 12, 2025Feb 12, 2025
snowstorm-perf
Public
A temporary fork of Snowstorm to improve search performance for ECL member of queries
Java
•
Other
•87•0•0•0•Updated Feb 11, 2025Feb 11, 2025
smart-forms-ig
Public
GLSL
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Other
•0•4•0•2•Updated Feb 11, 2025Feb 11, 2025
org.hl7.fhir.core
Public
Java
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Apache License 2.0
•171•1•0•1•Updated Feb 11, 2025Feb 11, 2025
smart-test-data
Public
0•0•0•0•Updated Feb 10, 2025Feb 10, 2025
AskBeacon
Public
Jupyter Notebook
•0•1•0•0•Updated Feb 3, 2025Feb 3, 2025
ForensicSexEstimation
Public
A deep learning framework for forensic sex estimation from 3D CT
Python
•
Apache License 2.0
•0•0•0•0•Updated Jan 24, 2025Jan 24, 2025
logical-model-web
Public
Batchfile
•0•0•0•0•Updated Jan 21, 2025Jan 21, 2025
sql-on-fhir-v2
Public
This project provides the source for the SQL on FHIR v2.0 Implementation Guide
JavaScript
•
MIT License
•30•0•0•0•Updated Jan 13, 2025Jan 13, 2025
snowstorm-java-client
Public
Java client for Snowstorm
Apache License 2.0
•0•0•0•3•Updated Dec 20, 2024Dec 20, 2024
sql-on-fhir-evaluation
Public
Replication of a MIMIC-IV-based study in support of the SQL on FHIR paper.
HTML
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Apache License 2.0
•0•0•0•0•Updated Dec 19, 2024Dec 19, 2024
SMART-EHR-Launcher
Public
An EHR simulator dashboard testing tool to launch SMART on FHIR apps
react typescript fhir ehr
TypeScript
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Apache License 2.0
•2•3•0•0•Updated Dec 19, 2024Dec 19, 2024
ontoserver-deploy
Public
Sample deployment project for Ontoserver
HCL
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Apache License 2.0
•7•19•0•1•Updated Dec 13, 2024Dec 13, 2024
radgraph
Public
Python
•
Apache License 2.0
•1•0•1•0•Updated Dec 3, 2024Dec 3, 2024
onto-web-test
Public
HTML
•0•0•0•0•Updated Nov 26, 2024Nov 26, 2024
terraform-aws-serverless-beacon
Public
Serverless implementation of Beacon V2 protocol, to enable cheaper and faster exchange of genomic and phenotypic information
serverless terraform beacon
Python
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Other
•5•9•0•0•Updated Oct 24, 2024Oct 24, 2024
aehrc-helm
Public
Shell
•0•0•0•0•Updated Oct 23, 2024Oct 23, 2024
real-time-fhir
Public
A simulated FHIR data source that can write resources into a remote FHIR server in real time.
JavaScript
•
Other
•1•3•0•0•Updated Oct 23, 2024Oct 23, 2024
VariantSpark
Public
machine learning for genomic variants
emr aws bioinformatics association-studies variantspark gwas genome random-forest notebook vcf
JavaScript
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Other
•45•142•22•10•Updated Oct 17, 2024Oct 17, 2024
helm-charts
Public
Smarty
•5•0•0•0•Updated Oct 16, 2024Oct 16, 2024
imageclefmedical_caption_23
Public
MedICap: Code for the participation of team CSIRO at the ImageCLEFmedical Caption task of 2023.
medical-imaging image-captioning multimodal-learning multimodal report-generation medical-image-captioning
Jupyter Notebook
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Apache License 2.0
•0•3•3•0•Updated Oct 16, 2024Oct 16, 2024