diff --git a/_sources/about.rst.txt b/_sources/about.rst.txt index ecaf8a148..2b99d1464 100644 --- a/_sources/about.rst.txt +++ b/_sources/about.rst.txt @@ -117,8 +117,8 @@ Citing this work If you use Clawpack in publications, please cite the software itself as well, with a citation similar to the following:: - Clawpack Development Team (2020), Clawpack Version 5.7.1, - http://www.clawpack.org, doi: 10.5281/zenodo.4025432 + Clawpack Development Team (2024), Clawpack Version 5.10.0, + http://www.clawpack.org, doi: 10.5281/zenodo.10896214 Here's the bibtex:: @@ -126,9 +126,9 @@ Here's the bibtex:: title={Clawpack software}, author={{Clawpack Development Team}}, url={http://www.clawpack.org}, - note={Version 5.7.1}, - doi={https://doi.org/10.5281/zenodo.4025432}, - year={2020}} + note={Version 5.10.0}, + doi={https://doi.org/10.5281/zenodo.10896214}, + year={2024}} Please fill in the version number that you used, and its year, with the appropriate DOI from `Zenodo `_, if available. diff --git a/_sources/changes_to_master.rst.txt b/_sources/changes_to_master.rst.txt index cfb3f90b3..6bec44867 100644 --- a/_sources/changes_to_master.rst.txt +++ b/_sources/changes_to_master.rst.txt @@ -3,12 +3,12 @@ .. _changes_to_master: =============================== -Changes to master since v5.9.2 +Changes to master since v5.10.0 =============================== Follow the links to see changes that have been made to the master branch of -each repository since the last release (v5.9.2) on November 4, 2023. +each repository since the last release (v5.10.0) on March 29, 2024. These changes should appear in the next release. If you need them now, see :ref:`developers` for instructions on cloning and installing from the @@ -31,48 +31,48 @@ Changes to classic See `classic diffs -`_ +`_ Changes to clawutil ------------------- See `clawutil diffs -`_ +`_ Changes to visclaw ------------------ See `visclaw diffs -`_ +`_ Changes to riemann ------------------ See `riemann diffs -`_ +`_ Changes to amrclaw ------------------ See `amrclaw diffs -`_ +`_ Changes to geoclaw ------------------ -See `geoclaw diffs `_ +See `geoclaw diffs `_ Changes to PyClaw ------------------ -See `pyclaw diffs `_ +See `pyclaw diffs `_ =========================== Other Clawpack Repositories @@ -82,10 +82,10 @@ The repositories below are not included in the Clawpack tarfile or pip install, but changes to these repositories may also be of interest. - `apps diffs - `_ + `_ - `doc diffs `_ - `docker-files diffs - `_ + `_ diff --git a/_sources/installing_fortcodes.rst.txt b/_sources/installing_fortcodes.rst.txt index 7f30a9c34..c52553afa 100644 --- a/_sources/installing_fortcodes.rst.txt +++ b/_sources/installing_fortcodes.rst.txt @@ -36,9 +36,9 @@ Download a tar file from one of these sources: After downloading a tar file you can do, e.g. :: - tar -xzf clawpack-v5.9.2.tar.gz - cd clawpack-v5.9.2 - export CLAW=/full/path/to/clawpack-v5.9.2 # in bash + tar -xzf clawpack-v5.10.0.tar.gz + cd clawpack-v5.10.0 + export CLAW=/full/path/to/clawpack-v5.10.0 # in bash The last command sets an environment variable when using the bash shell. The syntax may be different in other shells. Replace `/full/path/to` @@ -60,7 +60,7 @@ See :ref:`developers` for more details, but the basic commands are:: git clone https://github.com/clawpack/clawpack.git cd clawpack - git checkout v5.9.2 # or an older version; `git tag -l` to list options + git checkout v5.10.0 # or an older version; `git tag -l` to list options git submodule init # for repositories pyclaw, clawutil, visclaw, etc. git submodule update # clones all the submodule repositories export CLAW=/full/path/to/clawpack # in bash diff --git a/_sources/installing_pip.rst.txt b/_sources/installing_pip.rst.txt index c15ac6829..607c758d6 100644 --- a/_sources/installing_pip.rst.txt +++ b/_sources/installing_pip.rst.txt @@ -32,7 +32,7 @@ Clawpack is via:: or, more specifically, :: - pip install --user clawpack==v5.9.2 + pip install --user clawpack==v5.10.0 or you can choose a previous version from the `PyPi history `__. @@ -56,7 +56,7 @@ following command want to change anything in this command)**:: pip install --src=$HOME/clawpack_src --user --no-build-isolation -e \ - git+https://github.com/clawpack/clawpack.git@v5.9.2#egg=clawpack + git+https://github.com/clawpack/clawpack.git@v5.10.0#egg=clawpack **Notes:** @@ -71,7 +71,7 @@ want to change anything in this command)**:: :ref:`installing_options` if you want more control. - This will download Clawpack (via a git clone) into the directory - `$HOME/clawpack_src/clawpack-v5.9.2`. The top + `$HOME/clawpack_src/clawpack-v5.10.0`. The top installation directory can be changed by modifying the ``--src`` target (or omit this part to put it in your current working directory). If you have already downloaded Clawpack via a different mechanism then @@ -92,11 +92,11 @@ want to change anything in this command)**:: - In order to use the Fortran codes within Clawpack (`classic`, `amrclaw`, or `geoclaw`), you should then set the environment - variable `CLAW` to point to the `clawpack-v5.9.2` directory within + variable `CLAW` to point to the `clawpack-v5.10.0` directory within the installation directory `$HOME/clawpack_src`, and `FC` to point to the desired Fortran compiler, e.g. in the bash shell:: - export CLAW=$HOME/clawpack_src/clawpack-v5.9.2 + export CLAW=$HOME/clawpack_src/clawpack-v5.10.0 export FC=gfortran diff --git a/_sources/releases.rst.txt b/_sources/releases.rst.txt index 64df88ffd..8a0bf4e59 100644 --- a/_sources/releases.rst.txt +++ b/_sources/releases.rst.txt @@ -37,8 +37,8 @@ can also be referenced with the single DOI `10.17605/osf.io/kmw6h `__. See :ref:`citing` for more information on how best to cite Clawpack. -* :ref:`release_5_10_0` -- TBA - `[DOI 10.5281/zenodo.XX] `_ +* :ref:`release_5_10_0` -- March 29, 2024 + `[DOI 10.5281/zenodo.10896214] `_ * :ref:`release_5_9_2` -- November 4, 2023 `[DOI 10.5281/zenodo.10076317] `_ * :ref:`release_5_9_1` -- October 2, 2023 diff --git a/about.html b/about.html index bdb001939..fa44f69ba 100644 --- a/about.html +++ b/about.html @@ -174,8 +174,8 @@

License

Citing this work

If you use Clawpack in publications, please cite the software itself as well, with a citation similar to the following:

-
Clawpack Development Team (2020), Clawpack Version 5.7.1,
-http://www.clawpack.org, doi: 10.5281/zenodo.4025432
+
Clawpack Development Team (2024), Clawpack Version 5.10.0,
+http://www.clawpack.org, doi: 10.5281/zenodo.10896214
 

 

 
Here’s the bibtex:

@@ -183,9 +183,9 @@ 
Licensetitle={Clawpack software},
     author={{Clawpack Development Team}},
     url={http://www.clawpack.org},
-    note={Version 5.7.1},
-    doi={https://doi.org/10.5281/zenodo.4025432},
-    year={2020}}
+    note={Version 5.10.0},
+    doi={https://doi.org/10.5281/zenodo.10896214},
+    year={2024}}

Please fill in the version number that you used, and its year, with the diff --git a/changes_to_master.html b/changes_to_master.html index a3626b71c..a0f038405 100644 --- a/changes_to_master.html +++ b/changes_to_master.html @@ -6,7 +6,7 @@ - Changes to master since v5.9.2 — Clawpack 5.10.x documentation + Changes to master since v5.10.0 — Clawpack 5.10.x documentation @@ -67,7 +67,7 @@

Navigation

modules |
  • Clawpack 5.10.x documentation »
    • -
  • Changes to master since v5.9.2
    • +
  • Changes to master since v5.10.0
    • @@ -76,10 +76,10 @@

    Navigation

    -
    -

    Changes to master since v5.9.2

    +
    +

    Changes to master since v5.10.0

    Follow the links to see changes that have been made to the master branch of -each repository since the last release (v5.9.2) on November 4, 2023.

    +each repository since the last release (v5.10.0) on March 29, 2024.

    These changes should appear in the next release. If you need them now, see Developers’ Guide for instructions on cloning and installing from the master branch.

    @@ -94,31 +94,31 @@

    General changes

    Changes to classic

    -

    See classic diffs

    +

    See classic diffs

    Changes to clawutil

    -

    See clawutil diffs

    +

    See clawutil diffs

    Changes to visclaw

    -

    See visclaw diffs

    +

    See visclaw diffs

    Changes to riemann

    -

    See riemann diffs

    +

    See riemann diffs

    Changes to amrclaw

    -

    See amrclaw diffs

    +

    See amrclaw diffs

    Changes to geoclaw

    -

    See geoclaw diffs

    +

    See geoclaw diffs

    Changes to PyClaw

    -

    See pyclaw diffs

    +

    See pyclaw diffs

    @@ -126,9 +126,9 @@

    Other Clawpack Repositories -

  • apps diffs

    • +

  • apps diffs

  • doc diffs

    • -

  • docker-files diffs

    • +

  • docker-files diffs

    • @@ -147,7 +147,7 @@

    Version 5.10.x

    Table of Contents

      -
    • Changes to master since v5.9.2
        +
      • Changes to master since v5.10.0
        • Changes that are not backward compatible
        • General changes
        • Changes to classic
          • diff --git a/dev/.buildinfo b/dev/.buildinfo index 95242fa76..568834a42 100644 --- a/dev/.buildinfo +++ b/dev/.buildinfo @@ -1,4 +1,4 @@ # Sphinx build info version 1 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done. -config: 647fdf8a6ae17c224f292b3caf037ba2 +config: 261a43d620e8cb9dbc7e51304364f141 tags: 645f666f9bcd5a90fca523b33c5a78b7 diff --git a/dev/.doctrees/ClawPlotAxes.doctree b/dev/.doctrees/ClawPlotAxes.doctree index a3ca7a3a7..77df15350 100644 Binary files a/dev/.doctrees/ClawPlotAxes.doctree and b/dev/.doctrees/ClawPlotAxes.doctree differ diff --git a/dev/.doctrees/ClawPlotData.doctree b/dev/.doctrees/ClawPlotData.doctree index 65032bd2b..889961f44 100644 Binary files a/dev/.doctrees/ClawPlotData.doctree and b/dev/.doctrees/ClawPlotData.doctree differ diff --git a/dev/.doctrees/ClawPlotFigure.doctree b/dev/.doctrees/ClawPlotFigure.doctree index 87ae5c18e..604903225 100644 Binary files a/dev/.doctrees/ClawPlotFigure.doctree and b/dev/.doctrees/ClawPlotFigure.doctree differ diff --git a/dev/.doctrees/ClawPlotItem.doctree b/dev/.doctrees/ClawPlotItem.doctree index 4b022e5b7..12c012722 100644 Binary files a/dev/.doctrees/ClawPlotItem.doctree and b/dev/.doctrees/ClawPlotItem.doctree differ diff --git a/dev/.doctrees/about.doctree b/dev/.doctrees/about.doctree index c12c7cd52..30926abac 100644 Binary files a/dev/.doctrees/about.doctree and b/dev/.doctrees/about.doctree differ diff --git a/dev/.doctrees/adjoint.doctree b/dev/.doctrees/adjoint.doctree index 10cab9745..640665cc3 100644 Binary files a/dev/.doctrees/adjoint.doctree and b/dev/.doctrees/adjoint.doctree differ diff --git a/dev/.doctrees/amr_algorithm.doctree b/dev/.doctrees/amr_algorithm.doctree index 5c5b6334b..2030e6086 100644 Binary files a/dev/.doctrees/amr_algorithm.doctree and b/dev/.doctrees/amr_algorithm.doctree differ diff --git a/dev/.doctrees/amrclaw.doctree b/dev/.doctrees/amrclaw.doctree index cc26bdbb0..f5d25cb1a 100644 Binary files a/dev/.doctrees/amrclaw.doctree and b/dev/.doctrees/amrclaw.doctree differ diff --git a/dev/.doctrees/amrclaw1d.doctree b/dev/.doctrees/amrclaw1d.doctree index d71ff9556..7aa007ae2 100644 Binary files a/dev/.doctrees/amrclaw1d.doctree and b/dev/.doctrees/amrclaw1d.doctree differ diff --git a/dev/.doctrees/amrclaw_doxygen.doctree b/dev/.doctrees/amrclaw_doxygen.doctree index 478ea9ed1..d0f8feefa 100644 Binary files a/dev/.doctrees/amrclaw_doxygen.doctree and b/dev/.doctrees/amrclaw_doxygen.doctree differ diff --git a/dev/.doctrees/amrclaw_flowcharts.doctree b/dev/.doctrees/amrclaw_flowcharts.doctree index d52a8c176..4b463bf95 100644 Binary files a/dev/.doctrees/amrclaw_flowcharts.doctree and b/dev/.doctrees/amrclaw_flowcharts.doctree differ diff --git a/dev/.doctrees/application_documentation.doctree b/dev/.doctrees/application_documentation.doctree index 322dd89a1..9f6dfbfa5 100644 Binary files a/dev/.doctrees/application_documentation.doctree and b/dev/.doctrees/application_documentation.doctree differ diff --git a/dev/.doctrees/apps.doctree b/dev/.doctrees/apps.doctree index 98518228e..d79af5a6e 100644 Binary files a/dev/.doctrees/apps.doctree and b/dev/.doctrees/apps.doctree differ diff --git a/dev/.doctrees/aws.doctree b/dev/.doctrees/aws.doctree index ca40d1b34..c4d550acd 100644 Binary files a/dev/.doctrees/aws.doctree and b/dev/.doctrees/aws.doctree differ diff --git a/dev/.doctrees/b4run.doctree b/dev/.doctrees/b4run.doctree index bb7813cf2..4e510485c 100644 Binary files a/dev/.doctrees/b4run.doctree and b/dev/.doctrees/b4run.doctree differ diff --git a/dev/.doctrees/b4step_defaults.doctree b/dev/.doctrees/b4step_defaults.doctree index e9ba7fd61..c4cf10e8f 100644 Binary files a/dev/.doctrees/b4step_defaults.doctree and b/dev/.doctrees/b4step_defaults.doctree differ diff --git a/dev/.doctrees/bc.doctree b/dev/.doctrees/bc.doctree index 56bf19b17..47d80ea5d 100644 Binary files a/dev/.doctrees/bc.doctree and b/dev/.doctrees/bc.doctree differ diff --git a/dev/.doctrees/biblio.doctree b/dev/.doctrees/biblio.doctree index d66228b62..8482e158c 100644 Binary files a/dev/.doctrees/biblio.doctree and b/dev/.doctrees/biblio.doctree differ diff --git a/dev/.doctrees/bouss1d.doctree b/dev/.doctrees/bouss1d.doctree index ba631361f..685084360 100644 Binary files a/dev/.doctrees/bouss1d.doctree and b/dev/.doctrees/bouss1d.doctree differ diff --git a/dev/.doctrees/bouss2d.doctree b/dev/.doctrees/bouss2d.doctree index af3da9a7e..66a9eea2e 100644 Binary files a/dev/.doctrees/bouss2d.doctree and b/dev/.doctrees/bouss2d.doctree differ diff --git a/dev/.doctrees/changes_to_master.doctree b/dev/.doctrees/changes_to_master.doctree index e20ba7fbb..887d1033a 100644 Binary files a/dev/.doctrees/changes_to_master.doctree and b/dev/.doctrees/changes_to_master.doctree differ diff --git a/dev/.doctrees/claw43to46.doctree b/dev/.doctrees/claw43to46.doctree index 774b1224c..16018217b 100644 Binary files a/dev/.doctrees/claw43to46.doctree and b/dev/.doctrees/claw43to46.doctree differ diff --git a/dev/.doctrees/claw46to50.doctree b/dev/.doctrees/claw46to50.doctree index 49000324e..f5a398a8b 100644 Binary files a/dev/.doctrees/claw46to50.doctree and b/dev/.doctrees/claw46to50.doctree differ diff --git a/dev/.doctrees/claw4x.doctree b/dev/.doctrees/claw4x.doctree index 19744e1a3..7dcf3f9e3 100644 Binary files a/dev/.doctrees/claw4x.doctree and b/dev/.doctrees/claw4x.doctree differ diff --git a/dev/.doctrees/clawpack5.doctree b/dev/.doctrees/clawpack5.doctree index c639e72fc..fead76126 100644 Binary files a/dev/.doctrees/clawpack5.doctree and b/dev/.doctrees/clawpack5.doctree differ diff --git a/dev/.doctrees/clawpack_components.doctree b/dev/.doctrees/clawpack_components.doctree index b6bd9e19f..69b003d4e 100644 Binary files a/dev/.doctrees/clawpack_components.doctree and b/dev/.doctrees/clawpack_components.doctree differ diff --git a/dev/.doctrees/community.doctree b/dev/.doctrees/community.doctree index 9a2ff6985..4b5541d24 100644 Binary files a/dev/.doctrees/community.doctree and b/dev/.doctrees/community.doctree differ diff --git a/dev/.doctrees/contents.doctree b/dev/.doctrees/contents.doctree index 8fe14b48c..e6ba1bd94 100644 Binary files a/dev/.doctrees/contents.doctree and b/dev/.doctrees/contents.doctree differ diff --git a/dev/.doctrees/contribute_apps.doctree b/dev/.doctrees/contribute_apps.doctree index a0c3ad9b2..8224e22a4 100644 Binary files a/dev/.doctrees/contribute_apps.doctree and b/dev/.doctrees/contribute_apps.doctree differ diff --git a/dev/.doctrees/current_data.doctree b/dev/.doctrees/current_data.doctree index 63afa9fd0..c6ddc8c2b 100644 Binary files a/dev/.doctrees/current_data.doctree and b/dev/.doctrees/current_data.doctree differ diff --git a/dev/.doctrees/developers.doctree b/dev/.doctrees/developers.doctree index 88dc17a8d..6b9e54a2b 100644 Binary files a/dev/.doctrees/developers.doctree and b/dev/.doctrees/developers.doctree differ diff --git a/dev/.doctrees/docker_image.doctree b/dev/.doctrees/docker_image.doctree index c87878b20..accd52071 100644 Binary files a/dev/.doctrees/docker_image.doctree and b/dev/.doctrees/docker_image.doctree differ diff --git a/dev/.doctrees/dtopotools_module.doctree b/dev/.doctrees/dtopotools_module.doctree index 4950d5ac9..8246a2720 100644 Binary files a/dev/.doctrees/dtopotools_module.doctree and b/dev/.doctrees/dtopotools_module.doctree differ diff --git a/dev/.doctrees/environment.pickle b/dev/.doctrees/environment.pickle index c4f4d06c9..2e66547b4 100644 Binary files a/dev/.doctrees/environment.pickle and b/dev/.doctrees/environment.pickle differ diff --git a/dev/.doctrees/f77_vs_f90.doctree b/dev/.doctrees/f77_vs_f90.doctree index 3b21ba538..ac23fec2f 100644 Binary files a/dev/.doctrees/f77_vs_f90.doctree and b/dev/.doctrees/f77_vs_f90.doctree differ diff --git a/dev/.doctrees/fgmax.doctree b/dev/.doctrees/fgmax.doctree index cbb213aa5..64c951e09 100644 Binary files a/dev/.doctrees/fgmax.doctree and b/dev/.doctrees/fgmax.doctree differ diff --git a/dev/.doctrees/fgmax_tools_module.doctree b/dev/.doctrees/fgmax_tools_module.doctree index 417b3df24..a920a57cc 100644 Binary files a/dev/.doctrees/fgmax_tools_module.doctree and b/dev/.doctrees/fgmax_tools_module.doctree differ diff --git a/dev/.doctrees/fgout.doctree b/dev/.doctrees/fgout.doctree index 2695a2625..05223d988 100644 Binary files a/dev/.doctrees/fgout.doctree and b/dev/.doctrees/fgout.doctree differ diff --git a/dev/.doctrees/fgout_tools_module.doctree b/dev/.doctrees/fgout_tools_module.doctree index df1fdc630..2362ec501 100644 Binary files a/dev/.doctrees/fgout_tools_module.doctree and b/dev/.doctrees/fgout_tools_module.doctree differ diff --git a/dev/.doctrees/first_run.doctree b/dev/.doctrees/first_run.doctree index 7977a859b..cd8e7cc16 100644 Binary files a/dev/.doctrees/first_run.doctree and b/dev/.doctrees/first_run.doctree differ diff --git a/dev/.doctrees/first_run_fortran.doctree b/dev/.doctrees/first_run_fortran.doctree index b11d39aaa..6e81ea4d2 100644 Binary files a/dev/.doctrees/first_run_fortran.doctree and b/dev/.doctrees/first_run_fortran.doctree differ diff --git a/dev/.doctrees/first_run_pyclaw.doctree b/dev/.doctrees/first_run_pyclaw.doctree index 1a0cee95a..f809b87ed 100644 Binary files a/dev/.doctrees/first_run_pyclaw.doctree and b/dev/.doctrees/first_run_pyclaw.doctree differ diff --git a/dev/.doctrees/flagregions.doctree b/dev/.doctrees/flagregions.doctree index 44f875c56..0c319313e 100644 Binary files a/dev/.doctrees/flagregions.doctree and b/dev/.doctrees/flagregions.doctree differ diff --git a/dev/.doctrees/force_dry.doctree b/dev/.doctrees/force_dry.doctree index 875228d85..a741534e4 100644 Binary files a/dev/.doctrees/force_dry.doctree and b/dev/.doctrees/force_dry.doctree differ diff --git a/dev/.doctrees/fortran.doctree b/dev/.doctrees/fortran.doctree index 37f9de672..b22f97a4b 100644 Binary files a/dev/.doctrees/fortran.doctree and b/dev/.doctrees/fortran.doctree differ diff --git a/dev/.doctrees/fortran_compilers.doctree b/dev/.doctrees/fortran_compilers.doctree index b56aea49f..4ecd807ce 100644 Binary files a/dev/.doctrees/fortran_compilers.doctree and b/dev/.doctrees/fortran_compilers.doctree differ diff --git a/dev/.doctrees/fvmbook.doctree b/dev/.doctrees/fvmbook.doctree index cb7dc644c..5b1799975 100644 Binary files a/dev/.doctrees/fvmbook.doctree and b/dev/.doctrees/fvmbook.doctree differ diff --git a/dev/.doctrees/galleries.doctree b/dev/.doctrees/galleries.doctree index fd0f42678..627ba94f6 100644 Binary files a/dev/.doctrees/galleries.doctree and b/dev/.doctrees/galleries.doctree differ diff --git a/dev/.doctrees/gauges.doctree b/dev/.doctrees/gauges.doctree index d184ada23..2884dbb7e 100644 Binary files a/dev/.doctrees/gauges.doctree and b/dev/.doctrees/gauges.doctree differ diff --git a/dev/.doctrees/geoclaw.doctree b/dev/.doctrees/geoclaw.doctree index 96146357b..643563373 100644 Binary files a/dev/.doctrees/geoclaw.doctree and b/dev/.doctrees/geoclaw.doctree differ diff --git a/dev/.doctrees/geoclaw1d.doctree b/dev/.doctrees/geoclaw1d.doctree index bd4ad5e02..12ca9f070 100644 Binary files a/dev/.doctrees/geoclaw1d.doctree and b/dev/.doctrees/geoclaw1d.doctree differ diff --git a/dev/.doctrees/geoclaw_started.doctree b/dev/.doctrees/geoclaw_started.doctree index c8331b5a1..dfd660309 100644 Binary files a/dev/.doctrees/geoclaw_started.doctree and b/dev/.doctrees/geoclaw_started.doctree differ diff --git a/dev/.doctrees/geoclaw_util_module.doctree b/dev/.doctrees/geoclaw_util_module.doctree index 33bc7ab75..c6d47bafa 100644 Binary files a/dev/.doctrees/geoclaw_util_module.doctree and b/dev/.doctrees/geoclaw_util_module.doctree differ diff --git a/dev/.doctrees/geohints.doctree b/dev/.doctrees/geohints.doctree index d02b5c5ea..1f7fd7fec 100644 Binary files a/dev/.doctrees/geohints.doctree and b/dev/.doctrees/geohints.doctree differ diff --git a/dev/.doctrees/geoplot.doctree b/dev/.doctrees/geoplot.doctree index ab51bf5cd..3d4e7e4c1 100644 Binary files a/dev/.doctrees/geoplot.doctree and b/dev/.doctrees/geoplot.doctree differ diff --git a/dev/.doctrees/git_versions.doctree b/dev/.doctrees/git_versions.doctree index 473c8767c..cc7696376 100644 Binary files a/dev/.doctrees/git_versions.doctree and b/dev/.doctrees/git_versions.doctree differ diff --git a/dev/.doctrees/googleearth_plotting.doctree b/dev/.doctrees/googleearth_plotting.doctree index 820f11341..5e5485a06 100644 Binary files a/dev/.doctrees/googleearth_plotting.doctree and b/dev/.doctrees/googleearth_plotting.doctree differ diff --git a/dev/.doctrees/gpu.doctree b/dev/.doctrees/gpu.doctree index 07cdc528b..aca37482b 100644 Binary files a/dev/.doctrees/gpu.doctree and b/dev/.doctrees/gpu.doctree differ diff --git a/dev/.doctrees/grid_registration.doctree b/dev/.doctrees/grid_registration.doctree index e865deae3..cb8ec16a6 100644 Binary files a/dev/.doctrees/grid_registration.doctree and b/dev/.doctrees/grid_registration.doctree differ diff --git a/dev/.doctrees/howto_doc.doctree b/dev/.doctrees/howto_doc.doctree index af1edee38..39575c488 100644 Binary files a/dev/.doctrees/howto_doc.doctree and b/dev/.doctrees/howto_doc.doctree differ diff --git a/dev/.doctrees/howto_release.doctree b/dev/.doctrees/howto_release.doctree index 4053c0917..05a812639 100644 Binary files a/dev/.doctrees/howto_release.doctree and b/dev/.doctrees/howto_release.doctree differ diff --git a/dev/.doctrees/installing.doctree b/dev/.doctrees/installing.doctree index 1e3ece505..bfffa4e44 100644 Binary files a/dev/.doctrees/installing.doctree and b/dev/.doctrees/installing.doctree differ diff --git a/dev/.doctrees/installing_fortcodes.doctree b/dev/.doctrees/installing_fortcodes.doctree index b832c0d2d..90b521738 100644 Binary files a/dev/.doctrees/installing_fortcodes.doctree and b/dev/.doctrees/installing_fortcodes.doctree differ diff --git a/dev/.doctrees/installing_pip.doctree b/dev/.doctrees/installing_pip.doctree index 1eb193c01..f8f9cff9f 100644 Binary files a/dev/.doctrees/installing_pip.doctree and b/dev/.doctrees/installing_pip.doctree differ diff --git a/dev/.doctrees/kmltools_module.doctree b/dev/.doctrees/kmltools_module.doctree index bdd8b6984..91617dea6 100644 Binary files a/dev/.doctrees/kmltools_module.doctree and b/dev/.doctrees/kmltools_module.doctree differ diff --git a/dev/.doctrees/lagrangian_gauges.doctree b/dev/.doctrees/lagrangian_gauges.doctree index 063f92604..7b5583329 100644 Binary files a/dev/.doctrees/lagrangian_gauges.doctree and b/dev/.doctrees/lagrangian_gauges.doctree differ diff --git a/dev/.doctrees/license.doctree b/dev/.doctrees/license.doctree index 82f616877..d36f0e8d1 100644 Binary files a/dev/.doctrees/license.doctree and b/dev/.doctrees/license.doctree differ diff --git a/dev/.doctrees/makefiles.doctree b/dev/.doctrees/makefiles.doctree index e814b320e..3cd9e186f 100644 Binary files a/dev/.doctrees/makefiles.doctree and b/dev/.doctrees/makefiles.doctree differ diff --git a/dev/.doctrees/makefiles_library.doctree b/dev/.doctrees/makefiles_library.doctree index ae6d1841a..c7f305b21 100644 Binary files a/dev/.doctrees/makefiles_library.doctree and b/dev/.doctrees/makefiles_library.doctree differ diff --git a/dev/.doctrees/manning.doctree b/dev/.doctrees/manning.doctree index 58ad67c43..a91d6b15a 100644 Binary files a/dev/.doctrees/manning.doctree and b/dev/.doctrees/manning.doctree differ diff --git a/dev/.doctrees/mapc2p.doctree b/dev/.doctrees/mapc2p.doctree index 605bd34d0..a849798b3 100644 Binary files a/dev/.doctrees/mapc2p.doctree and b/dev/.doctrees/mapc2p.doctree differ diff --git a/dev/.doctrees/marching_front.doctree b/dev/.doctrees/marching_front.doctree index 90b070fa2..39065a41e 100644 Binary files a/dev/.doctrees/marching_front.doctree and b/dev/.doctrees/marching_front.doctree differ diff --git a/dev/.doctrees/matlab_plotting.doctree b/dev/.doctrees/matlab_plotting.doctree index 6c624d4f7..f076afa08 100644 Binary files a/dev/.doctrees/matlab_plotting.doctree and b/dev/.doctrees/matlab_plotting.doctree differ diff --git a/dev/.doctrees/nearshore_interp.doctree b/dev/.doctrees/nearshore_interp.doctree index 3cee3b67f..9fd88b6e9 100644 Binary files a/dev/.doctrees/nearshore_interp.doctree and b/dev/.doctrees/nearshore_interp.doctree differ diff --git a/dev/.doctrees/netcdf.doctree b/dev/.doctrees/netcdf.doctree index 48d735856..e911ab1ba 100644 Binary files a/dev/.doctrees/netcdf.doctree and b/dev/.doctrees/netcdf.doctree differ diff --git a/dev/.doctrees/newapp.doctree b/dev/.doctrees/newapp.doctree index 2caf2b86c..8bb76f0d2 100644 Binary files a/dev/.doctrees/newapp.doctree and b/dev/.doctrees/newapp.doctree differ diff --git a/dev/.doctrees/okada.doctree b/dev/.doctrees/okada.doctree index db96387bf..047467dfc 100644 Binary files a/dev/.doctrees/okada.doctree and b/dev/.doctrees/okada.doctree differ diff --git a/dev/.doctrees/openmp.doctree b/dev/.doctrees/openmp.doctree index c5a8c89f8..95c171269 100644 Binary files a/dev/.doctrees/openmp.doctree and b/dev/.doctrees/openmp.doctree differ diff --git a/dev/.doctrees/output_styles.doctree b/dev/.doctrees/output_styles.doctree index 652b12b42..fa0c97f01 100644 Binary files a/dev/.doctrees/output_styles.doctree and b/dev/.doctrees/output_styles.doctree differ diff --git a/dev/.doctrees/packages.doctree b/dev/.doctrees/packages.doctree index d50be52ee..321d31949 100644 Binary files a/dev/.doctrees/packages.doctree and b/dev/.doctrees/packages.doctree differ diff --git a/dev/.doctrees/photos.doctree b/dev/.doctrees/photos.doctree index dd3765fea..ae681ae2b 100644 Binary files a/dev/.doctrees/photos.doctree and b/dev/.doctrees/photos.doctree differ diff --git a/dev/.doctrees/plotexamples.doctree b/dev/.doctrees/plotexamples.doctree index 44ed5c78d..aabde93ad 100644 Binary files a/dev/.doctrees/plotexamples.doctree and b/dev/.doctrees/plotexamples.doctree differ diff --git a/dev/.doctrees/plotting.doctree b/dev/.doctrees/plotting.doctree index da6bf681b..ff7e13034 100644 Binary files a/dev/.doctrees/plotting.doctree and b/dev/.doctrees/plotting.doctree differ diff --git a/dev/.doctrees/plotting_faq.doctree b/dev/.doctrees/plotting_faq.doctree index 7b24d827d..a3db29abc 100644 Binary files a/dev/.doctrees/plotting_faq.doctree and b/dev/.doctrees/plotting_faq.doctree differ diff --git a/dev/.doctrees/plotting_geoclaw.doctree b/dev/.doctrees/plotting_geoclaw.doctree index b2a29f6d2..77aa4f670 100644 Binary files a/dev/.doctrees/plotting_geoclaw.doctree and b/dev/.doctrees/plotting_geoclaw.doctree differ diff --git a/dev/.doctrees/plotting_python.doctree b/dev/.doctrees/plotting_python.doctree index d1aea76b4..0278bf88d 100644 Binary files a/dev/.doctrees/plotting_python.doctree and b/dev/.doctrees/plotting_python.doctree differ diff --git a/dev/.doctrees/prereqs.doctree b/dev/.doctrees/prereqs.doctree index 57e05dfc0..e698a6309 100644 Binary files a/dev/.doctrees/prereqs.doctree and b/dev/.doctrees/prereqs.doctree differ diff --git a/dev/.doctrees/pyclaw/about.doctree b/dev/.doctrees/pyclaw/about.doctree index e34cb5aa2..7b96bc466 100644 Binary files a/dev/.doctrees/pyclaw/about.doctree and b/dev/.doctrees/pyclaw/about.doctree differ diff --git a/dev/.doctrees/pyclaw/basics.doctree b/dev/.doctrees/pyclaw/basics.doctree index b67e3d5b9..1bf478a87 100644 Binary files a/dev/.doctrees/pyclaw/basics.doctree and b/dev/.doctrees/pyclaw/basics.doctree differ diff --git a/dev/.doctrees/pyclaw/classes.doctree b/dev/.doctrees/pyclaw/classes.doctree index e3a65e142..226824d45 100644 Binary files a/dev/.doctrees/pyclaw/classes.doctree and b/dev/.doctrees/pyclaw/classes.doctree differ diff --git a/dev/.doctrees/pyclaw/clawpack_and_pyclaw.doctree b/dev/.doctrees/pyclaw/clawpack_and_pyclaw.doctree index 5a62e7794..94a5fa7a9 100644 Binary files a/dev/.doctrees/pyclaw/clawpack_and_pyclaw.doctree and b/dev/.doctrees/pyclaw/clawpack_and_pyclaw.doctree differ diff --git a/dev/.doctrees/pyclaw/cloud.doctree b/dev/.doctrees/pyclaw/cloud.doctree index f1dc3d909..87f3ad9dd 100644 Binary files a/dev/.doctrees/pyclaw/cloud.doctree and b/dev/.doctrees/pyclaw/cloud.doctree differ diff --git a/dev/.doctrees/pyclaw/controller.doctree b/dev/.doctrees/pyclaw/controller.doctree index 03bab35a8..426fb50e5 100644 Binary files a/dev/.doctrees/pyclaw/controller.doctree and b/dev/.doctrees/pyclaw/controller.doctree differ diff --git a/dev/.doctrees/pyclaw/evolve/limiters.doctree b/dev/.doctrees/pyclaw/evolve/limiters.doctree index 6f50c3092..e6695e965 100644 Binary files a/dev/.doctrees/pyclaw/evolve/limiters.doctree and b/dev/.doctrees/pyclaw/evolve/limiters.doctree differ diff --git a/dev/.doctrees/pyclaw/examples.doctree b/dev/.doctrees/pyclaw/examples.doctree index 17d852928..a2ce815c7 100644 Binary files a/dev/.doctrees/pyclaw/examples.doctree and b/dev/.doctrees/pyclaw/examples.doctree differ diff --git a/dev/.doctrees/pyclaw/geometry.doctree b/dev/.doctrees/pyclaw/geometry.doctree index cdc63c5ae..4ceb2bfb7 100644 Binary files a/dev/.doctrees/pyclaw/geometry.doctree and b/dev/.doctrees/pyclaw/geometry.doctree differ diff --git a/dev/.doctrees/pyclaw/going_further.doctree b/dev/.doctrees/pyclaw/going_further.doctree index cbf2f1216..73c74ca0f 100644 Binary files a/dev/.doctrees/pyclaw/going_further.doctree and b/dev/.doctrees/pyclaw/going_further.doctree differ diff --git a/dev/.doctrees/pyclaw/index.doctree b/dev/.doctrees/pyclaw/index.doctree index 0949b2dc3..ae7f9dfed 100644 Binary files a/dev/.doctrees/pyclaw/index.doctree and b/dev/.doctrees/pyclaw/index.doctree differ diff --git a/dev/.doctrees/pyclaw/io.doctree b/dev/.doctrees/pyclaw/io.doctree index e2fcde2ed..c67ebb880 100644 Binary files a/dev/.doctrees/pyclaw/io.doctree and b/dev/.doctrees/pyclaw/io.doctree differ diff --git a/dev/.doctrees/pyclaw/output.doctree b/dev/.doctrees/pyclaw/output.doctree index fd6d04258..8b3e8beeb 100644 Binary files a/dev/.doctrees/pyclaw/output.doctree and b/dev/.doctrees/pyclaw/output.doctree differ diff --git a/dev/.doctrees/pyclaw/parallel.doctree b/dev/.doctrees/pyclaw/parallel.doctree index 8e27f4c66..a95227ac2 100644 Binary files a/dev/.doctrees/pyclaw/parallel.doctree and b/dev/.doctrees/pyclaw/parallel.doctree differ diff --git a/dev/.doctrees/pyclaw/plotting.doctree b/dev/.doctrees/pyclaw/plotting.doctree index 35102e575..c9d024b15 100644 Binary files a/dev/.doctrees/pyclaw/plotting.doctree and b/dev/.doctrees/pyclaw/plotting.doctree differ diff --git a/dev/.doctrees/pyclaw/problem.doctree b/dev/.doctrees/pyclaw/problem.doctree index 55453545e..a4a9f6eb9 100644 Binary files a/dev/.doctrees/pyclaw/problem.doctree and b/dev/.doctrees/pyclaw/problem.doctree differ diff --git a/dev/.doctrees/pyclaw/rp.doctree b/dev/.doctrees/pyclaw/rp.doctree index 100bc2097..65a952ae8 100644 Binary files a/dev/.doctrees/pyclaw/rp.doctree and b/dev/.doctrees/pyclaw/rp.doctree differ diff --git a/dev/.doctrees/pyclaw/solution.doctree b/dev/.doctrees/pyclaw/solution.doctree index 3f5518388..8d64c42ab 100644 Binary files a/dev/.doctrees/pyclaw/solution.doctree and b/dev/.doctrees/pyclaw/solution.doctree differ diff --git a/dev/.doctrees/pyclaw/solvers.doctree b/dev/.doctrees/pyclaw/solvers.doctree index d5ea19839..ef92225ca 100644 Binary files a/dev/.doctrees/pyclaw/solvers.doctree and b/dev/.doctrees/pyclaw/solvers.doctree differ diff --git a/dev/.doctrees/pyclaw/started.doctree b/dev/.doctrees/pyclaw/started.doctree index 3e02df73e..24689a83e 100644 Binary files a/dev/.doctrees/pyclaw/started.doctree and b/dev/.doctrees/pyclaw/started.doctree differ diff --git a/dev/.doctrees/pyclaw/state.doctree b/dev/.doctrees/pyclaw/state.doctree index f68fc8c7a..b2f5d607b 100644 Binary files a/dev/.doctrees/pyclaw/state.doctree and b/dev/.doctrees/pyclaw/state.doctree differ diff --git a/dev/.doctrees/pyclaw/troubleshooting.doctree b/dev/.doctrees/pyclaw/troubleshooting.doctree index c003e2bf5..c0dd77968 100644 Binary files a/dev/.doctrees/pyclaw/troubleshooting.doctree and b/dev/.doctrees/pyclaw/troubleshooting.doctree differ diff --git a/dev/.doctrees/pyclaw/tutorial.doctree b/dev/.doctrees/pyclaw/tutorial.doctree index 5026a129d..6eda49219 100644 Binary files a/dev/.doctrees/pyclaw/tutorial.doctree and b/dev/.doctrees/pyclaw/tutorial.doctree differ diff --git a/dev/.doctrees/pyclaw/util.doctree b/dev/.doctrees/pyclaw/util.doctree index c4b4f8f5e..41c7d915d 100644 Binary files a/dev/.doctrees/pyclaw/util.doctree and b/dev/.doctrees/pyclaw/util.doctree differ diff --git a/dev/.doctrees/python.doctree b/dev/.doctrees/python.doctree index c98f765e5..07250ab3e 100644 Binary files a/dev/.doctrees/python.doctree and b/dev/.doctrees/python.doctree differ diff --git a/dev/.doctrees/python_path.doctree b/dev/.doctrees/python_path.doctree index b5271336f..0a28f0eb5 100644 Binary files a/dev/.doctrees/python_path.doctree and b/dev/.doctrees/python_path.doctree differ diff --git a/dev/.doctrees/qinit_defaults.doctree b/dev/.doctrees/qinit_defaults.doctree index bb55c3487..5b559ce28 100644 Binary files a/dev/.doctrees/qinit_defaults.doctree and b/dev/.doctrees/qinit_defaults.doctree differ diff --git a/dev/.doctrees/quick_surge.doctree b/dev/.doctrees/quick_surge.doctree index 744eb9338..97dc79bcf 100644 Binary files a/dev/.doctrees/quick_surge.doctree and b/dev/.doctrees/quick_surge.doctree differ diff --git a/dev/.doctrees/quick_tsunami.doctree b/dev/.doctrees/quick_tsunami.doctree index 0313da352..6bf01cbca 100644 Binary files a/dev/.doctrees/quick_tsunami.doctree and b/dev/.doctrees/quick_tsunami.doctree differ diff --git a/dev/.doctrees/refinement.doctree b/dev/.doctrees/refinement.doctree index 2616f19db..6a5b77d38 100644 Binary files a/dev/.doctrees/refinement.doctree and b/dev/.doctrees/refinement.doctree differ diff --git a/dev/.doctrees/regression.doctree b/dev/.doctrees/regression.doctree index fb48b5ed5..93e1edea5 100644 Binary files a/dev/.doctrees/regression.doctree and b/dev/.doctrees/regression.doctree differ diff --git a/dev/.doctrees/release_5_0_0.doctree b/dev/.doctrees/release_5_0_0.doctree index 28aa5c007..b02273a78 100644 Binary files a/dev/.doctrees/release_5_0_0.doctree and b/dev/.doctrees/release_5_0_0.doctree differ diff --git a/dev/.doctrees/release_5_10_0.doctree b/dev/.doctrees/release_5_10_0.doctree index ae12d3e3f..b123a1561 100644 Binary files a/dev/.doctrees/release_5_10_0.doctree and b/dev/.doctrees/release_5_10_0.doctree differ diff --git a/dev/.doctrees/release_5_1_0.doctree b/dev/.doctrees/release_5_1_0.doctree index aead97f33..a5837ae45 100644 Binary files a/dev/.doctrees/release_5_1_0.doctree and b/dev/.doctrees/release_5_1_0.doctree differ diff --git a/dev/.doctrees/release_5_2_0.doctree b/dev/.doctrees/release_5_2_0.doctree index 4d03ae8a1..586a17120 100644 Binary files a/dev/.doctrees/release_5_2_0.doctree and b/dev/.doctrees/release_5_2_0.doctree differ diff --git a/dev/.doctrees/release_5_2_1.doctree b/dev/.doctrees/release_5_2_1.doctree index 87c18f8ca..bfadd1bad 100644 Binary files a/dev/.doctrees/release_5_2_1.doctree and b/dev/.doctrees/release_5_2_1.doctree differ diff --git a/dev/.doctrees/release_5_2_2.doctree b/dev/.doctrees/release_5_2_2.doctree index 1c62421e7..2de5fe883 100644 Binary files a/dev/.doctrees/release_5_2_2.doctree and b/dev/.doctrees/release_5_2_2.doctree differ diff --git a/dev/.doctrees/release_5_3_0.doctree b/dev/.doctrees/release_5_3_0.doctree index f73efcd3b..b7e8abb11 100644 Binary files a/dev/.doctrees/release_5_3_0.doctree and b/dev/.doctrees/release_5_3_0.doctree differ diff --git a/dev/.doctrees/release_5_3_1.doctree b/dev/.doctrees/release_5_3_1.doctree index 4f769f5dc..b6a04a5fc 100644 Binary files a/dev/.doctrees/release_5_3_1.doctree and b/dev/.doctrees/release_5_3_1.doctree differ diff --git a/dev/.doctrees/release_5_4_0.doctree b/dev/.doctrees/release_5_4_0.doctree index dd8e4c210..7686c13b3 100644 Binary files a/dev/.doctrees/release_5_4_0.doctree and b/dev/.doctrees/release_5_4_0.doctree differ diff --git a/dev/.doctrees/release_5_4_1.doctree b/dev/.doctrees/release_5_4_1.doctree index 5e17ef397..c699d36fd 100644 Binary files a/dev/.doctrees/release_5_4_1.doctree and b/dev/.doctrees/release_5_4_1.doctree differ diff --git a/dev/.doctrees/release_5_5_0.doctree b/dev/.doctrees/release_5_5_0.doctree index 2163aae43..ebe81255f 100644 Binary files a/dev/.doctrees/release_5_5_0.doctree and b/dev/.doctrees/release_5_5_0.doctree differ diff --git a/dev/.doctrees/release_5_6_0.doctree b/dev/.doctrees/release_5_6_0.doctree index 3591a4793..bd4cbddb3 100644 Binary files a/dev/.doctrees/release_5_6_0.doctree and b/dev/.doctrees/release_5_6_0.doctree differ diff --git a/dev/.doctrees/release_5_6_1.doctree b/dev/.doctrees/release_5_6_1.doctree index d7e2fad9f..8d2e515d7 100644 Binary files a/dev/.doctrees/release_5_6_1.doctree and b/dev/.doctrees/release_5_6_1.doctree differ diff --git a/dev/.doctrees/release_5_7_0.doctree b/dev/.doctrees/release_5_7_0.doctree index 88a3293b5..2f50f48dc 100644 Binary files a/dev/.doctrees/release_5_7_0.doctree and b/dev/.doctrees/release_5_7_0.doctree differ diff --git a/dev/.doctrees/release_5_7_1.doctree b/dev/.doctrees/release_5_7_1.doctree index 5eadeece7..137de8893 100644 Binary files a/dev/.doctrees/release_5_7_1.doctree and b/dev/.doctrees/release_5_7_1.doctree differ diff --git a/dev/.doctrees/release_5_8_0.doctree b/dev/.doctrees/release_5_8_0.doctree index 7d70f7d49..f27f87859 100644 Binary files a/dev/.doctrees/release_5_8_0.doctree and b/dev/.doctrees/release_5_8_0.doctree differ diff --git a/dev/.doctrees/release_5_8_1.doctree b/dev/.doctrees/release_5_8_1.doctree index f312d070c..e3b07f343 100644 Binary files a/dev/.doctrees/release_5_8_1.doctree and b/dev/.doctrees/release_5_8_1.doctree differ diff --git a/dev/.doctrees/release_5_8_2.doctree b/dev/.doctrees/release_5_8_2.doctree index f60fa440d..e68d7d057 100644 Binary files a/dev/.doctrees/release_5_8_2.doctree and b/dev/.doctrees/release_5_8_2.doctree differ diff --git a/dev/.doctrees/release_5_9_0.doctree b/dev/.doctrees/release_5_9_0.doctree index e304ad964..fc8fe7d2f 100644 Binary files a/dev/.doctrees/release_5_9_0.doctree and b/dev/.doctrees/release_5_9_0.doctree differ diff --git a/dev/.doctrees/release_5_9_1.doctree b/dev/.doctrees/release_5_9_1.doctree index aca706547..9b666af37 100644 Binary files a/dev/.doctrees/release_5_9_1.doctree and b/dev/.doctrees/release_5_9_1.doctree differ diff --git a/dev/.doctrees/release_5_9_2.doctree b/dev/.doctrees/release_5_9_2.doctree index 512a6da03..743f3db85 100644 Binary files a/dev/.doctrees/release_5_9_2.doctree and b/dev/.doctrees/release_5_9_2.doctree differ diff --git a/dev/.doctrees/releases.doctree b/dev/.doctrees/releases.doctree index 4953bd249..ee99bff9c 100644 Binary files a/dev/.doctrees/releases.doctree and b/dev/.doctrees/releases.doctree differ diff --git a/dev/.doctrees/restart.doctree b/dev/.doctrees/restart.doctree index 9b051467a..50203a3e8 100644 Binary files a/dev/.doctrees/restart.doctree and b/dev/.doctrees/restart.doctree differ diff --git a/dev/.doctrees/riemann.doctree b/dev/.doctrees/riemann.doctree index 92c9822ff..a6dee7aa3 100644 Binary files a/dev/.doctrees/riemann.doctree and b/dev/.doctrees/riemann.doctree differ diff --git a/dev/.doctrees/riemann/Shallow_water_Riemann_solvers.doctree b/dev/.doctrees/riemann/Shallow_water_Riemann_solvers.doctree index 58e16ab80..46dfbb743 100644 Binary files a/dev/.doctrees/riemann/Shallow_water_Riemann_solvers.doctree and b/dev/.doctrees/riemann/Shallow_water_Riemann_solvers.doctree differ diff --git a/dev/.doctrees/ruled_rectangles.doctree b/dev/.doctrees/ruled_rectangles.doctree index 76685c041..2fad6e9fd 100644 Binary files a/dev/.doctrees/ruled_rectangles.doctree and b/dev/.doctrees/ruled_rectangles.doctree differ diff --git a/dev/.doctrees/sealevel.doctree b/dev/.doctrees/sealevel.doctree index 563325694..e029e3f4b 100644 Binary files a/dev/.doctrees/sealevel.doctree and b/dev/.doctrees/sealevel.doctree differ diff --git a/dev/.doctrees/set_eta_init.doctree b/dev/.doctrees/set_eta_init.doctree index 0b9db3e89..89dfa403c 100644 Binary files a/dev/.doctrees/set_eta_init.doctree and b/dev/.doctrees/set_eta_init.doctree differ diff --git a/dev/.doctrees/setaux_defaults.doctree b/dev/.doctrees/setaux_defaults.doctree index 5afafdc2f..3140f8bd5 100644 Binary files a/dev/.doctrees/setaux_defaults.doctree and b/dev/.doctrees/setaux_defaults.doctree differ diff --git a/dev/.doctrees/setenv.doctree b/dev/.doctrees/setenv.doctree index 194e37e06..142ea8f4f 100644 Binary files a/dev/.doctrees/setenv.doctree and b/dev/.doctrees/setenv.doctree differ diff --git a/dev/.doctrees/setplot.doctree b/dev/.doctrees/setplot.doctree index 396edcaf6..f6e9f9a96 100644 Binary files a/dev/.doctrees/setplot.doctree and b/dev/.doctrees/setplot.doctree differ diff --git a/dev/.doctrees/setrun.doctree b/dev/.doctrees/setrun.doctree index fdeb8481f..c91f72abd 100644 Binary files a/dev/.doctrees/setrun.doctree and b/dev/.doctrees/setrun.doctree differ diff --git a/dev/.doctrees/setrun_amrclaw.doctree b/dev/.doctrees/setrun_amrclaw.doctree index d296f50a2..9520b2da9 100644 Binary files a/dev/.doctrees/setrun_amrclaw.doctree and b/dev/.doctrees/setrun_amrclaw.doctree differ diff --git a/dev/.doctrees/setrun_amrclaw_sample.doctree b/dev/.doctrees/setrun_amrclaw_sample.doctree index 171cd7fba..ac5166366 100644 Binary files a/dev/.doctrees/setrun_amrclaw_sample.doctree and b/dev/.doctrees/setrun_amrclaw_sample.doctree differ diff --git a/dev/.doctrees/setrun_geoclaw.doctree b/dev/.doctrees/setrun_geoclaw.doctree index 1f2fa2be3..2397efa62 100644 Binary files a/dev/.doctrees/setrun_geoclaw.doctree and b/dev/.doctrees/setrun_geoclaw.doctree differ diff --git a/dev/.doctrees/setrun_sample.doctree b/dev/.doctrees/setrun_sample.doctree index 0b586fc78..fbbd05cc2 100644 Binary files a/dev/.doctrees/setrun_sample.doctree and b/dev/.doctrees/setrun_sample.doctree differ diff --git a/dev/.doctrees/sharing.doctree b/dev/.doctrees/sharing.doctree index c7cf6fc9f..0daf9ab59 100644 Binary files a/dev/.doctrees/sharing.doctree and b/dev/.doctrees/sharing.doctree differ diff --git a/dev/.doctrees/sphere_source.doctree b/dev/.doctrees/sphere_source.doctree index 785010c70..41416988d 100644 Binary files a/dev/.doctrees/sphere_source.doctree and b/dev/.doctrees/sphere_source.doctree differ diff --git a/dev/.doctrees/sphinxdoc.doctree b/dev/.doctrees/sphinxdoc.doctree index 324e0232a..c03414413 100644 Binary files a/dev/.doctrees/sphinxdoc.doctree and b/dev/.doctrees/sphinxdoc.doctree differ diff --git a/dev/.doctrees/src1d_defaults.doctree b/dev/.doctrees/src1d_defaults.doctree index 3ffb1a00f..8fede9249 100644 Binary files a/dev/.doctrees/src1d_defaults.doctree and b/dev/.doctrees/src1d_defaults.doctree differ diff --git a/dev/.doctrees/src_defaults.doctree b/dev/.doctrees/src_defaults.doctree index 5371270c4..83412d5a5 100644 Binary files a/dev/.doctrees/src_defaults.doctree and b/dev/.doctrees/src_defaults.doctree differ diff --git a/dev/.doctrees/storm_module.doctree b/dev/.doctrees/storm_module.doctree index 280e14f35..e1cdd54c1 100644 Binary files a/dev/.doctrees/storm_module.doctree and b/dev/.doctrees/storm_module.doctree differ diff --git a/dev/.doctrees/surgedata.doctree b/dev/.doctrees/surgedata.doctree index 96d54fde2..ffc7926ef 100644 Binary files a/dev/.doctrees/surgedata.doctree and b/dev/.doctrees/surgedata.doctree differ diff --git a/dev/.doctrees/testing.doctree b/dev/.doctrees/testing.doctree index 7faa7ef29..7d647ed50 100644 Binary files a/dev/.doctrees/testing.doctree and b/dev/.doctrees/testing.doctree differ diff --git a/dev/.doctrees/timing.doctree b/dev/.doctrees/timing.doctree index 75b7ededf..70448e015 100644 Binary files a/dev/.doctrees/timing.doctree and b/dev/.doctrees/timing.doctree differ diff --git a/dev/.doctrees/topo.doctree b/dev/.doctrees/topo.doctree index 807c756be..dfef2fe1e 100644 Binary files a/dev/.doctrees/topo.doctree and b/dev/.doctrees/topo.doctree differ diff --git a/dev/.doctrees/topotools.doctree b/dev/.doctrees/topotools.doctree index 7fd5af8b9..6082b4015 100644 Binary files a/dev/.doctrees/topotools.doctree and b/dev/.doctrees/topotools.doctree differ diff --git a/dev/.doctrees/topotools_module.doctree b/dev/.doctrees/topotools_module.doctree index 090829f1d..f9ca88527 100644 Binary files a/dev/.doctrees/topotools_module.doctree and b/dev/.doctrees/topotools_module.doctree differ diff --git a/dev/.doctrees/trouble.doctree b/dev/.doctrees/trouble.doctree index 9610299d3..324cd6c76 100644 Binary files a/dev/.doctrees/trouble.doctree and b/dev/.doctrees/trouble.doctree differ diff --git a/dev/.doctrees/tsunamidata.doctree b/dev/.doctrees/tsunamidata.doctree index 74ff5687a..83a41c284 100644 Binary files a/dev/.doctrees/tsunamidata.doctree and b/dev/.doctrees/tsunamidata.doctree differ diff --git a/dev/.doctrees/user_routines.doctree b/dev/.doctrees/user_routines.doctree index 913156ecf..eef90a030 100644 Binary files a/dev/.doctrees/user_routines.doctree and b/dev/.doctrees/user_routines.doctree differ diff --git a/dev/.doctrees/visit_plotting.doctree b/dev/.doctrees/visit_plotting.doctree index cb3581101..d52c5e665 100644 Binary files a/dev/.doctrees/visit_plotting.doctree and b/dev/.doctrees/visit_plotting.doctree differ diff --git a/dev/.doctrees/vm.doctree b/dev/.doctrees/vm.doctree index bf8fd72c3..0b7e08db2 100644 Binary files a/dev/.doctrees/vm.doctree and b/dev/.doctrees/vm.doctree differ diff --git a/dev/.doctrees/wp_algorithms.doctree b/dev/.doctrees/wp_algorithms.doctree index bc42a836f..980be3cd2 100644 Binary files a/dev/.doctrees/wp_algorithms.doctree and b/dev/.doctrees/wp_algorithms.doctree differ diff --git a/dev/ClawPlotAxes.html b/dev/ClawPlotAxes.html index 65d29193d..7a0c12a96 100644 --- a/dev/ClawPlotAxes.html +++ b/dev/ClawPlotAxes.html @@ -6,7 +6,7 @@ - ClawPlotAxes — Clawpack 5.10.x documentation + ClawPlotAxes — Clawpack dev documentation @@ -74,7 +74,7 @@

