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tinyPulsePPG.ino
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/*
* ATTiny84 - Pulse Oximeter with PPG display
* DEFINITELY NOT FOR MEDICAL USE
*
* j.n.magee 15-10-2019
*/
#include "ssd1306h.h"
#include "MAX30102.h"
#include "Pulse.h"
#include <avr/pgmspace.h>
#include <EEPROM.h>
#include <avr/sleep.h>
#include <avr/wdt.h>
// Routines to clear and set bits
#ifndef cbi
#define cbi(sfr, bit) (_SFR_BYTE(sfr) &= ~_BV(bit))
#endif
#ifndef sbi
#define sbi(sfr, bit) (_SFR_BYTE(sfr) |= _BV(bit))
#endif
SSD1306 oled;
MAX30102 sensor;
Pulse pulseIR;
Pulse pulseRed;
MAFilter bpm;
#define LED 1
#define BUTTON 3
#define OPTIONS 7
static const uint8_t heart_bits[] PROGMEM = { 0x00, 0x00, 0x38, 0x38, 0x7c, 0x7c, 0xfe, 0xfe, 0xfe, 0xff,
0xfe, 0xff, 0xfc, 0x7f, 0xf8, 0x3f, 0xf0, 0x1f, 0xe0, 0x0f,
0xc0, 0x07, 0x80, 0x03, 0x00, 0x01, 0x00, 0x00, 0x00, 0x00,
0x00, 0x00 };
//spo2_table is approximated as -45.060*ratioAverage* ratioAverage + 30.354 *ratioAverage + 94.845 ;
const uint8_t spo2_table[184] PROGMEM =
{ 95, 95, 95, 96, 96, 96, 97, 97, 97, 97, 97, 98, 98, 98, 98, 98, 99, 99, 99, 99,
99, 99, 99, 99, 100, 100, 100, 100, 100, 100, 100, 100, 100, 100, 100, 100, 100, 100, 100, 100,
100, 100, 100, 100, 99, 99, 99, 99, 99, 99, 99, 99, 98, 98, 98, 98, 98, 98, 97, 97,
97, 97, 96, 96, 96, 96, 95, 95, 95, 94, 94, 94, 93, 93, 93, 92, 92, 92, 91, 91,
90, 90, 89, 89, 89, 88, 88, 87, 87, 86, 86, 85, 85, 84, 84, 83, 82, 82, 81, 81,
80, 80, 79, 78, 78, 77, 76, 76, 75, 74, 74, 73, 72, 72, 71, 70, 69, 69, 68, 67,
66, 66, 65, 64, 63, 62, 62, 61, 60, 59, 58, 57, 56, 56, 55, 54, 53, 52, 51, 50,
49, 48, 47, 46, 45, 44, 43, 42, 41, 40, 39, 38, 37, 36, 35, 34, 33, 31, 30, 29,
28, 27, 26, 25, 23, 22, 21, 20, 19, 17, 16, 15, 14, 12, 11, 10, 9, 7, 6, 5,
3, 2, 1 } ;
int getVCC() {
return min(11264/analogRead(12),99);
}
void print_digit(int x, int y, long val, char c=' ', uint8_t field = 3,
const int BIG = 2){
uint8_t ff = field;
do {
char ch = (val!=0) ? val%10+'0': c;
oled.drawChar( x+BIG*(ff-1)*6, y, ch, BIG);
val = val/10;
--ff;
} while (ff>0);
}
/*
* Record, scale and display PPG Wavefoem
*/
const uint8_t MAXWAVE = 72;
class Waveform {
public:
Waveform(void) {wavep = 0;}
void record(int waveval) {
waveval = waveval/8; // scale to fit in byte
waveval += 128; //shift so entired waveform is +ve
waveval = waveval<0? 0 : waveval;
waveform[wavep] = (uint8_t) (waveval>255)?255:waveval;
wavep = (wavep+1) % MAXWAVE;
}
void scale() {
uint8_t maxw = 0;
uint8_t minw = 255;
for (int i=0; i<MAXWAVE; i++) {
maxw = waveform[i]>maxw?waveform[i]:maxw;
minw = waveform[i]<minw?waveform[i]:minw;
}
uint8_t scale8 = (maxw-minw)/4 + 1; //scale * 8 to preserve precision
uint8_t index = wavep;
for (int i=0; i<MAXWAVE; i++) {
disp_wave[i] = 31-((uint16_t)(waveform[index]-minw)*8)/scale8;
index = (index + 1) % MAXWAVE;
}
}
void draw(uint8_t X) {
for (int i=0; i<MAXWAVE; i++) {
uint8_t y = disp_wave[i];
oled.drawPixel(X+i, y);
if (i<MAXWAVE-1) {
uint8_t nexty = disp_wave[i+1];
if (nexty>y) {
for (uint8_t iy = y+1; iy<nexty; ++iy) oled.drawPixel(X+i, iy);
} else if (nexty<y) {
for (uint8_t iy = nexty+1; iy<y; ++iy) oled.drawPixel(X+i, iy);
}
}
}
}
private:
uint8_t waveform[MAXWAVE];
uint8_t disp_wave[MAXWAVE];
uint8_t wavep = 0;
} wave;
int beatAvg;
int SPO2, SPO2f;
int voltage;
bool filter_for_graph = false;
bool draw_Red = false;
uint8_t pcflag =0;
uint8_t istate = 0;
uint8_t sleep_counter = 0;
ISR(PCINT0_vect){
pcflag = 1;
}
void checkbutton(){
if (pcflag && !digitalRead(BUTTON)) {
istate = (istate +1) % 4;
filter_for_graph = istate & 0x01;
draw_Red = istate & 0x02;
EEPROM.write(OPTIONS, filter_for_graph);
