From 05750418b127d0b6a0af28d8eaaf90ef6fdd5c14 Mon Sep 17 00:00:00 2001 From: notPlancha Date: Thu, 1 Feb 2024 14:04:16 +0000 Subject: [PATCH 1/6] started on pre commit --- .Rbuildignore | 1 + .Rprofile | 3 +- .gitattributes | 3 + .gitignore | 3 + .pre-commit-config.yaml | 16 + pixi.lock | 650 ++++++++++++++++++++++++++++++++++++++++ pixi.toml | 11 + 7 files changed, 686 insertions(+), 1 deletion(-) create mode 100644 .gitattributes create mode 100644 .pre-commit-config.yaml create mode 100644 pixi.lock create mode 100644 pixi.toml diff --git a/.Rbuildignore b/.Rbuildignore index 2535bb6..a8d3e5d 100644 --- a/.Rbuildignore +++ b/.Rbuildignore @@ -12,3 +12,4 @@ ^LICENSE$ ^revdep$ ^CRAN-SUBMISSION$ +^\.pre-commit-config\.yaml$ diff --git a/.Rprofile b/.Rprofile index f0f26bc..9215917 100644 --- a/.Rprofile +++ b/.Rprofile @@ -3,10 +3,11 @@ if (interactive()) { require(devtools) require(conflicted) require(desc) + # pak("r-lib/desc") # theres a bug # pak("r-lib/revdepcheck") # pak("jumpingrivers/inteRgrate") ## https://www.r-bloggers.com/2020/07/how-to-write-your-own-r-package-and-publish-it-on-cran/ - + ## https://github.com/DavisVaughan/extrachecks d <- desc::desc() tryit <- \() {devtools::load_all()} build_docs <- \() {devtools::document()} diff --git a/.gitattributes b/.gitattributes new file mode 100644 index 0000000..16ef5c5 --- /dev/null +++ b/.gitattributes @@ -0,0 +1,3 @@ +# GitHub syntax highlighting +pixi.lock linguist-language=YAML + diff --git a/.gitignore b/.gitignore index c499a1d..a4c5521 100644 --- a/.gitignore +++ b/.gitignore @@ -6,3 +6,6 @@ temp.* temp/ +# pixi environments +.pixi + diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml new file mode 100644 index 0000000..dd81b3e --- /dev/null +++ b/.pre-commit-config.yaml @@ -0,0 +1,16 @@ +# See https://pre-commit.com for more information +# See https://pre-commit.com/hooks.html for more hooks +repos: +- repo: https://github.com/pre-commit/pre-commit-hooks + rev: v3.2.0 + hooks: + - id: trailing-whitespace + - id: end-of-file-fixer + - id: check-yaml + - id: check-added-large-files +# TODO add roxygenyze https://lorenzwalthert.github.io/precommit/articles/available-hooks.html +# TODO add one that bumps dev version (manually write) +# TODO check what each of these does +# TODO add pre-commit to README +# TODO check extrachecks +# TODO check the email \ No newline at end of file diff --git a/pixi.lock b/pixi.lock new file mode 100644 index 0000000..89f0a9d --- /dev/null +++ b/pixi.lock @@ -0,0 +1,650 @@ +version: 3 +metadata: + content_hash: + win-64: e90c2ee71ad70fc0a1c8302029533a7d1498f2bffcd0eaa8d2934700e775dc1d + channels: + - 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vc >=14.1,<15.0a0 + - vs2015_runtime >=14.16.27012 + url: https://conda.anaconda.org/conda-forge/win-64/yaml-0.2.5-h8ffe710_2.tar.bz2 + hash: + md5: adbfb9f45d1004a26763652246a33764 + sha256: 4e2246383003acbad9682c7c63178e2e715ad0eb84f03a8df1fbfba455dfedc5 + build: h8ffe710_2 + arch: x86_64 + subdir: win-64 + build_number: 2 + license: MIT + license_family: MIT + size: 63274 + timestamp: 1641347623319 diff --git a/pixi.toml b/pixi.toml new file mode 100644 index 0000000..7421fea --- /dev/null +++ b/pixi.toml @@ -0,0 +1,11 @@ +[project] +name = "settingsSync" +authors = ["notPlancha "] +channels = ["conda-forge"] +platforms = ["win-64"] + +[tasks] +hook-install = "pre-commit install --hook-type pre-push" + +[dependencies] +pre-commit = ">=3.6.0,<3.7" From feb418f44c41b4476da661fb448aca5be40050d6 Mon Sep 17 00:00:00 2001 From: notPlancha Date: Fri, 2 Feb 2024 02:28:21 +0000 Subject: [PATCH 2/6] up dev version wo gitpython --- .Rbuildignore | 1 + .gitignore | 218 +++++++++++++++++++++- .pre-commit-config.yaml | 11 +- README.md | 12 ++ hook_scripts/up-dev-version.py | 36 ++++ pixi.lock | 319 +++++++++++++++++++++++++++++++++ pixi.toml | 5 + 7 files changed, 591 insertions(+), 11 deletions(-) create mode 100644 hook_scripts/up-dev-version.py diff --git a/.Rbuildignore b/.Rbuildignore index a8d3e5d..4e1decc 100644 --- a/.Rbuildignore +++ b/.Rbuildignore @@ -13,3 +13,4 @@ ^revdep$ ^CRAN-SUBMISSION$ ^\.pre-commit-config\.yaml$ +^hook_scripts$ diff --git a/.gitignore b/.gitignore index a4c5521..2a9b3b5 100644 --- a/.gitignore +++ b/.gitignore @@ -1,11 +1,219 @@ -.Rproj.user -.Rhistory -.RData -.Ruserdata -.httr-oauth + + temp.* temp/ # pixi environments .pixi + +# Byte-compiled / optimized / DLL files +__pycache__/ +*.py[cod] +*$py.class + +# C extensions +*.so + +# Distribution / packaging +.Python +build/ +develop-eggs/ +dist/ +downloads/ +eggs/ +.eggs/ +lib/ +lib64/ +parts/ +sdist/ +var/ +wheels/ +share/python-wheels/ +*.egg-info/ +.installed.cfg +*.egg +MANIFEST + +# PyInstaller +# Usually these files are written by a python script from a template +# before PyInstaller builds the exe, so as to inject date/other infos into it. +*.manifest +*.spec + +# Installer logs +pip-log.txt +pip-delete-this-directory.txt + +# Unit test / coverage reports +htmlcov/ +.tox/ +.nox/ +.coverage +.coverage.* +.cache +nosetests.xml +coverage.xml +*.cover +*.py,cover +.hypothesis/ +.pytest_cache/ +cover/ + +# Translations +*.mo +*.pot + +# Django stuff: +*.log +local_settings.py +db.sqlite3 +db.sqlite3-journal + +# Flask stuff: +instance/ +.webassets-cache + +# Scrapy stuff: +.scrapy + +# Sphinx documentation +docs/_build/ + +# PyBuilder +.pybuilder/ +target/ + +# Jupyter Notebook +.ipynb_checkpoints + +# IPython +profile_default/ +ipython_config.py + +# pyenv +# For a library or package, you might want to ignore these files since the code is +# intended to run in multiple environments; otherwise, check them in: +# .python-version + +# pipenv +# According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control. +# However, in case of collaboration, if having platform-specific dependencies or dependencies +# having no cross-platform support, pipenv may install dependencies that don't work, or not +# install all needed dependencies. +#Pipfile.lock + +# poetry +# Similar to Pipfile.lock, it is generally recommended to include poetry.lock in version control. +# This is especially recommended for binary packages to ensure reproducibility, and is more +# commonly ignored for libraries. +# https://python-poetry.org/docs/basic-usage/#commit-your-poetrylock-file-to-version-control +#poetry.lock + +# pdm +# Similar to Pipfile.lock, it is generally recommended to include pdm.lock in version control. +#pdm.lock +# pdm stores project-wide configurations in .pdm.toml, but it is recommended to not include it +# in version control. +# https://pdm.fming.dev/#use-with-ide +.pdm.toml + +# PEP 582; used by e.g. github.com/David-OConnor/pyflow and github.com/pdm-project/pdm +__pypackages__/ + +# Celery stuff +celerybeat-schedule +celerybeat.pid + +# SageMath parsed files +*.sage.py + +# Environments +.env +.venv +env/ +venv/ +ENV/ +env.bak/ +venv.bak/ + +# Spyder project settings +.spyderproject +.spyproject + +# Rope project settings +.ropeproject + +# mkdocs documentation +/site + +# mypy +.mypy_cache/ +.dmypy.json +dmypy.json + +# Pyre type checker +.pyre/ + +# pytype static type analyzer +.pytype/ + +# Cython debug symbols +cython_debug/ + +# PyCharm +# JetBrains specific template is maintained in a separate JetBrains.gitignore that can +# be found at https://github.com/github/gitignore/blob/main/Global/JetBrains.gitignore +# and can be added to the global gitignore or merged into this file. For a more nuclear +# option (not recommended) you can uncomment the following to ignore the entire idea folder. +.idea/ + +# History files +.Rhistory +.Rapp.history + +# Session Data files +.RData +.RDataTmp + +# User-specific files +.Ruserdata + +# Example code in package build process +*-Ex.R + +# Output files from R CMD build +/*.tar.gz + +# Output files from R CMD check +/*.Rcheck/ + +# RStudio files +.Rproj.user/ + +# produced vignettes +vignettes/*.html +vignettes/*.pdf + +# OAuth2 token, see https://github.com/hadley/httr/releases/tag/v0.3 +.httr-oauth + +# knitr and R markdown default cache directories +*_cache/ +/cache/ + +# Temporary files created by R markdown +*.utf8.md +*.knit.md + +# R Environment Variables +.Renviron + +# pkgdown site +docs/ + +# translation temp files +po/*~ + +# RStudio Connect folder +rsconnect/ diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index dd81b3e..062e25d 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -1,13 +1,12 @@ # See https://pre-commit.com for more information # See https://pre-commit.com/hooks.html for more hooks repos: -- repo: https://github.com/pre-commit/pre-commit-hooks - rev: v3.2.0 +- repo: local hooks: - - id: trailing-whitespace - - id: end-of-file-fixer - - id: check-yaml - - id: check-added-large-files + - id: up-dev-version + name: up-dev-version + description: Bumps the dev version in DESCRIPTION + entry: pixi run up-dev # TODO add roxygenyze https://lorenzwalthert.github.io/precommit/articles/available-hooks.html # TODO add one that bumps dev version (manually write) # TODO check what each of these does diff --git a/README.md b/README.md index 8a0df57..80102e0 100644 --- a/README.md +++ b/README.md @@ -17,4 +17,16 @@ pak::pak("notPlancha/settingsSync") You can directly call `settingsSync::sync()`, or use the Rstudio Addin (they do the same thing); and follow the instructions. The extension pulls the settings from Google Drive (if any), tries to merge them with the local settings (the package has conflict resolution), and then pushes the merged settings to Google Drive. ## Contributing +I'm using (pixi)[https://github.com/prefix-dev/pixi] to ease development, and (pre-commit)[https://pre-commit.com/]. So after cloning: + +```bash +# scoop install pixi +pixi install +pixi run hook-install +``` +should do the trick. After that open the project in Rstudio. + +> [!NOTE] +> I didn't add R to pixi because (Windows versions are not updated)[https://github.com/conda-forge/r-base-feedstock/issues/248] and they don't work well with rstudio (and [rstudio in conda is also not updated as of writing](https://github.com/conda-forge/rstudio-feedstock/issues/29)). + Feel