          Navigation

        • previous |
          • -
        • Clawpack 5.10.x documentation »
          • +
        • Clawpack dev documentation »
        • Plotting with Visclaw »
        • Using setplot.py to specify the desired plots »
        • ClawPlotAxes
          • @@ -420,7 +420,7 @@

          Methods -

          Version 5.10.x

          +

          Version dev

          Table of Contents

          diff --git a/dev/ClawPlotData.html b/dev/ClawPlotData.html index 15f157f23..54a934575 100644 --- a/dev/ClawPlotData.html +++ b/dev/ClawPlotData.html @@ -6,7 +6,7 @@ - ClawPlotData — Clawpack 5.10.x documentation + ClawPlotData — Clawpack dev documentation @@ -74,7 +74,7 @@

          Navigation

        • previous |
          • -
        • Clawpack 5.10.x documentation »
          • +
        • Clawpack dev documentation »
        • Plotting with Visclaw »
        • Using setplot.py to specify the desired plots »
        • ClawPlotData
          • @@ -335,7 +335,7 @@

          Methods -

          Version 5.10.x

          +

          Version dev

          Table of Contents

          diff --git a/dev/ClawPlotFigure.html b/dev/ClawPlotFigure.html index a040eadac..86d955d15 100644 --- a/dev/ClawPlotFigure.html +++ b/dev/ClawPlotFigure.html @@ -6,7 +6,7 @@ - ClawPlotFigure — Clawpack 5.10.x documentation + ClawPlotFigure — Clawpack dev documentation @@ -74,7 +74,7 @@

          Navigation

        • previous |
          • -
        • Clawpack 5.10.x documentation »
          • +
        • Clawpack dev documentation »
        • Plotting with Visclaw »
        • Using setplot.py to specify the desired plots »
        • ClawPlotFigure
          • @@ -185,7 +185,7 @@

          Methods -

          Version 5.10.x

          +

          Version dev

          Table of Contents

          diff --git a/dev/ClawPlotItem.html b/dev/ClawPlotItem.html index 9ded62704..7f71f4765 100644 --- a/dev/ClawPlotItem.html +++ b/dev/ClawPlotItem.html @@ -6,7 +6,7 @@ - ClawPlotItem — Clawpack 5.10.x documentation + ClawPlotItem — Clawpack dev documentation @@ -74,7 +74,7 @@

          Navigation

        • previous |
          • -
        • Clawpack 5.10.x documentation »
          • +
        • Clawpack dev documentation »
        • Plotting with Visclaw »
        • Using setplot.py to specify the desired plots »
        • ClawPlotItem
          • @@ -577,7 +577,7 @@

          Methods -

          Version 5.10.x

          +

          Version dev

          Table of Contents

          diff --git a/dev/_sources/about.rst.txt b/dev/_sources/about.rst.txt index ecaf8a148..2b99d1464 100644 --- a/dev/_sources/about.rst.txt +++ b/dev/_sources/about.rst.txt @@ -117,8 +117,8 @@ Citing this work If you use Clawpack in publications, please cite the software itself as well, with a citation similar to the following:: - Clawpack Development Team (2020), Clawpack Version 5.7.1, - http://www.clawpack.org, doi: 10.5281/zenodo.4025432 + Clawpack Development Team (2024), Clawpack Version 5.10.0, + http://www.clawpack.org, doi: 10.5281/zenodo.10896214 Here's the bibtex:: @@ -126,9 +126,9 @@ Here's the bibtex:: title={Clawpack software}, author={{Clawpack Development Team}}, url={http://www.clawpack.org}, - note={Version 5.7.1}, - doi={https://doi.org/10.5281/zenodo.4025432}, - year={2020}} + note={Version 5.10.0}, + doi={https://doi.org/10.5281/zenodo.10896214}, + year={2024}} Please fill in the version number that you used, and its year, with the appropriate DOI from `Zenodo `_, if available. diff --git a/dev/_sources/changes_to_master.rst.txt b/dev/_sources/changes_to_master.rst.txt index cfb3f90b3..6bec44867 100644 --- a/dev/_sources/changes_to_master.rst.txt +++ b/dev/_sources/changes_to_master.rst.txt @@ -3,12 +3,12 @@ .. _changes_to_master: =============================== -Changes to master since v5.9.2 +Changes to master since v5.10.0 =============================== Follow the links to see changes that have been made to the master branch of -each repository since the last release (v5.9.2) on November 4, 2023. +each repository since the last release (v5.10.0) on March 29, 2024. These changes should appear in the next release. If you need them now, see :ref:`developers` for instructions on cloning and installing from the @@ -31,48 +31,48 @@ Changes to classic See `classic diffs -`_ +`_ Changes to clawutil ------------------- See `clawutil diffs -`_ +`_ Changes to visclaw ------------------ See `visclaw diffs -`_ +`_ Changes to riemann ------------------ See `riemann diffs -`_ +`_ Changes to amrclaw ------------------ See `amrclaw diffs -`_ +`_ Changes to geoclaw ------------------ -See `geoclaw diffs `_ +See `geoclaw diffs `_ Changes to PyClaw ------------------ -See `pyclaw diffs `_ +See `pyclaw diffs `_ =========================== Other Clawpack Repositories @@ -82,10 +82,10 @@ The repositories below are not included in the Clawpack tarfile or pip install, but changes to these repositories may also be of interest. - `apps diffs - `_ + `_ - `doc diffs `_ - `docker-files diffs - `_ + `_ diff --git a/dev/_sources/installing_fortcodes.rst.txt b/dev/_sources/installing_fortcodes.rst.txt index 7f30a9c34..c52553afa 100644 --- a/dev/_sources/installing_fortcodes.rst.txt +++ b/dev/_sources/installing_fortcodes.rst.txt @@ -36,9 +36,9 @@ Download a tar file from one of these sources: After downloading a tar file you can do, e.g. :: - tar -xzf clawpack-v5.9.2.tar.gz - cd clawpack-v5.9.2 - export CLAW=/full/path/to/clawpack-v5.9.2 # in bash + tar -xzf clawpack-v5.10.0.tar.gz + cd clawpack-v5.10.0 + export CLAW=/full/path/to/clawpack-v5.10.0 # in bash The last command sets an environment variable when using the bash shell. The syntax may be different in other shells. Replace `/full/path/to` @@ -60,7 +60,7 @@ See :ref:`developers` for more details, but the basic commands are:: git clone https://github.com/clawpack/clawpack.git cd clawpack - git checkout v5.9.2 # or an older version; `git tag -l` to list options + git checkout v5.10.0 # or an older version; `git tag -l` to list options git submodule init # for repositories pyclaw, clawutil, visclaw, etc. git submodule update # clones all the submodule repositories export CLAW=/full/path/to/clawpack # in bash diff --git a/dev/_sources/installing_pip.rst.txt b/dev/_sources/installing_pip.rst.txt index c15ac6829..607c758d6 100644 --- a/dev/_sources/installing_pip.rst.txt +++ b/dev/_sources/installing_pip.rst.txt @@ -32,7 +32,7 @@ Clawpack is via:: or, more specifically, :: - pip install --user clawpack==v5.9.2 + pip install --user clawpack==v5.10.0 or you can choose a previous version from the `PyPi history `__. @@ -56,7 +56,7 @@ following command want to change anything in this command)**:: pip install --src=$HOME/clawpack_src --user --no-build-isolation -e \ - git+https://github.com/clawpack/clawpack.git@v5.9.2#egg=clawpack + git+https://github.com/clawpack/clawpack.git@v5.10.0#egg=clawpack **Notes:** @@ -71,7 +71,7 @@ want to change anything in this command)**:: :ref:`installing_options` if you want more control. - This will download Clawpack (via a git clone) into the directory - `$HOME/clawpack_src/clawpack-v5.9.2`. The top + `$HOME/clawpack_src/clawpack-v5.10.0`. The top installation directory can be changed by modifying the ``--src`` target (or omit this part to put it in your current working directory). If you have already downloaded Clawpack via a different mechanism then @@ -92,11 +92,11 @@ want to change anything in this command)**:: - In order to use the Fortran codes within Clawpack (`classic`, `amrclaw`, or `geoclaw`), you should then set the environment - variable `CLAW` to point to the `clawpack-v5.9.2` directory within + variable `CLAW` to point to the `clawpack-v5.10.0` directory within the installation directory `$HOME/clawpack_src`, and `FC` to point to the desired Fortran compiler, e.g. in the bash shell:: - export CLAW=$HOME/clawpack_src/clawpack-v5.9.2 + export CLAW=$HOME/clawpack_src/clawpack-v5.10.0 export FC=gfortran diff --git a/dev/_sources/releases.rst.txt b/dev/_sources/releases.rst.txt index 64df88ffd..8a0bf4e59 100644 --- a/dev/_sources/releases.rst.txt +++ b/dev/_sources/releases.rst.txt @@ -37,8 +37,8 @@ can also be referenced with the single DOI `10.17605/osf.io/kmw6h `__. See :ref:`citing` for more information on how best to cite Clawpack. -* :ref:`release_5_10_0` -- TBA - `[DOI 10.5281/zenodo.XX] `_ +* :ref:`release_5_10_0` -- March 29, 2024 + `[DOI 10.5281/zenodo.10896214] `_ * :ref:`release_5_9_2` -- November 4, 2023 `[DOI 10.5281/zenodo.10076317] `_ * :ref:`release_5_9_1` -- October 2, 2023 diff --git a/dev/_static/documentation_options.js b/dev/_static/documentation_options.js index 7da634ac5..5eb79b07d 100644 --- a/dev/_static/documentation_options.js +++ b/dev/_static/documentation_options.js @@ -1,6 +1,6 @@ var DOCUMENTATION_OPTIONS = { URL_ROOT: document.getElementById("documentation_options").getAttribute('data-url_root'), - VERSION: '5.10.x', + VERSION: 'dev', LANGUAGE: 'en', COLLAPSE_INDEX: false, BUILDER: 'html', diff --git a/dev/about.html b/dev/about.html index 58391fb62..b5abba921 100644 --- a/dev/about.html +++ b/dev/about.html @@ -6,7 +6,7 @@ - About this software — Clawpack 5.10.x documentation + About this software — Clawpack dev documentation @@ -74,7 +74,7 @@

          Navigation

        • previous |
          • -
        • Clawpack 5.10.x documentation »
          • +
        • Clawpack dev documentation »
        • About this software
    @@ -174,8 +174,8 @@

    License

    Citing this work

    If you use Clawpack in publications, please cite the software itself as well, with a citation similar to the following:

    -
    Clawpack Development Team (2020), Clawpack Version 5.7.1,
-http://www.clawpack.org, doi: 10.5281/zenodo.4025432
+
    Clawpack Development Team (2024), Clawpack Version 5.10.0,
+http://www.clawpack.org, doi: 10.5281/zenodo.10896214
 
    
 
    
 
    Here’s the bibtex:
    
@@ -183,9 +183,9 @@ 
    Licensetitle={Clawpack software},
     author={{Clawpack Development Team}},
     url={http://www.clawpack.org},
-    note={Version 5.7.1},
-    doi={https://doi.org/10.5281/zenodo.4025432},
-    year={2020}}
+    note={Version 5.10.0},
+    doi={https://doi.org/10.5281/zenodo.10896214},
+    year={2024}}

    Please fill in the version number that you used, and its year, with the @@ -270,7 +270,7 @@

    License -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/adjoint.html b/dev/adjoint.html index 68f43f473..3ed144776 100644 --- a/dev/adjoint.html +++ b/dev/adjoint.html @@ -6,7 +6,7 @@ - Guiding AMR with adjoint flagging — Clawpack 5.10.x documentation + Guiding AMR with adjoint flagging — Clawpack dev documentation @@ -75,7 +75,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • AMRClaw Description and Detailed Contents »
  • Guiding AMR with adjoint flagging
    • @@ -265,7 +265,7 @@

    Navigation

    -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/amr_algorithm.html b/dev/amr_algorithm.html index 57b5a36eb..e9d83c3d4 100644 --- a/dev/amr_algorithm.html +++ b/dev/amr_algorithm.html @@ -6,7 +6,7 @@ - Adaptive mesh refinement (AMR) algorithms — Clawpack 5.10.x documentation + Adaptive mesh refinement (AMR) algorithms — Clawpack dev documentation @@ -74,7 +74,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • AMRClaw Description and Detailed Contents »
  • Adaptive mesh refinement (AMR) algorithms
    • @@ -247,7 +247,7 @@

    For more details -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/amrclaw.html b/dev/amrclaw.html index 79331240e..cc5038948 100644 --- a/dev/amrclaw.html +++ b/dev/amrclaw.html @@ -6,7 +6,7 @@ - AMRClaw Description and Detailed Contents — Clawpack 5.10.x documentation + AMRClaw Description and Detailed Contents — Clawpack dev documentation @@ -74,7 +74,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • AMRClaw Description and Detailed Contents
    • @@ -194,7 +194,7 @@

    Navigation

    -

    Version 5.10.x

    +

    Version dev

    Related Topics

    @@ -107,7 +107,7 @@

    Navigation

    -

    Version 5.10.x

    +

    Version dev

    Related Topics

    @@ -125,7 +125,7 @@

    Navigation

    -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/apps.html b/dev/apps.html index 0225495e4..03dae124d 100644 --- a/dev/apps.html +++ b/dev/apps.html @@ -6,7 +6,7 @@ - Clawpack Applications repository — Clawpack 5.10.x documentation + Clawpack Applications repository — Clawpack dev documentation @@ -74,7 +74,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • Clawpack Applications repository
    • @@ -164,7 +164,7 @@

    Examples included with Clawpack -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/aws.html b/dev/aws.html index d211d105b..6def03008 100644 --- a/dev/aws.html +++ b/dev/aws.html @@ -6,7 +6,7 @@ - Amazon Web Services EC2 Clawpack AMI — Clawpack 5.10.x documentation + Amazon Web Services EC2 Clawpack AMI — Clawpack dev documentation @@ -74,7 +74,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • Amazon Web Services EC2 Clawpack AMI
    • @@ -322,7 +322,7 @@

    Creating your own AMI -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/b4run.html b/dev/b4run.html index 6e9e0d9d3..ff4bae2fc 100644 --- a/dev/b4run.html +++ b/dev/b4run.html @@ -6,7 +6,7 @@ - b4run function — Clawpack 5.10.x documentation + b4run function — Clawpack dev documentation @@ -74,7 +74,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • b4run function
    • @@ -125,7 +125,7 @@

    Navigation

    -

    Version 5.10.x

    +

    Version dev

    Related Topics

    @@ -112,7 +112,7 @@

    Navigation

    -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/bc.html b/dev/bc.html index 16ed75fec..b92a669e4 100644 --- a/dev/bc.html +++ b/dev/bc.html @@ -6,7 +6,7 @@ - Boundary conditions — Clawpack 5.10.x documentation + Boundary conditions — Clawpack dev documentation @@ -74,7 +74,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • Boundary conditions
    • @@ -229,7 +229,7 @@

    Navigation

    -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/biblio.html b/dev/biblio.html index 4f2bba8b6..600239ab7 100644 --- a/dev/biblio.html +++ b/dev/biblio.html @@ -6,7 +6,7 @@ - Bibliography — Clawpack 5.10.x documentation + Bibliography — Clawpack dev documentation @@ -70,7 +70,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • Bibliography
    • @@ -425,7 +425,7 @@

    Other references -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/bouss1d.html b/dev/bouss1d.html index afa134a03..26c053312 100644 --- a/dev/bouss1d.html +++ b/dev/bouss1d.html @@ -6,7 +6,7 @@ - Boussinesq solvers in One Space Dimension — Clawpack 5.10.x documentation + Boussinesq solvers in One Space Dimension — Clawpack dev documentation @@ -74,7 +74,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • GeoClaw Description and Detailed Contents »
  • Boussinesq solvers in One Space Dimension
    • @@ -196,7 +196,7 @@

    Navigation

    -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/bouss2d.html b/dev/bouss2d.html index 0e8faff09..c4b0f6894 100644 --- a/dev/bouss2d.html +++ b/dev/bouss2d.html @@ -6,7 +6,7 @@ - Boussinesq solvers in Two Space Dimensions — Clawpack 5.10.x documentation + Boussinesq solvers in Two Space Dimensions — Clawpack dev documentation @@ -74,7 +74,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • GeoClaw Description and Detailed Contents »
  • Boussinesq solvers in Two Space Dimensions
    • @@ -353,7 +353,7 @@

    Examples -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/changes_to_master.html b/dev/changes_to_master.html index 97e78e85d..16c182f19 100644 --- a/dev/changes_to_master.html +++ b/dev/changes_to_master.html @@ -6,7 +6,7 @@ - Changes to master since v5.9.2 — Clawpack 5.10.x documentation + Changes to master since v5.10.0 — Clawpack dev documentation @@ -66,8 +66,8 @@

    Navigation

  • modules |
    • -
  • Clawpack 5.10.x documentation »
    • -
  • Changes to master since v5.9.2
    • +
  • Clawpack dev documentation »
    • +
  • Changes to master since v5.10.0
    • @@ -76,10 +76,10 @@

    Navigation

    -
    -

    Changes to master since v5.9.2

    +
    +

    Changes to master since v5.10.0

    Follow the links to see changes that have been made to the master branch of -each repository since the last release (v5.9.2) on November 4, 2023.

