diff --git a/dockstore_launcher_config/compose.config b/dockstore_launcher_config/compose.config
index 0dcadd4..67f2aca 100644
--- a/dockstore_launcher_config/compose.config
+++ b/dockstore_launcher_config/compose.config
@@ -20,6 +20,7 @@
 "DOCKSTORE_ZENODO_ACCESS_TOKEN":"",
 "DOCKSTORE_ZENODO_COMMUNITY_ID":"",
 "DOCUMENTATION_URL":"foobar",
+"DOI_GENERATION_POLICY": "ALLOW_LIST",
 "DOMAIN_NAME":"foobar",
 "ELASTICSEARCH_DOMAIN":"replaceme",
 "ELASTICSEARCH_MAX_CONCURRENT_SESSIONS":"123",
@@ -37,6 +38,7 @@
 "GITHUB_CLIENT2_ID":"foobared",
 "GITHUB_CLIENT2_SECRET":"foobared",
 "GITHUB_CODESPACES_IMPORT_URL":"replaceme",
+"GITHUB_ORGS_WITH_DOI_GENERATION": "",
 "GITLAB_CLIENT_ID":"foobar",
 "GITLAB_CLIENT_SECRET":"foobar",
 "GOOGLE_CLIENT_ID":"potato",
diff --git a/templates/web.yml.template b/templates/web.yml.template
index d3ea375..2ec3efc 100644
--- a/templates/web.yml.template
+++ b/templates/web.yml.template
@@ -27,6 +27,8 @@ zenodoRedirectURI: https://{{ DOMAIN_NAME }}/auth/zenodo.org
 zenodoUrl: {{ ZENODO_URL }}
 dockstoreZenodoAccessToken: {{ DOCKSTORE_ZENODO_ACCESS_TOKEN }}
 dockstoreZenodoCommunityId: {{ DOCKSTORE_ZENODO_COMMUNITY_ID }}
+doiAutoGenerationPolicy: {{ DOI_GENERATION_POLICY }}
+gitHubOrgsWithDoiGeneration: [ {{ GITHUB_ORGS_WITH_DOI_GENERATION }} ]
 
 orcidClientID: {{ ORCID_CLIENT_ID }}
 orcidClientSecret: {{ ORCID_CLIENT_SECRET }}