free to open an issue or a PR. diff --git a/hook_scripts/up-dev-version.py b/hook_scripts/up-dev-version.py new file mode 100644 index 0000000..55a75ed --- /dev/null +++ b/hook_scripts/up-dev-version.py @@ -0,0 +1,36 @@ +from expression import pipe +from expression.collections import seq +from icecream import ic +import sys +from warnings import warn +# ic.disable() +version = None +with open('DESCRIPTION', 'r') as f: + lines = f.readlines() # to later write back to file + for line_number, line in enumerate(lines): + if 'Version:' in line: + version = ic(line.split(":")[1]) + version_line = ic(line_number) + break +if version is None: + raise ValueError("Version not found in DESCRIPTION file") + +try: + not_dev, dev = pipe(version.split("-"), seq.map(lambda x: x.strip())) +except ValueError: + warn("Version not found in DESCRIPTION file, assuming release version") + sys.exit(0) +ic(not_dev, dev) +print("Upping dev version before pushing") +version = pipe( + dev, + int, + lambda x: x + 1, + str, + lambda x: f"{not_dev}-{x}" +) +ic(version) +lines[version_line] = ic(f"Version: {version}\n") + +with open('DESCRIPTION', 'w') as f: + f.writelines(lines) \ No newline at end of file diff --git a/pixi.lock b/pixi.lock index 89f0a9d..c9f49bf 100644 --- a/pixi.lock +++ b/pixi.lock @@ -13,6 +13,27 @@ metadata: inputs_metadata: null custom_metadata: null package: +- platform: win-64 + name: asttokens + version: 2.4.1 + category: main + manager: conda + dependencies: + - 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platform: win-64 name: xz version: 5.2.6 diff --git a/pixi.toml b/pixi.toml index 7421fea..d3bf9de 100644 --- a/pixi.toml +++ b/pixi.toml @@ -6,6 +6,11 @@ platforms = ["win-64"] [tasks] hook-install = "pre-commit install --hook-type pre-push" +radian = "radian" +up-dev = "python hook_scripts/up-dev-version.py" [dependencies] pre-commit = ">=3.6.0,<3.7" +radian = ">=0.6.11,<0.7" +expression = ">=5.0.2,<5.1" +icecream = ">=2.1.3,<2.2" From 6058bd715bb59826ca0180cc1affd0cf6bbf521e Mon Sep 17 00:00:00 2001 From: notPlancha Date: Fri, 2 Feb 2024 02:56:24 +0000 Subject: [PATCH 3/6] updated pixi --- pixi.lock | 983 +++++++++++++++++++++++++----------------------------- 1 file changed, 448 insertions(+), 535 deletions(-) diff --git a/pixi.lock b/pixi.lock index c9f49bf..7e57b32 100644 --- a/pixi.lock +++ b/pixi.lock @@ -1,548 +1,518 @@ -version: 3 -metadata: - content_hash: - win-64: e90c2ee71ad70fc0a1c8302029533a7d1498f2bffcd0eaa8d2934700e775dc1d - channels: - - url: https://conda.anaconda.org/conda-forge/ - 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vc >=14.1,<15.0a0 - vs2015_runtime >=14.16.27012 - url: https://conda.anaconda.org/conda-forge/win-64/yaml-0.2.5-h8ffe710_2.tar.bz2 - hash: - md5: adbfb9f45d1004a26763652246a33764 - sha256: 4e2246383003acbad9682c7c63178e2e715ad0eb84f03a8df1fbfba455dfedc5 - build: h8ffe710_2 arch: x86_64 - subdir: win-64 - build_number: 2 + platform: win license: MIT license_family: MIT size: 63274 From 3ebae4408c11e8b84302e95b9a0c4a18f60c7502 Mon Sep 17 00:00:00 2001 From: notPlancha Date: Fri, 2 Feb 2024 03:01:49 +0000 Subject: [PATCH 4/6] w gitpython, so falta testar --- hook_scripts/up-dev-version.py | 6 +++++- 1 file changed, 5 insertions(+), 1 deletion(-) diff --git a/hook_scripts/up-dev-version.py b/hook_scripts/up-dev-version.py index 55a75ed..53bb4e2 