    +each repository since the last release (v5.10.0) on March 29, 2024.

    These changes should appear in the next release. If you need them now, see Developers’ Guide for instructions on cloning and installing from the master branch.

    @@ -94,31 +94,31 @@

    General changes

    Changes to classic

    -

    See classic diffs

    +

    See classic diffs

    Changes to clawutil

    -

    See clawutil diffs

    +

    See clawutil diffs

    Changes to visclaw

    -

    See visclaw diffs

    +

    See visclaw diffs

    Changes to riemann

    -

    See riemann diffs

    +

    See riemann diffs

    Changes to amrclaw

    -

    See amrclaw diffs

    +

    See amrclaw diffs

    Changes to geoclaw

    -

    See geoclaw diffs

    +

    See geoclaw diffs

    Changes to PyClaw

    -

    See pyclaw diffs

    +

    See pyclaw diffs

    @@ -126,9 +126,9 @@

    Other Clawpack Repositories -

  • apps diffs

    • +

  • apps diffs

  • doc diffs

    • -

  • docker-files diffs

    • +

  • docker-files diffs

    • @@ -142,12 +142,12 @@

    Other Clawpack Repositories -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    @@ -118,7 +118,7 @@

    Navigation

    -

    Version 5.10.x

    +

    Version dev

    Related Topics

    @@ -151,7 +151,7 @@

    Python conversion tool -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/claw4x.html b/dev/claw4x.html index bcee0e3e6..ea2f06139 100644 --- a/dev/claw4x.html +++ b/dev/claw4x.html @@ -6,7 +6,7 @@ - Clawpack 4.x links — Clawpack 5.10.x documentation + Clawpack 4.x links — Clawpack dev documentation @@ -66,7 +66,7 @@

    Navigation

  • modules |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • Clawpack 4.x links
    • @@ -94,7 +94,7 @@

    Navigation

    -

    Version 5.10.x

    +

    Version dev

    Related Topics

    @@ -294,7 +294,7 @@

    Changes to plotting routines -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/clawpack_components.html b/dev/clawpack_components.html index 6e0a41294..3836b89d0 100644 --- a/dev/clawpack_components.html +++ b/dev/clawpack_components.html @@ -6,7 +6,7 @@ - Clawpack components — Clawpack 5.10.x documentation + Clawpack components — Clawpack dev documentation @@ -74,7 +74,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • Clawpack components
    • @@ -133,7 +133,7 @@

    Navigation

    -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/community.html b/dev/community.html index fc0c41475..74dd85cdc 100644 --- a/dev/community.html +++ b/dev/community.html @@ -6,7 +6,7 @@ - Clawpack Community — Clawpack 5.10.x documentation + Clawpack Community — Clawpack dev documentation @@ -75,7 +75,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • Clawpack Community
    • @@ -223,7 +223,7 @@

    Other Clawpack events -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/contents.html b/dev/contents.html index a8687e61f..4b5fb57e4 100644 --- a/dev/contents.html +++ b/dev/contents.html @@ -6,7 +6,7 @@ - Full Table of Contents — Clawpack 5.10.x documentation + Full Table of Contents — Clawpack dev documentation @@ -70,7 +70,7 @@

    Navigation

  • next |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • Full Table of Contents
    • @@ -391,7 +391,7 @@

    References -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/contribute_apps.html b/dev/contribute_apps.html index b0ef55d09..380e7aa13 100644 --- a/dev/contribute_apps.html +++ b/dev/contribute_apps.html @@ -6,7 +6,7 @@ - Contributing examples and applications — Clawpack 5.10.x documentation + Contributing examples and applications — Clawpack dev documentation @@ -74,7 +74,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • Contributing examples and applications
    • @@ -107,7 +107,7 @@

    Navigation

    -

    Version 5.10.x

    +

    Version dev

    Related Topics

    @@ -494,7 +494,7 @@

    Trouble-Shooting Tip

    -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/docker_image.html b/dev/docker_image.html index a80628cf3..81908b478 100644 --- a/dev/docker_image.html +++ b/dev/docker_image.html @@ -6,7 +6,7 @@ - Docker for Clawpack — Clawpack 5.10.x documentation + Docker for Clawpack — Clawpack dev documentation @@ -74,7 +74,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • Docker for Clawpack
    • @@ -247,7 +247,7 @@

    Dockerfiles for binder -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/dtopotools_module.html b/dev/dtopotools_module.html index c510cedbb..97adca3f8 100644 --- a/dev/dtopotools_module.html +++ b/dev/dtopotools_module.html @@ -6,7 +6,7 @@ - dtopotools module for moving topography — Clawpack 5.10.x documentation + dtopotools module for moving topography — Clawpack dev documentation @@ -74,7 +74,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • GeoClaw Description and Detailed Contents »
  • Python tools for working with topo and dtopo »
  • dtopotools module for moving topography
    • @@ -974,7 +974,7 @@

    Navigation

    -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/f77_vs_f90.html b/dev/f77_vs_f90.html index b9247e7f5..e01ee95b2 100644 --- a/dev/f77_vs_f90.html +++ b/dev/f77_vs_f90.html @@ -6,7 +6,7 @@ - Fortran 77 vs. Fortran 90 files — Clawpack 5.10.x documentation + Fortran 77 vs. Fortran 90 files — Clawpack dev documentation @@ -74,7 +74,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • Fortran 77 vs. Fortran 90 files
    • @@ -103,7 +103,7 @@

    Navigation

    -

    Version 5.10.x

    +

    Version dev

    Related Topics

    @@ -198,7 +198,7 @@

    Navigation

    -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/fgout.html b/dev/fgout.html index 96f0afcbe..d03613877 100644 --- a/dev/fgout.html +++ b/dev/fgout.html @@ -6,7 +6,7 @@ - Fixed grid output (fgout) — Clawpack 5.10.x documentation + Fixed grid output (fgout) — Clawpack dev documentation @@ -74,7 +74,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • GeoClaw Description and Detailed Contents »
  • Fixed grid output (fgout)
    • @@ -344,7 +344,7 @@

    A simple example -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/fgout_tools_module.html b/dev/fgout_tools_module.html index c720c61c9..b10f0993b 100644 --- a/dev/fgout_tools_module.html +++ b/dev/fgout_tools_module.html @@ -6,7 +6,7 @@ - fgout_tools module for working with fgout grids — Clawpack 5.10.x documentation + fgout_tools module for working with fgout grids — Clawpack dev documentation @@ -66,7 +66,7 @@

    Navigation

  • modules |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • fgout_tools module for working with fgout grids
    • @@ -388,7 +388,7 @@

    Navigation

    -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/first_run.html b/dev/first_run.html index 96aa72e15..aaf8751a4 100644 --- a/dev/first_run.html +++ b/dev/first_run.html @@ -6,7 +6,7 @@ - Running an example — Clawpack 5.10.x documentation + Running an example — Clawpack dev documentation @@ -74,7 +74,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • Running an example
    • @@ -186,7 +186,7 @@

    Classic -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/first_run_fortran.html b/dev/first_run_fortran.html index 720b7ab99..1a2fd4e7b 100644 --- a/dev/first_run_fortran.html +++ b/dev/first_run_fortran.html @@ -6,7 +6,7 @@ - Testing your Fortran installation and running an example — Clawpack 5.10.x documentation + Testing your Fortran installation and running an example — Clawpack dev documentation @@ -74,7 +74,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • Testing your Fortran installation and running an example
    • @@ -214,7 +214,7 @@

    More examples -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/first_run_pyclaw.html b/dev/first_run_pyclaw.html index d1c966ddf..c847693f6 100644 --- a/dev/first_run_pyclaw.html +++ b/dev/first_run_pyclaw.html @@ -6,7 +6,7 @@ - Testing a PyClaw installation and running an example — Clawpack 5.10.x documentation + Testing a PyClaw installation and running an example — Clawpack dev documentation @@ -74,7 +74,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • PyClaw »
  • Testing a PyClaw installation and running an example
    • @@ -141,7 +141,7 @@

    From the command line -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/flagregions.html b/dev/flagregions.html index deb9f9ab1..fbb18e880 100644 --- a/dev/flagregions.html +++ b/dev/flagregions.html @@ -6,7 +6,7 @@ - Specifying flagregions for adaptive refinement — Clawpack 5.10.x documentation + Specifying flagregions for adaptive refinement — Clawpack dev documentation @@ -75,7 +75,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • AMRClaw Description and Detailed Contents »
  • Specifying flagregions for adaptive refinement
    • @@ -184,7 +184,7 @@

    Navigation

    -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/force_dry.html b/dev/force_dry.html index 17f0b1cdd..a111864f4 100644 --- a/dev/force_dry.html +++ b/dev/force_dry.html @@ -6,7 +6,7 @@ - Force Cells to be Dry Initially — Clawpack 5.10.x documentation + Force Cells to be Dry Initially — Clawpack dev documentation @@ -74,7 +74,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • GeoClaw Description and Detailed Contents »
  • Force Cells to be Dry Initially
    • @@ -407,7 +407,7 @@

    Internal GeoClaw modifications -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/fortran.html b/dev/fortran.html index 4445ec86b..a902f16b6 100644 --- a/dev/fortran.html +++ b/dev/fortran.html @@ -6,7 +6,7 @@ - Fortran version — Clawpack 5.10.x documentation + Fortran version — Clawpack dev documentation @@ -74,7 +74,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • Fortran version
    • @@ -165,7 +165,7 @@

    More tips -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/fortran_compilers.html b/dev/fortran_compilers.html index 17db8610b..50087af5f 100644 --- a/dev/fortran_compilers.html +++ b/dev/fortran_compilers.html @@ -6,7 +6,7 @@ - Fortran Compilers — Clawpack 5.10.x documentation + Fortran Compilers — Clawpack dev documentation @@ -74,7 +74,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • Fortran Compilers
    • @@ -220,7 +220,7 @@

    Navigation

    -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/fvmbook.html b/dev/fvmbook.html index bab97eb6e..d3942effd 100644 --- a/dev/fvmbook.html +++ b/dev/fvmbook.html @@ -6,7 +6,7 @@ - Examples from the book FVMHP — Clawpack 5.10.x documentation + Examples from the book FVMHP — Clawpack dev documentation @@ -74,7 +74,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • Examples from the book FVMHP
    • @@ -129,7 +129,7 @@

    YouTube Videos -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/galleries.html b/dev/galleries.html index c9001a0cb..f1c792644 100644 --- a/dev/galleries.html +++ b/dev/galleries.html @@ -6,7 +6,7 @@ - Clawpack Gallery — Clawpack 5.10.x documentation + Clawpack Gallery — Clawpack dev documentation @@ -74,7 +74,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • Clawpack Gallery
    • @@ -120,7 +120,7 @@

    Navigation

    -

    Version 5.10.x

    +

    Version dev

    Related Topics

    @@ -1448,7 +1448,7 @@

    Z

    -

    Version 5.10.x

    +

    Version dev

    Related Topics

    @@ -280,7 +280,7 @@

    Navigation

    -

    Version 5.10.x

    +

    Version dev

    Related Topics

    @@ -146,7 +146,7 @@

    Setting up a new example -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/geoclaw_util_module.html b/dev/geoclaw_util_module.html index d7b9c8ef8..c0bcd9677 100644 --- a/dev/geoclaw_util_module.html +++ b/dev/geoclaw_util_module.html @@ -6,7 +6,7 @@ - geoclaw.util module of utility functions — Clawpack 5.10.x documentation + geoclaw.util module of utility functions — Clawpack dev documentation @@ -74,7 +74,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • GeoClaw Description and Detailed Contents »
  • Python tools for working with topo and dtopo »
  • geoclaw.util module of utility functions
    • @@ -266,7 +266,7 @@

    Navigation

    -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/geohints.html b/dev/geohints.html index 75899754b..59223c21f 100644 --- a/dev/geohints.html +++ b/dev/geohints.html @@ -6,7 +6,7 @@ - Cautionary Hints on using GeoClaw — Clawpack 5.10.x documentation + Cautionary Hints on using GeoClaw — Clawpack dev documentation @@ -74,7 +74,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • GeoClaw Description and Detailed Contents »
  • Cautionary Hints on using GeoClaw
    • @@ -183,7 +183,7 @@

    Navigation

    -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/geoplot.html b/dev/geoplot.html index b7af12fb1..6bbaae350 100644 --- a/dev/geoplot.html +++ b/dev/geoplot.html @@ -6,7 +6,7 @@ - GeoClaw plotting tools — Clawpack 5.10.x documentation + GeoClaw plotting tools — Clawpack dev documentation @@ -74,7 +74,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • Plotting with Visclaw »
  • GeoClaw plotting tools
    • @@ -128,7 +128,7 @@

    Tips on latitude-longitude coordinate axes -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/git_versions.html b/dev/git_versions.html index ef6f1f93b..ba0d59c41 100644 --- a/dev/git_versions.html +++ b/dev/git_versions.html @@ -6,7 +6,7 @@ - Keeping track of repository versions with Git — Clawpack 5.10.x documentation + Keeping track of repository versions with Git — Clawpack dev documentation @@ -74,7 +74,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • PyClaw »
  • Developers’ Guide »
  • Keeping track of repository versions with Git
    • @@ -124,7 +124,7 @@

    Navigation

    -

    Version 5.10.x

    +

    Version dev

    Related Topics

    @@ -143,7 +143,7 @@

    References -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/grid_registration.html b/dev/grid_registration.html index 52eb23264..bd6005cb2 100644 --- a/dev/grid_registration.html +++ b/dev/grid_registration.html @@ -6,7 +6,7 @@ - Grid registration — Clawpack 5.10.x documentation + Grid registration — Clawpack dev documentation @@ -74,7 +74,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • GeoClaw Description and Detailed Contents »
  • Grid registration
    • @@ -199,7 +199,7 @@

    NetCDF files -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/howto_doc.html b/dev/howto_doc.html index 2f40f7a57..a182bb233 100644 --- a/dev/howto_doc.html +++ b/dev/howto_doc.html @@ -6,7 +6,7 @@ - Guide for updating this documentation — Clawpack 5.10.x documentation + Guide for updating this documentation — Clawpack dev documentation @@ -74,7 +74,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • PyClaw »
  • Developers’ Guide »
  • Guide for updating this documentation
    • @@ -370,7 +370,7 @@

    Pages from other clawpack repositories -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/howto_release.html b/dev/howto_release.html index 567dda2b3..671fadf8e 100644 --- a/dev/howto_release.html +++ b/dev/howto_release.html @@ -6,7 +6,7 @@ - Guide for doing a Clawpack release — Clawpack 5.10.x documentation + Guide for doing a Clawpack release — Clawpack dev documentation @@ -74,7 +74,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • PyClaw »
  • Developers’ Guide »
  • Guide for doing a Clawpack release
    • @@ -185,7 +185,7 @@

    Final releaseChanges to master since v5.9.2 which generate diffs between the latest version and +Changes to master since v5.10.0 which generate diffs between the latest version and the current master branch of each repository.

    @@ -340,7 +340,7 @@

    Updating the Dockerfile -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/index.html b/dev/index.html index 1f745ab3e..da5b6cb10 100644 --- a/dev/index.html +++ b/dev/index.html @@ -5,7 +5,7 @@ - Clawpack documentation — Clawpack 5.10.x documentation + Clawpack documentation — Clawpack dev documentation @@ -65,7 +65,7 @@

    Navigation

  • modules |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • Clawpack documentation
    • @@ -252,7 +252,7 @@

    Older versions

    -

    Version 5.10.x

    +

    Version dev

    @@ -148,7 +148,7 @@

    Next steps: -

    Version 5.10.x

    +

    Version dev

    Table of Contents

    diff --git a/dev/installing_fortcodes.html b/dev/installing_fortcodes.html index 75e964399..2ac19632a 100644 --- a/dev/installing_fortcodes.html +++ b/dev/installing_fortcodes.html @@ -6,7 +6,7 @@ - Options for installing Clawpack Fortran codes — Clawpack 5.10.x documentation + Options for installing Clawpack Fortran codes — Clawpack dev documentation @@ -74,7 +74,7 @@

    Navigation

  • previous |
    • -
  • Clawpack 5.10.x documentation »
    • +
  • Clawpack dev documentation »
  • Options for installing Clawpack Fortran codes
    • @@ -106,9 +106,9 @@

    Navigation

    Citing this work)

    After downloading a tar file you can do, e.g.

    -
    tar -xzf clawpack-v5.9.2.tar.gz
-cd clawpack-v5.9.2
-export CLAW=/full/path/to/clawpack-v5.9.2  # in bash
+
    tar -xzf clawpack-v5.10.0.tar.gz
+cd clawpack-v5.10.0
+export CLAW=/full/path/to/clawpack-v5.10.0  # in bash
 
    
 
    
 
    The last command sets an environment variable when using the bash shell.
@@ -126,7 +126,7 @@ 
    Navigation
    
 See Developers’ Guide for more details, but the basic commands are:
    
 
    git clone https://github.com/clawpack/clawpack.git
 cd clawpack
-git checkout v5.9.2     # or an older version; `git tag -l` to list options
+git checkout v5.10.0     # or an older version; `git tag -l` to list options
 git submodule init      # for repositories pyclaw, clawutil, visclaw, etc.
 git submodule update    # clones all the submodule repositories
 export CLAW=/full/path/to/clawpack    # in bash
@@ -162,7 +162,7 @@ 
    Next steps:
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/installing_pip.html b/dev/installing_pip.html
index 0dc7875c9..916317c5e 100644
--- a/dev/installing_pip.html
+++ b/dev/installing_pip.html
@@ -6,7 +6,7 @@
     
     
 
-    pip install instructions — Clawpack 5.10.x documentation
+    pip install instructions — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • pip install instructions
    •  
       
     
      
@@ -104,7 +104,7 @@ 
    Navigation
    
 
    
 
    
 
    or, more specifically,
    
-
    pip install --user clawpack==v5.9.2
+
    pip install --user clawpack==v5.10.0
 
    
 
    
 
    or you can choose a previous version from the PyPi history.
    
@@ -122,7 +122,7 @@ 
    Navigation
    
 (you might want to first read the notes below to see if you
 want to change anything in this command):
    
 
    pip install --src=$HOME/clawpack_src --user --no-build-isolation -e \
-    git+https://github.com/clawpack/clawpack.git@v5.9.2#egg=clawpack
+    git+https://github.com/clawpack/clawpack.git@v5.10.0#egg=clawpack
 
    
 
    
 
    Notes:
    
@@ -135,7 +135,7 @@ 
    Navigation
    
 convert Fortran Riemann solvers to Python versions.  See
 installing_options if you want more control.
    
 
  • This will download Clawpack (via a git clone) into the directory
-$HOME/clawpack_src/clawpack-v5.9.2.  The top
+$HOME/clawpack_src/clawpack-v5.10.0.  The top
 installation directory can be changed by modifying the --src target
 (or omit this part to put it in your current working directory).
 If you have already downloaded Clawpack via a different mechanism then
@@ -152,10 +152,10 @@ 
    Navigation
    
 site-packages directory and delete everything else.)
    • 
 
  • In order to use the Fortran codes within Clawpack (classic,
 amrclaw, or geoclaw), you should then set the environment
-variable CLAW to point to the clawpack-v5.9.2 directory within
+variable CLAW to point to the clawpack-v5.10.0 directory within
 the installation directory $HOME/clawpack_src, and FC to point
 to the desired Fortran compiler, e.g. in the bash shell:
    
-
    export CLAW=$HOME/clawpack_src/clawpack-v5.9.2
+
    export CLAW=$HOME/clawpack_src/clawpack-v5.10.0
 export FC=gfortran
 
    
 
    
@@ -258,7 +258,7 @@ 
    Experimenting with code in the examples directories
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/kmltools_module.html b/dev/kmltools_module.html
index 8136c823c..e025ea066 100644
--- a/dev/kmltools_module.html
+++ b/dev/kmltools_module.html
@@ -6,7 +6,7 @@
     
     
 
-    kmltools module of utility functions — Clawpack 5.10.x documentation
+    kmltools module of utility functions — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • GeoClaw Description and Detailed Contents »
    • 
           
  • Python tools for working with topo and dtopo »
    • 
         
  • kmltools module of utility functions
    •  
@@ -554,7 +554,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/lagrangian_gauges.html b/dev/lagrangian_gauges.html
index a5af23f46..d274d45c7 100644
--- a/dev/lagrangian_gauges.html
+++ b/dev/lagrangian_gauges.html
@@ -6,7 +6,7 @@
     
     
 
-    Lagrangian gauges for particle tracking — Clawpack 5.10.x documentation
+    Lagrangian gauges for particle tracking — Clawpack dev documentation
     
     
     
@@ -75,7 +75,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • GeoClaw Description and Detailed Contents »
    • 
         
  • Lagrangian gauges for particle tracking
    •  
       
@@ -167,7 +167,7 @@ 
    An alternative using fgout grids
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/license.html b/dev/license.html
index 96057832d..a3f87f3a0 100644
--- a/dev/license.html
+++ b/dev/license.html
@@ -6,7 +6,7 @@
     
     
 
-    License — Clawpack 5.10.x documentation
+    License — Clawpack dev documentation
     
     
     
@@ -66,7 +66,7 @@ 
    Navigation
    
         
  • 
           modules |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • License
    •  
       
     
      
@@ -121,7 +121,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    Related Topics
    
 
      
@@ -214,7 +214,7 @@ 
    Duplicate Base Source Name
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/makefiles_library.html b/dev/makefiles_library.html
index 7cd73675e..f97b104ea 100644
--- a/dev/makefiles_library.html
+++ b/dev/makefiles_library.html
@@ -6,7 +6,7 @@
     
     
 
-    Library routines in Makefiles — Clawpack 5.10.x documentation
+    Library routines in Makefiles — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • Library routines in Makefiles
    •  
       
     
      
@@ -217,7 +217,7 @@ 
    Using a modified library routine with a different name
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/manning.html b/dev/manning.html
index 6d540efc6..b320d3a9d 100644
--- a/dev/manning.html
+++ b/dev/manning.html
@@ -6,7 +6,7 @@
     
     
 
-    Manning friction term — Clawpack 5.10.x documentation
+    Manning friction term — Clawpack dev documentation
     
     
     
@@ -75,7 +75,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • GeoClaw Description and Detailed Contents »
    • 
         
  • Manning friction term
    •  
       
@@ -146,7 +146,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    Related Topics
    
 
      
@@ -99,7 +99,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    Related Topics
    
 
@@ -388,7 +388,7 @@ 
    Switching examples
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/nearshore_interp.html b/dev/nearshore_interp.html
index 957fee665..59f194574 100644
--- a/dev/nearshore_interp.html
+++ b/dev/nearshore_interp.html
@@ -6,7 +6,7 @@
     
     
 
-    Nearshore interpolation — Clawpack 5.10.x documentation
+    Nearshore interpolation — Clawpack dev documentation
     
     
     
@@ -75,7 +75,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • GeoClaw Description and Detailed Contents »
    • 
         
  • Nearshore interpolation
    •  
       
@@ -150,7 +150,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    Related Topics
    
 
      
@@ -96,7 +96,7 @@ 
    Using NetCDF output
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    Related Topics
    
 
      
@@ -112,7 +112,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/objects.inv b/dev/objects.inv
index 3c3825d5d..b1b507b08 100644
Binary files a/dev/objects.inv and b/dev/objects.inv differ
diff --git a/dev/okada.html b/dev/okada.html
index 93c16645f..7e9e5bb46 100644
--- a/dev/okada.html
+++ b/dev/okada.html
@@ -6,7 +6,7 @@
     
     
 
-    Earthquake sources: Fault slip and the Okada model — Clawpack 5.10.x documentation
+    Earthquake sources: Fault slip and the Okada model — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • GeoClaw Description and Detailed Contents »
    • 
         
  • Earthquake sources: Fault slip and the Okada model
    •  
       
@@ -300,7 +300,7 @@ 
    Kinematic rupture
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/openmp.html b/dev/openmp.html
index 87f9c8e20..166ef32bd 100644
--- a/dev/openmp.html
+++ b/dev/openmp.html
@@ -6,7 +6,7 @@
     
     
 
-    Using OpenMP — Clawpack 5.10.x documentation
+    Using OpenMP — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • Using OpenMP
    •  
       
     
      
@@ -168,7 +168,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/output_styles.html b/dev/output_styles.html
index 6cfb9da6e..9344b172b 100644
--- a/dev/output_styles.html
+++ b/dev/output_styles.html
@@ -6,7 +6,7 @@
     
     
 
-    Output data sytles and formats — Clawpack 5.10.x documentation
+    Output data sytles and formats — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • Output data sytles and formats
    •  
       
     
      
@@ -246,7 +246,7 @@ 
    fort.q0002
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/packages.html b/dev/packages.html
index 746e2844b..e88729f7b 100644
--- a/dev/packages.html
+++ b/dev/packages.html
@@ -6,7 +6,7 @@
     
     
 
-    Which Clawpack solver should I use? — Clawpack 5.10.x documentation
+    Which Clawpack solver should I use? — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • Which Clawpack solver should I use?
    •  
       
     
      
@@ -158,7 +158,7 @@ 
    Parallel computing
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/photos.html b/dev/photos.html
index 70c4bf855..d83c05b8a 100644
--- a/dev/photos.html
+++ b/dev/photos.html
@@ -6,7 +6,7 @@
     
     
 
-    Clawpack Community Photos — Clawpack 5.10.x documentation
+    Clawpack Community Photos — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • Clawpack Community Photos
    •  
       
     
      
@@ -129,7 +129,7 @@ 
    2010 GeoClaw hacking UW
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/plotexamples.html b/dev/plotexamples.html
index 470e47c81..7fec8490c 100644
--- a/dev/plotexamples.html
+++ b/dev/plotexamples.html
@@ -6,7 +6,7 @@
     
     
 
-    Plotting examples — Clawpack 5.10.x documentation
+    Plotting examples — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • Plotting with Visclaw »
    • 
         
  • Plotting examples
    •  
       
@@ -103,7 +103,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    Related Topics
    
 
      
@@ -201,7 +201,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/plotting_faq.html b/dev/plotting_faq.html
index 7957ec972..67f639c39 100644
--- a/dev/plotting_faq.html
+++ b/dev/plotting_faq.html
@@ -6,7 +6,7 @@
     
     
 
-    Plotting hints and FAQ — Clawpack 5.10.x documentation
+    Plotting hints and FAQ — Clawpack dev documentation
     
     
     
@@ -75,7 +75,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • Plotting with Visclaw »
    • 
         
  • Plotting hints and FAQ
    •  
       
@@ -411,7 +411,7 @@ 
    How to debug setplot
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/plotting_geoclaw.html b/dev/plotting_geoclaw.html
index 9fec9bfb5..f3be16010 100644
--- a/dev/plotting_geoclaw.html
+++ b/dev/plotting_geoclaw.html
@@ -6,7 +6,7 @@
     
     
 
-    Plotting routines for GeoClaw — Clawpack 5.10.x documentation
+    Plotting routines for GeoClaw — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • GeoClaw Description and Detailed Contents »
    • 
         
  • Plotting routines for GeoClaw
    •  
       
@@ -112,7 +112,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    Related Topics
    
 
     
      
@@ -135,7 +135,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/py-modindex.html b/dev/py-modindex.html
index 413ac38e1..8494a1886 100644
--- a/dev/py-modindex.html
+++ b/dev/py-modindex.html
@@ -5,7 +5,7 @@
   
     
     
-    Python Module Index — Clawpack 5.10.x documentation
+    Python Module Index — Clawpack dev documentation
     
     
     
@@ -68,7 +68,7 @@ 
    Navigation
    
         
  • 
           modules |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • Python Module Index
    •  
       
     
      
@@ -197,7 +197,7 @@ 
    Python Module Index
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    Related Topics
    
 
@@ -129,7 +129,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    Related Topics
    
 
      
@@ -104,7 +104,7 @@ 
    Sage Math Cloud
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/pyclaw/controller.html b/dev/pyclaw/controller.html
index b1096d441..3ba5f2389 100644
--- a/dev/pyclaw/controller.html
+++ b/dev/pyclaw/controller.html
@@ -6,7 +6,7 @@
     
     
 
-    Pyclaw Controller Class — Clawpack 5.10.x documentation
+    Pyclaw Controller Class — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • PyClaw »
    • 
         
  • Pyclaw Controller Class
    •  
       
@@ -382,7 +382,7 @@ 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/pyclaw/evolve/limiters.html b/dev/pyclaw/evolve/limiters.html
index 2153482b5..d473b62c5 100644
--- a/dev/pyclaw/evolve/limiters.html
+++ b/dev/pyclaw/evolve/limiters.html
@@ -6,7 +6,7 @@
     
     
 
-    Pyclaw Limiters — Clawpack 5.10.x documentation
+    Pyclaw Limiters — Clawpack dev documentation
     
     
     
@@ -75,7 +75,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • PyClaw »
    • 
         
  • Pyclaw Limiters
    •  
       
@@ -323,7 +323,7 @@ 
    CFL Dependent Limiters
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/pyclaw/examples.html b/dev/pyclaw/examples.html
index f4c83047c..cc90b49cc 100644
--- a/dev/pyclaw/examples.html
+++ b/dev/pyclaw/examples.html
@@ -6,7 +6,7 @@
     
     
 
-    Working with PyClaw’s built-in examples — Clawpack 5.10.x documentation
+    Working with PyClaw’s built-in examples — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • PyClaw »
    • 
           
  • PyClaw Basics »
    • 
         
  • Working with PyClaw’s built-in examples
    •  
@@ -157,7 +157,7 @@ 
    Adding new examples
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/pyclaw/geometry.html b/dev/pyclaw/geometry.html
index a55baf326..18c623c7e 100644
--- a/dev/pyclaw/geometry.html
+++ b/dev/pyclaw/geometry.html
@@ -6,7 +6,7 @@
     
     
 
-    PyClaw Geometry — Clawpack 5.10.x documentation
+    PyClaw Geometry — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • PyClaw »
    • 
         
  • PyClaw Geometry
    •  
       
@@ -750,7 +750,7 @@ 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/pyclaw/going_further.html b/dev/pyclaw/going_further.html
index f9d8e2e03..3f382c84f 100644
--- a/dev/pyclaw/going_further.html
+++ b/dev/pyclaw/going_further.html
@@ -6,7 +6,7 @@
     
     
 
-    Going Further — Clawpack 5.10.x documentation
+    Going Further — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • PyClaw »
    • 
         
  • Going Further
    •  
       
@@ -136,7 +136,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    Related Topics
    
 
      
@@ -326,7 +326,7 @@ 
    Citing PyClaw
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/pyclaw/io.html b/dev/pyclaw/io.html
index 1779bdc9f..8f58d6ac3 100644
--- a/dev/pyclaw/io.html
+++ b/dev/pyclaw/io.html
@@ -6,7 +6,7 @@
     
     
 
-    Pyclaw Input/Output Package — Clawpack 5.10.x documentation
+    Pyclaw Input/Output Package — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • PyClaw »
    • 
         
  • Pyclaw Input/Output Package
    •  
       
@@ -607,7 +607,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/pyclaw/output.html b/dev/pyclaw/output.html
index 7747890d7..8b5726d32 100644
--- a/dev/pyclaw/output.html
+++ b/dev/pyclaw/output.html
@@ -6,7 +6,7 @@
     
     
 
-    PyClaw output — Clawpack 5.10.x documentation
+    PyClaw output — Clawpack dev documentation
     
     
     
@@ -75,7 +75,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • PyClaw »
    • 
           
  • Going Further »
    • 
         
  • PyClaw output
    •  
@@ -318,7 +318,7 @@ 
    Logging
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/pyclaw/parallel.html b/dev/pyclaw/parallel.html
index 325d42f52..373979f86 100644
--- a/dev/pyclaw/parallel.html
+++ b/dev/pyclaw/parallel.html
@@ -6,7 +6,7 @@
     
     
 
-    Running in parallel — Clawpack 5.10.x documentation
+    Running in parallel — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • PyClaw »
    • 
           
