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Working on rejection classification on WSI of renal allograft rejection #19

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Saurabh528 opened this issue Feb 1, 2025 · 1 comment

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@Saurabh528
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Hi Andrew,

I just wanted to take a moment to thank you for the wonderful work you've done on Titan. It's truly impressive!

I'm currently working on predicting renal allograft rejection in whole slide images (H&E stain) (scanned at 40X) and need to extract the following classifications:

IFTA Grade
AMR vs No AMR
TCMR vs No TCMR

Could you please help me set up the configuration file for this task? I want to apply zero shot classifcation on my WSI.

@andrewsong90
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Hi @Saurabh528

Thanks for your interest in our project.
Could you provide more details on the use case?

  • Were you able to extract patch/slide features with CONCHv1.5/TITAN for all your WSIs?
  • By zero-shot classification, are you referring to cross-modal zero-shot classification? or unimodal zero-shot classification (e.g., simple-shot or KNN)?

Thanks,

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