EEPROM.write(OPTIONS+1, draw_Red);
}
pcflag = 0;
}
void go_sleep() {
oled.fill(0);
oled.off();
delay(10);
sensor.off();
delay(10);
cbi(ADCSRA, ADEN); // disable adc
delay(10);
pinMode(0,INPUT);
pinMode(2,INPUT);
set_sleep_mode(SLEEP_MODE_PWR_DOWN);
sleep_mode(); // sleep until button press
// cause reset
wdt_enable(WDTO_15MS);
wdt_reset();
while(1);
}
void draw_oled(int msg) {
oled.firstPage();
do{
switch(msg){
case 0: oled.drawStr(10,0,F("Device error"),1);
break;
case 1: oled.drawStr(13,10,F("PLACE"),1);
oled.drawStr(10,20,F("FINGER"),1);
oled.drawChar(100,0,voltage/10+'0');
oled.drawChar(106,0,'.');
oled.drawChar(112,0,voltage%10+'0');
oled.drawChar(118,0,'V');
oled.drawStr(84,14,F("Display"),1);
if (draw_Red)
oled.drawStr(84,24,F("Red"),1);
else
oled.drawStr(84,24,F("IR"),1);
if (filter_for_graph)
oled.drawStr(108,24,F("Avg"),1);
else
oled.drawStr(108,24,F("Raw"),1);
break;
case 2: print_digit(86,0,beatAvg);
wave.draw(8);
print_digit(98,16,SPO2f,' ',3,1);
oled.drawChar(116,16,'%');
print_digit(98,24,SPO2,' ',3,1);
oled.drawChar(116,24,'%');
break;
case 3: oled.drawStr(28,12,F("tinyPulsePPG"),1);
oled.drawXBMP(6,8,16,16,heart_bits);
oled.drawXBMP(106,8,16,16,heart_bits);
break;
case 4: oled.drawStr(28,12,F("OFF IN"),1);
oled.drawChar(76,12,10-sleep_counter/10+'0');
oled.drawChar(82,12,'s');
break;
}
} while (oled.nextPage());
}
void setup(void) {
MCUSR = 0;
wdt_disable();
pinMode(LED, OUTPUT);
pinMode(BUTTON, INPUT_PULLUP);
filter_for_graph = EEPROM.read(OPTIONS);
draw_Red = EEPROM.read(OPTIONS+1);
oled.init();
oled.fill(0x00);
draw_oled(3);
delay(3000);
if (!sensor.begin()) {
draw_oled(0);
while (1);
}
sensor.setup();
sbi(GIMSK, PCIE); // set up pin change interrupt
sbi(PCMSK, PCINT3);
sei();
}
long lastBeat = 0; //Time of the last beat
long displaytime = 0; //Time of the last display update
bool led_on = false;
void loop() {
sensor.check();
long now = millis(); //start time of this cycle
if (!sensor.available()) return;
uint32_t irValue = sensor.getIR();
uint32_t redValue = sensor.getRed();
sensor.nextSample();
if (irValue<5000) {
voltage = getVCC();
checkbutton();
draw_oled(sleep_counter<=70 ? 1 : 4); // finger not down message
delay(100);
++sleep_counter;
if (sleep_counter>100) {
go_sleep();
sleep_counter = 0;
}
} else {
sleep_counter = 0;
// remove DC element
int16_t IR_signal, Red_signal;
bool beatRed, beatIR;
if (!filter_for_graph) {
IR_signal = pulseIR.dc_filter(irValue) ;
Red_signal = pulseRed.dc_filter(redValue);
beatRed = pulseRed.isBeat(pulseRed.ma_filter(Red_signal));
beatIR = pulseIR.isBeat(pulseIR.ma_filter(IR_signal));
} else {
IR_signal = pulseIR.ma_filter(pulseIR.dc_filter(irValue)) ;
Red_signal = pulseRed.ma_filter(pulseRed.dc_filter(redValue));
beatRed = pulseRed.isBeat(Red_signal);
beatIR = pulseIR.isBeat(IR_signal);
}
// invert waveform to get classical BP waveshape
wave.record(draw_Red ? -Red_signal : -IR_signal );
// check IR or Red for heartbeat
if (draw_Red ? beatRed : beatIR){
long btpm = 60000/(now - lastBeat);
if (btpm > 0 && btpm < 200) beatAvg = bpm.filter((int16_t)btpm);
lastBeat = now;
digitalWrite(LED, HIGH);
led_on = true;
// compute SpO2 ratio
long numerator = (pulseRed.avgAC() * pulseIR.avgDC())/256;
long denominator = (pulseRed.avgDC() * pulseIR.avgAC())/256;
int RX100 = (denominator>0) ? (numerator * 100)/denominator : 999;
// using formula
SPO2f = (10400 - RX100*17+50)/100;
// from table
if ((RX100>=0) && (RX100<184))
SPO2 = pgm_read_byte_near(&spo2_table[RX100]);
}
// update display every 50 ms if fingerdown
if (now-displaytime>50) {
displaytime = now;
wave.scale();
draw_oled(2);
}
}
// flash led for 25 ms
if (led_on && (now - lastBeat)>25){
digitalWrite(LED, LOW);
led_on = false;
}
}