  • Going Further »
    • 
         
  • Running in parallel
    •  
@@ -281,7 +281,7 @@ 
    Passing options to PETSc
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/pyclaw/plotting.html b/dev/pyclaw/plotting.html
index a3585a771..ddef0f378 100644
--- a/dev/pyclaw/plotting.html
+++ b/dev/pyclaw/plotting.html
@@ -6,7 +6,7 @@
     
     
 
-    Plotting PyClaw results — Clawpack 5.10.x documentation
+    Plotting PyClaw results — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • PyClaw »
    • 
           
  • PyClaw Basics »
    • 
         
  • Plotting PyClaw results
    •  
@@ -141,7 +141,7 @@ 
    Plotting result from parallel runs
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/pyclaw/problem.html b/dev/pyclaw/problem.html
index 199c3a34c..ac44d068a 100644
--- a/dev/pyclaw/problem.html
+++ b/dev/pyclaw/problem.html
@@ -6,7 +6,7 @@
     
     
 
-    Setting up your own problem — Clawpack 5.10.x documentation
+    Setting up your own problem — Clawpack dev documentation
     
     
     
@@ -75,7 +75,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • PyClaw »
    • 
           
  • Going Further »
    • 
         
  • Setting up your own problem
    •  
@@ -263,7 +263,7 @@ 
    Setting up the Makefile
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/pyclaw/rp.html b/dev/pyclaw/rp.html
index 1d06f433c..a7c1ca6cb 100644
--- a/dev/pyclaw/rp.html
+++ b/dev/pyclaw/rp.html
@@ -6,7 +6,7 @@
     
     
 
-    Riemann Solver Package — Clawpack 5.10.x documentation
+    Riemann Solver Package — Clawpack dev documentation
     
     
     
@@ -75,7 +75,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • PyClaw »
    • 
         
  • Riemann Solver Package
    •  
       
@@ -502,7 +502,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/pyclaw/solution.html b/dev/pyclaw/solution.html
index b9c09b976..f0d2463e6 100644
--- a/dev/pyclaw/solution.html
+++ b/dev/pyclaw/solution.html
@@ -6,7 +6,7 @@
     
     
 
-    PyClaw Solutions — Clawpack 5.10.x documentation
+    PyClaw Solutions — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • PyClaw »
    • 
         
  • PyClaw Solutions
    •  
       
@@ -327,7 +327,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/pyclaw/solvers.html b/dev/pyclaw/solvers.html
index 40ff89d46..bf64a2932 100644
--- a/dev/pyclaw/solvers.html
+++ b/dev/pyclaw/solvers.html
@@ -6,7 +6,7 @@
     
     
 
-    Using PyClaw’s solvers: Classic and SharpClaw — Clawpack 5.10.x documentation
+    Using PyClaw’s solvers: Classic and SharpClaw — Clawpack dev documentation
     
     
     
@@ -75,7 +75,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • PyClaw »
    • 
           
  • Going Further »
    • 
         
  • Using PyClaw’s solvers: Classic and SharpClaw
    •  
@@ -568,7 +568,7 @@ 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/pyclaw/started.html b/dev/pyclaw/started.html
index d4ed536a7..2b75358f3 100644
--- a/dev/pyclaw/started.html
+++ b/dev/pyclaw/started.html
@@ -6,7 +6,7 @@
     
     
 
-    Installing PyClaw — Clawpack 5.10.x documentation
+    Installing PyClaw — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • PyClaw »
    • 
           
  • PyClaw Basics »
    • 
         
  • Installing PyClaw
    •  
@@ -187,7 +187,7 @@ 
    Next steps
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/pyclaw/state.html b/dev/pyclaw/state.html
index c8a028ab3..0f8196010 100644
--- a/dev/pyclaw/state.html
+++ b/dev/pyclaw/state.html
@@ -6,7 +6,7 @@
     
     
 
-    PyClaw State — Clawpack 5.10.x documentation
+    PyClaw State — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • PyClaw »
    • 
         
  • PyClaw State
    •  
       
@@ -442,7 +442,7 @@ 
    Parallel 
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/pyclaw/troubleshooting.html b/dev/pyclaw/troubleshooting.html
index 7a2e2a567..9b67a73b8 100644
--- a/dev/pyclaw/troubleshooting.html
+++ b/dev/pyclaw/troubleshooting.html
@@ -6,7 +6,7 @@
     
     
 
-    Troubleshooting — Clawpack 5.10.x documentation
+    Troubleshooting — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • PyClaw »
    • 
         
  • Troubleshooting
    •  
       
@@ -148,7 +148,7 @@ 
    Installation
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/pyclaw/tutorial.html b/dev/pyclaw/tutorial.html
index ecb632f38..a722ea8e8 100644
--- a/dev/pyclaw/tutorial.html
+++ b/dev/pyclaw/tutorial.html
@@ -6,7 +6,7 @@
     
     
 
-    PyClaw tutorial: Solve the acoustics equations — Clawpack 5.10.x documentation
+    PyClaw tutorial: Solve the acoustics equations — Clawpack dev documentation
     
     
     
@@ -75,7 +75,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • PyClaw »
    • 
           
  • PyClaw Basics »
    • 
         
  • PyClaw tutorial: Solve the acoustics equations
    •  
@@ -214,7 +214,7 @@ 
    The controller
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/pyclaw/util.html b/dev/pyclaw/util.html
index d7e651e74..2c7cfb35f 100644
--- a/dev/pyclaw/util.html
+++ b/dev/pyclaw/util.html
@@ -6,7 +6,7 @@
     
     
 
-    Pyclaw Utility Module — Clawpack 5.10.x documentation
+    Pyclaw Utility Module — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • PyClaw »
    • 
         
  • Pyclaw Utility Module
    •  
       
@@ -313,7 +313,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/python.html b/dev/python.html
index c9a2539fc..bc1faf409 100644
--- a/dev/python.html
+++ b/dev/python.html
@@ -6,7 +6,7 @@
     
     
 
-    Python Hints — Clawpack 5.10.x documentation
+    Python Hints — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • Python Hints
    •  
       
     
      
@@ -147,7 +147,7 @@ 
    Notebooks
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/python_path.html b/dev/python_path.html
index 7ad6176cd..494861c8f 100644
--- a/dev/python_path.html
+++ b/dev/python_path.html
@@ -6,7 +6,7 @@
     
     
 
-    Python path — Clawpack 5.10.x documentation
+    Python path — Clawpack dev documentation
     
     
     
@@ -66,7 +66,7 @@ 
    Navigation
    
         
  • 
           modules |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • Python path
    •  
       
     
      
@@ -261,7 +261,7 @@ 
    PYTHONPATH
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/qinit_defaults.html b/dev/qinit_defaults.html
index c82d3d83b..4911af37d 100644
--- a/dev/qinit_defaults.html
+++ b/dev/qinit_defaults.html
@@ -6,7 +6,7 @@
     
     
 
-    qinit default routines — Clawpack 5.10.x documentation
+    qinit default routines — Clawpack dev documentation
     
     
     
@@ -66,7 +66,7 @@ 
    Navigation
    
         
  • 
           modules |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • qinit default routines
    •  
       
     
      
@@ -111,7 +111,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/quick_surge.html b/dev/quick_surge.html
index 59fa81ecc..addca82e7 100644
--- a/dev/quick_surge.html
+++ b/dev/quick_surge.html
@@ -6,7 +6,7 @@
     
     
 
-    Quick start guide for storm surge modeling — Clawpack 5.10.x documentation
+    Quick start guide for storm surge modeling — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • GeoClaw Description and Detailed Contents »
    • 
         
  • Quick start guide for storm surge modeling
    •  
       
@@ -143,7 +143,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    Related Topics
    
 
      
@@ -102,7 +102,7 @@ 
    Changes to PyClaw
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/release_5_10_0.html b/dev/release_5_10_0.html
index 7dfa23dba..ade98ae05 100644
--- a/dev/release_5_10_0.html
+++ b/dev/release_5_10_0.html
@@ -6,7 +6,7 @@
     
     
 
-    v5.10.0 release notes — Clawpack 5.10.x documentation
+    v5.10.0 release notes — Clawpack dev documentation
     
     
     
@@ -66,7 +66,7 @@ 
    Navigation
    
         
  • 
           modules |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • v5.10.0 release notes
    •  
       
     
      
@@ -82,7 +82,7 @@ 
    Navigation
    
 
    Permanent DOI: http://doi.org/10.5281/zenodo.XX
    
 
    Changes relative to Clawpack 5.9.2 (November 4, 2023) are shown below.
    
 
    To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
    
+released, see Changes to master since v5.10.0.
    
 
    Follow the links to see changes that have been made to the master branch of
 each repository since the last release (v5.10.0) on XX.
    
 
    These changes should appear in the next release.  If you need them now,
@@ -268,7 +268,7 @@ 
    Other Clawpack Repositories
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/release_5_1_0.html b/dev/release_5_1_0.html
index fe2c8ecee..5f31f7b82 100644
--- a/dev/release_5_1_0.html
+++ b/dev/release_5_1_0.html
@@ -6,7 +6,7 @@
     
     
 
-    v5.1.0 release notes — Clawpack 5.10.x documentation
+    v5.1.0 release notes — Clawpack dev documentation
     
     
     
@@ -66,7 +66,7 @@ 
    Navigation
    
         
  • 
           modules |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • v5.1.0 release notes
    •  
       
     
      
@@ -211,7 +211,7 @@ 
    Changes to PyClaw
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/release_5_2_0.html b/dev/release_5_2_0.html
index a76adbab4..5971933ec 100644
--- a/dev/release_5_2_0.html
+++ b/dev/release_5_2_0.html
@@ -6,7 +6,7 @@
     
     
 
-    v5.2.0 release notes — Clawpack 5.10.x documentation
+    v5.2.0 release notes — Clawpack dev documentation
     
     
     
@@ -66,7 +66,7 @@ 
    Navigation
    
         
  • 
           modules |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • v5.2.0 release notes
    •  
       
     
      
@@ -170,7 +170,7 @@ 
    Changes to PyClaw
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/release_5_2_1.html b/dev/release_5_2_1.html
index 831b6b9da..b1bf086a7 100644
--- a/dev/release_5_2_1.html
+++ b/dev/release_5_2_1.html
@@ -6,7 +6,7 @@
     
     
 
-    v5.2.1 release notes — Clawpack 5.10.x documentation
+    v5.2.1 release notes — Clawpack dev documentation
     
     
     
@@ -66,7 +66,7 @@ 
    Navigation
    
         
  • 
           modules |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • v5.2.1 release notes
    •  
       
     
      
@@ -148,7 +148,7 @@ 
    Changes to PyClaw
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/release_5_2_2.html b/dev/release_5_2_2.html
index 70e41db16..9abbe8e52 100644
--- a/dev/release_5_2_2.html
+++ b/dev/release_5_2_2.html
@@ -6,7 +6,7 @@
     
     
 
-    v5.2.2 release notes — Clawpack 5.10.x documentation
+    v5.2.2 release notes — Clawpack dev documentation
     
     
     
@@ -66,7 +66,7 @@ 
    Navigation
    
         
  • 
           modules |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • v5.2.2 release notes
    •  
       
     
      
@@ -144,7 +144,7 @@ 
    Changes to PyClaw
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/release_5_3_0.html b/dev/release_5_3_0.html
index bc0c0a213..0442b5b00 100644
--- a/dev/release_5_3_0.html
+++ b/dev/release_5_3_0.html
@@ -6,7 +6,7 @@
     
     
 
-    v5.3.0 release notes — Clawpack 5.10.x documentation
+    v5.3.0 release notes — Clawpack dev documentation
     
     
     
@@ -66,7 +66,7 @@ 
    Navigation
    
         
  • 
           modules |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • v5.3.0 release notes
    •  
       
     
      
@@ -262,7 +262,7 @@ 
    Changes to PyClaw
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/release_5_3_1.html b/dev/release_5_3_1.html
index 87c803ba3..7ca16d00c 100644
--- a/dev/release_5_3_1.html
+++ b/dev/release_5_3_1.html
@@ -6,7 +6,7 @@
     
     
 
-    v5.3.1 release notes — Clawpack 5.10.x documentation
+    v5.3.1 release notes — Clawpack dev documentation
     
     
     
@@ -66,7 +66,7 @@ 
    Navigation
    
         
  • 
           modules |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • v5.3.1 release notes
    •  
       
     
      
@@ -179,7 +179,7 @@ 
    Changes to PyClaw
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/release_5_4_0.html b/dev/release_5_4_0.html
index ff4c376cb..02b48ea88 100644
--- a/dev/release_5_4_0.html
+++ b/dev/release_5_4_0.html
@@ -6,7 +6,7 @@
     
     
 
-    v5.4.0 release notes — Clawpack 5.10.x documentation
+    v5.4.0 release notes — Clawpack dev documentation
     
     
     
@@ -66,7 +66,7 @@ 
    Navigation
    
         
  • 
           modules |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • v5.4.0 release notes
    •  
       
     
      
@@ -287,7 +287,7 @@ 
    Changes to PyClaw
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/release_5_4_1.html b/dev/release_5_4_1.html
index 050e73ea1..7948c0c4f 100644
--- a/dev/release_5_4_1.html
+++ b/dev/release_5_4_1.html
@@ -6,7 +6,7 @@
     
     
 
-    v5.4.1 release notes — Clawpack 5.10.x documentation
+    v5.4.1 release notes — Clawpack dev documentation
     
     
     
@@ -66,7 +66,7 @@ 
    Navigation
    
         
  • 
           modules |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • v5.4.1 release notes
    •  
       
     
      
@@ -174,7 +174,7 @@ 
    Other Clawpack Repositories
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/release_5_5_0.html b/dev/release_5_5_0.html
index a038144d4..200ad0b53 100644
--- a/dev/release_5_5_0.html
+++ b/dev/release_5_5_0.html
@@ -6,7 +6,7 @@
     
     
 
-    v5.5.0 release notes — Clawpack 5.10.x documentation
+    v5.5.0 release notes — Clawpack dev documentation
     
     
     
@@ -66,7 +66,7 @@ 
    Navigation
    
         
  • 
           modules |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • v5.5.0 release notes
    •  
       
     
      
@@ -321,7 +321,7 @@ 
    Other Clawpack Repositories
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/release_5_6_0.html b/dev/release_5_6_0.html
index f6e6bfa67..cc731abdb 100644
--- a/dev/release_5_6_0.html
+++ b/dev/release_5_6_0.html
@@ -6,7 +6,7 @@
     
     
 
-    v5.6.0 release notes — Clawpack 5.10.x documentation
+    v5.6.0 release notes — Clawpack dev documentation
     
     
     
@@ -66,7 +66,7 @@ 
    Navigation
    
         
  • 
           modules |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • v5.6.0 release notes
    •  
       
     
      
@@ -81,7 +81,7 @@ 
    Navigation
    
 
    Clawpack 5.6.0 was released on June 2, 2019.  See Installing Clawpack.
    
 
    Changes relative to Clawpack 5.5.0 (Aug 28, 2018) are shown below.
    
 
    To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
    
+released, see Changes to master since v5.10.0.
    
 
    
 
    Changes that are not backward compatible
    
 
    
@@ -221,7 +221,7 @@ 
    Other Clawpack Repositories
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/release_5_6_1.html b/dev/release_5_6_1.html
index 419136ba7..04da650aa 100644
--- a/dev/release_5_6_1.html
+++ b/dev/release_5_6_1.html
@@ -6,7 +6,7 @@
     
     
 
-    v5.6.1 release notes — Clawpack 5.10.x documentation
+    v5.6.1 release notes — Clawpack dev documentation
     
     
     
@@ -66,7 +66,7 @@ 
    Navigation
    
         
  • 
           modules |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • v5.6.1 release notes
    •  
       
     
      
@@ -81,7 +81,7 @@ 
    Navigation
    
 
    Clawpack 5.6.1 was released on October 28, 2019. See Installing Clawpack.
    
 
    Changes relative to Clawpack 5.6.0 (June 2, 2019) are shown below.
    
 
    To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
    
+released, see Changes to master since v5.10.0.
    
 
    
 
    Changes that are not backward compatible
    
 
    $CLAW/amrclaw/src/2d/amr_module.f90 has changed, so do a make new in
@@ -177,7 +177,7 @@ 
    Other Clawpack Repositories
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/release_5_7_0.html b/dev/release_5_7_0.html
index bbab6dc05..6e4ac988e 100644
--- a/dev/release_5_7_0.html
+++ b/dev/release_5_7_0.html
@@ -6,7 +6,7 @@
     
     
 
-    v5.7.0 release notes — Clawpack 5.10.x documentation
+    v5.7.0 release notes — Clawpack dev documentation
     
     
     
@@ -66,7 +66,7 @@ 
    Navigation
    
         
  • 
           modules |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • v5.7.0 release notes
    •  
       
     
      
@@ -83,7 +83,7 @@ 
    Navigation
    
 [DOI 10.5281/zenodo.3764278].
    
 
    Changes relative to Clawpack 5.6.1 (October 28, 2019) are shown below.
    
 
    To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
    
+released, see Changes to master since v5.10.0.
    
 
    
 
    Python support
    
 
    As of v5.7.0 we are no longer supporting Python 2.7, and Python 3.x is
@@ -248,7 +248,7 @@ 
    Other Clawpack Repositories
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/release_5_7_1.html b/dev/release_5_7_1.html
index ce8afce5c..e409eb47e 100644
--- a/dev/release_5_7_1.html
+++ b/dev/release_5_7_1.html
@@ -6,7 +6,7 @@
     
     
 
-    v5.7.1 release notes — Clawpack 5.10.x documentation
+    v5.7.1 release notes — Clawpack dev documentation
     
     
     
@@ -66,7 +66,7 @@ 
    Navigation
    
         
  • 
           modules |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • v5.7.1 release notes
    •  
       
     
      
@@ -83,7 +83,7 @@ 
    Navigation
    
 [DOI 10.5281/zenodo.4025432].
    
 
    Changes relative to Clawpack 5.7.0 (April 23, 2020) are shown below.
    
 
    To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
    
+released, see Changes to master since v5.10.0.
    
 
    
 
    Changes that are not backward compatible
    
 
      
@@ -175,7 +175,7 @@ 
      Other Clawpack Repositories
     
 
-
      Version 5.10.x
      
+
      Version dev
      
 
      
   
      
     
      Table of Contents
      
diff --git a/dev/release_5_8_0.html b/dev/release_5_8_0.html
index 47e14bf08..ed12630ae 100644
--- a/dev/release_5_8_0.html
+++ b/dev/release_5_8_0.html
@@ -6,7 +6,7 @@
     
     
 
-    v5.8.0 release notes — Clawpack 5.10.x documentation
+    v5.8.0 release notes — Clawpack dev documentation
     
     
     
@@ -66,7 +66,7 @@ 
      Navigation
      
         
    • 
           modules |
      • 
-        
    • Clawpack 5.10.x documentation »
      • 
+        
    • Clawpack dev documentation »
      • 
         
    • v5.8.0 release notes
      •  
       
    
     
      
@@ -82,7 +82,7 @@ 
    Navigation
    
 
    Permanent DOI: http://doi.org/10.5281/zenodo.4503024
    
 
    Changes relative to Clawpack 5.7.1 (Sept. 11, 2020) are shown below.
    
 
    To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
    
+released, see Changes to master since v5.10.0.
    
 
    
 
    Changes that are not backward compatible
    
 
      
@@ -262,7 +262,7 @@ 
      Other Clawpack Repositories
     
 
-
      Version 5.10.x
      
+
      Version dev
      
 
      
   
      
     
      Table of Contents
      
diff --git a/dev/release_5_8_1.html b/dev/release_5_8_1.html
index 402f3829c..39dabb2db 100644
--- a/dev/release_5_8_1.html
+++ b/dev/release_5_8_1.html
@@ -6,7 +6,7 @@
     
     
 
-    v5.8.1 release notes — Clawpack 5.10.x documentation
+    v5.8.1 release notes — Clawpack dev documentation
     
     
     
@@ -66,7 +66,7 @@ 
      Navigation
      
         
    • 
           modules |
      • 
-        
    • Clawpack 5.10.x documentation »
      • 
+        
    • Clawpack dev documentation »
      • 
         
    • v5.8.1 release notes
      •  
       
    
     
      
@@ -84,7 +84,7 @@ 
    Navigation
    
 
    Permanent DOI: http://doi.org/10.5281/zenodo.5595424
    
 
    Changes relative to Clawpack 5.8.0 (February 4, 2021) are shown below.
    
 
    To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
    
+released, see Changes to master since v5.10.0.
    
 
    
 
    Changes that are not backward compatible
    
 
    
@@ -157,7 +157,7 @@ 
    Other Clawpack Repositories
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/release_5_8_2.html b/dev/release_5_8_2.html
index 1691e8156..79b286743 100644
--- a/dev/release_5_8_2.html
+++ b/dev/release_5_8_2.html
@@ -6,7 +6,7 @@
     
     
 
-    v5.8.2 release notes — Clawpack 5.10.x documentation
+    v5.8.2 release notes — Clawpack dev documentation
     
     
     
@@ -66,7 +66,7 @@ 
    Navigation
    
         
  • 
           modules |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • v5.8.2 release notes
    •  
       
     
      
@@ -82,7 +82,7 @@ 
    Navigation
    
 
    Permanent DOI: http://doi.org/10.5281/zenodo.5781749
    
 
    Changes relative to Clawpack 5.8.1 (October 19, 2021) are shown below.
    
 
    To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
    
+released, see Changes to master since v5.10.0.
    
 
    
 
    Changes that are not backward compatible
    
 
    None.
    
@@ -153,7 +153,7 @@ 
    Other Clawpack Repositories
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/release_5_9_0.html b/dev/release_5_9_0.html
index 425e3dbf9..bdbdca49f 100644
--- a/dev/release_5_9_0.html
+++ b/dev/release_5_9_0.html
@@ -6,7 +6,7 @@
     
     
 
-    v5.9.0 release notes — Clawpack 5.10.x documentation
+    v5.9.0 release notes — Clawpack dev documentation
     
     
     
@@ -66,7 +66,7 @@ 
    Navigation
    
         
  • 
           modules |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • v5.9.0 release notes
    •  
       
     
      
@@ -82,7 +82,7 @@ 
    Navigation
    
 
    Permanent DOI: http://doi.org/10.5281/zenodo.7026045
    
 
    Changes relative to Clawpack 5.8.2 (December 14, 2021) are shown below.
    
 
    To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
    
+released, see Changes to master since v5.10.0.
    
 
    Follow the links to see changes that have been made to the master branch of
 each repository since the last release (v5.9.0) on August 26, 2022.
    
 
    These changes should appear in the next release.  If you need them now,
@@ -224,7 +224,7 @@ 
    Other Clawpack Repositories
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/release_5_9_1.html b/dev/release_5_9_1.html
index 37dcab012..509068bbf 100644
--- a/dev/release_5_9_1.html
+++ b/dev/release_5_9_1.html
@@ -6,7 +6,7 @@
     
     
 
-    v5.9.1 release notes — Clawpack 5.10.x documentation
+    v5.9.1 release notes — Clawpack dev documentation
     
     
     
@@ -66,7 +66,7 @@ 
    Navigation
    
         
  • 
           modules |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • v5.9.1 release notes
    •  
       
     
      
@@ -82,7 +82,7 @@ 
    Navigation
    
 
    Permanent DOI: http://doi.org/10.5281/zenodo.8400237
    
 
    Changes relative to Clawpack 5.9.0 (August 26, 2022) are shown below.
    
 
    To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
    
+released, see Changes to master since v5.10.0.
    
 
    Follow the links to see changes that have been made to the master branch of
 each repository since the last release (v5.9.1) on October 2, 2023.
    
 
    These changes should appear in the next release.  If you need them now,
@@ -242,7 +242,7 @@ 
    Other Clawpack Repositories
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/release_5_9_2.html b/dev/release_5_9_2.html
index 8091f8996..0281fac44 100644
--- a/dev/release_5_9_2.html
+++ b/dev/release_5_9_2.html
@@ -6,7 +6,7 @@
     
     
 
-    v5.9.2 release notes — Clawpack 5.10.x documentation
+    v5.9.2 release notes — Clawpack dev documentation
     
     
     
@@ -66,7 +66,7 @@ 
    Navigation
    
         
  • 
           modules |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • v5.9.2 release notes
    •  
       
     
      
@@ -82,7 +82,7 @@ 
    Navigation
    
 
    Permanent DOI: http://doi.org/10.5281/zenodo.XXX
    
 
    Changes relative to Clawpack 5.9.2 (October 2, 2023) are shown below.
    
 
    To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
    
+released, see Changes to master since v5.10.0.
    
 
    Follow the links to see changes that have been made to the master branch of
 each repository since the last release (v5.9.2) on November 4, 2023.
    
 
    These changes should appear in the next release.  If you need them now,
@@ -172,7 +172,7 @@ 
    Other Clawpack Repositories
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/releases.html b/dev/releases.html
index 54c7802bf..2fe277e6b 100644
--- a/dev/releases.html
+++ b/dev/releases.html
@@ -6,7 +6,7 @@
     
     
 
-    Releases of Clawpack and release notes — Clawpack 5.10.x documentation
+    Releases of Clawpack and release notes — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • Releases of Clawpack and release notes
    •  
       
     
      
@@ -97,7 +97,7 @@ 
    Other notes:PyClaw changelog.
 Starting with v5.9.0, changes will be recorded in the release notes along
 with those for other repositories.
    • 
-
  • See Changes to master since v5.9.2 for changes to the master branch on Github
+
  • See Changes to master since v5.10.0 for changes to the master branch on Github
 that are not in the most recent release.
    • 
 
  • The “dev” branch of the
 documentation (selected under Versions on the menu
@@ -114,8 +114,8 @@ 
    Releases:10.17605/osf.io/kmw6h.
 See Citing this work for more information on how best to cite Clawpack.
    
 
     
    •   
@@ -176,7 +176,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/riemann.html b/dev/riemann.html
index 0199aa8b5..cabe39018 100644
--- a/dev/riemann.html
+++ b/dev/riemann.html
@@ -6,7 +6,7 @@
     
     
 
-    Riemann solvers — Clawpack 5.10.x documentation
+    Riemann solvers — Clawpack dev documentation
     
     
     
@@ -75,7 +75,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • Riemann solvers
    •  
       
     
      
@@ -307,7 +307,7 @@ 
    Adding a solver to the Riemann repository
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/riemann/Shallow_water_Riemann_solvers.html b/dev/riemann/Shallow_water_Riemann_solvers.html
index be8c0676f..0c4793b78 100644
--- a/dev/riemann/Shallow_water_Riemann_solvers.html
+++ b/dev/riemann/Shallow_water_Riemann_solvers.html
@@ -6,7 +6,7 @@
     
     
 
-    Shallow water Riemann solvers in Clawpack — Clawpack 5.10.x documentation
+    Shallow water Riemann solvers in Clawpack — Clawpack dev documentation
     
     
     
@@ -75,7 +75,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • Shallow water Riemann solvers in Clawpack
    •  
       
     
      
@@ -282,7 +282,7 @@ 
    HLL
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/ruled_rectangles.html b/dev/ruled_rectangles.html
index 34f44e3e6..6b564f4ac 100644
--- a/dev/ruled_rectangles.html
+++ b/dev/ruled_rectangles.html
@@ -6,7 +6,7 @@
     
     
 
-    Ruled Rectangles — Clawpack 5.10.x documentation
+    Ruled Rectangles — Clawpack dev documentation
     
     
     
@@ -75,7 +75,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • AMRClaw Description and Detailed Contents »
    • 
         
  • Ruled Rectangles
    •  
       
@@ -559,7 +559,7 @@ 
    Example covering the continental shelf
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/sealevel.html b/dev/sealevel.html
index d1308bf87..41bf2fd34 100644
--- a/dev/sealevel.html
+++ b/dev/sealevel.html
@@ -6,7 +6,7 @@
     
     
 
-    Setting sea_level — Clawpack 5.10.x documentation
+    Setting sea_level — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • GeoClaw Description and Detailed Contents »
    • 
         
  • Setting sea_level
    •  
       
@@ -150,7 +150,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    Related Topics
    
 
      
@@ -121,7 +121,7 @@ 
    Search
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    Related Topics
    
 
      
