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main.cpp
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#include <cstdio>
#include <omp.h>
#include <iostream>
#include <ostream>
#include <fstream>
#include <unordered_map>
#include <vector>
#include <chrono>
using std::chrono::high_resolution_clock;
using std::chrono::duration_cast;
using std::chrono::duration;
using std::chrono::milliseconds;
long timed_portion(int row_begin_size, int* row_begin, int* col_indices, double* values, int& sigma_count);
void do_row(int row_begin_size, int* row_begin, int* col_indices, double* values, std::ostream &out);
void print_csr(int row_begin_size, int i, int* row_begin, int* col_indices, double* values);
template <typename S> std::ostream& operator<<(std::ostream& os,
const std::vector<S>& vector)
{
// Printing all the elements
// using <<
os << "[";
for (S element : vector) {
os << element << ", ";
}
os << "]";
return os;
}
class Site
{
public:
std::string name;
int id;
int num_outgoing_edges;
std::vector<int> incoming_edges;
friend std::ostream& operator<<(std::ostream& os, Site const & s) {
return os << "Site{name="<<s.name<<" id="<<s.id<<", incoming_edges=" << s.incoming_edges << ", num_outgoing_edges="<<s.num_outgoing_edges << "}";
}
};
static std::unordered_map<std::string, Site *> sites_by_ref;
static std::vector<Site *> sites_by_id;
Site* get_site(const std::string &name)
{
Site *site;
if (sites_by_ref.count(name) == 0)
{
site = new Site{name, (int)sites_by_id.size(), 0};
sites_by_id.push_back(site);
sites_by_ref.insert({name, site});
}
else
{
site = sites_by_ref[name];
}
return site;
}
int main(int argc, char *argv[])
{
std::ifstream txt(argv[1]);
std::string first_token , second_token;
while (txt >> first_token)
{
txt >> second_token;
Site* from = get_site(first_token);
Site* to = get_site(second_token);
from->num_outgoing_edges++;
to->incoming_edges.push_back(from->id);
}
/*for (Site* element : sites_by_id) {
std::cout << *element << std::endl;
}*/
size_t row_begin_size = sites_by_id.size() + 1;
int* row_begin = new int[row_begin_size];
int next_row_begin = 0;
row_begin[0] = 0;
int row_size;
for(int i = 1; i < row_begin_size; i++){
row_size = sites_by_id[i - 1]->incoming_edges.size();
next_row_begin += row_size;
row_begin[i] = next_row_begin;
}
double* values = new double[next_row_begin];
int* col_indices = new int[next_row_begin];
for(int i = 0; i < row_begin_size - 1; i++){
int this_row_begin = row_begin[i];
Site* site = sites_by_id[i];
for (size_t j = 0; j < site->incoming_edges.size(); j++)
{
int to = site->incoming_edges[j];
col_indices[this_row_begin+j] = to;
values[this_row_begin+j] = 1.0/sites_by_id[to]->num_outgoing_edges;
}
}
#ifdef PRINT_CSR
print_csr(row_begin_size, next_row_begin, row_begin, col_indices, values);
#endif
std::ofstream rb("timings.csv");
rb << "Test No.;Scheduling Method;Chunk Size;No. of Iterations;Timings in secs for each number of threads;;;;;;;;\n";
rb << ";;;;1;2;3;4;5;6;7;8;\n";
int chunk_sizes[] = {5,20,50,100,1000, 10000, 40000,100000,400000, 1000000};
omp_sched_t scheduling[] = {omp_sched_auto, omp_sched_dynamic, omp_sched_static, omp_sched_guided};
std::string scheduling_names[] = {"auto", "dynamic", "static", "guided"};
for (size_t sched_index = 0; sched_index < 4; sched_index++)
{
for (size_t i = 0; i < 10; i++)
{
omp_set_schedule(scheduling[sched_index], chunk_sizes[i]);
rb << 1 + sched_index*10 + i << ";" << scheduling_names[sched_index] << ";" <<chunk_sizes[i]<<";";
do_row(row_begin_size, row_begin, col_indices, values, rb);
}
}
}
long timed_portion(int row_begin_size, int* row_begin, int* col_indices, double* values, int& sigma_count)
{
double alpha = 0.2;
double* r = new double[sites_by_id.size()];
double* r_next = new double[sites_by_id.size()];
for (size_t i = 0; i < sites_by_id.size(); i++)
{
r[i] = 1;
}
//BEGIN TIMED PORTION
auto t1 = high_resolution_clock::now();
// int t_thr;
// #pragma omp threadprivate(t_thr)
int row, col_indice, col;
double sum;
double sigma = 1;
#pragma omp parallel shared(r, r_next, row_begin, col_indices, values, row_begin_size, sigma_count, sigma) private(row, col_indice, col, sum)
{
while (sigma > 1e-6)
{
#pragma omp for
for(row = 0; row < row_begin_size - 1; row++){
sum = 0;
for(col_indice = row_begin[row]; col_indice < row_begin[row+1]; col_indice++){
col = col_indices[col_indice];
sum += r[col] * values[col_indice];
}
r_next[row] = sum * alpha + (1 - alpha);
}
#pragma omp single
{
sigma = 0;
}
#pragma omp for reduction(+:sigma)
for(row = 0; row < row_begin_size - 1; row++){
sigma = sigma + std::abs(r_next[row] - r[row]);
}
#pragma omp single
{
std::swap(r, r_next);
sigma_count++;
//std::cout << "sigma_"<< sigma_count << " = " << sigma << "\n";
}
}
}
//END TIMED PORTION
auto t3 = high_resolution_clock::now();
int max_indices[] = {-1, -1, -1, -1, -1};
double max_values[] = {-1, -1, -1, -1, -1};
for (size_t i = 0; i < row_begin_size - 1; i++)
{
size_t breaking = -1;
for (size_t j = 0; j < 5; j++)
{
if(max_values[j]<=r[i]){
breaking = j;
} else {
break;
}
}
if(breaking != -1){
for (size_t j = 0; j < breaking; j++)
{
max_indices[j] = max_indices[j+1];
max_values[j] = max_values[j+1];
}
max_indices[breaking] = i;
max_values[breaking] = r[i];
}
}
//END TIMED PORTION
auto t2 = high_resolution_clock::now();
std::ofstream rb("top5.txt");
for (size_t i = 0; i < 5; i++)
{
rb << sites_by_id[max_indices[i]]->name << ": " << max_values[i] << "\n";
}
/* Getting number of milliseconds as an integer. */
auto ms_int = duration_cast<milliseconds>(t2 - t1);
delete r;
delete r_next;
return ms_int.count();
}
void do_row(int row_begin_size, int* row_begin, int* col_indices, double* values, std::ostream &out)
{
int sigma_count = 0;
omp_set_num_threads(1);
long time = timed_portion(row_begin_size, row_begin, col_indices, values, sigma_count);
out << sigma_count << ";";
out << time;
out << ";";
for (size_t i = 2; i <= 8; i++)
{
omp_set_num_threads(i);
out << timed_portion(row_begin_size, row_begin, col_indices, values, sigma_count);
out << ";";
}
out << "\n";
}
void print_csr(int row_begin_size, int next_row_begin, int* row_begin, int* col_indices, double* values)
{
std::ofstream rb("csr.txt");
for (size_t i = 0; i < row_begin_size; i++)
{
rb << row_begin[i] << " ";
}
rb << "\n";
for (size_t i = 0; i < next_row_begin; i++)
{
rb << values[i] << " ";
}
rb << "\n";
for (size_t i = 0; i < next_row_begin; i++)
{
rb << col_indices[i] << " ";
}
rb << "\n";
}