Dockerfile_v5.6.1

# Install anaconda Python stack and some other useful tools
FROM jupyter/base-notebook

USER root
RUN apt-get update && \
  apt-get install -y dialog net-tools build-essential
USER jovyan

# Install gfortran and editors
RUN conda install -y -c conda-forge \
  scipy \
  compilers \
  lapack \
  vim \
  nano \
  git \
  tar \
  curl \
  nose

# set env variables
ENV CLAW ${HOME}/clawpack-v5.6.1
ENV NETCDF4_DIR /opt/conda
ENV FC gfortran
# this is needed to find libraries when building geoclaw (particularly lapack)
ENV LIB_PATHS /opt/conda/lib

# Install clawpack-v5.6.1:
RUN pip install --src=/${HOME}/ --user -e git+https://github.com/clawpack/clawpack.git@v5.6.1#egg=clawpack-v5.6.1

# set prompt:
RUN echo 'export PS1="jovyan $ "' >> ~/.bashrc

WORKDIR ${CLAW}
# Download the master branch of the apps repository and rename:
# (You can change `master` to a commit hash for a different version)
RUN curl -sL https://github.com/clawpack/apps/archive/master.tar.gz | tar xz
RUN mv apps-* apps

WORKDIR ${HOME}
CMD [ "/bin/bash" ]