   
    • Documentation overview
        
diff --git a/dev/searchindex.js b/dev/searchindex.js
index 3618dfb10..fc29536ce 100644
--- a/dev/searchindex.js
+++ b/dev/searchindex.js
@@ -1 +1 @@
-Search.setIndex({"docnames": ["ClawPlotAxes", "ClawPlotData", "ClawPlotFigure", "ClawPlotItem", "about", "adjoint", "amr_algorithm", "amrclaw", "amrclaw1d", "amrclaw_doxygen", "amrclaw_flowcharts", "application_documentation", "apps", "aws", "b4run", "b4step_defaults", "bc", "biblio", "bouss1d", "bouss2d", "changes_to_master", "claw43to46", "claw46to50", "claw4x", "clawpack5", "clawpack_components", "community", "contents", "contribute_apps", "current_data", "developers", "docker_image", "dtopotools_module", "f77_vs_f90", "fgmax", "fgmax_tools_module", "fgout", "fgout_tools_module", "first_run", "first_run_fortran", "first_run_pyclaw", "flagregions", "force_dry", "fortran", "fortran_compilers", "fvmbook", "galleries", "gauges", "geoclaw", "geoclaw1d", "geoclaw_started", "geoclaw_util_module", "geohints", "geoplot", "git_versions", "googleearth_plotting", "gpu", "grid_registration", "howto_doc", "howto_release", "installing", "installing_fortcodes", "installing_pip", "kmltools_module", "lagrangian_gauges", "license", "makefiles", "makefiles_library", "manning", "mapc2p", "marching_front", "matlab_plotting", "nearshore_interp", "netcdf", "newapp", "okada", "openmp", "output_styles", "packages", "photos", "plotexamples", "plotting", "plotting_faq", "plotting_geoclaw", "plotting_python", "prereqs", "pyclaw/about", "pyclaw/basics", "pyclaw/classes", "pyclaw/clawpack_and_pyclaw", "pyclaw/cloud", "pyclaw/controller", "pyclaw/evolve/limiters", "pyclaw/examples", "pyclaw/geometry", "pyclaw/going_further", "pyclaw/index", "pyclaw/io", "pyclaw/output", "pyclaw/parallel", "pyclaw/plotting", "pyclaw/problem", "pyclaw/rp", "pyclaw/solution", "pyclaw/solvers", "pyclaw/started", "pyclaw/state", "pyclaw/troubleshooting", "pyclaw/tutorial", "pyclaw/util", "python", "python_path", "qinit_defaults", "quick_surge", "quick_tsunami", "refinement", "regression", "release_5_0_0", "release_5_10_0", "release_5_1_0", "release_5_2_0", "release_5_2_1", "release_5_2_2", "release_5_3_0", "release_5_3_1", "release_5_4_0", "release_5_4_1", "release_5_5_0", "release_5_6_0", "release_5_6_1", "release_5_7_0", "release_5_7_1", "release_5_8_0", "release_5_8_1", "release_5_8_2", "release_5_9_0", "release_5_9_1", "release_5_9_2", "releases", "restart", "riemann", "riemann/Shallow_water_Riemann_solvers", "ruled_rectangles", "sealevel", "set_eta_init", "setaux_defaults", "setenv", "setplot", "setrun", "setrun_amrclaw", "setrun_amrclaw_sample", "setrun_geoclaw", "setrun_sample", "sharing", "sphere_source", "sphinxdoc", "src1d_defaults", "src_defaults", "storm_module", "surgedata", "testing", "timing", "topo", "topotools", "topotools_module", "trouble", "tsunamidata", "user_routines", "visit_plotting", "vm", "wp_algorithms"], "filenames": ["ClawPlotAxes.rst", "ClawPlotData.rst", "ClawPlotFigure.rst", "ClawPlotItem.rst", "about.rst", "adjoint.rst", "amr_algorithm.rst", "amrclaw.rst", "amrclaw1d.rst", "amrclaw_doxygen.rst", "amrclaw_flowcharts.rst", "application_documentation.rst", "apps.rst", "aws.rst", "b4run.rst", "b4step_defaults.rst", "bc.rst", "biblio.rst", "bouss1d.rst", "bouss2d.rst", "changes_to_master.rst", "claw43to46.rst", "claw46to50.rst", "claw4x.rst", "clawpack5.rst", "clawpack_components.rst", "community.rst", "contents.rst", "contribute_apps.rst", "current_data.rst", "developers.rst", "docker_image.rst", "dtopotools_module.rst", "f77_vs_f90.rst", "fgmax.rst", "fgmax_tools_module.rst", "fgout.rst", "fgout_tools_module.rst", "first_run.rst", "first_run_fortran.rst", "first_run_pyclaw.rst", "flagregions.rst", "force_dry.rst", "fortran.rst", "fortran_compilers.rst", "fvmbook.rst", "galleries.rst", "gauges.rst", "geoclaw.rst", "geoclaw1d.rst", "geoclaw_started.rst", "geoclaw_util_module.rst", "geohints.rst", "geoplot.rst", "git_versions.rst", "googleearth_plotting.rst", "gpu.rst", "grid_registration.rst", "howto_doc.rst", "howto_release.rst", "installing.rst", "installing_fortcodes.rst", "installing_pip.rst", "kmltools_module.rst", "lagrangian_gauges.rst", "license.rst", "makefiles.rst", "makefiles_library.rst", "manning.rst", "mapc2p.rst", "marching_front.rst", "matlab_plotting.rst", "nearshore_interp.rst", "netcdf.rst", "newapp.rst", "okada.rst", "openmp.rst", "output_styles.rst", "packages.rst", "photos.rst", "plotexamples.rst", "plotting.rst", "plotting_faq.rst", "plotting_geoclaw.rst", "plotting_python.rst", "prereqs.rst", "pyclaw/about.rst", "pyclaw/basics.rst", "pyclaw/classes.rst", "pyclaw/clawpack_and_pyclaw.rst", "pyclaw/cloud.rst", "pyclaw/controller.rst", "pyclaw/evolve/limiters.rst", "pyclaw/examples.rst", "pyclaw/geometry.rst", "pyclaw/going_further.rst", "pyclaw/index.rst", "pyclaw/io.rst", "pyclaw/output.rst", "pyclaw/parallel.rst", "pyclaw/plotting.rst", "pyclaw/problem.rst", "pyclaw/rp.rst", "pyclaw/solution.rst", "pyclaw/solvers.rst", "pyclaw/started.rst", "pyclaw/state.rst", "pyclaw/troubleshooting.rst", "pyclaw/tutorial.rst", "pyclaw/util.rst", "python.rst", "python_path.rst", "qinit_defaults.rst", "quick_surge.rst", "quick_tsunami.rst", "refinement.rst", "regression.rst", "release_5_0_0.rst", "release_5_10_0.rst", "release_5_1_0.rst", "release_5_2_0.rst", "release_5_2_1.rst", "release_5_2_2.rst", "release_5_3_0.rst", "release_5_3_1.rst", "release_5_4_0.rst", "release_5_4_1.rst", "release_5_5_0.rst", "release_5_6_0.rst", "release_5_6_1.rst", "release_5_7_0.rst", "release_5_7_1.rst", "release_5_8_0.rst", "release_5_8_1.rst", "release_5_8_2.rst", "release_5_9_0.rst", "release_5_9_1.rst", "release_5_9_2.rst", "releases.rst", "restart.rst", "riemann.rst", "riemann/Shallow_water_Riemann_solvers.rst", "ruled_rectangles.rst", "sealevel.rst", "set_eta_init.rst", "setaux_defaults.rst", "setenv.rst", "setplot.rst", "setrun.rst", "setrun_amrclaw.rst", "setrun_amrclaw_sample.rst", "setrun_geoclaw.rst", "setrun_sample.rst", "sharing.rst", "sphere_source.rst", "sphinxdoc.rst", "src1d_defaults.rst", "src_defaults.rst", "storm_module.rst", "surgedata.rst", "testing.rst", "timing.rst", "topo.rst", "topotools.rst", "topotools_module.rst", "trouble.rst", "tsunamidata.rst", "user_routines.rst", "visit_plotting.rst", "vm.rst", "wp_algorithms.rst"], "titles": ["ClawPlotAxes", "ClawPlotData", "ClawPlotFigure", "ClawPlotItem", "About this software", "Guiding AMR with adjoint flagging", "Adaptive mesh refinement (AMR) algorithms", "AMRClaw Description and Detailed Contents", "AMRClaw for 1d problems", "Doxygen documentation of AMRClaw", "AMRClaw Flowcharts", "Application documentation", "Clawpack Applications repository", "Amazon Web Services EC2 Clawpack AMI", "b4run function", "b4step default routines", "Boundary conditions", "Bibliography", "Boussinesq solvers in One Space Dimension", "Boussinesq solvers in Two Space Dimensions", "Changes to master since v5.9.2", "Converting from Clawpack 4.3 to 4.6", "Converting from Clawpack 4.6 to 5.0", "Clawpack 4.x links", "Changes in Clawpack 5.0", "Clawpack components", "Clawpack Community", "Full Table of Contents", "Contributing examples and applications", "current_data", "Developers\u2019 Guide", "Docker for Clawpack", "dtopotools module for moving topography", "Fortran 77 vs. Fortran 90 files", "Fixed grid monitoring (fgmax)", "fgmax_tools module for working with fgmax grids", "Fixed grid output (fgout)", "fgout_tools module for working with fgout grids", "Running an example", "Testing your Fortran installation and running an example", "Testing a PyClaw installation and running an example", "Specifying flagregions for adaptive refinement", "Force Cells to be Dry Initially", "Fortran version", "Fortran Compilers", "Examples from the book FVMHP", "Clawpack Gallery", "Gauges", "GeoClaw Description and Detailed Contents", "GeoClaw in One Space Dimension", "Getting started with GeoClaw", "geoclaw.util module of utility functions", "Cautionary Hints on using GeoClaw", "GeoClaw plotting tools", "Keeping track of repository versions with Git", "Visualizing GeoClaw results in Google Earth", "Using the GPU version of Clawpack", "Grid registration", "Guide for updating this documentation", "Guide for doing a Clawpack release", "Installing Clawpack", "Options for installing Clawpack Fortran codes", "pip install instructions", "kmltools module of utility functions", "Lagrangian gauges for particle tracking", "License", "Clawpack Makefiles", "Library routines in Makefiles", "Manning friction term", "The mapc2p function", "Marching Front algorithm", "Plotting using Matlab", "Nearshore interpolation", "Using NetCDF output", "Creating a new application directory", "Earthquake sources: Fault slip and the Okada model", "Using OpenMP", "Output data sytles and formats", "Which Clawpack solver should I use?", "Clawpack Community Photos", "Plotting examples", "Plotting with Visclaw", "Plotting hints and FAQ", "Plotting routines for GeoClaw", "Plotting options in Python", "Installation Prerequisites", "About PyClaw", "PyClaw Basics", "Understanding Pyclaw Classes", "Porting a problem from Clawpack 4.6.x to PyClaw", "Running PyClaw in the cloud", "Pyclaw Controller Class", "Pyclaw Limiters", "Working with PyClaw\u2019s built-in examples", "PyClaw Geometry", "Going Further", "PyClaw", "Pyclaw Input/Output Package", "PyClaw output", "Running in parallel", "Plotting PyClaw results", "Setting up your own problem", "Riemann Solver Package", "PyClaw Solutions", "Using PyClaw\u2019s solvers: Classic and SharpClaw", "Installing PyClaw", "PyClaw State", "Troubleshooting", "PyClaw tutorial: Solve the acoustics equations", "Pyclaw Utility Module", "Python Hints", "Python path", "qinit default routines", "Quick start guide for storm surge modeling", "Quick start guide for tsunami modeling", "AMR refinement criteria", "Regression testing", "v5.0.0 release notes", "v5.10.0 release notes", "v5.1.0 release notes", "v5.2.0 release notes", "v5.2.1 release notes", "v5.2.2 release notes", "v5.3.0 release notes", "v5.3.1 release notes", "v5.4.0 release notes", "v5.4.1 release notes", "v5.5.0 release notes", "v5.6.0 release notes", "v5.6.1 release notes", "v5.7.0 release notes", "v5.7.1 release notes", "v5.8.0 release notes", "v5.8.1 release notes", "v5.8.2 release notes", "v5.9.0 release notes", "v5.9.1 release notes", "v5.9.2 release notes", "Releases of Clawpack and release notes", "Checkpointing and restarting", "Riemann solvers", "Shallow water Riemann solvers in Clawpack", "Ruled Rectangles", "Setting sea_level", "Set Eta Init \u2013 spatially varying initial surface elevation", "setaux default routines", "Set environment variables", "Using setplot.py to specify the desired plots", "Specifying classic run-time parameters in setrun.py", "Specifying AMRClaw run-time parameters in setrun.py", "Sample setrun.py module for AMRClaw", "Specifying GeoClaw parameters in setrun.py", "Sample setrun.py module for classic Clawpack", "Saving and sharing results", "Source terms for shallow water on the sphere", "Compiling the Sphinx documentation locally", "src1d default routines", "src default routines", "Storm Specification Class and Tools", "Sources for Storm Surge Data", "Testing your installation", "Timing Statistics", "Topography data", "Python tools for working with topo and dtopo", "topotools module for working with topography data", "Troubleshooting", "Some sources of tsunami data", "User files required for the Fortran code", "Plotting with VisIt", "Clawpack Virtual Machine", "Wave-propagation algorithms"], "terms": {"For": [0, 1, 2, 3, 5, 7, 8, 9, 10, 12, 13, 16, 17, 18, 19, 21, 24, 26, 27, 28, 29, 30, 31, 32, 34, 36, 38, 40, 41, 42, 44, 45, 47, 49, 51, 52, 53, 55, 57, 58, 59, 66, 67, 70, 71, 72, 75, 76, 77, 81, 82, 84, 85, 88, 89, 93, 94, 96, 97, 98, 99, 101, 104, 105, 109, 110, 111, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 138, 140, 141, 142, 143, 144, 147, 148, 149, 150, 151, 152, 155, 158, 159, 161, 162, 164, 166, 167, 170], "usag": [0, 1, 2, 3, 13, 19, 48, 49, 51, 55, 60, 97, 127, 158, 164], "see": [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 12, 13, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 30, 31, 32, 34, 36, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 55, 56, 57, 58, 59, 60, 61, 62, 64, 65, 66, 67, 68, 70, 71, 72, 74, 75, 76, 77, 80, 81, 82, 83, 84, 85, 86, 89, 91, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 146, 147, 148, 149, 150, 151, 153, 155, 156, 157, 158, 160, 161, 162, 164, 165, 166, 167, 168, 169, 170], "us": [0, 1, 2, 3, 4, 6, 7, 8, 9, 10, 11, 12, 14, 16, 17, 21, 22, 23, 24, 25, 26, 28, 29, 30, 32, 34, 35, 37, 38, 39, 40, 42, 43, 44, 45, 47, 48, 49, 50, 51, 53, 54, 55, 57, 58, 59, 60, 61, 63, 65, 66, 68, 70, 72, 74, 75, 77, 80, 81, 82, 83, 84, 85, 86, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 99, 100, 102, 103, 105, 106, 108, 109, 110, 111, 112, 113, 115, 116, 118, 120, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 135, 136, 137, 138, 139, 142, 143, 146, 148, 149, 150, 151, 152, 154, 156, 157, 158, 161, 162, 164, 166, 168, 169, 170], "setplot": [0, 1, 2, 3, 7, 21, 22, 24, 27, 45, 47, 48, 49, 80, 81, 100, 101, 109, 118, 125, 135, 136, 165, 168], "py": [0, 1, 2, 3, 5, 6, 7, 8, 11, 13, 14, 16, 21, 22, 27, 30, 32, 34, 35, 37, 38, 39, 40, 41, 42, 43, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 58, 59, 63, 64, 66, 68, 70, 75, 77, 78, 80, 81, 83, 84, 89, 93, 96, 99, 100, 101, 105, 113, 115, 116, 118, 119, 120, 121, 122, 123, 124, 125, 127, 128, 129, 130, 131, 132, 135, 136, 137, 139, 140, 141, 143, 144, 146, 154, 158, 162, 164, 165, 167, 168], "specifi": [0, 1, 2, 3, 4, 5, 6, 7, 15, 16, 18, 19, 22, 24, 27, 29, 30, 31, 32, 34, 35, 36, 37, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 54, 55, 57, 63, 66, 67, 68, 70, 71, 72, 75, 76, 77, 78, 80, 81, 83, 88, 91, 94, 97, 98, 101, 103, 104, 107, 109, 111, 112, 113, 116, 119, 122, 123, 124, 125, 126, 127, 130, 132, 135, 136, 137, 139, 140, 142, 143, 144, 145, 150, 152, 153, 156, 157, 158, 159, 161, 162, 164, 165, 166, 168, 170], "desir": [0, 1, 2, 3, 6, 7, 16, 19, 24, 27, 28, 32, 34, 35, 36, 37, 42, 45, 47, 49, 59, 62, 63, 64, 70, 72, 75, 77, 80, 81, 82, 84, 88, 89, 91, 98, 103, 104, 112, 125, 127, 130, 144, 146, 148, 149, 150, 151, 152, 158, 162, 164, 165], "exampl": [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 13, 14, 16, 18, 22, 24, 26, 29, 30, 31, 32, 37, 41, 43, 44, 46, 48, 49, 51, 57, 58, 59, 60, 61, 63, 64, 66, 67, 68, 72, 75, 76, 77, 81, 82, 84, 86, 87, 88, 89, 91, 94, 95, 97, 98, 101, 102, 103, 104, 105, 108, 109, 110, 111, 113, 114, 115, 116, 118, 119, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 135, 136, 137, 139, 140, 141, 143, 144, 146, 147, 148, 149, 150, 151, 152, 153, 154, 158, 160, 161, 162, 164, 165, 166, 167], "object": [0, 1, 2, 3, 5, 18, 24, 29, 32, 34, 36, 37, 41, 47, 55, 63, 70, 75, 81, 82, 84, 88, 89, 91, 97, 98, 99, 101, 103, 106, 107, 108, 109, 119, 128, 136, 137, 139, 140, 148, 149, 150, 151, 152, 158, 164], "thi": [0, 1, 2, 3, 5, 6, 8, 10, 11, 12, 13, 14, 16, 17, 18, 19, 20, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 54, 55, 56, 57, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 70, 71, 72, 73, 75, 76, 77, 81, 82, 84, 85, 86, 88, 89, 91, 92, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 113, 114, 115, 116, 118, 119, 120, 122, 123, 124, 125, 126, 127, 128, 129, 130, 132, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 158, 159, 160, 161, 162, 164, 165, 166, 167, 168, 169, 170], "class": [0, 1, 2, 3, 5, 27, 32, 34, 35, 36, 37, 41, 55, 63, 75, 82, 84, 89, 94, 96, 101, 103, 104, 106, 108, 109, 110, 128, 130, 139, 142, 147, 148, 149, 150, 151, 152, 164], "ar": [0, 1, 2, 3, 4, 5, 6, 7, 9, 10, 12, 13, 15, 16, 18, 19, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 52, 53, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 70, 71, 75, 76, 77, 78, 81, 83, 84, 85, 86, 88, 89, 91, 92, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 119, 120, 121, 122, 123, 124, 125, 126, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 147, 148, 149, 150, 151, 152, 154, 155, 156, 157, 158, 159, 160, 161, 162, 164, 165, 167, 170], "usual": [0, 2, 3, 5, 6, 19, 32, 36, 42, 47, 50, 55, 63, 66, 75, 77, 93, 94, 99, 101, 102, 104, 109, 113, 115, 125, 140, 148, 149, 150, 151, 152, 165, 167], "creat": [0, 1, 2, 3, 5, 6, 7, 21, 26, 27, 30, 32, 34, 35, 36, 37, 38, 39, 41, 43, 45, 47, 48, 49, 50, 54, 56, 58, 62, 63, 66, 75, 77, 81, 82, 84, 89, 90, 93, 94, 96, 97, 100, 103, 106, 107, 108, 109, 115, 116, 118, 119, 123, 124, 125, 127, 128, 129, 132, 135, 142, 147, 148, 149, 150, 153, 155, 158, 164, 166, 167, 168], "new_plotax": [0, 2, 47, 55, 82, 147], "clawplotfigur": [0, 1, 55, 82, 136, 147], "The": [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 20, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 32, 34, 36, 37, 38, 39, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 56, 57, 58, 59, 61, 62, 63, 64, 65, 66, 67, 68, 72, 74, 75, 76, 77, 78, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 91, 92, 94, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 109, 110, 111, 113, 115, 116, 118, 119, 120, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 160, 161, 162, 164, 165, 166, 167, 168, 169, 170], "follow": [0, 2, 3, 4, 5, 6, 13, 16, 18, 19, 20, 21, 25, 26, 30, 32, 34, 38, 39, 40, 42, 47, 50, 55, 57, 58, 59, 60, 62, 65, 70, 71, 75, 77, 82, 83, 85, 86, 88, 89, 90, 93, 94, 97, 98, 99, 101, 102, 103, 105, 106, 108, 109, 111, 116, 118, 127, 132, 135, 136, 137, 139, 140, 142, 146, 147, 148, 149, 151, 158, 160, 161, 162, 165, 167, 169], "can": [0, 2, 3, 4, 5, 6, 7, 8, 9, 11, 12, 13, 14, 15, 16, 18, 19, 21, 22, 24, 26, 28, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 66, 67, 68, 70, 71, 72, 74, 75, 76, 77, 78, 80, 81, 82, 83, 84, 86, 88, 89, 90, 92, 93, 94, 96, 97, 98, 99, 100, 101, 103, 104, 105, 106, 107, 108, 109, 111, 112, 113, 115, 116, 118, 119, 120, 123, 124, 125, 126, 127, 130, 131, 132, 135, 137, 138, 139, 140, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 156, 157, 158, 160, 162, 164, 165, 166, 167, 168, 170], "set": [0, 1, 2, 3, 5, 6, 8, 13, 14, 15, 16, 18, 19, 24, 27, 29, 30, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 51, 52, 53, 54, 55, 58, 59, 61, 62, 63, 64, 66, 67, 70, 72, 74, 75, 76, 77, 78, 80, 81, 88, 89, 91, 93, 94, 95, 96, 97, 98, 99, 102, 103, 104, 105, 106, 107, 108, 109, 111, 112, 115, 116, 118, 119, 120, 123, 124, 125, 127, 129, 130, 132, 135, 136, 137, 139, 140, 141, 142, 145, 147, 148, 149, 150, 151, 152, 153, 154, 158, 159, 162, 164, 166, 167, 170], "user": [0, 2, 3, 4, 5, 6, 12, 13, 21, 22, 24, 25, 27, 28, 29, 30, 31, 34, 36, 37, 44, 49, 52, 55, 60, 62, 63, 68, 71, 75, 77, 82, 89, 90, 93, 97, 99, 107, 109, 110, 111, 115, 123, 125, 127, 129, 136, 137, 140, 148, 150, 151, 152, 155, 164, 170], "name": [0, 1, 2, 3, 5, 7, 11, 12, 13, 18, 19, 22, 24, 30, 31, 32, 35, 36, 37, 38, 39, 41, 42, 43, 47, 49, 55, 58, 59, 63, 65, 71, 82, 84, 86, 89, 91, 93, 94, 97, 98, 102, 103, 108, 109, 111, 118, 124, 127, 132, 139, 140, 142, 147, 148, 149, 150, 151, 152, 158, 164, 167, 168], "str": [0, 1, 3, 32, 63, 97, 148, 149, 158, 164], "axescmd": [0, 84], "command": [0, 1, 2, 3, 11, 13, 14, 19, 30, 43, 54, 55, 56, 59, 61, 62, 66, 74, 81, 82, 85, 88, 89, 91, 96, 99, 100, 104, 108, 109, 110, 111, 116, 136, 140, 146, 147, 148, 149, 162, 164], "ax": [0, 1, 2, 29, 32, 47, 55, 63, 71, 81, 82, 84, 147, 164], "subplot": [0, 32, 70, 84, 142], "1": [0, 2, 3, 4, 5, 6, 7, 8, 9, 13, 14, 15, 16, 17, 18, 19, 24, 32, 34, 35, 36, 38, 39, 40, 41, 47, 48, 49, 51, 52, 53, 55, 57, 58, 59, 62, 63, 64, 66, 71, 75, 77, 82, 84, 88, 89, 91, 92, 93, 94, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 115, 120, 122, 123, 125, 127, 128, 130, 132, 134, 138, 139, 140, 141, 142, 143, 145, 147, 148, 149, 150, 151, 152, 154, 158, 161, 162, 164, 165, 166, 167, 170], "singl": [0, 1, 2, 3, 5, 6, 16, 21, 24, 25, 29, 30, 32, 34, 36, 37, 42, 47, 49, 50, 55, 57, 58, 59, 63, 64, 66, 71, 75, 76, 77, 78, 88, 94, 97, 98, 103, 109, 116, 122, 123, 125, 138, 140, 144, 148, 149, 150, 151, 162, 164, 166, 167], "fill": [0, 3, 4, 6, 16, 26, 55, 70, 94, 97, 106, 113, 125, 144, 148, 158, 161, 164, 167], "figur": [0, 1, 2, 4, 13, 32, 38, 39, 42, 45, 47, 57, 63, 70, 71, 81, 84, 103, 111, 118, 135, 140, 142, 147, 164], "2": [0, 3, 4, 6, 7, 15, 16, 17, 18, 19, 24, 32, 34, 35, 36, 37, 41, 42, 47, 49, 51, 55, 57, 59, 61, 62, 63, 64, 68, 70, 71, 72, 75, 76, 77, 82, 84, 85, 88, 89, 91, 92, 94, 97, 98, 99, 101, 102, 103, 104, 105, 106, 108, 109, 111, 115, 116, 118, 119, 123, 124, 125, 127, 128, 129, 130, 131, 132, 133, 135, 136, 138, 139, 140, 142, 145, 148, 149, 150, 151, 152, 154, 158, 161, 162, 164, 167, 170], "top": [0, 1, 3, 11, 25, 31, 32, 36, 55, 58, 59, 61, 62, 75, 82, 96, 101, 102, 111, 116, 139, 146], "half": [0, 16, 17, 75, 77, 104, 135, 148, 167], "0": [0, 2, 3, 5, 6, 16, 18, 19, 21, 27, 29, 30, 32, 34, 36, 37, 41, 42, 47, 48, 49, 51, 52, 55, 56, 57, 58, 59, 63, 64, 66, 67, 68, 70, 71, 72, 75, 77, 82, 84, 85, 88, 89, 91, 92, 94, 97, 98, 99, 101, 102, 103, 104, 105, 106, 108, 109, 110, 111, 115, 121, 122, 124, 126, 129, 131, 133, 136, 138, 139, 141, 142, 143, 144, 148, 149, 150, 151, 152, 154, 161, 162, 164, 166, 167, 169, 170], "8": [0, 34, 36, 42, 47, 55, 58, 63, 70, 77, 82, 94, 107, 109, 117, 118, 129, 135, 138, 140, 142, 147, 148, 149, 151, 152], "tall": 0, "skinni": 0, "axi": [0, 32, 42, 49, 53, 55, 70, 71, 82, 94, 136, 142], "matplotlib": [0, 2, 3, 13, 32, 42, 53, 55, 70, 81, 82, 85, 87, 90, 110, 131, 141, 147, 164, 165], "document": [0, 1, 2, 3, 6, 7, 19, 20, 23, 24, 25, 26, 27, 30, 31, 34, 48, 52, 57, 62, 65, 75, 81, 82, 83, 84, 86, 92, 94, 97, 98, 99, 100, 104, 106, 109, 111, 118, 120, 133, 134, 135, 136, 137, 138, 147, 150, 154, 168, 169], "show": [0, 2, 3, 9, 10, 12, 14, 30, 32, 38, 39, 42, 46, 47, 55, 58, 59, 63, 66, 70, 71, 84, 94, 104, 108, 111, 116, 118, 123, 133, 134, 135, 142, 164, 165, 167], "bool": [0, 1, 2, 3, 51, 63, 91, 97, 102, 103, 104, 106, 109, 151, 158, 164], "If": [0, 1, 2, 3, 4, 5, 6, 12, 13, 15, 16, 18, 19, 20, 21, 22, 24, 25, 26, 27, 29, 30, 31, 32, 34, 36, 37, 38, 39, 40, 42, 43, 44, 47, 49, 51, 55, 57, 58, 59, 60, 61, 62, 63, 64, 66, 67, 68, 70, 71, 72, 75, 76, 77, 78, 80, 81, 82, 84, 85, 86, 88, 93, 94, 96, 97, 98, 99, 101, 103, 104, 105, 106, 107, 109, 111, 113, 114, 115, 116, 118, 125, 126, 127, 128, 129, 130, 132, 135, 136, 137, 139, 140, 141, 142, 143, 144, 145, 146, 148, 149, 150, 151, 152, 156, 157, 158, 160, 162, 164, 165, 167, 170], "fals": [0, 1, 2, 3, 5, 32, 37, 42, 52, 53, 54, 55, 63, 70, 77, 91, 94, 97, 102, 103, 104, 106, 109, 124, 125, 130, 135, 139, 141, 148, 149, 150, 151, 152, 158, 164], "suppress": [0, 2, 3, 30, 55, 63, 124, 126, 148, 149], "all": [0, 1, 4, 6, 11, 12, 13, 16, 19, 22, 24, 25, 27, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 42, 43, 44, 47, 48, 51, 52, 54, 55, 57, 58, 59, 60, 61, 63, 64, 65, 66, 67, 71, 72, 74, 75, 76, 77, 78, 81, 82, 84, 85, 86, 88, 91, 92, 94, 96, 97, 98, 99, 101, 102, 103, 104, 106, 109, 110, 111, 114, 115, 116, 118, 119, 120, 123, 124, 125, 127, 130, 132, 138, 139, 140, 141, 142, 144, 147, 148, 149, 150, 151, 152, 153, 159, 160, 161, 162, 164, 165, 167], "item": [0, 1, 3, 71, 81, 84, 109, 132, 137, 147], "titl": [0, 1, 4, 17, 26, 42, 47, 55, 63, 70, 81, 96, 125, 136, 142, 164], "appear": [0, 1, 3, 5, 8, 13, 20, 25, 30, 34, 36, 47, 48, 49, 55, 58, 63, 66, 69, 82, 98, 103, 106, 118, 125, 132, 135, 136, 137, 151, 153, 162], "default": [0, 1, 2, 3, 13, 18, 19, 24, 30, 32, 34, 36, 37, 44, 47, 48, 51, 53, 54, 55, 57, 62, 63, 64, 66, 67, 71, 72, 75, 76, 77, 82, 84, 88, 91, 93, 94, 97, 98, 99, 100, 103, 104, 106, 107, 109, 115, 118, 119, 125, 129, 130, 132, 135, 136, 137, 139, 143, 149, 150, 151, 154, 158, 162, 164, 167], "string": [0, 1, 3, 7, 32, 34, 37, 47, 49, 51, 55, 57, 63, 64, 82, 89, 91, 92, 94, 97, 98, 103, 109, 111, 118, 136, 148, 151, 158, 164], "new": [0, 1, 2, 4, 5, 6, 8, 12, 13, 19, 20, 22, 24, 26, 27, 30, 31, 32, 34, 35, 36, 37, 41, 42, 43, 44, 47, 48, 51, 55, 56, 57, 59, 62, 63, 64, 66, 67, 68, 70, 71, 76, 77, 82, 84, 87, 88, 89, 90, 91, 97, 99, 101, 104, 106, 113, 115, 118, 119, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 135, 136, 137, 139, 140, 142, 143, 144, 146, 148, 149, 151, 158, 162, 164, 167], "v5": [0, 5, 14, 30, 31, 34, 36, 41, 45, 47, 56, 58, 59, 61, 62, 67, 77, 103, 110, 111, 115, 138, 139, 143, 144, 149, 151, 154], "9": [0, 34, 36, 37, 42, 47, 55, 59, 61, 62, 63, 64, 77, 82, 94, 97, 103, 118, 125, 128, 129, 130, 131, 132, 133, 134, 138, 139, 142, 148, 151, 152, 154], "note": [0, 1, 3, 4, 5, 13, 15, 16, 19, 22, 24, 26, 27, 30, 32, 34, 35, 36, 37, 41, 42, 43, 44, 47, 49, 51, 55, 56, 57, 58, 59, 60, 61, 62, 63, 66, 67, 70, 75, 76, 82, 84, 89, 92, 93, 94, 96, 97, 99, 101, 102, 105, 106, 109, 110, 112, 115, 139, 140, 142, 143, 144, 145, 147, 148, 149, 150, 151, 152, 156, 157, 158, 159, 161, 162, 164, 166, 167], "now": [0, 5, 6, 7, 13, 20, 22, 24, 26, 