100644 --- a/hook_scripts/up-dev-version.py +++ b/hook_scripts/up-dev-version.py @@ -3,6 +3,7 @@ from icecream import ic import sys from warnings import warn +import subprocess # ic.disable() version = None with open('DESCRIPTION', 'r') as f: @@ -33,4 +34,7 @@ lines[version_line] = ic(f"Version: {version}\n") with open('DESCRIPTION', 'w') as f: - f.writelines(lines) \ No newline at end of file + f.writelines(lines) + +subprocess.run(["git", "add", "DESCRIPTION"]) +subprocess.run(["git", "commit", "-m", f"Version {version}"]) \ No newline at end of file From da4018581ad2ed2491b55f651a18ca14a4c6951b Mon Sep 17 00:00:00 2001 From: notPlancha Date: Fri, 2 Feb 2024 13:54:14 +0000 Subject: [PATCH 5/6] Version 1.0.1-1 --- DESCRIPTION | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/DESCRIPTION b/DESCRIPTION index c7de85b..14bf55c 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,7 +1,7 @@ Type: Package Package: settingsSync Title: Rstudio Addin to Sync Settings and Keymaps -Version: 1.0.1-0 +Version: 1.0.1-1 Authors@R: person(, "notPlancha", , "Andre_Plancha@iscte-iul.pt", role = c("aut", "cre")) Author: notPlancha [aut, cre] From eccd1c77aa9d1c1c81528cfa2100866c953c528f Mon Sep 17 00:00:00 2001 From: notPlancha Date: Fri, 2 Feb 2024 14:45:11 +0000 Subject: [PATCH 6/6] added pre-commit --- .pre-commit-config.yaml | 5 +---- hook_scripts/up-dev-version.py | 31 ++++++++++++++++++++++--------- pixi.lock | 34 ++++++++++++++++++++++++++++++++++ pixi.toml | 2 ++ 4 files changed, 59 insertions(+), 13 deletions(-) diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index 062e25d..7ab0934 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -1,5 +1,6 @@ # See https://pre-commit.com for more information # See https://pre-commit.com/hooks.html for more hooks +# R specific hooks: https://github.com/lorenzwalthert/precommit repos: - repo: local hooks: @@ -7,9 +8,5 @@ repos: name: up-dev-version description: Bumps the dev version in DESCRIPTION entry: pixi run up-dev -# TODO add roxygenyze https://lorenzwalthert.github.io/precommit/articles/available-hooks.html -# TODO add one that bumps dev version (manually write) -# TODO check what each of these does -# TODO add pre-commit to README # TODO check extrachecks # TODO check the email \ No newline at end of file diff --git a/hook_scripts/up-dev-version.py b/hook_scripts/up-dev-version.py index 53bb4e2..433a741 100644 --- a/hook_scripts/up-dev-version.py +++ b/hook_scripts/up-dev-version.py @@ -1,12 +1,25 @@ -from expression import pipe +from expression import pipe # functional programming from expression.collections import seq -from icecream import ic +from icecream import ic # debugging import sys from warnings import warn -import subprocess -# ic.disable() +import subprocess # to run git commands +import click # to get user input +from pyprojroot.here import here # to get the root of the project + +desc = here("DESCRIPTION") +if not ("--debug" in sys.argv or "-d" in sys.argv): ic.disable() + +# input just to make sure +try: + result = click.confirm("Do you want to up the dev version?", default=True) + if not result: + sys.exit(0) +except click.Abort: + sys.exit(1) + version = None -with open('DESCRIPTION', 'r') as f: +with open(desc, 'r') as f: lines = f.readlines() # to later write back to file for line_number, line in enumerate(lines): if 'Version:' in line: @@ -22,7 +35,7 @@ warn("Version not found in DESCRIPTION file, assuming release version") sys.exit(0) ic(not_dev, dev) -print("Upping dev version before pushing") + version = pipe( dev, int, @@ -33,8 +46,8 @@ ic(version) lines[version_line] = ic(f"Version: {version}\n") -with open('DESCRIPTION', 'w') as f: +with open(desc, 'w') as f: f.writelines(lines) - subprocess.run(["git", "add", "DESCRIPTION"]) -subprocess.run(["git", "commit", "-m", f"Version {version}"]) \ No newline at end of file +subprocess.run(["git", "commit", "-m", f"Version {version}"]) +click.echo(f"Version {version} committed") \ No newline at end of file diff --git a/pixi.lock b/pixi.lock index 7e57b32..16848fc 100644 --- a/pixi.lock +++ b/pixi.lock @@ -7,6 +7,7 @@ environments: win-64: - conda: https://conda.anaconda.org/conda-forge/noarch/asttokens-2.4.1-pyhd8ed1ab_0.conda - conda: https://conda.anaconda.org/conda-forge/noarch/cfgv-3.3.1-pyhd8ed1ab_0.tar.bz2 + - conda: https://conda.anaconda.org/conda-forge/noarch/click-8.1.7-win_pyh7428d3b_0.conda - conda: https://conda.anaconda.org/conda-forge/noarch/colorama-0.4.6-pyhd8ed1ab_0.tar.bz2 - conda: https://conda.anaconda.org/conda-forge/noarch/distlib-0.3.8-pyhd8ed1ab_0.conda - conda: https://conda.anaconda.org/conda-forge/noarch/executing-2.0.1-pyhd8ed1ab_0.conda @@ -22,6 +23,7 @@ environments: - conda: https://conda.anaconda.org/conda-forge/noarch/prompt_toolkit-3.0.42-hd8ed1ab_0.conda - conda: https://conda.anaconda.org/conda-forge/noarch/pycparser-2.21-pyhd8ed1ab_0.tar.bz2 - conda: https://conda.anaconda.org/conda-forge/noarch/pygments-2.17.2-pyhd8ed1ab_0.conda + - conda: https://conda.anaconda.org/conda-forge/noarch/pyprojroot-0.3.0-pyhd8ed1ab_0.conda - conda: https://conda.anaconda.org/conda-forge/noarch/radian-0.6.11-pyhd8ed1ab_0.conda - conda: https://conda.anaconda.org/conda-forge/noarch/setuptools-69.0.3-pyhd8ed1ab_0.conda - conda: https://conda.anaconda.org/conda-forge/noarch/six-1.16.0-pyh6c4a22f_0.tar.bz2 @@ -139,6 +141,23 @@ packages: license_family: MIT size: 10788 timestamp: 1629909423398 +- kind: conda + name: click + version: 8.1.7 + build: win_pyh7428d3b_0 + subdir: noarch + noarch: python + url: https://conda.anaconda.org/conda-forge/noarch/click-8.1.7-win_pyh7428d3b_0.conda + sha256: 90236b113b9a20041736e80b80ee965167f9aac0468315c55e2bad902d673fb0 + md5: 3549ecbceb6cd77b91a105511b7d0786 + depends: + - __win + - colorama + - python >=3.8 + license: BSD-3-Clause + license_family: BSD + size: 85051 + timestamp: 1692312207348 - kind: conda name: colorama version: 0.4.6 @@ -503,6 +522,21 @@ packages: license_family: BSD size: 860425 timestamp: 1700608076927 +- kind: conda + name: pyprojroot + version: 0.3.0 + build: pyhd8ed1ab_0 + subdir: noarch + noarch: python + url: https://conda.anaconda.org/conda-forge/noarch/pyprojroot-0.3.0-pyhd8ed1ab_0.conda + sha256: 560cabb0d3e917d732ce729709f53407407e4b9f8d8e2ea0f399482e9406c26c + md5: a8cf267fb068e62490a8ae9f7918c7f0 + depends: + - python >=3.7 + license: MIT + license_family: MIT + size: 12705 + timestamp: 1679412805849 - kind: conda name: python version: 3.12.1 diff --git a/pixi.toml b/pixi.toml index d3bf9de..7dab26a 100644 --- a/pixi.toml +++ b/pixi.toml @@ -14,3 +14,5 @@ pre-commit = ">=3.6.0,<3.7" radian = ">=0.6.11,<0.7" expression = ">=5.0.2,<5.1" icecream = ">=2.1.3,<2.2" +click = ">=8.1.7,<8.2" +pyprojroot = ">=0.3.0,<0.4"