28, 30, 31, 32, 34, 35, 36, 37, 41, 42, 44, 54, 57, 58, 59, 68, 70, 72, 75, 77, 82, 88, 89, 94, 96, 97, 98, 99, 100, 101, 103, 104, 105, 108, 113, 115, 116, 118, 119, 120, 123, 124, 125, 126, 127, 129, 130, 132, 133, 135, 136, 137, 143, 147, 149, 153, 162, 169], "includ": [0, 2, 4, 6, 13, 18, 19, 20, 23, 24, 25, 29, 30, 31, 32, 34, 36, 37, 38, 39, 41, 43, 44, 46, 47, 49, 52, 55, 57, 59, 61, 62, 63, 65, 67, 68, 70, 71, 72, 75, 76, 78, 81, 82, 84, 86, 88, 89, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 108, 111, 113, 115, 116, 118, 119, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 140, 141, 142, 146, 148, 150, 151, 153, 154, 155, 158, 159, 161, 162, 164, 167], "h": [0, 16, 17, 18, 19, 34, 36, 37, 42, 47, 48, 49, 52, 55, 56, 63, 68, 72, 102, 115, 123, 130, 136, 141, 143, 144, 151, 162], "m": [0, 4, 17, 18, 22, 24, 30, 32, 47, 48, 51, 55, 56, 58, 59, 63, 70, 71, 75, 77, 89, 115, 122, 136, 140, 142, 151, 164, 167, 170], "": [0, 1, 3, 4, 6, 13, 17, 22, 27, 30, 31, 32, 34, 36, 37, 38, 40, 41, 42, 47, 51, 55, 56, 58, 59, 62, 63, 64, 66, 70, 75, 76, 78, 81, 84, 87, 89, 91, 92, 94, 95, 96, 97, 99, 100, 101, 102, 103, 106, 108, 110, 113, 115, 116, 124, 136, 140, 142, 147, 148, 149, 151, 158, 161, 164, 165, 166, 167], "d": [0, 4, 7, 17, 30, 32, 51, 55, 58, 63, 93, 102, 111, 116, 118, 136, 140], "describ": [0, 3, 4, 5, 6, 7, 13, 14, 16, 18, 19, 21, 28, 30, 32, 33, 34, 36, 38, 39, 41, 42, 47, 49, 50, 51, 52, 55, 56, 58, 59, 61, 63, 64, 66, 67, 70, 71, 75, 77, 78, 81, 82, 83, 94, 96, 97, 103, 109, 113, 115, 116, 118, 125, 128, 129, 135, 140, 142, 143, 147, 148, 149, 151, 158, 159, 162, 164, 166, 167, 170], "further": [0, 6, 16, 19, 27, 34, 36, 44, 52, 63, 66, 71, 96, 110, 115, 116, 135, 136, 149], "below": [0, 3, 6, 13, 15, 16, 18, 19, 20, 24, 26, 30, 31, 32, 34, 36, 42, 47, 48, 49, 55, 56, 58, 59, 62, 63, 68, 71, 75, 84, 86, 88, 90, 98, 102, 108, 111, 112, 115, 116, 118, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 140, 142, 145, 146, 147, 148, 149, 150, 151, 152, 156, 157, 158, 162, 164, 167], "case": [0, 5, 6, 8, 13, 16, 19, 21, 24, 32, 34, 36, 41, 44, 47, 48, 49, 52, 55, 62, 63, 67, 70, 71, 72, 75, 77, 82, 88, 94, 97, 99, 101, 103, 109, 111, 115, 116, 118, 120, 123, 124, 125, 126, 127, 132, 135, 136, 139, 142, 143, 149, 151, 158, 162, 164, 165, 167, 170], "title_with_t": [0, 82], "true": [0, 1, 2, 3, 5, 6, 15, 16, 29, 32, 35, 37, 42, 47, 51, 54, 55, 58, 63, 70, 77, 81, 88, 91, 94, 97, 98, 99, 103, 104, 106, 115, 118, 125, 136, 139, 140, 142, 144, 145, 148, 149, 150, 151, 152, 158, 164], "title_fonts": [0, 136], "float": [0, 3, 32, 34, 37, 47, 51, 63, 91, 94, 97, 102, 106, 109, 148, 149, 151, 152, 158, 164], "fontsiz": [0, 82], "title_kwarg": [0, 136], "ani": [0, 3, 4, 5, 6, 8, 13, 16, 18, 19, 20, 21, 22, 24, 29, 30, 31, 34, 36, 37, 38, 39, 40, 47, 48, 49, 52, 54, 55, 58, 59, 61, 62, 64, 65, 66, 68, 70, 71, 72, 74, 76, 77, 78, 82, 86, 92, 93, 94, 96, 97, 98, 99, 101, 103, 105, 109, 111, 114, 115, 116, 118, 123, 127, 129, 135, 136, 137, 139, 142, 143, 144, 147, 148, 149, 151, 158, 167, 170], "other": [0, 3, 4, 5, 6, 7, 9, 12, 13, 16, 19, 22, 24, 29, 30, 32, 35, 36, 37, 38, 39, 41, 47, 48, 49, 50, 52, 55, 56, 57, 59, 60, 61, 62, 65, 66, 68, 70, 71, 72, 75, 76, 77, 81, 84, 86, 88, 89, 91, 94, 96, 97, 98, 100, 101, 102, 105, 108, 110, 111, 115, 116, 119, 120, 122, 123, 125, 140, 143, 146, 147, 148, 151, 153, 158, 162, 164, 166, 167, 168], "kwarg": [0, 2, 3, 32, 63, 82, 109, 116, 118, 136, 147, 158], "pass": [0, 3, 16, 21, 22, 30, 32, 37, 47, 49, 55, 63, 76, 82, 88, 91, 93, 95, 101, 104, 106, 107, 109, 116, 135, 140, 150, 158, 164, 167], "plt": [0, 63, 141], "e": [0, 1, 3, 5, 8, 12, 13, 14, 16, 22, 24, 29, 30, 31, 32, 34, 36, 37, 44, 47, 49, 50, 51, 54, 55, 57, 58, 59, 60, 61, 62, 63, 64, 66, 67, 68, 70, 71, 74, 75, 76, 77, 78, 81, 84, 85, 89, 94, 96, 97, 99, 100, 101, 102, 103, 104, 107, 109, 110, 111, 115, 116, 118, 123, 124, 125, 126, 127, 135, 136, 137, 140, 142, 143, 144, 146, 147, 148, 149, 150, 151, 152, 158, 162, 164, 165, 166, 167, 170], "g": [0, 1, 3, 4, 5, 8, 12, 13, 14, 16, 17, 22, 24, 29, 30, 31, 32, 34, 36, 37, 44, 47, 49, 50, 54, 55, 58, 59, 60, 61, 62, 63, 64, 66, 68, 70, 71, 74, 75, 76, 77, 78, 81, 84, 85, 96, 99, 100, 101, 102, 103, 104, 110, 111, 115, 116, 118, 123, 124, 125, 126, 127, 135, 136, 137, 140, 142, 143, 146, 147, 148, 149, 150, 151, 152, 162, 164, 165, 167, 170], "color": [0, 2, 3, 32, 42, 55, 63, 70, 71, 81, 136, 142, 147, 164], "format": [0, 1, 3, 5, 13, 14, 27, 32, 35, 38, 39, 42, 47, 48, 50, 52, 53, 55, 57, 63, 64, 66, 70, 71, 73, 75, 81, 82, 88, 91, 97, 98, 100, 101, 103, 109, 113, 124, 125, 127, 130, 132, 135, 136, 148, 151, 158, 159, 164, 166, 168], "like": [0, 12, 13, 18, 26, 30, 31, 42, 44, 55, 58, 59, 63, 64, 71, 84, 89, 91, 94, 97, 98, 99, 102, 103, 104, 106, 110, 111, 116, 124, 140, 142, 147, 161, 162, 165], "time": [0, 1, 5, 6, 7, 10, 14, 16, 18, 19, 22, 24, 27, 29, 30, 32, 34, 36, 37, 38, 39, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 55, 57, 58, 63, 64, 71, 72, 75, 76, 77, 78, 82, 86, 88, 91, 92, 96, 97, 98, 104, 106, 108, 115, 116, 118, 119, 122, 124, 125, 127, 128, 129, 132, 135, 136, 137, 139, 140, 142, 144, 146, 147, 150, 152, 158, 162, 165, 166, 170], "t": [0, 1, 4, 5, 12, 13, 17, 19, 26, 29, 30, 31, 32, 34, 36, 37, 42, 47, 49, 58, 59, 62, 64, 66, 67, 70, 71, 75, 76, 77, 82, 84, 88, 89, 92, 93, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 108, 110, 116, 122, 131, 135, 136, 142, 148, 150, 152, 158, 162, 164, 165, 167, 168, 170], "14": [0, 34, 55, 75, 82, 134, 135, 138, 142], "8e": [0, 82], "And": [0, 6, 19, 22, 58, 61], "rather": [0, 5, 6, 18, 22, 24, 30, 31, 34, 36, 37, 42, 58, 59, 62, 66, 67, 68, 74, 75, 94, 99, 101, 104, 111, 112, 115, 118, 123, 124, 125, 127, 129, 130, 132, 135, 136, 138, 139, 142, 147, 148, 149, 158, 159, 162, 164, 167, 170], "than": [0, 3, 5, 6, 13, 16, 18, 19, 22, 24, 30, 31, 32, 34, 36, 37, 42, 47, 49, 55, 58, 59, 62, 63, 64, 66, 67, 68, 70, 72, 74, 75, 77, 81, 84, 88, 89, 91, 94, 97, 98, 99, 101, 102, 104, 109, 111, 115, 116, 118, 119, 122, 123, 124, 125, 126, 127, 129, 130, 132, 135, 136, 138, 139, 142, 143, 144, 147, 148, 149, 151, 158, 159, 161, 162, 164, 167, 170], "8f": [0, 82], "001": [0, 36, 82, 92], "1000": [0, 57, 71, 82, 162], "A": [0, 2, 3, 4, 5, 6, 7, 11, 17, 18, 21, 22, 24, 31, 32, 37, 38, 39, 45, 48, 49, 51, 55, 58, 59, 63, 64, 65, 66, 68, 71, 75, 84, 86, 88, 89, 93, 94, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 108, 115, 116, 119, 125, 127, 128, 129, 130, 132, 135, 136, 140, 141, 148, 151, 158, 164, 170], "differ": [0, 1, 3, 6, 7, 12, 15, 16, 18, 19, 24, 30, 31, 32, 33, 36, 37, 38, 39, 42, 47, 49, 50, 52, 54, 57, 61, 63, 66, 68, 70, 71, 75, 76, 81, 84, 88, 89, 91, 93, 94, 96, 97, 102, 104, 109, 110, 111, 112, 115, 116, 123, 124, 125, 126, 127, 130, 132, 133, 140, 143, 144, 145, 146, 148, 149, 150, 151, 156, 157, 162, 164, 165, 166, 167, 170], "title_t_format": [0, 136], "contain": [0, 1, 3, 5, 12, 13, 18, 19, 22, 25, 27, 28, 32, 34, 35, 36, 37, 38, 39, 40, 43, 45, 46, 47, 48, 49, 51, 53, 54, 55, 56, 57, 58, 59, 63, 64, 66, 67, 70, 71, 77, 78, 82, 84, 85, 88, 89, 91, 92, 94, 96, 97, 99, 101, 102, 103, 104, 106, 108, 109, 110, 111, 115, 116, 119, 120, 127, 128, 138, 140, 142, 147, 148, 151, 153, 158, 162, 164, 165, 167], "i": [0, 1, 2, 3, 4, 5, 6, 7, 8, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 46, 47, 48, 49, 50, 51, 52, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 70, 71, 72, 73, 74, 75, 76, 77, 81, 82, 83, 84, 85, 86, 88, 89, 90, 91, 92, 94, 95, 96, 97, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 122, 123, 124, 125, 126, 127, 128, 129, 130, 132, 134, 135, 136, 137, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 154, 155, 156, 157, 158, 159, 160, 161, 162, 164, 165, 166, 167, 168, 169, 170], "dai": [0, 6, 13, 55, 136, 151], "hour": [0, 13, 36, 55, 63, 136], "minut": [0, 36, 42, 51, 55, 58, 63, 136, 143, 164, 166], "second": [0, 3, 16, 18, 19, 32, 34, 39, 47, 49, 51, 55, 63, 71, 88, 94, 98, 104, 115, 119, 125, 136, 139, 148, 151, 158, 160, 161, 164, 167, 170], "otherwis": [0, 5, 32, 58, 62, 65, 70, 86, 98, 102, 103, 104, 105, 106, 109, 115, 136, 137, 148, 154, 164], "you": [0, 2, 3, 4, 5, 12, 13, 14, 15, 16, 18, 19, 20, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 34, 35, 36, 37, 38, 39, 40, 41, 43, 44, 45, 47, 51, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 66, 67, 70, 71, 74, 75, 76, 77, 78, 80, 81, 82, 84, 85, 86, 88, 89, 90, 91, 93, 96, 97, 98, 99, 100, 101, 102, 104, 105, 106, 107, 108, 110, 111, 112, 113, 114, 116, 118, 119, 124, 125, 126, 127, 130, 132, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 149, 150, 151, 152, 153, 155, 156, 157, 158, 160, 162, 165, 166, 167, 169], "could": [0, 5, 12, 13, 29, 34, 37, 38, 39, 42, 47, 57, 58, 64, 70, 72, 75, 76, 77, 82, 84, 88, 94, 98, 106, 107, 111, 123, 132, 142, 144, 149, 150, 151, 152, 164, 167], "plotax": [0, 3, 47, 82, 130, 147], "surfac": [0, 17, 24, 27, 32, 34, 36, 37, 42, 47, 48, 50, 52, 55, 72, 75, 81, 83, 89, 96, 108, 112, 115, 123, 142, 143, 151, 162], "elev": [0, 24, 27, 34, 42, 48, 50, 52, 55, 57, 63, 72, 81, 112, 115, 130, 142, 143, 151, 162, 164, 166], "after": [0, 1, 3, 5, 6, 12, 13, 21, 25, 29, 30, 31, 34, 35, 36, 38, 39, 42, 47, 49, 52, 58, 59, 61, 63, 64, 66, 67, 70, 71, 77, 82, 89, 90, 91, 93, 98, 104, 106, 111, 115, 116, 118, 119, 123, 124, 136, 141, 144, 148, 149, 150, 152, 158, 167], "earthquak": [0, 19, 27, 32, 48, 49, 52, 114, 144, 151, 159, 162], "none": [0, 1, 2, 3, 16, 26, 29, 32, 35, 37, 42, 47, 51, 55, 63, 70, 77, 91, 94, 97, 98, 103, 104, 106, 109, 116, 118, 119, 125, 127, 128, 129, 130, 131, 134, 135, 136, 139, 148, 150, 152, 158, 164], "instead": [0, 2, 3, 13, 19, 34, 38, 39, 42, 44, 47, 49, 56, 58, 59, 62, 66, 67, 105, 106, 109, 111, 124, 125, 128, 132, 135, 139, 140, 141, 142, 151, 162, 164], "convent": [0, 3, 24, 32, 50, 57, 75, 102, 162], "mention": [0, 19, 96, 148, 149], "abov": [0, 3, 5, 13, 14, 16, 19, 22, 30, 34, 36, 38, 39, 41, 42, 43, 44, 47, 49, 52, 55, 57, 58, 59, 62, 65, 67, 70, 72, 75, 77, 82, 85, 86, 89, 98, 100, 105, 108, 109, 115, 118, 125, 127, 132, 135, 140, 142, 144, 146, 147, 148, 150, 151, 152, 158, 161, 162, 164, 167], "intern": [0, 6, 32, 47, 57, 63, 75, 125, 149, 162, 164, 170], "t_str": 0, "title_str": 0, "xlimit": [0, 47, 55, 130], "arrai": [0, 3, 6, 15, 19, 22, 24, 29, 32, 34, 35, 37, 41, 47, 48, 51, 53, 57, 63, 82, 88, 89, 91, 92, 94, 96, 97, 98, 101, 102, 103, 104, 106, 108, 109, 110, 119, 120, 121, 125, 127, 130, 132, 136, 140, 141, 142, 145, 148, 149, 150, 151, 152, 158, 162, 164, 167], "xmin": [0, 37], "xmax": [0, 37], "auto": [0, 47, 89], "x": [0, 2, 3, 5, 8, 13, 16, 19, 22, 25, 27, 29, 30, 31, 32, 34, 35, 36, 37, 41, 42, 45, 47, 48, 49, 50, 51, 55, 56, 57, 58, 59, 63, 70, 71, 72, 75, 77, 81, 82, 85, 88, 91, 92, 94, 95, 96, 98, 99, 101, 102, 103, 106, 107, 108, 110, 115, 116, 118, 130, 136, 140, 141, 142, 144, 148, 149, 150, 151, 162, 164, 167, 170], "limit": [0, 4, 6, 12, 27, 32, 35, 41, 52, 55, 63, 65, 71, 76, 81, 86, 88, 89, 94, 96, 104, 115, 121, 142, 148, 149, 150, 152, 162, 164, 170], "an": [0, 1, 2, 3, 4, 5, 6, 9, 11, 12, 16, 17, 18, 19, 22, 24, 26, 27, 29, 30, 31, 32, 34, 35, 36, 37, 41, 42, 43, 44, 47, 48, 49, 51, 52, 54, 59, 60, 61, 62, 63, 67, 68, 71, 72, 75, 76, 77, 81, 82, 84, 86, 88, 89, 90, 91, 94, 95, 96, 97, 98, 100, 101, 102, 103, 104, 105, 107, 108, 109, 111, 113, 116, 117, 119, 121, 123, 124, 125, 127, 128, 129, 130, 132, 133, 135, 136, 137, 139, 140, 141, 142, 144, 147, 148, 149, 151, 153, 156, 157, 158, 159, 162, 164, 165, 166, 167], "two": [0, 3, 4, 7, 8, 15, 17, 18, 24, 27, 30, 32, 34, 36, 37, 47, 48, 49, 51, 55, 56, 58, 63, 71, 72, 77, 82, 88, 94, 97, 98, 101, 104, 107, 109, 113, 114, 115, 116, 118, 119, 123, 124, 127, 129, 139, 140, 142, 145, 146, 150, 162, 164, 167, 170], "element": [0, 3, 24, 37, 63, 102, 104, 106, 148, 149, 150, 151], "choos": [0, 7, 60, 62, 63, 75, 101, 118, 148, 151], "automat": [0, 2, 3, 8, 11, 16, 32, 38, 39, 44, 55, 59, 66, 81, 82, 84, 88, 93, 97, 99, 105, 106, 107, 109, 116, 119, 130, 132, 148, 149, 151, 162], "ylimit": [0, 47, 55, 130, 147], "ymin": [0, 37], "ymax": [0, 37], "y": [0, 2, 3, 4, 8, 16, 17, 19, 29, 32, 34, 35, 36, 37, 41, 42, 47, 49, 50, 51, 55, 57, 59, 63, 70, 71, 75, 77, 88, 94, 98, 99, 101, 115, 118, 126, 136, 140, 141, 142, 144, 148, 149, 150, 151, 162, 164], "xticks_fonts": [0, 136], "xtick": [0, 42, 53], "mark": [0, 16, 55, 70, 115, 116], "label": [0, 32, 36, 53, 55, 57, 63, 118, 123, 135, 136, 142, 162, 164], "xticks_kwarg": [0, 136], "dictionari": [0, 1, 2, 3, 32, 37, 47, 64, 82, 88, 91, 97, 102, 103, 106, 108, 111, 158, 162, 164], "locat": [0, 5, 6, 7, 13, 19, 32, 34, 36, 49, 50, 51, 55, 57, 62, 64, 71, 72, 77, 94, 98, 100, 102, 103, 109, 111, 113, 115, 124, 126, 143, 144, 151, 158, 159, 164], "xlabel": [0, 136], "xlabel_fonts": [0, 136], "xlabel_kwarg": [0, 136], "yticks_fonts": [0, 136], "ytick": 0, "yticks_kwarg": [0, 136], "ylabel": [0, 136], "ylabel_fonts": [0, 136], "ylabel_kwarg": [0, 136], "aspect": [0, 12, 26, 31, 46, 52, 53, 71, 136, 164], "ratio": [0, 3, 6, 15, 24, 49, 53, 71, 75, 92, 102, 104, 145, 148, 149, 150], "gca": [0, 42, 53, 70], "set_aspect": [0, 42, 53, 70], "aspect_latitud": [0, 136], "longitud": [0, 32, 34, 37, 50, 51, 57, 63, 70, 75, 81, 123, 142, 151, 158, 164], "latitud": [0, 15, 32, 34, 37, 49, 50, 51, 57, 75, 81, 123, 142, 145, 151, 154, 158, 164], "coordin": [0, 4, 25, 32, 34, 36, 48, 51, 63, 77, 81, 88, 94, 98, 99, 108, 115, 142, 151, 164], "chose": [0, 68, 137], "so": [0, 5, 6, 8, 9, 13, 16, 18, 19, 21, 24, 29, 30, 31, 32, 35, 36, 37, 38, 39, 41, 42, 43, 44, 45, 47, 49, 52, 53, 55, 56, 57, 58, 59, 60, 63, 64, 66, 67, 70, 71, 72, 75, 76, 77, 78, 81, 82, 85, 88, 89, 90, 97, 98, 101, 106, 108, 109, 113, 115, 116, 118, 119, 120, 124, 125, 126, 127, 128, 129, 130, 132, 135, 136, 140, 142, 143, 144, 147, 148, 149, 150, 151, 154, 158, 161, 162, 164, 166, 167, 168], "distanc": [0, 32, 36, 49, 51, 55, 75, 151, 162, 164], "meter": [0, 18, 19, 32, 49, 51, 55, 70, 72, 75, 115, 143, 151, 158, 164, 166], "same": [0, 3, 5, 6, 8, 13, 16, 18, 19, 24, 27, 30, 33, 34, 35, 36, 37, 42, 44, 47, 49, 50, 51, 52, 55, 57, 58, 59, 62, 63, 64, 66, 68, 70, 75, 77, 78, 81, 82, 83, 84, 88, 92, 94, 96, 97, 98, 101, 102, 104, 109, 110, 118, 119, 120, 124, 125, 130, 132, 136, 139, 140, 142, 148, 149, 150, 151, 156, 162, 164, 167], "cover": [0, 6, 7, 29, 30, 32, 34, 36, 37, 41, 42, 55, 63, 70, 75, 115, 120, 125, 144, 150, 162], "broad": [0, 164], "rang": [0, 3, 5, 13, 32, 47, 51, 55, 115, 119, 124, 141, 142], "middl": [0, 102, 124], "most": [0, 3, 19, 22, 24, 29, 31, 34, 36, 38, 39, 43, 44, 47, 49, 52, 54, 55, 56, 57, 58, 61, 63, 66, 70, 71, 76, 77, 78, 81, 82, 84, 86, 94, 98, 99, 104, 107, 108, 110, 115, 116, 118, 124, 126, 132, 135, 137, 138, 139, 140, 141, 142, 143, 147, 148, 149, 151, 154, 155, 167], "interest": [0, 5, 12, 16, 17, 19, 20, 25, 29, 31, 34, 36, 37, 42, 53, 71, 72, 89, 106, 113, 115, 116, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 144, 148, 158], "gener": [0, 1, 2, 3, 4, 5, 6, 7, 9, 11, 13, 14, 16, 17, 18, 19, 21, 22, 26, 27, 30, 31, 34, 36, 41, 42, 43, 44, 47, 48, 49, 52, 55, 57, 59, 61, 64, 66, 67, 68, 72, 75, 76, 77, 81, 82, 83, 84, 86, 89, 90, 92, 94, 99, 100, 101, 103, 104, 105, 108, 109, 111, 113, 115, 119, 123, 125, 136, 139, 142, 143, 146, 148, 149, 153, 159, 161, 162, 167, 168], "appropri": [0, 4, 5, 6, 13, 16, 19, 26, 30, 48, 52, 53, 55, 59, 61, 63, 64, 68, 71, 74, 76, 88, 91, 92, 93, 97, 99, 100, 101, 102, 103, 116, 129, 140, 143, 148, 158, 167, 170], "valu": [0, 3, 5, 6, 7, 16, 18, 19, 22, 24, 29, 32, 35, 36, 37, 38, 39, 41, 42, 44, 47, 48, 49, 51, 53, 54, 55, 57, 63, 64, 66, 68, 70, 71, 72, 75, 76, 77, 82, 89, 94, 96, 97, 98, 101, 102, 103, 104, 106, 108, 109, 115, 116, 119, 120, 122, 123, 125, 127, 129, 130, 132, 135, 139, 140, 142, 143, 144, 148, 149, 150, 151, 152, 154, 158, 159, 162, 164, 165, 167, 170], "np": [0, 32, 41, 88, 94, 98, 101, 141, 150], "co": [0, 26, 32, 37, 42, 51, 53, 59, 70, 88, 101, 144], "pi": [0, 42, 51, 53, 70, 88, 101], "180": [0, 32, 42, 53, 63, 70, 75], "useoffset": [0, 42, 53, 136], "boolean": [0, 3, 55, 70, 97, 102, 148, 149, 151], "tick": [0, 55, 136], "mai": [0, 1, 2, 3, 4, 5, 6, 12, 13, 17, 19, 20, 21, 22, 24, 25, 26, 27, 29, 30, 31, 32, 34, 36, 37, 38, 39, 40, 42, 43, 44, 49, 50, 51, 52, 53, 55, 57, 58, 61, 62, 65, 66, 68, 70, 71, 72, 75, 76, 81, 82, 84, 85, 86, 89, 90, 93, 94, 96, 97, 98, 101, 103, 104, 107, 109, 111, 115, 116, 118, 121, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 142, 143, 144, 146, 147, 148, 149, 150, 151, 158, 159, 160, 162, 164, 165, 167], "offset": [0, 53, 55, 63, 158, 164], "from": [0, 1, 3, 4, 5, 6, 7, 12, 14, 15, 16, 17, 18, 19, 20, 25, 28, 29, 31, 34, 36, 38, 39, 41, 46, 47, 48, 49, 52, 55, 56, 57, 59, 60, 61, 62, 64, 65, 66, 67, 71, 72, 74, 75, 77, 81, 82, 86, 87, 88, 90, 91, 94, 95, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 108, 109, 111, 112, 113, 115, 116, 118, 119, 120, 123, 124, 125, 127, 130, 131, 132, 135, 136, 137, 138, 139, 140, 141, 143, 144, 145, 148, 149, 150, 151, 152, 154, 156, 157, 158, 159, 160, 162, 165, 166, 167, 168], "some": [0, 3, 4, 5, 6, 7, 8, 10, 12, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 27, 29, 30, 32, 34, 36, 37, 38, 39, 42, 44, 47, 48, 49, 50, 52, 53, 55, 56, 57, 58, 59, 62, 67, 70, 75, 76, 77, 81, 83, 84, 86, 89, 90, 92, 96, 97, 98, 100, 101, 103, 105, 106, 107, 108, 110, 111, 113, 114, 115, 116, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 140, 142, 143, 144, 147, 148, 149, 150, 152, 153, 154, 158, 159, 161, 162, 164, 167], "common": [0, 3, 18, 19, 25, 30, 38, 39, 43, 44, 66, 67, 78, 81, 88, 102, 104, 106, 107, 118, 125, 127, 130, 136, 165, 167], "print": [0, 1, 3, 7, 31, 37, 42, 55, 57, 63, 64, 70, 71, 82, 94, 98, 99, 100, 106, 108, 110, 111, 119, 120, 123, 125, 126, 127, 134, 142, 148, 150, 152, 158, 165], "corner": [0, 3, 32, 34, 57, 75, 77, 94, 142, 148, 150, 152, 162, 164], "often": [0, 6, 11, 13, 16, 19, 22, 29, 31, 34, 37, 38, 39, 43, 44, 47, 48, 52, 53, 54, 63, 64, 68, 72, 75, 77, 98, 110, 111, 115, 116, 132, 136, 139, 140, 142, 143, 144, 147, 148, 151, 158, 162, 166, 167, 170], "nicer": [0, 84, 136], "full": [0, 5, 6, 14, 19, 37, 59, 61, 62, 63, 77, 82, 91, 98, 104, 108, 135, 146, 148, 162, 167], "each": [0, 1, 2, 3, 5, 6, 7, 12, 16, 18, 19, 20, 24, 32, 34, 36, 37, 45, 47, 49, 51, 55, 57, 58, 59, 63, 64, 67, 70, 71, 72, 75, 76, 77, 80, 81, 82, 84, 88, 89, 92, 94, 97, 98, 99, 101, 102, 103, 104, 106, 108, 115, 116, 118, 119, 120, 124, 125, 127, 128, 130, 135, 136, 137, 139, 140, 141, 142, 144, 147, 148, 149, 150, 151, 152, 158, 161, 162, 164, 166, 170], "which": [0, 1, 3, 4, 5, 6, 7, 11, 12, 13, 14, 16, 18, 19, 22, 24, 27, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 45, 46, 47, 49, 50, 52, 55, 57, 58, 59, 60, 61, 62, 63, 64, 66, 68, 70, 71, 72, 75, 76, 77, 82, 84, 85, 88, 89, 91, 92, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 107, 108, 109, 110, 113, 115, 116, 118, 119, 120, 123, 125, 127, 128, 130, 132, 135, 136, 137, 139, 140, 141, 142, 143, 144, 148, 149, 150, 151, 154, 158, 159, 162, 164, 166, 167, 169, 170], "should": [0, 1, 2, 3, 4, 5, 6, 12, 13, 14, 16, 19, 20, 21, 22, 24, 25, 27, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 47, 49, 52, 55, 57, 58, 59, 60, 61, 62, 63, 66, 68, 70, 71, 74, 75, 76, 77, 81, 82, 84, 89, 94, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 108, 109, 111, 112, 115, 116, 118, 119, 120, 123, 125, 126, 127, 130, 135, 136, 137, 139, 140, 141, 143, 144, 146, 147, 148, 149, 150, 151, 152, 153, 158, 160, 162, 164, 165, 167, 169, 170], "ticklabel_format": [0, 42, 53], "issu": [0, 19, 24, 26, 28, 58, 59, 62, 71, 88, 93, 94, 96, 104, 105, 107, 116, 118, 119, 124, 125, 126, 127, 140, 151, 165], "grid": [0, 4, 7, 17, 18, 19, 21, 22, 24, 25, 27, 29, 30, 41, 42, 47, 48, 50, 52, 55, 56, 63, 70, 71, 72, 77, 78, 81, 86, 88, 96, 97, 98, 99, 101, 102, 103, 104, 106, 108, 115, 116, 118, 119, 120, 122, 123, 125, 126, 127, 130, 132, 134, 135, 136, 137, 140, 141, 142, 143, 144, 148, 149, 150, 152, 159, 161, 162, 164, 166, 167, 170], "grid_kwarg": [0, 136], "add": [0, 11, 12, 13, 16, 17, 18, 19, 29, 30, 32, 47, 51, 55, 58, 59, 61, 62, 67, 70, 71, 75, 81, 88, 93, 94, 98, 99, 101, 109, 118, 120, 123, 125, 126, 127, 130, 136, 141, 152, 154, 158, 162, 164, 168], "line": [0, 1, 3, 4, 16, 19, 30, 31, 32, 34, 35, 42, 44, 47, 48, 49, 50, 51, 54, 55, 57, 58, 63, 64, 66, 67, 71, 77, 81, 82, 96, 97, 99, 104, 108, 109, 110, 111, 118, 119, 120, 123, 125, 132, 136, 137, 142, 147, 148, 150, 158, 162, 164], "linewidth": [0, 82, 142], "afterax": [0, 29, 47, 55, 82, 136], "function": [0, 1, 2, 3, 5, 7, 15, 17, 18, 19, 24, 25, 27, 29, 30, 32, 34, 37, 42, 47, 48, 49, 54, 55, 57, 66, 67, 68, 72, 75, 81, 82, 83, 88, 89, 91, 92, 93, 94, 95, 97, 100, 101, 102, 103, 106, 109, 110, 115, 116, 118, 119, 120, 123, 124, 125, 126, 127, 132, 135, 136, 140, 142, 144, 145, 147, 148, 149, 150, 151, 152, 158, 162, 163, 164, 165, 167], "execut": [0, 1, 3, 14, 16, 19, 21, 29, 31, 34, 38, 39, 47, 63, 71, 82, 84, 91, 93, 99, 111, 116, 118, 140, 146, 165], "exec": [0, 1, 3, 82], "defin": [0, 1, 3, 5, 6, 7, 24, 29, 32, 34, 36, 37, 41, 42, 44, 55, 63, 64, 66, 70, 71, 75, 82, 84, 88, 91, 94, 100, 101, 103, 104, 106, 108, 109, 115, 119, 127, 132, 136, 140, 150, 152, 158, 162, 164, 165, 167, 170], "have": [0, 1, 2, 3, 4, 5, 6, 8, 9, 11, 12, 13, 14, 16, 18, 19, 20, 22, 24, 25, 26, 27, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 42, 44, 45, 47, 48, 49, 51, 52, 55, 56, 58, 59, 60, 62, 66, 67, 68, 70, 71, 72, 75, 76, 77, 81, 82, 84, 85, 86, 88, 89, 92, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 111, 113, 115, 116, 118, 119, 120, 122, 123, 124, 125, 126, 127, 129, 130, 132, 133, 135, 136, 137, 139, 140, 141, 142, 143, 148, 149, 151, 153, 154, 158, 162, 164, 165, 167], "argument": [0, 1, 2, 3, 29, 32, 37, 48, 51, 54, 55, 57, 82, 88, 89, 93, 94, 97, 101, 103, 104, 106, 109, 116, 127, 136, 140, 142, 147, 148, 149, 158, 164, 167], "current_data": [0, 3, 27, 47, 81, 82], "version": [0, 1, 4, 5, 6, 7, 8, 9, 11, 13, 15, 16, 18, 19, 22, 24, 25, 30, 32, 34, 36, 41, 42, 44, 45, 47, 48, 49, 50, 52, 55, 57, 60, 61, 63, 64, 67, 68, 70, 71, 75, 76, 78, 81, 82, 84, 85, 89, 92, 96, 97, 99, 102, 104, 105, 107, 110, 112, 115, 116, 118, 119, 120, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 138, 140, 141, 142, 144, 145, 146, 148, 149, 150, 151, 152, 156, 157, 158, 162, 164, 167, 170], "liner": [0, 32], "pylab": [0, 42, 82], "my": [0, 22, 24, 57, 77, 89, 99, 150, 162], "custom": [0, 13, 16, 22, 24, 27, 67, 71, 78, 81, 89, 95, 101, 144], "sinc": [0, 3, 4, 5, 6, 16, 19, 22, 24, 30, 34, 36, 42, 44, 45, 51, 52, 55, 57, 58, 59, 62, 63, 66, 67, 72, 75, 76, 77, 81, 82, 88, 89, 90, 97, 98, 115, 116, 118, 119, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 142, 143, 148, 149, 151, 162, 165, 166], "ha": [0, 4, 5, 6, 8, 12, 13, 14, 16, 18, 19, 20, 22, 23, 24, 25, 26, 29, 30, 31, 34, 36, 37, 38, 39, 42, 45, 47, 49, 54, 55, 56, 57, 58, 59, 63, 64, 66, 68, 70, 71, 72, 75, 77, 78, 82, 86, 89, 91, 94, 98, 101, 102, 103, 106, 107, 109, 111, 112, 113, 115, 116, 117, 118, 119, 120, 125, 126, 127, 128, 129, 130, 132, 135, 136, 137, 138, 140, 142, 143, 148, 149, 151, 154, 158, 161, 162, 164, 167, 168, 170], "been": [0, 1, 4, 5, 8, 9, 13, 14, 16, 18, 19, 20, 22, 23, 24, 26, 27, 29, 30, 31, 34, 35, 36, 37, 38, 39, 42, 45, 47, 48, 49, 52, 55, 56, 57, 58, 59, 64, 66, 68, 70, 71, 75, 78, 82, 84, 86, 89, 91, 97, 98, 102, 103, 106, 107, 108, 109, 111, 113, 115, 117, 118, 119, 120, 122, 125, 126, 127, 128, 129, 130, 132, 133, 135, 136, 137, 139, 140, 142, 148, 149, 151, 154, 162, 164, 167], "import": [0, 3, 5, 18, 19, 24, 30, 34, 36, 40, 41, 42, 47, 51, 52, 55, 57, 60, 62, 63, 67, 68, 70, 75, 78, 82, 84, 88, 89, 91, 93, 94, 96, 97, 98, 99, 100, 101, 103, 104, 105, 106, 108, 116, 118, 125, 130, 140, 141, 142, 143, 144, 148, 149, 150, 151, 152, 154, 162, 164, 166, 168], "modul": [0, 7, 8, 12, 18, 19, 27, 30, 31, 34, 36, 42, 44, 48, 49, 53, 55, 56, 57, 62, 64, 67, 70, 75, 76, 81, 82, 83, 84, 88, 89, 92, 93, 97, 101, 102, 103, 106, 110, 111, 116, 118, 120, 121, 123, 126, 127, 128, 129, 130, 137, 139, 142, 148, 149, 151, 158, 162, 163], "form": [0, 2, 3, 4, 5, 6, 8, 12, 19, 21, 22, 24, 26, 30, 31, 32, 34, 36, 38, 39, 41, 45, 46, 47, 49, 51, 55, 59, 64, 65, 68, 75, 77, 86, 89, 98, 102, 104, 108, 109, 115, 120, 127, 128, 129, 130, 139, 140, 142, 148, 149, 150, 151, 156, 162, 164, 167, 170], "better": [0, 6, 18, 19, 24, 34, 42, 47, 49, 70, 71, 72, 76, 77, 81, 104, 113, 115, 118, 124, 125, 126, 129, 130, 132, 133], "want": [0, 2, 3, 10, 12, 13, 14, 19, 21, 22, 26, 30, 31, 34, 35, 36, 37, 38, 39, 40, 42, 43, 44, 47, 51, 54, 55, 58, 59, 61, 62, 63, 66, 67, 68, 70, 76, 77, 82, 84, 88, 89, 90, 91, 97, 98, 99, 111, 114, 116, 124, 127, 130, 136, 138, 140, 141, 142, 146, 147, 150, 155, 158, 162, 164, 165], "do": [0, 1, 4, 6, 8, 11, 12, 13, 15, 18, 19, 21, 22, 27, 30, 31, 34, 35, 36, 38, 39, 40, 42, 43, 44, 47, 52, 54, 55, 56, 58, 61, 62, 66, 67, 70, 75, 76, 77, 82, 84, 88, 89, 93, 94, 96, 97, 98, 99, 100, 101, 105, 107, 108, 109, 111, 114, 115, 116, 118, 119, 123, 124, 125, 126, 127, 129, 130, 132, 135, 136, 144, 145, 147, 148, 149, 150, 151, 156, 157, 158, 160, 162, 165, 167, 168], "sever": [0, 1, 2, 5, 10, 12, 16, 19, 22, 24, 25, 26, 31, 32, 36, 37, 38, 39, 43, 47, 50, 52, 55, 59, 62, 64, 71, 72, 75, 81, 105, 115, 116, 117, 119, 120, 123, 124, 125, 126, 128, 129, 130, 132, 142, 147, 151, 160, 162, 164, 167], "thing": [0, 13, 16, 19, 24, 30, 31, 42, 52, 58, 63, 84, 93, 115, 116, 118, 126, 131, 139], "need": [0, 4, 5, 6, 12, 13, 15, 16, 18, 19, 20, 21, 22, 24, 29, 30, 31, 34, 35, 36, 37, 38, 39, 40, 42, 43, 44, 47, 49, 52, 53, 57, 58, 59, 60, 62, 63, 64, 66, 67, 70, 71, 75, 76, 77, 78, 84, 85, 88, 89, 91, 96, 97, 98, 99, 101, 104, 108, 110, 111, 113, 115, 116, 118, 120, 124, 125, 127, 128, 132, 134, 135, 136, 137, 139, 140, 142, 144, 145, 146, 148, 149, 150, 151, 152, 156, 157, 158, 159, 160, 162, 164, 166, 167, 170], "access": [0, 17, 29, 31, 59, 62, 93, 94, 96, 104, 106, 109], "data": [0, 1, 3, 5, 18, 19, 27, 29, 32, 34, 35, 36, 37, 38, 39, 41, 42, 43, 45, 47, 48, 50, 51, 57, 58, 63, 64, 65, 66, 70, 71, 73, 81, 82, 83, 84, 86, 88, 91, 94, 97, 98, 100, 102, 103, 104, 106, 109, 112, 113, 114, 115, 118, 119, 121, 122, 124, 125, 127, 128, 129, 130, 132, 136, 137, 139, 140, 142, 143, 149, 150, 152, 158, 161, 163, 168], "store": [0, 1, 13, 19, 35, 37, 43, 55, 57, 58, 71, 77, 97, 98, 101, 106, 107, 108, 116, 119, 125, 147, 149, 151, 158, 161, 162, 164], "def": [0, 1, 3, 47, 55, 70, 82, 88, 94, 98, 101, 104, 150, 152, 158], "1d": [0, 4, 7, 15, 19, 21, 24, 27, 31, 32, 37, 48, 49, 63, 67, 71, 72, 81, 82, 88, 96, 99, 100, 102, 104, 110, 112, 118, 123, 126, 128, 129, 137, 140, 141, 145, 149, 157, 164, 167], "alreadi": [0, 1, 6, 12, 13, 19, 20, 30, 31, 44, 59, 60, 62, 63, 64, 70, 84, 85, 99, 103, 105, 108, 110, 118, 120, 128, 135, 136, 137, 146, 164], "xlower": [0, 3, 16, 24, 29, 42, 49, 89, 127, 150, 152, 162, 164, 167], "xupper": [0, 24, 49, 150, 152, 164], "k": [0, 3, 4, 6, 17, 71, 92, 97, 102, 108, 142], "get": [0, 10, 13, 19, 26, 30, 43, 48, 55, 57, 58, 60, 61, 62, 66, 67, 70, 81, 85, 88, 89, 94, 97, 98, 99, 105, 107, 108, 109, 110, 113, 114, 116, 126, 140, 142, 149, 158, 164, 165], "variabl": [0, 3, 5, 13, 14, 18, 19, 24, 27, 29, 30, 32, 34, 37, 38, 39, 40, 43, 47, 48, 49, 54, 55, 58, 61, 62, 71, 74, 76, 77, 78, 82, 88, 89, 97, 99, 103, 104, 106, 107, 109, 111, 118, 123, 124, 125, 127, 129, 135, 136, 139, 140, 148, 149, 150, 152, 158, 162, 164, 165, 167], "just": [0, 6, 30, 34, 43, 58, 59, 88, 89, 91, 93, 97, 98, 99, 100, 101, 106, 109, 120, 127, 148, 167], "avail": [0, 4, 5, 10, 12, 16, 24, 25, 31, 34, 36, 42, 46, 47, 50, 52, 55, 62, 66, 70, 71, 72, 78, 81, 83, 84, 88, 91, 96, 97, 98, 100, 102, 104, 107, 108, 109, 110, 111, 115, 126, 137, 140, 141, 143, 148, 150, 153, 158, 159, 162], "var": [0, 3, 13, 29, 37, 158], "min": [0, 102, 164, 170], "max": [0, 32, 34, 42, 71, 102, 115, 120, 144, 150, 152, 164, 170], "primarili": [0, 19, 56, 77, 127, 128], "where": [0, 1, 3, 5, 6, 12, 13, 16, 18, 19, 24, 29, 32, 34, 36, 37, 38, 39, 41, 42, 43, 47, 48, 49, 52, 55, 57, 62, 63, 64, 66, 68, 70, 71, 72, 77, 78, 84, 91, 94, 95, 96, 97, 99, 102, 111, 115, 118, 119, 120, 123, 124, 125, 130, 132, 139, 141, 142, 143, 144, 147, 148, 149, 150, 151, 152, 158, 161, 162, 164, 167, 170], "horizont": [0, 55, 164], "implement": [0, 1, 4, 5, 7, 14, 16, 18, 19, 32, 42, 49, 63, 64, 67, 74, 86, 101, 102, 104, 108, 109, 116, 122, 125, 128, 130, 132, 140, 141, 148, 164, 167, 170], "claw": [0, 5, 6, 8, 11, 12, 13, 14, 15, 16, 18, 19, 21, 22, 24, 26, 30, 32, 34, 35, 36, 37, 38, 39, 40, 41, 43, 44, 46, 47, 48, 49, 51, 53, 54, 56, 58, 59, 61, 62, 63, 66, 67, 71, 74, 75, 76, 83, 88, 91, 93, 96, 97, 98, 99, 105, 107, 111, 112, 113, 114, 115, 116, 118, 119, 120, 122, 123, 126, 127, 129, 135, 136, 140, 144, 145, 150, 151, 152, 154, 155, 156, 157, 160, 161, 162, 164, 165, 167, 168], "visclaw": [0, 1, 7, 13, 24, 25, 26, 30, 36, 42, 47, 48, 50, 53, 55, 59, 60, 61, 62, 66, 70, 71, 78, 82, 83, 84, 85, 96, 100, 105, 111, 146, 147, 153], "src": [0, 5, 6, 11, 14, 15, 16, 18, 19, 21, 22, 30, 32, 34, 35, 36, 37, 42, 43, 44, 49, 51, 54, 56, 59, 62, 63, 66, 67, 71, 75, 76, 83, 100, 101, 109, 111, 112, 115, 116, 118, 120, 123, 124, 126, 127, 128, 129, 130, 132, 136, 137, 140, 144, 145, 148, 150, 152, 154, 156, 164, 165, 170], "python": [0, 3, 4, 7, 8, 11, 13, 14, 17, 21, 24, 25, 27, 29, 30, 31, 32, 35, 36, 37, 38, 39, 40, 43, 45, 47, 48, 50, 51, 54, 55, 57, 58, 59, 60, 61, 62, 63, 75, 77, 78, 81, 82, 83, 86, 87, 89, 93, 94, 96, 97, 99, 100, 101, 102, 104, 107, 108, 109, 116, 118, 120, 121, 123, 125, 126, 127, 128, 129, 132, 136, 137, 140, 141, 146, 151, 162, 164, 165, 168], "gaugetool": [0, 47, 123], "time_scal": 0, "scale": [0, 4, 32, 53, 55, 71, 78, 96, 97, 118, 119, 125, 127, 132, 151], "3600": [0, 34, 36, 77], "time_label": 0, "time_label_fonts": 0, "time_label_kwarg": [0, 136], "new_plotitem": [0, 3, 47, 55, 82, 147], "plot_typ": [0, 24, 47, 55, 82, 84, 147], "return": [0, 1, 2, 3, 32, 35, 37, 40, 51, 55, 63, 67, 70, 71, 82, 84, 91, 92, 94, 97, 98, 101, 102, 103, 104, 106, 109, 116, 126, 140, 142, 148, 150, 152, 158, 160, 164, 167, 170], "clawplotitem": [0, 1, 7, 24, 29, 81, 83, 118, 124, 127, 136, 147], "associ": [0, 1, 2, 6, 24, 55, 62, 76, 94, 97, 98, 116], "kei": [0, 1, 2, 13, 30, 32, 47, 97, 104, 108, 109, 158, 164], "provid": [0, 2, 4, 7, 10, 16, 19, 22, 29, 30, 32, 34, 36, 37, 41, 44, 48, 49, 50, 51, 52, 55, 57, 58, 63, 65, 67, 72, 75, 77, 81, 86, 89, 91, 92, 97, 98, 99, 101, 103, 104, 108, 109, 110, 113, 114, 116, 118, 124, 132, 136, 138, 140, 148, 157, 158, 161, 162, 164, 167], "one": [0, 1, 2, 3, 4, 5, 6, 8, 13, 15, 16, 18, 19, 22, 24, 26, 27, 29, 30, 31, 32, 34, 36, 37, 38, 39, 42, 47, 49, 50, 55, 57, 58, 59, 60, 61, 62, 63, 64, 68, 70, 71, 72, 74, 75, 77, 78, 81, 82, 88, 94, 97, 98, 99, 101, 103, 104, 105, 108, 109, 111, 113, 115, 116, 118, 124, 125, 127, 132, 135, 139, 140, 141, 142, 144, 145, 147, 148, 149, 150, 151, 152, 153, 156, 157, 158, 162, 164, 167, 168], "item1": [0, 84], "etc": [0, 2, 16, 21, 22, 26, 29, 30, 34, 35, 36, 52, 55, 58, 61, 63, 67, 77, 81, 89, 140, 147, 148, 151, 158, 167], "gethandl": [0, 2, 3], "handl": [0, 2, 3, 6, 34, 42, 44, 48, 57, 63, 76, 78, 81, 94, 97, 101, 103, 104, 106, 107, 108, 109, 111, 118, 119, 120, 122, 123, 125, 127, 128, 129, 130, 141, 144, 158, 164], "plot": [1, 2, 4, 7, 8, 12, 29, 31, 32, 38, 39, 40, 42, 43, 44, 45, 48, 49, 57, 59, 60, 63, 70, 77, 87, 88, 90, 91, 94, 95, 96, 98, 103, 105, 107, 108, 110, 111, 113, 118, 122, 123, 124, 125, 126, 127, 129, 130, 131, 135, 136, 142, 148, 160, 164], "outdir": [1, 3, 35, 36, 37, 38, 39, 47, 54, 66, 81, 84, 91, 93, 94, 98, 124, 150, 152, 165], "path": [1, 5, 13, 14, 32, 34, 37, 41, 42, 44, 47, 49, 51, 55, 58, 61, 62, 64, 66, 70, 74, 81, 82, 91, 96, 97, 99, 103, 109, 126, 127, 130, 136, 146, 151, 158, 164, 165], "directori": [1, 3, 5, 6, 11, 12, 13, 14, 15, 16, 19, 21, 22, 24, 25, 27, 30, 31, 33, 34, 36, 37, 38, 39, 40, 43, 45, 46, 47, 48, 51, 54, 55, 58, 59, 61, 63, 67, 71, 76, 80, 81, 84, 91, 93, 94, 96, 97, 98, 101, 108, 111, 112, 113, 115, 116, 118, 119, 124, 125, 126, 127, 129, 139, 140, 144, 145, 146, 147, 148, 149, 153, 156, 157, 160, 161, 162, 165, 167, 168], "clawpack": [1, 2, 4, 5, 6, 7, 11, 16, 18, 19, 28, 30, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 44, 45, 47, 48, 49, 50, 51, 52, 54, 55, 62, 63, 64, 65, 67, 70, 71, 73, 74, 75, 76, 77, 80, 81, 82, 83, 84, 85, 86, 87, 88, 90, 91, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 106, 107, 108, 109, 110, 111, 114, 116, 117, 119, 120, 121, 122, 123, 124, 125, 139, 140, 142, 146, 148, 149, 150, 151, 153, 155, 158, 160, 162, 164, 165, 167, 168, 170], "output": [1, 5, 7, 8, 13, 14, 16, 27, 29, 30, 31, 32, 35, 37, 38, 39, 43, 44, 47, 48, 50, 51, 53, 54, 55, 59, 64, 72, 75, 81, 82, 84, 89, 91, 92, 93, 94, 95, 96, 99, 100, 102, 103, 104, 105, 106, 108, 109, 111, 118, 119, 123, 124, 125, 126, 127, 129, 130, 131, 135, 136, 137, 140, 147, 150, 152, 158, 159, 160, 161, 164, 167, 168], "plotdir": [1, 84, 147], "hardcopi": [1, 82, 84, 147], "file": [1, 5, 6, 7, 8, 9, 11, 12, 14, 15, 18, 19, 20, 21, 22, 24, 25, 27, 29, 30, 32, 35, 37, 38, 39, 41, 43, 44, 45, 47, 48, 49, 50, 52, 54, 56, 62, 63, 64, 66, 70, 75, 77, 78, 81, 83, 86, 89, 91, 93, 94, 96, 97, 98, 99, 100, 101, 103, 106, 107, 109, 111, 112, 113, 115, 118, 119, 120, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 141, 143, 144, 145, 146, 147, 148, 149, 150, 152, 155, 156, 157, 158, 159, 161, 164, 165, 166, 168], "put": [1, 11, 16, 30, 31, 44, 58, 62, 63, 71, 88, 93, 101, 125, 146], "overwrit": [1, 91, 98, 103], "ok": [1, 39, 40, 91, 99, 109, 120, 160, 164], "old": [1, 7, 22, 24, 34, 42, 58, 59, 84, 91, 99, 100, 101, 104, 116, 124, 126, 127, 132, 135, 137, 140, 151, 162], "afterfram": [1, 29, 81], "produc": [1, 3, 24, 29, 32, 37, 38, 39, 43, 47, 48, 55, 57, 58, 63, 71, 76, 80, 81, 97, 115, 116, 132, 147, 164], "frame": [1, 2, 3, 29, 36, 37, 47, 55, 71, 77, 81, 82, 84, 88, 91, 95, 97, 99, 103, 105, 109, 125, 135, 136, 139, 147, 150, 152, 153], "done": [1, 6, 7, 8, 11, 13, 16, 21, 22, 30, 36, 38, 39, 42, 47, 50, 55, 57, 58, 60, 63, 66, 70, 71, 75, 81, 82, 84, 88, 92, 93, 96, 109, 115, 120, 124, 125, 129, 139, 140, 142, 147, 149, 151, 161, 164, 165, 166], "beforefram": [1, 29, 127], "befor": [1, 3, 4, 6, 14, 19, 30, 32, 34, 36, 37, 38, 39, 42, 43, 44, 47, 57, 58, 59, 60, 62, 63, 66, 67, 71, 76, 77, 84, 88, 91, 97, 99, 104, 106, 111, 115, 116, 118, 119, 120, 131, 135, 136, 138, 140, 143, 144, 148, 149, 162, 164, 165], "start": [1, 2, 4, 5, 6, 7, 9, 13, 14, 19, 26, 29, 30, 32, 34, 36, 38, 39, 40, 41, 42, 43, 47, 48, 49, 51, 55, 57, 58, 59, 60, 61, 62, 63, 66, 70, 74, 75, 77, 82, 84, 88, 99, 103, 104, 110, 111, 115, 116, 124, 127, 132, 138, 139, 140, 142, 144, 151, 154, 158, 160, 162, 167], "printfig": 1, "png": [1, 13, 38, 39, 42, 43, 55, 63, 70, 71, 125, 130, 142], "make": [1, 5, 11, 13, 14, 19, 21, 22, 24, 26, 27, 29, 30, 34, 36, 38, 39, 41, 43, 44, 47, 50, 52, 54, 55, 58, 59, 62, 63, 64, 66, 67, 68, 71, 76, 78, 81, 84, 85, 88, 89, 91, 94, 95, 96, 97, 101, 103, 109, 114, 116, 118, 119, 123, 124, 125, 126, 127, 129, 130, 131, 132, 133, 135, 136, 140, 142, 148, 162, 164, 166, 167], "html": [1, 12, 13, 25, 30, 32, 38, 39, 43, 46, 47, 55, 58, 59, 75, 81, 82, 93, 97, 99, 100, 110, 111, 116, 118, 128, 130, 135, 136, 158], "latex": [1, 55, 81, 100], "exist": [1, 19, 23, 32, 33, 36, 38, 39, 55, 62, 66, 70, 71, 82, 94, 98, 101, 103, 106, 109, 120, 126, 127, 144, 158, 164, 166], "print_format": [1, 55], "print_frameno": [1, 55], "list": [1, 3, 4, 7, 8, 9, 11, 13, 17, 18, 19, 20, 24, 27, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 43, 47, 49, 55, 57, 58, 60, 61, 62, 63, 65, 66, 67, 68, 71, 72, 75, 76, 77, 82, 84, 86, 88, 91, 92, 94, 97, 98, 100, 101, 102, 103, 104, 106, 107, 109, 111, 115, 118, 123, 125, 127, 132, 135, 136, 137, 139, 142, 146, 148, 149, 150, 151, 152, 158, 159, 161, 164], "int": [1, 2, 3, 32, 34, 63, 91, 92, 94, 97, 98, 103, 106, 148, 149, 151, 158, 164], "print_figno": [1, 55, 118], "iplotclaw_figno": 1, "interact": [1, 13, 24, 38, 39, 43, 47, 50, 66, 78, 81, 82, 89, 99, 100, 104, 105, 108, 111, 124, 125, 142], "mode": [1, 13, 30, 109, 161], "displai": [1, 13, 38, 39, 43, 47, 55, 63, 82, 98, 116, 151], "latex_fnam": 1, "tex": 1, "latex_titl": 1, "go": [1, 5, 13, 16, 19, 24, 27, 30, 32, 38, 39, 58, 59, 60, 62, 67, 70, 71, 77, 84, 88, 91, 93, 96, 97, 102, 117, 124, 125, 132, 139, 143, 147, 153, 158, 162, 166, 170], "result": [1, 3, 4, 7, 9, 12, 17, 18, 19, 27, 28, 31, 32, 34, 35, 36, 38, 39, 40, 45, 46, 47, 48, 51, 52, 57, 58, 59, 62, 63, 66, 68, 71, 72, 75, 77, 81, 82, 83, 84, 87, 91, 93, 96, 98, 102, 105, 109, 115, 116, 118, 119, 123, 125, 126, 127, 128, 130, 132, 135, 136, 144, 148, 149, 150, 152, 160, 162, 164, 166], "latex_framesperpag": 1, "how": [1, 6, 7, 12, 16, 24, 26, 30, 31, 32, 34, 36, 38, 39, 41, 42, 44, 47, 50, 55, 59, 63, 64, 66, 70, 75, 76, 77, 81, 91, 93, 95, 96, 97, 101, 104, 108, 109, 111, 113, 114, 115, 116, 120, 125, 127, 129, 130, 135, 138, 139, 140, 147, 148, 151, 153, 162, 164, 168], "mani": [1, 3, 4, 6, 12, 13, 18, 19, 22, 23, 24, 30, 36, 38, 39, 40, 44, 45, 46, 49, 50, 55, 56, 58, 63, 64, 66, 67, 70, 75, 76, 77, 82, 84, 85, 86, 88, 93, 96, 101, 103, 108, 109, 115, 117, 118, 119, 125, 127, 128, 129, 130, 134, 137, 140, 142, 147, 148, 149, 151, 162, 167], "try": [1, 30, 31, 38, 39, 40, 47, 55, 57, 62, 63, 70, 82, 90, 93, 96, 97, 103, 105, 107, 108, 109, 111, 116, 148, 160, 164, 165], "page": [1, 4, 9, 11, 13, 15, 17, 19, 20, 24, 26, 30, 52, 57, 59, 60, 61, 62, 93, 96, 99, 100, 107, 110, 112, 116, 118, 126, 130, 135, 136, 137, 143, 145, 147, 153, 156, 157, 166, 167], "latex_framesperlin": 1, "latex_figsperlin": 1, "recal": [1, 12, 42, 149], "latex_pdf": 1, "run": [1, 5, 6, 7, 12, 13, 14, 16, 19, 22, 24, 26, 27, 30, 34, 35, 36, 37, 42, 43, 45, 46, 47, 48, 54, 55, 56, 58, 59, 60, 61, 62, 63, 64, 66, 68, 71, 77, 78, 81, 82, 84, 85, 87, 89, 91, 94, 95, 96, 98, 101, 105, 107, 108, 109, 111, 113, 115, 118, 119, 120, 124, 125, 126, 127, 128, 129, 131, 132, 134, 139, 140, 150, 151, 152, 158, 160, 161, 164, 167], "pdflatex": 1, "pdf": [1, 32], "index": [1, 6, 13, 24, 25, 29, 35, 37, 47, 58, 59, 82, 94, 96, 99, 101, 102, 109, 118, 127, 132, 136, 148, 149, 150, 151, 152], "call": [1, 6, 9, 22, 24, 29, 32, 36, 37, 41, 44, 47, 54, 55, 67, 70, 71, 75, 77, 82, 84, 88, 89, 91, 92, 97, 98, 101, 103, 104, 106, 108, 109, 115, 116, 118, 119, 123, 124, 126, 127, 136, 140, 142, 144, 146, 148, 150, 151, 152, 158, 164, 167], "_plotindex": [1, 47, 118], "These": [1, 4, 5, 12, 16, 18, 19, 20, 25, 30, 31, 32, 34, 36, 41, 45, 47, 52, 55, 58, 63, 64, 67, 70, 71, 78, 82, 84, 88, 93, 96, 97, 98, 100, 106, 108, 112, 114, 115, 116, 118, 119, 125, 126, 127, 128, 132, 135, 136, 137, 139, 149, 153, 158, 159, 162, 166, 170], "new_plotfigur": [1, 2, 47, 55, 82, 147], "figno": [1, 2, 47, 55, 82, 84, 118, 147], "getfram": [1, 3, 84], "frameno": [1, 3, 29, 37], "clawsolut": 1, "solut": [1, 3, 4, 5, 16, 18, 19, 24, 27, 29, 31, 36, 37, 39, 47, 49, 51, 64, 71, 75, 77, 81, 84, 89, 91, 94, 96, 97, 98, 101, 102, 104, 106, 107, 108, 115, 116, 123, 124, 128, 135, 139, 140, 147, 148, 149, 150, 152, 160, 167, 170], "read": [1, 4, 5, 7, 19, 30, 32, 34, 35, 37, 38, 39, 47, 48, 49, 52, 53, 57, 62, 63, 64, 67, 70, 71, 75, 77, 81, 89, 91, 97, 98, 103, 109, 124, 125, 127, 128, 133, 135, 136, 150, 151, 152, 158, 162, 164, 167, 168], "fort": [1, 8, 29, 34, 36, 47, 71, 81, 97, 103, 120, 124, 125, 126, 135, 139, 148, 149, 150, 152, 161, 168], "q000n": [1, 8], "n": [1, 6, 16, 17, 19, 32, 34, 47, 51, 68, 84, 99, 105, 116, 118, 127, 142, 148, 151, 167, 170], "find": [1, 3, 4, 6, 12, 19, 26, 29, 30, 31, 32, 51, 55, 62, 66, 75, 78, 81, 86, 93, 101, 106, 107, 109, 111, 113, 127, 158, 165], "onc": [1, 5, 13, 24, 30, 31, 38, 39, 55, 59, 60, 61, 62, 70, 71, 75, 77, 84, 88, 98, 99, 100, 101, 106, 109, 125, 127, 133], "framesoln_dict": 1, "It": [1, 4, 6, 12, 19, 22, 24, 30, 31, 34, 36, 47, 49, 52, 53, 55, 57, 58, 63, 67, 75, 81, 82, 88, 91, 94, 97, 98, 99, 104, 108, 111, 115, 116, 120, 125, 135, 139, 142, 143, 144, 148, 149, 151, 162, 164, 165, 166, 167], "q": [1, 3, 5, 6, 16, 19, 22, 24, 29, 36, 37, 47, 71, 77, 81, 84, 88, 89, 94, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 108, 115, 120, 123, 125, 141, 148, 149, 150, 152, 162, 167, 168, 170], "onli": [1, 3, 5, 6, 8, 12, 13, 16, 18, 19, 21, 24, 29, 30, 32, 34, 36, 37, 41, 42, 45, 46, 47, 49, 52, 55, 58, 59, 60, 62, 63, 64, 67, 68, 71, 72, 75, 76, 77, 78, 82, 88, 91, 94, 97, 98, 99, 101, 103, 104, 105, 106, 108, 109, 110, 113, 115, 118, 119, 124, 125, 126, 127, 130, 132, 135, 139, 140, 141, 142, 143, 144, 146, 147, 148, 149, 150, 151, 152, 154, 158, 162, 164, 165, 166, 167, 170], "separ": [1, 30, 34, 36, 46, 55, 58, 63, 67, 72, 96, 104, 109, 142, 164], "clearfram": [1, 84], "remov": [1, 3, 22, 31, 36, 43, 56, 58, 62, 63, 66, 84, 99, 111, 118, 119, 122, 123, 135, 137, 144, 151, 164, 165], "more": [1, 2, 3, 4, 5, 7, 10, 12, 13, 14, 16, 17, 18, 19, 22, 24, 26, 28, 30, 31, 32, 34, 36, 38, 41, 47, 48, 49, 50, 52, 55, 57, 58, 59, 61, 62, 63, 64, 65, 66, 70, 71, 72, 75, 81, 82, 83, 84, 85, 86, 89, 91, 92, 94, 96, 97, 98, 99, 100, 101, 102, 104, 105, 106, 108, 109, 111, 114, 115, 116, 118, 119, 120, 123, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 140, 142, 143, 144, 146, 147, 148, 149, 150, 151, 153, 154, 158, 160, 161, 162, 164, 165, 166, 167, 170], "yet": [1, 13, 18, 22, 27, 52, 56, 58, 61, 63, 81, 104, 118, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 140, 148, 150, 169], "clearfigur": 1, "clear": [1, 2, 6, 71, 84, 135], "paramet": [1, 6, 7, 9, 16, 18, 19, 22, 27, 29, 32, 34, 35, 36, 38, 39, 42, 43, 45, 48, 49, 50, 52, 55, 57, 66, 67, 68, 71, 75, 76, 77, 81, 87, 88, 91, 92, 97, 98, 100, 102, 103, 106, 109, 112, 115, 119, 125, 130, 132, 135, 137, 139, 140, 141, 143, 144, 150, 152, 154, 159, 162, 164, 165, 167], "first": [1, 3, 5, 13, 14, 19, 21, 22, 24, 30, 32, 34, 36, 37, 38, 39, 40, 41, 42, 55, 58, 59, 62, 63, 66, 70, 71, 82, 84, 88, 89, 94, 97, 98, 99, 101, 104, 105, 106, 108, 109, 111, 113, 115, 119, 123, 128, 136, 140, 141, 142, 144, 148, 150, 151, 158, 160, 162, 164, 170], "sure": [1, 19, 22, 30, 43, 58, 59, 60, 61, 62, 71, 78, 88, 97, 99, 101, 103, 107, 109, 143, 164, 165, 166], "previou": [1, 30, 31, 47, 57, 59, 61, 62, 67, 70, 71, 84, 88, 104, 113, 119, 124, 125, 126, 127, 132, 139, 144, 148, 149, 150, 152, 162, 164], "chang": [1, 6, 8, 13, 15, 16, 18, 19, 21, 22, 27, 30, 31, 32, 34, 36, 43, 44, 49, 54, 55, 56, 57, 58, 59, 62, 63, 66, 67, 68, 70, 71, 76, 77, 78, 81, 84, 88, 89, 95, 97, 98, 106, 109, 110, 113, 114, 115, 116, 138, 140, 144, 145, 148, 149, 150, 151, 152, 154, 156, 157, 162, 165, 167], "re": [1, 17, 30, 43, 47, 66, 71, 78, 82, 84, 88, 105, 115, 116, 129, 165], "session": [1, 38, 39, 40, 100, 105], "iplotclaw": [1, 13, 24, 38, 39, 47, 50, 81, 82, 100, 111], "being": [1, 3, 4, 8, 13, 18, 19, 34, 42, 47, 49, 52, 57, 62, 70, 72, 84, 91, 97, 102, 103, 104, 109, 111, 113, 115, 118, 124, 126, 128, 137, 140, 142, 144, 148, 151, 165, 167], "getfigur": 1, "fignam": [1, 84], "getax": 1, "axesnam": [1, 84], "clawplotax": [1, 2, 3, 29, 82, 127, 132, 136, 147], "search": [1, 13, 14, 17, 62, 81, 96, 109, 111, 125, 127, 142, 146], "over": [1, 3, 5, 6, 13, 16, 17, 24, 30, 32, 34, 36, 41, 42, 47, 48, 49, 50, 52, 55, 57, 63, 64, 70, 71, 72, 75, 81, 97, 98, 104, 115, 118, 119, 120, 128, 130, 140, 142, 144, 147, 149, 150, 151, 161, 162, 167, 170], "found": [1, 4, 5, 6, 11, 12, 13, 16, 19, 24, 26, 29, 31, 34, 37, 38, 39, 43, 45, 47, 49, 51, 52, 54, 58, 63, 66, 67, 72, 80, 82, 83, 84, 88, 92, 99, 103, 107, 109, 111, 113, 116, 124, 127, 139, 143, 147, 154, 158, 164, 165], "uniqu": [1, 77, 118, 124, 158], "getitem": 1, "itemnam": [1, 84], "showitem": 1, "plotfram": 1, "number": [1, 2, 3, 4, 6, 8, 12, 16, 17, 19, 21, 24, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 46, 47, 49, 55, 58, 63, 66, 71, 76, 77, 78, 84, 88, 89, 91, 92, 93, 94, 96, 97, 98, 99, 101, 103, 104, 106, 108, 109, 110, 113, 115, 116, 118, 119, 120, 122, 123, 124, 125, 126, 127, 129, 136, 139, 140, 142, 148, 149, 150, 151, 152, 158, 159, 160, 164, 167], "conveni": [1, 29, 34, 36, 38, 39, 42, 47, 55, 84, 91, 93, 96, 98, 100, 108, 167, 170], "pyclaw": [1, 3, 4, 12, 17, 25, 26, 29, 30, 31, 46, 47, 59, 60, 61, 77, 78, 84, 85, 95, 99, 101, 107, 111, 138, 140, 141, 146], "plotter": [1, 3, 29, 84], "frametool": [1, 29, 84, 118, 130], "printfram": [1, 81], "still": [1, 5, 7, 8, 13, 16, 18, 19, 24, 26, 28, 34, 42, 45, 47, 49, 55, 56, 67, 70, 71, 77, 81, 86, 97, 104, 110, 115, 116, 118, 123, 124, 125, 126, 127, 128, 130, 135, 137, 139, 140, 151, 158], "clawplotdata": [2, 3, 29, 47, 55, 82, 84, 91, 147], "next": [2, 3, 6, 13, 20, 36, 38, 40, 47, 58, 71, 77, 82, 84, 87, 88, 96, 97, 99, 104, 108, 113, 115, 116, 118, 135, 136, 137, 148, 149, 151], "unus": [2, 97], "1001": 2, "figsiz": [2, 42, 70, 82, 136, 142, 147], "tupl": [2, 3, 32, 51, 63, 75, 82, 94, 97, 98, 164], "size": [2, 22, 32, 36, 37, 42, 47, 55, 63, 76, 77, 81, 94, 97, 99, 104, 125, 130, 135, 149, 150, 152, 154, 162, 164], "facecolor": [2, 82, 118, 136, 147], "background": [2, 81, 127, 147], "behind": [2, 42, 70, 144, 151], "By": [2, 15, 32, 44, 49, 51, 55, 57, 63, 75, 82, 84, 88, 94, 98, 100, 107, 127, 142, 145, 156, 157, 164, 170], "theme": 2, "tan": [2, 82], "public": [2, 4, 13, 17, 23, 138], "probabl": [2, 13, 30, 55, 68, 70, 110, 111], "w": [2, 17, 51, 140, 170], "white": [2, 63, 118], "keyword": [2, 3, 82, 88, 93, 94, 97, 103, 109, 116, 127, 147, 158, 164], "12": [2, 34, 42, 55, 70, 82, 142, 147], "5": [2, 4, 5, 8, 9, 11, 13, 18, 19, 21, 27, 32, 34, 35, 36, 37, 41, 42, 45, 47, 49, 51, 55, 56, 57, 58, 59, 63, 64, 66, 67, 68, 70, 75, 82, 92, 94, 98, 99, 101, 102, 104, 110, 111, 115, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 148, 149, 150, 151, 152, 158, 161, 162, 164, 169], "would": [2, 3, 12, 13, 16, 26, 29, 30, 34, 36, 41, 44, 55, 57, 59, 62, 64, 66, 67, 70, 72, 75, 77, 82, 86, 88, 91, 94, 98, 109, 116, 125, 142, 143, 144, 147, 148, 151, 158, 162, 167], "inch": [2, 55, 63, 82, 147], "red": [2, 3, 30, 47, 63, 82, 116, 147], "option": [2, 12, 13, 16, 19, 22, 24, 27, 30, 31, 32, 34, 36, 37, 38, 39, 43, 44, 51, 54, 57, 60, 62, 66, 71, 77, 81, 82, 88, 89, 91, 93, 94, 95, 97, 98, 100, 103, 104, 105, 108, 109, 111, 112, 115, 116, 118, 120, 123, 124, 125, 128, 130, 133, 135, 137, 142, 146, 147, 148, 150, 151, 152, 153, 158, 164], "clf_each_fram": 2, "clf": 2, "axes1": [2, 84], "shown": [3, 13, 18, 19, 58, 63, 67, 68, 71, 78, 98, 118, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 142, 164, 167], "fragment": 3, "typic": [3, 22, 42, 66, 67, 71, 72, 75, 77, 78, 84, 89, 99, 101, 104, 106, 115, 149, 150, 161, 162, 165, 166, 167, 170], "assum": [3, 5, 22, 24, 32, 34, 36, 37, 39, 42, 49, 51, 52, 55, 57, 58, 59, 63, 71, 75, 81, 97, 98, 100, 101, 102, 108, 109, 115, 123, 136, 142, 143, 148, 151, 158, 159, 162, 164, 166, 170], "instanc": [3, 30, 37, 55, 75, 78, 84, 88, 89, 91, 94, 97, 98, 101, 142, 151], "type": [3, 4, 7, 13, 17, 18, 22, 30, 32, 38, 39, 43, 47, 48, 55, 66, 71, 82, 83, 84, 88, 89, 90, 92, 94, 97, 99, 100, 104, 105, 108, 109, 142, 149, 150, 151, 158, 159, 162, 164, 170], "dimension": [3, 7, 8, 17, 19, 24, 27, 32, 34, 36, 38, 39, 47, 49, 52, 56, 71, 94, 101, 123, 124, 126, 129, 150, 151, 152, 164, 167], "point": [3, 5, 6, 13, 15, 16, 17, 22, 30, 32, 35, 36, 38, 39, 41, 42, 44, 47, 48, 49, 50, 51, 52, 55, 57, 58, 59, 61, 62, 63, 64, 71, 72, 75, 88, 98, 99, 103, 109, 110, 111, 115, 118, 126, 128, 130, 136, 139, 140, 142, 143, 144, 145, 146, 148, 149, 150, 151, 156, 157, 158, 162, 164, 165, 167], "slice": [3, 49, 71, 140], "scatter": [3, 24, 71], "radial": [3, 18, 34, 49, 51, 151, 167], "symmetr": [3, 49, 51, 167], "between": [3, 4, 5, 6, 13, 16, 25, 27, 30, 32, 33, 34, 36, 37, 41, 51, 55, 59, 63, 70, 71, 72, 75, 76, 78, 81, 91, 94, 98, 104, 106, 107, 109, 110, 111, 115, 118, 124, 125, 140, 142, 143, 148, 149, 150, 151, 152, 153, 154, 161, 162, 164, 166, 167], "plot_var": [3, 29, 47, 55, 82, 83], "fill_var2": 3, "diment": 3, "raster": [3, 55, 57, 135, 162], "contour": [3, 32, 47, 55, 57, 71, 110, 147, 164], "pcolor": [3, 47, 81, 110, 118, 135, 164], "2d_schlieren": 3, "schlieren": [3, 71], "2d_patch": [3, 24], "cell": [3, 4, 5, 7, 8, 15, 16, 18, 19, 22, 24, 27, 29, 34, 35, 36, 37, 47, 48, 49, 55, 57, 63, 70, 71, 72, 76, 77, 78, 88, 94, 97, 99, 102, 104, 106, 108, 115, 119, 120, 124, 125, 126, 127, 128, 129, 130, 132, 136, 140, 143, 144, 145, 148, 149, 150, 152, 154, 159, 161, 162, 167, 170], "patch": [3, 6, 7, 16, 19, 24, 29, 34, 42, 55, 71, 75, 76, 77, 81, 82, 97, 99, 103, 106, 115, 125, 127, 130, 132, 144, 147, 149, 161, 162, 167], "edg": [3, 6, 15, 16, 19, 29, 32, 34, 35, 36, 37, 41, 49, 63, 75, 94, 102, 140, 142, 145, 149, 150, 152, 167], "hillshad": [3, 118], "come": [3, 30, 82, 84, 93, 99, 104, 123, 162, 167], "parent": [3, 29, 94, 106, 109], "integ": [3, 34, 35, 36, 47, 55, 63, 68, 70, 82, 89, 97, 103, 115, 118, 126, 129, 140, 148, 151, 158, 164], "compon": [3, 16, 19, 22, 24, 27, 39, 47, 61, 62, 71, 77, 81, 101, 103, 105, 106, 115, 123, 132, 141, 148, 149, 150, 162, 167], "correspond": [3, 6, 12, 25, 27, 29, 32, 35, 36, 37, 47, 49, 51, 52, 57, 58, 59, 63, 71, 75, 82, 88, 92, 94, 97, 98, 101, 103, 106, 115, 116, 140, 142, 143, 148, 149, 150, 151, 152, 158, 162, 166, 167], "appli": [3, 4, 5, 6, 13, 16, 17, 19, 27, 32, 52, 55, 57, 68, 70, 75, 82, 84, 92, 94, 97, 104, 115, 139, 148, 151, 167], "comput": [3, 4, 5, 6, 13, 16, 17, 18, 19, 29, 31, 32, 34, 35, 36, 37, 42, 47, 49, 51, 55, 57, 62, 63, 64, 66, 72, 75, 81, 82, 84, 89, 91, 94, 96, 97, 98, 99, 104, 108, 111, 113, 115, 118, 119, 120, 124, 125, 129, 132, 135, 137, 140, 144, 148, 150, 151, 152, 159, 162, 167, 170], "signatur": [3, 89, 92, 94, 95, 97, 102, 158], "hold": [3, 37, 84, 108, 115], "current": [3, 5, 13, 14, 19, 22, 24, 26, 29, 30, 31, 32, 34, 37, 41, 42, 44, 47, 48, 49, 52, 57, 58, 59, 61, 62, 63, 64, 71, 73, 77, 82, 84, 94, 97, 98, 99, 104, 106, 109, 111, 115, 116, 118, 124, 126, 127, 137, 139, 143, 147, 148, 149, 150, 151, 152, 154, 158, 159, 162, 164, 166], "afteritem": [3, 29], "afterpatch": [3, 29], "There": [3, 6, 13, 24, 36, 39, 43, 55, 58, 59, 66, 70, 75, 77, 84, 85, 98, 105, 113, 126, 127, 147, 148, 154, 159, 160, 167, 169], "calcul": [3, 5, 6, 18, 19, 29, 32, 35, 37, 48, 51, 71, 75, 82, 94, 102, 104, 118, 120, 125, 164], "cd": [3, 13, 30, 38, 39, 40, 56, 58, 59, 61, 62, 84, 93, 96, 99, 105, 116, 160], "On": [3, 5, 13, 55, 76, 85, 126, 136, 142, 146, 167], "ylower": [3, 24, 29, 42, 89, 127, 150, 162, 164], "patchno": [3, 29], "out": [3, 16, 17, 26, 28, 31, 32, 34, 36, 37, 38, 39, 42, 47, 48, 49, 54, 56, 57, 58, 59, 62, 63, 64, 65, 66, 71, 75, 82, 85, 86, 88, 89, 91, 97, 98, 99, 100, 103, 108, 110, 111, 113, 116, 125, 127, 129, 130, 140, 142, 149, 150, 152, 158, 164, 165], "lower": [3, 24, 32, 34, 35, 41, 49, 57, 70, 77, 94, 99, 142, 144, 148, 150, 152, 162, 164, 166], "left": [3, 5, 10, 13, 16, 20, 27, 29, 32, 34, 57, 77, 84, 94, 101, 102, 108, 118, 126, 132, 135, 136, 137, 138, 139, 140, 143, 149, 162, 164, 166, 170], "mappedgrid": [3, 71], "map": [3, 16, 18, 31, 32, 42, 48, 63, 70, 71, 82, 86, 89, 94, 96, 101, 115, 123, 127, 132, 141, 164, 170], "mapc2p": [3, 27, 29, 49, 71, 89, 94, 132], "underli": [3, 55, 125], "requir": [3, 4, 16, 18, 19, 22, 24, 27, 29, 30, 32, 34, 36, 37, 38, 39, 43, 48, 49, 51, 52, 59, 62, 70, 71, 75, 78, 81, 84, 85, 88, 89, 94, 97, 100, 101, 104, 105, 106, 108, 109, 110, 115, 116, 118, 119, 120, 123, 125, 128, 130, 132, 135, 137, 140, 141, 142, 147, 148, 149, 150, 151, 152, 158, 159, 162, 165, 168, 170], "depend": [3, 13, 16, 30, 31, 32, 34, 37, 38, 39, 43, 44, 50, 52, 55, 66, 68, 71, 75, 82, 87, 97, 102, 103, 104, 109, 111, 115, 127, 144, 149, 151, 164, 165, 167, 170], "summar": [3, 30, 33, 115, 117, 167], "plotstyl": [3, 47, 82, 147], "anyth": [3, 6, 30, 31, 62, 67, 116, 127], "valid": [3, 52, 75, 91, 98, 103, 106, 125, 151, 158, 159, 164], "fmt": 3, "group": [3, 13, 26, 30, 32, 52, 93, 97, 99, 107, 124, 140], "solid": [3, 16, 55, 75, 101, 147, 148, 150, 152], "dash": [3, 99], "o": [3, 5, 17, 41, 42, 43, 70, 72, 82, 85, 86, 89, 97, 98, 107, 127, 150, 164, 167], "circl": [3, 51, 82, 118], "bo": 3, "blue": [3, 11, 42, 47, 63, 70, 82, 142, 164], "though": [3, 42, 78, 158, 162], "also": [3, 4, 5, 6, 7, 8, 9, 11, 12, 16, 17, 18, 19, 20, 22, 24, 25, 26, 27, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 44, 45, 46, 47, 48, 49, 51, 52, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 66, 67, 70, 71, 75, 76, 77, 78, 81, 82, 84, 88, 90, 91, 94, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 118, 119, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 146, 148, 149, 150, 151, 152, 153, 156, 157, 158, 159, 160, 161, 162, 164, 165, 166, 167, 169, 170], "overrul": 3, "r": [3, 4, 6, 17, 30, 47, 51, 56, 58, 70, 71, 74, 82, 88, 92, 99, 101, 118, 140, 142, 147, 164, 170], "ff0000": [3, 63], "No": [3, 43, 55, 59, 71, 94, 104, 133, 140, 148, 151, 165], "extra": [3, 55, 141], "give": [3, 6, 9, 10, 13, 16, 17, 18, 19, 26, 30, 32, 34, 35, 36, 38, 39, 47, 49, 56, 63, 64, 70, 72, 75, 76, 77, 82, 84, 99, 100, 104, 116, 120, 124, 125, 129, 132, 142, 148, 151, 162, 164, 166], "polygon": [3, 7, 41, 55, 63, 130, 164], "curv": [3, 47, 81, 142], "fill_between": 3, "plot_var2": 3, "zero": [3, 16, 32, 34, 42, 44, 47, 63, 71, 72, 88, 101, 102, 106, 108, 132, 142, 143], "fill_wher": 3, "plotitem": [3, 29, 47, 82, 147], "mean": [3, 13, 24, 30, 34, 42, 47, 52, 56, 62, 71, 72, 98, 99, 115, 118, 140, 143, 148, 150, 152, 166], "map_2d_to_1d": 3, "In": [3, 5, 6, 8, 11, 12, 15, 16, 18, 19, 21, 22, 24, 29, 32, 34, 36, 41, 44, 47, 48, 49, 52, 55, 56, 57, 58, 59, 62, 63, 64, 66, 67, 70, 71, 72, 74, 75, 77, 78, 82, 83, 84, 88, 89, 94, 96, 97, 98, 99, 100, 101, 102, 104, 106, 109, 111, 112, 113, 115, 118, 119, 120, 123, 124, 125, 127, 128, 132, 136, 139, 140, 142, 144, 145, 146, 148, 149, 151, 156, 157, 162, 164, 165, 167, 170], "about": [3, 5, 7, 13, 14, 16, 18, 19, 24, 27, 35, 36, 37, 38, 39, 43, 49, 51, 52, 57, 59, 63, 66, 68, 71, 77, 83, 85, 88, 96, 97, 99, 104, 111, 116, 124, 128, 130, 135, 136, 140, 147, 149, 150, 151, 162, 165, 167, 170], "j": [3, 4, 5, 15, 17, 22, 24, 29, 35, 42, 56, 63, 70, 71, 77, 84, 96, 97, 115, 119, 120, 144, 145], "v": [3, 16, 27, 31, 32, 34, 36, 37, 51, 64, 67, 116, 124, 149, 162], "radiu": [3, 151, 158, 159, 164], "q0_vs_radiu": 3, "convert": [3, 24, 27, 32, 35, 37, 45, 51, 55, 62, 63, 66, 75, 78, 89, 96, 101, 109, 110, 127, 130, 136, 137, 148, 149, 158, 162, 166], "numpi": [3, 13, 32, 34, 36, 37, 42, 51, 70, 85, 87, 88, 89, 91, 94, 101, 106, 107, 108, 110, 116, 137, 141, 142, 150, 164, 165], "sqrt": [3, 34, 37, 49, 68, 88, 101, 102, 108, 150], "q0": [3, 101], "work": [3, 5, 8, 13, 16, 19, 21, 22, 24, 26, 27, 28, 30, 31, 34, 36, 38, 39, 43, 48, 52, 55, 56, 57, 58, 59, 60, 61, 62, 63, 70, 71, 74, 75, 76, 82, 85, 86, 87, 88, 90, 91, 92, 96, 97, 98, 99, 102, 104, 105, 110, 111, 113, 114, 115, 116, 118, 121, 122, 123, 124, 125, 126, 127, 130, 132, 133, 138, 140, 146, 147, 148, 149, 153, 159, 162, 165, 169], "symbol": [3, 71, 111], "best": [3, 4, 16, 24, 28, 30, 36, 44, 49, 55, 57, 59, 60, 66, 72, 74, 76, 81, 82, 97, 101, 113, 114, 115, 116, 127, 138, 140, 151, 155, 158, 162, 167], "descript": [3, 4, 6, 9, 24, 25, 27, 32, 36, 37, 63, 71, 75, 78, 81, 96, 97, 109, 113, 115, 137, 140, 141, 151, 158, 162, 170], "celledges_show": [3, 24], "draw": 3, "amr_celledges_show": 3, "level": [3, 6, 7, 16, 19, 25, 29, 31, 34, 36, 41, 42, 47, 48, 50, 51, 52, 55, 58, 59, 61, 62, 71, 72, 76, 77, 89, 91, 94, 96, 97, 98, 104, 111, 112, 115, 116, 119, 120, 124, 125, 127, 130, 139, 142, 143, 146, 148, 149, 150, 152, 161, 162, 164, 166, 167], "patchedges_show": [3, 24], "mostli": [3, 81, 96, 130, 137], "contour_level": [3, 164], "three": [3, 13, 17, 24, 32, 34, 37, 52, 55, 67, 71, 75, 99, 103, 109, 116, 142, 148, 151, 162, 164, 167], "contour_nlevel": 3, "contour_min": 3, "minimum": [3, 19, 34, 47, 55, 75, 108, 125, 151, 164], "contour_max": 3, "maximum": [3, 24, 32, 34, 35, 36, 48, 71, 72, 104, 108, 115, 119, 120, 127, 130, 148, 149, 150, 152, 158, 159], "contour_color": 3, "specif": [3, 5, 12, 19, 24, 30, 32, 47, 48, 49, 51, 55, 56, 62, 65, 67, 68, 77, 86, 87, 89, 91, 96, 97, 98, 102, 103, 109, 113, 125, 126, 127, 130, 147, 148, 149, 150, 152, 159, 162], "b": [3, 5, 17, 30, 32, 34, 35, 36, 37, 42, 47, 49, 56, 58, 59, 68, 72, 82, 104, 115, 123, 130, 142, 143, 144, 151, 164, 166], "0000ff": [3, 63], "colormap": [3, 32, 42, 50, 55, 70, 71, 81, 83, 124, 130, 164], "amr_contour_color": 3, "As": [3, 18, 19, 39, 42, 48, 49, 52, 58, 59, 63, 64, 88, 108, 110, 114, 118, 119, 130, 140, 141, 144, 151, 154, 160, 167], "black": [3, 47], "subsequ": [3, 10, 71], "both": [3, 16, 18, 19, 30, 32, 35, 36, 37, 38, 39, 41, 42, 47, 52, 57, 60, 62, 67, 70, 71, 75, 77, 89, 97, 98, 99, 104, 105, 115, 116, 123, 124, 127, 130, 135, 140, 141, 142, 144, 148, 149, 150, 152, 156, 162, 167], "fine": [3, 19, 34, 35, 36, 42, 49, 58, 74, 78, 96, 101, 115, 118, 125, 132, 142, 144, 148, 149, 151, 162, 167], "coars": [3, 34, 36, 55, 115, 118, 125, 132, 148, 162, 167], "anoth": [3, 19, 24, 34, 36, 42, 47, 51, 55, 62, 63, 77, 81, 85, 93, 104, 107, 116, 127, 158, 167], "refin": [3, 4, 5, 7, 8, 17, 19, 24, 36, 48, 49, 52, 55, 56, 57, 70, 71, 77, 78, 88, 125, 127, 128, 130, 132, 142, 144, 147, 148, 149, 150, 161, 162, 167], "region": [3, 6, 7, 13, 16, 19, 24, 34, 36, 41, 42, 48, 52, 53, 55, 63, 68, 72, 75, 78, 113, 118, 127, 130, 132, 143, 144, 149, 150, 154, 162, 164], "lack": 3, "hidden": [3, 66, 82], "blank": [3, 35, 63, 158], "coarser": [3, 16, 19, 57, 125, 144, 148, 149, 167], "easili": [3, 13, 30, 34, 55, 58, 71, 82, 89, 94, 105, 109, 116, 118, 130, 153], "contour_show": 3, "commonli": [3, 19, 71, 82, 84], "amr_contour_show": 3, "determin": [3, 5, 6, 32, 34, 37, 42, 47, 48, 49, 52, 54, 55, 58, 63, 72, 75, 82, 92, 94, 97, 102, 106, 111, 115, 120, 124, 125, 139, 142, 143, 147, 148, 149, 151, 164, 167], "whether": [3, 6, 13, 16, 24, 51, 57, 60, 62, 64, 65, 66, 71, 86, 94, 97, 98, 102, 103, 104, 115, 116, 125, 140, 142, 148, 149, 151, 164], "view": [3, 4, 24, 36, 38, 39, 47, 48, 49, 51, 55, 57, 58, 63, 77, 81, 83, 84, 88, 99, 105, 110, 123, 127, 153, 155], "finest": [3, 19, 34, 36, 42, 47, 72, 127, 161, 164], "contour_kwarg": [3, 164], "pcolor_cmap": [3, 55], "pcolor_cmin": 3, "pcolor_cmax": 3, "thei": [3, 5, 6, 13, 16, 18, 19, 26, 29, 30, 32, 34, 36, 41, 42, 45, 47, 49, 52, 55, 58, 59, 62, 63, 64, 67, 70, 71, 77, 81, 94, 96, 101, 104, 109, 115, 116, 125, 132, 144, 147, 151, 154, 158, 162, 164, 167], "chosen": [3, 31, 34, 41, 42, 49, 55, 57, 70, 108, 115, 132, 143, 149], "vari": [3, 15, 17, 27, 32, 42, 48, 49, 57, 68, 72, 101, 103, 123, 130, 140, 141, 143, 145, 149, 151, 170], "yield": [3, 18, 19], "veri": [3, 5, 16, 17, 18, 19, 24, 49, 52, 55, 59, 60, 63, 75, 82, 86, 89, 97, 98, 99, 100, 101, 104, 116, 118, 120, 124, 135, 142, 144, 148, 159, 162], "confus": [3, 57, 62, 111, 132, 140], "add_colorbar": [3, 32, 164], "ad": [3, 12, 16, 22, 24, 26, 27, 29, 31, 34, 36, 37, 44, 47, 51, 57, 58, 59, 62, 63, 64, 68, 71, 72, 75, 82, 87, 89, 92, 94, 95, 98, 99, 111, 112, 113, 115, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 133, 135, 136, 137, 139, 144, 148, 149, 151, 154, 158, 161, 164, 168], "imshow_cmap": 3, "imshow_cmin": 3, "imshow_cmax": 3, "hillshade_vertical_exagger": 3, "vertic": [3, 32, 41, 52, 55, 63, 70, 142, 143, 151, 164, 166], "exagger": 3, "calul": 3, "hillshade_azimuth_degre": 3, "light": [3, 55, 71, 115], "sourc": [3, 4, 17, 18, 19, 25, 27, 30, 32, 44, 48, 49, 55, 56, 58, 59, 61, 62, 63, 65, 67, 68, 81, 86, 89, 93, 94, 95, 104, 105, 107, 108, 109, 113, 114, 116, 118, 125, 126, 127, 136, 137, 141, 143, 148, 150, 151, 152, 155, 156, 157, 158, 162], "azimuth": 3, "angl": [3, 16, 32, 51, 75], "315": 3, "northwest": 3, "360": [3, 51, 55, 75], "degre": [3, 32, 49, 51, 55, 63, 72, 75], "clockwis": [3, 34, 51, 75, 164], "north": [3, 34, 42, 49, 51, 70, 75], "recommend": [3, 4, 18, 19, 32, 34, 36, 38, 39, 58, 59, 60, 62, 76, 81, 90, 94, 96, 97, 99, 100, 104, 105, 107, 108, 115, 127, 135, 137, 148, 150, 152, 168], "proper": [3, 6, 15, 42, 47, 56, 57, 58, 59, 63, 68, 70, 71, 97, 109, 119, 125, 145, 149, 150, 156, 157, 158, 167], "interpret": [3, 32, 57, 75, 97, 127, 162], "peopl": [3, 4, 12, 13, 86], "hillshade_altitude_degre": 3, "altitud": 3, "horizon": 3, "45": [3, 104], "90": [3, 27, 32, 49, 55, 67, 75, 105, 107, 136], "hillshade_latlon": 3, "correct": [3, 18, 19, 22, 30, 44, 58, 59, 67, 68, 71, 82, 88, 94, 97, 99, 103, 109, 119, 120, 124, 144, 148, 150, 151, 152], "unit": [3, 32, 49, 50, 51, 56, 75, 94, 125, 136, 158], "z": [3, 42, 57, 63, 70, 71, 88, 94, 102, 108, 142, 148, 149, 162, 164], "111200": 3, "reflect": [3, 4, 5, 16, 30, 115, 127, 148, 150, 152], "relat": [3, 7, 19, 24, 26, 58, 78, 102, 113, 126, 130, 132, 143], "pre": [3, 13, 35, 59, 90, 97], "pend": 3, "amr_": [3, 7], "whose": [3, 49, 82, 89, 101, 102, 144, 148, 149, 164], "origin": [3, 6, 13, 16, 18, 19, 22, 30, 32, 36, 37, 45, 47, 56, 58, 63, 70, 76, 77, 89, 104, 109, 119, 125, 132, 139, 149, 150, 151, 152, 164], "hand": [3, 5, 19, 20, 21, 22, 68, 88, 116, 118, 135, 136, 137, 142], "higher": [3, 6, 18, 19, 55, 94, 104, 105, 115, 130, 140, 142, 143, 144], "shorter": [3, 115, 164], "last": [3, 20, 29, 34, 36, 59, 61, 82, 88, 89, 101, 108, 118, 124, 135, 136, 137, 148, 158], "repeatedli": [3, 99, 105, 149], "finer": [3, 7, 19, 34, 55, 115, 119, 120, 142, 148, 149], "celledg": [3, 32, 49], "colorbar_shrink": [3, 32], "colorbar_label": 3, "colorbar_tick": 3, "colorbar_tick_label": 3, "colorbar_extend": [3, 136], "colorbar_kwarg": [3, 127], "stand": [4, 132], "conserv": [4, 5, 6, 17, 18, 19, 98, 104, 106, 128, 141, 167, 170], "law": [4, 17, 63, 151, 170], "packag": [4, 27, 30, 31, 38, 39, 55, 59, 60, 67, 77, 78, 81, 85, 86, 88, 94, 96, 98, 100, 101, 103, 105, 108, 110, 111, 118, 129, 130, 165, 168], "wa": [4, 5, 6, 14, 19, 21, 22, 27, 31, 32, 34, 35, 36, 37, 42, 49, 52, 54, 58, 59, 66, 68, 70, 71, 75, 82, 99, 103, 104, 106, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 139, 142, 144, 161, 162, 164], "initi": [4, 5, 7, 12, 13, 18, 19, 24, 27, 32, 36, 37, 47, 48, 49, 51, 52, 55, 59, 64, 67, 71, 72, 75, 77, 78, 84, 86, 87, 88, 89, 91, 92, 94, 95, 97, 98, 102, 103, 104, 106, 107, 109, 112, 115, 124, 127, 130, 132, 140, 143, 148, 149, 150, 152, 154, 158, 162, 164], "develop": [4, 6, 7, 12, 13, 19, 20, 24, 25, 45, 52, 56, 58, 61, 62, 65, 70, 71, 81, 85, 86, 89, 96, 101, 104, 105, 111, 113, 116, 118, 127, 128, 130, 132, 135, 136, 137, 140, 143, 144, 150], "linear": [4, 5, 17, 18, 19, 32, 36, 37, 47, 49, 55, 72, 75, 82, 88, 92, 104, 118, 128, 140, 141, 142], "nonlinear": [4, 5, 17, 52, 92, 140, 148, 170], "hyperbol": [4, 5, 6, 17, 18, 19, 45, 78, 89, 96, 101, 102, 108, 140, 148, 151, 167, 170], "system": [4, 16, 17, 18, 19, 25, 39, 40, 48, 55, 56, 62, 63, 67, 76, 77, 86, 96, 97, 98, 99, 101, 102, 105, 108, 111, 116, 118, 140, 148, 150, 152, 160, 167, 170], "focu": [4, 48], "high": [4, 17, 34, 52, 55, 70, 72, 75, 78, 89, 96, 104, 140, 143, 144, 166, 167], "resolut": [4, 6, 17, 32, 34, 36, 42, 47, 64, 72, 75, 94, 104, 108, 109, 119, 123, 127, 128, 135, 140, 143, 162, 164, 166, 167], "godunov": [4, 94, 104, 148, 150, 152, 167], "method": [4, 5, 7, 17, 19, 34, 36, 37, 41, 45, 47, 57, 70, 72, 82, 84, 88, 91, 92, 94, 99, 103, 104, 109, 115, 116, 123, 140, 147, 148, 149, 150, 152, 158, 161, 162, 164, 167], "framework": [4, 86, 89, 124, 125], "applic": [4, 6, 15, 16, 18, 19, 21, 22, 24, 25, 26, 30, 31, 36, 37, 38, 39, 40, 44, 45, 46, 47, 48, 50, 59, 61, 62, 67, 70, 76, 77, 84, 93, 94, 95, 96, 98, 104, 109, 112, 114, 115, 116, 118, 119, 122, 123, 125, 126, 127, 129, 130, 140, 142, 144, 145, 148, 151, 156, 157, 162, 164, 165, 167, 168], "finit": [4, 17, 34, 36, 45, 49, 57, 63, 70, 71, 72, 75, 104, 130, 142, 151, 161, 162, 167], "volum": [4, 17, 31, 34, 36, 45, 49, 57, 63, 70, 71, 72, 96, 130, 142, 149, 151, 161, 162, 167], "riemann": [4, 5, 8, 22, 24, 25, 30, 31, 48, 59, 62, 67, 78, 86, 88, 94, 95, 104, 105, 106, 108, 111, 146, 148, 150, 152, 156, 157, 170], "solver": [4, 5, 6, 22, 24, 25, 27, 30, 48, 49, 60, 61, 62, 67, 85, 86, 87, 91, 94, 95, 98, 106, 118, 121, 123, 125, 126, 127, 128, 129, 130, 132, 137, 148, 150, 152, 156, 157, 170], "resolv": [4, 34, 36, 55, 58, 62, 113, 127, 144], "jump": [4, 5, 71, 84, 94, 104, 125, 148, 170], "discontinu": [4, 104, 170], "interfac": [4, 21, 24, 71, 86, 89, 92, 96, 97, 102, 104, 109, 140, 167, 168, 170], "wave": [4, 5, 6, 16, 17, 18, 27, 34, 42, 48, 49, 52, 55, 56, 75, 92, 94, 96, 101, 102, 104, 115, 123, 125, 126, 132, 141, 142, 143, 148, 149, 150, 151, 152, 154, 167], "propag": [4, 5, 6, 17, 18, 19, 27, 32, 49, 52, 55, 56, 75, 94, 96, 104, 115, 125, 140], "neighbor": [4, 18, 19, 36, 42, 70, 72, 115, 125, 144, 149, 150, 164], "formul": [4, 5, 19, 52, 68, 140, 148], "allow": [4, 6, 13, 24, 29, 30, 31, 34, 36, 37, 41, 42, 47, 48, 51, 54, 55, 57, 58, 62, 68, 70, 71, 75, 76, 78, 81, 82, 91, 96, 97, 98, 104, 106, 109, 110, 111, 115, 116, 119, 120, 123, 124, 125, 126, 127, 129, 130, 132, 135, 136, 137, 140, 142, 148, 150, 151, 152, 153, 158, 162, 164, 166], "easi": [4, 6, 11, 31, 41, 62, 71, 89, 98, 99, 100, 142, 153, 167], "extens": [4, 17, 19, 24, 26, 30, 32, 52, 55, 58, 62, 67, 71, 89, 96, 97, 109, 125, 126, 132, 148, 160, 164, 170], "problem": [4, 5, 7, 16, 17, 18, 19, 22, 26, 27, 29, 30, 31, 38, 39, 42, 45, 48, 49, 62, 66, 70, 71, 72, 75, 78, 82, 85, 87, 88, 93, 95, 96, 99, 102, 104, 107, 111, 116, 119, 120, 122, 123, 126, 130, 132, 136, 137, 140, 142, 144, 148, 149, 150, 151, 152, 153, 154, 161, 165], "algorithm": [4, 7, 19, 27, 34, 41, 42, 48, 56, 88, 94, 96, 97, 104, 108, 115, 127, 140, 142, 148, 150, 152, 164], "brief": [4, 59, 141, 151], "subroutin": [4, 6, 9, 16, 24, 34, 36, 67, 115, 123, 140, 148, 149, 161, 167, 170], "equat": [4, 5, 16, 17, 18, 27, 38, 39, 48, 49, 52, 64, 68, 82, 87, 88, 89, 91, 96, 97, 98, 101, 104, 105, 106, 118, 120, 123, 125, 127, 128, 140, 148, 150, 151, 152, 154, 162, 167, 170], "solv": [4, 5, 8, 16, 17, 18, 19, 22, 28, 38, 39, 49, 52, 60, 62, 64, 87, 89, 91, 94, 96, 101, 102, 105, 118, 128, 140, 141, 148, 162, 167, 170], "adapt": [4, 7, 17, 19, 32, 42, 49, 56, 57, 70, 71, 78, 88, 115, 127, 130, 132, 140, 142, 147, 148, 149, 151, 167], "mesh": [4, 7, 17, 19, 35, 49, 56, 70, 71, 78, 81, 88, 115, 130, 147, 148, 167], "amrclaw": [4, 5, 6, 12, 15, 16, 19, 21, 22, 24, 25, 26, 30, 38, 39, 41, 42, 44, 46, 47, 48, 50, 56, 59, 60, 61, 62, 64, 70, 71, 76, 77, 78, 85, 96, 97, 105, 111, 112, 115, 116, 139, 140, 142, 145, 146, 148, 151, 156, 157, 160, 161, 165], "detail": [4, 5, 10, 16, 24, 25, 27, 28, 30, 31, 32, 34, 36, 38, 39, 41, 44, 47, 50, 52, 55, 58, 61, 62, 64, 65, 66, 70, 71, 75, 78, 82, 86, 91, 92, 93, 94, 96, 97, 98, 99, 100, 101, 102, 104, 114, 115, 116, 120, 125, 127, 132, 135, 140, 142, 147, 148, 151, 153, 158, 162, 165, 166, 167, 170], "content": [4, 6, 25, 37, 45, 55, 59, 77, 78, 89, 96, 151, 162, 167, 168], "routin": [4, 5, 6, 16, 18, 19, 22, 27, 29, 32, 34, 38, 39, 47, 48, 49, 50, 55, 56, 66, 71, 72, 76, 77, 78, 81, 84, 86, 89, 91, 94, 97, 100, 101, 104, 106, 107, 115, 118, 119, 120, 123, 125, 127, 128, 130, 140, 144, 148, 150, 152, 158, 164, 165, 167, 168, 170], "special": [4, 7, 16, 48, 50, 55, 65, 78, 86, 97, 115, 135, 142, 164], "depth": [4, 5, 16, 17, 18, 19, 24, 32, 34, 35, 37, 42, 47, 48, 49, 52, 68, 72, 75, 81, 83, 141, 143, 144, 151, 162], "averag": [4, 6, 15, 17, 18, 19, 34, 42, 48, 49, 52, 53, 57, 71, 72, 102, 106, 120, 132, 140, 144, 145, 162, 164, 167], "geophys": [4, 16, 17, 25, 48, 52, 78, 148], "flow": [4, 16, 17, 25, 34, 35, 48, 50, 52, 78, 96, 113, 118, 130, 135, 140, 148, 151, 162, 167], "geoclaw": [4, 7, 12, 17, 18, 19, 25, 26, 30, 31, 32, 34, 35, 36, 37, 39, 41, 44, 46, 47, 56, 57, 59, 60, 61, 62, 63, 64, 68, 70, 72, 75, 77, 78, 81, 85, 96, 105, 111, 113, 114, 116, 139, 140, 141, 143, 144, 146, 148, 149, 154, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167], "parallel": [4, 24, 25, 47, 76, 87, 93, 95, 96, 98, 101, 103, 105, 109, 115, 116, 118, 125, 149], "ten": [4, 78], "thousand": [4, 78], "core": [4, 12, 78, 116, 127, 137], "wish": [4, 13, 14, 15, 24, 31, 38, 39, 52, 55, 62, 71, 80, 81, 96, 101, 104, 105, 107, 111, 113, 115, 125, 145, 153, 156, 157, 165], "discrib": 4, "book": [4, 12, 17, 27, 31, 46, 85, 103, 140], "levequ": [4, 16, 17, 26, 32, 56, 78, 92, 94, 96, 104, 110, 140, 148, 167, 170], "fvmhp": [4, 12, 16, 17, 27, 46, 78, 140, 148, 167, 170], "virtual": [4, 13, 27, 29, 106], "were": [4, 6, 14, 19, 22, 34, 45, 47, 58, 64, 67, 71, 72, 89, 115, 118, 119, 125, 128, 132, 135, 136, 137, 142, 144, 154, 162], "4": [4, 7, 8, 9, 13, 16, 17, 20, 25, 27, 30, 32, 34, 35, 36, 39, 41, 42, 44, 45, 47, 48, 52, 55, 57, 58, 59, 66, 67, 68, 70, 71, 72, 76, 77, 81, 82, 84, 95, 96, 97, 98, 99, 101, 102, 104, 105, 109, 111, 115, 116, 118, 119, 124, 127, 132, 133, 135, 137, 139, 142, 148, 149, 150, 151, 152, 160, 161, 162, 164, 169], "3": [4, 6, 7, 15, 16, 19, 22, 24, 26, 27, 32, 34, 35, 36, 39, 41, 45, 47, 48, 55, 57, 59, 62, 63, 68, 71, 72, 75, 77, 82, 84, 85, 88, 91, 92, 94, 97, 98, 99, 102, 103, 104, 106, 110, 111, 115, 125, 127, 130, 136, 138, 140, 142, 145, 148, 149, 150, 151, 152, 160, 161, 162, 164, 167, 170], "pointer": [4, 16, 18, 19, 58, 75, 81, 84, 104, 109, 123], "code": [4, 5, 6, 7, 8, 12, 14, 16, 21, 22, 23, 24, 25, 26, 29, 31, 34, 35, 36, 37, 38, 39, 41, 43, 44, 45, 47, 48, 49, 52, 54, 56, 57, 58, 60, 65, 66, 67, 68, 74, 75, 76, 77, 78, 80, 82, 84, 85, 86, 88, 89, 94, 96, 97, 98, 99, 101, 104, 105, 108, 110, 111, 114, 117, 118, 119, 120, 123, 124, 125, 126, 127, 128, 129, 130, 132, 137, 139, 140, 141, 142, 146, 148, 149, 150, 151, 152, 153, 158, 160, 161, 162], "bibliographi": [4, 27], "paper": [4, 5, 6, 16, 19, 32, 48, 58, 92, 96], "distribut": [4, 12, 13, 31, 32, 58, 65, 75, 78, 86, 104, 110, 130], "under": [4, 7, 24, 34, 36, 40, 55, 56, 58, 61, 65, 67, 81, 86, 94, 96, 116, 125, 127, 138], "term": [4, 18, 19, 27, 48, 49, 52, 65, 75, 89, 94, 95, 104, 115, 118, 126, 127, 136, 137, 141, 148, 150, 151, 152, 156, 157], "berkelei": [4, 65, 86], "bsd": [4, 65, 86, 127], "contribut": [4, 26, 27, 61, 86, 89, 96, 101, 104, 113, 116], "its": [4, 6, 13, 18, 19, 24, 31, 34, 42, 52, 55, 65, 67, 70, 75, 77, 86, 91, 92, 93, 94, 96, 101, 103, 104, 106, 109, 115, 150, 164, 170], "incept": 4, "1994": [4, 65], "major": [4, 24, 59, 86, 89, 117, 119, 120, 121, 126, 128, 133, 136, 137], "design": [4, 29, 30, 55, 86, 88, 108, 142, 166], "made": [4, 19, 20, 24, 30, 32, 37, 62, 103, 106, 118, 119, 120, 125, 127, 130, 132, 135, 136, 137, 142, 144, 151, 159, 162, 164, 167], "individu": [4, 24, 25, 55, 63, 66, 67, 71, 94, 115, 116, 158], "randal": [4, 17, 96], "univers": [4, 17, 26, 58, 65, 86, 103], "washington": [4, 17, 26, 58, 65, 129, 142, 164], "rjlevequ": [4, 19, 30, 31], "marsha": [4, 6, 17], "berger": [4, 6, 17], "courant": [4, 6, 49, 115, 126, 148, 149, 150, 152], "institut": 4, "nyu": 4, "mjberger": 4, "jan": [4, 59], "olav": 4, "langseth": [4, 17], "norwegian": 4, "defenc": 4, "research": [4, 17, 48, 52, 86, 104, 114], "establish": 4, "david": [4, 17, 86, 96, 104], "georg": [4, 17, 32], "usg": [4, 32, 166], "cascad": 4, "volcano": 4, "observatori": 4, "dlgeorg": 4, "ketcheson": [4, 17, 79, 86, 96, 104], "kaust": [4, 26], "ketch": 4, "kyle": [4, 17, 86, 92, 96, 97, 102], "mandli": [4, 17, 86, 92, 96, 97, 102], "ut": 4, "austin": 4, "contributor": [4, 26, 65, 96], "aron": [4, 17, 86, 96], "ahmadia": [4, 17, 86, 96], "amal": [4, 17, 86, 96], "alghamdi": [4, 17, 86, 96], "ghamdi": 4, "ian": 4, "bollig": 4, "bolliger32": 4, "peter": 4, "blossei": 4, "donna": [4, 17], "calhoun": [4, 17, 55], "donnabois": 4, "ond\u0159ej": 4, "\u010dert\u00edk": 4, "certik": [4, 86], "brisa": 4, "davi": [4, 17], "brisadavi": [4, 128], "gradi": [4, 17, 86], "lemoin": [4, 17, 86], "gradylemoin": 4, "sorin": 4, "mitran": [4, 17], "matteo": [4, 17, 86, 96], "parsani": [4, 17, 86, 96], "mparsani": 4, "xinsheng": [4, 56], "qin": [4, 56], "xinshengqin": [4, 56], "avi": 4, "schwarzschild": 4, "aks2203": 4, "andi": 4, "terrel": 4, "aterrel": 4, "chri": 4, "vogl": 4, "cjvogl": 4, "numer": [4, 17, 55, 110, 128], "student": 4, "toward": [4, 32], "bug": [4, 8, 12, 24, 26, 44, 55, 68, 76, 82, 86, 118, 122, 123, 124, 125, 127, 132, 133, 134, 137], "suggest": [4, 18, 19, 26, 31, 51, 57, 58, 60, 62, 84, 85, 110, 138, 140, 151, 169], "improv": [4, 13, 24, 26, 34, 36, 55, 58, 97, 110, 118, 119, 120, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 148], "explor": [4, 36, 63, 82, 84], "thank": [4, 96], "pleas": [4, 26, 30, 58, 60, 61, 62, 86, 88, 91, 93, 96, 97, 99, 101, 103, 104, 105, 107, 113, 127, 132, 138, 140, 158], "itself": [4, 75, 81, 110, 130, 140, 151, 164], "well": [4, 6, 19, 30, 35, 48, 49, 55, 56, 58, 62, 63, 70, 75, 76, 77, 78, 81, 84, 85, 103, 104, 113, 126, 127, 130, 135, 141, 144, 148, 149, 156, 157, 158, 167, 170], "citat": [4, 19, 59], "similar": [4, 13, 16, 18, 30, 34, 36, 39, 47, 49, 55, 64, 88, 89, 97, 101, 104, 108, 127, 132, 151, 158, 159, 160, 162], "team": [4, 26, 65], "2020": [4, 26, 27, 58, 65, 110, 113, 130, 131, 132, 138, 140], "7": [4, 6, 14, 31, 34, 36, 41, 42, 47, 51, 58, 64, 68, 70, 77, 82, 85, 94, 105, 111, 115, 132, 138, 142, 143, 144, 149, 150], "http": [4, 12, 13, 17, 19, 26, 28, 30, 31, 32, 42, 51, 55, 56, 58, 59, 61, 62, 65, 70, 75, 85, 86, 89, 90, 97, 99, 101, 110, 111, 118, 122, 124, 125, 126, 128, 129, 132, 133, 134, 135, 136, 137, 138, 141, 158, 164], "www": [4, 13, 17, 32, 42, 48, 58, 65, 70, 86, 89, 94, 97, 99, 118, 126, 128, 135, 136, 158, 164], "org": [4, 17, 19, 48, 56, 58, 59, 65, 86, 89, 90, 94, 97, 99, 110, 111, 118, 124, 126, 128, 132, 133, 134, 135, 136, 137, 164], "doi": [4, 17, 56, 59, 61, 118, 130, 131, 132, 133, 134, 135, 136, 137, 138], "10": [4, 17, 18, 19, 30, 32, 34, 36, 42, 49, 55, 56, 57, 59, 82, 88, 91, 94, 115, 124, 125, 127, 130, 131, 132, 133, 134, 135, 136, 137, 138, 142, 148, 149, 150, 152, 154, 162], "5281": [4, 59, 118, 130, 131, 132, 133, 134, 135, 136, 137, 138], "zenodo": [4, 61, 118, 130, 131, 132, 133, 134, 135, 136, 137, 138], "4025432": [4, 131, 138], "here": [4, 13, 16, 18, 19, 31, 36, 41, 42, 52, 59, 62, 63, 70, 78, 82, 84, 88, 91, 96, 97, 99, 101, 102, 107, 108, 111, 113, 115, 123, 140, 141, 142, 159, 164, 170], "bibtex": [4, 59], "misc": [4, 129, 131], "url": [4, 12, 17, 55, 59, 127, 128, 162, 164], "year": [4, 17, 24, 55, 63, 96, 117, 128, 158], "releas": [4, 19, 20, 24, 27, 30, 31, 46, 49, 55, 60, 61, 62, 90, 96, 97, 104, 105, 110], "refer": [4, 5, 19, 22, 32, 34, 35, 36, 38, 39, 41, 48, 50, 55, 59, 66, 67, 71, 75, 88, 92, 94, 97, 98, 102, 104, 106, 111, 113, 127, 129, 139, 140, 142, 151, 158, 162, 164, 166, 167], "particular": [4, 6, 12, 22, 24, 30, 32, 34, 44, 47, 48, 50, 52, 55, 56, 59, 65, 66, 67, 71, 78, 82, 83, 85, 86, 88, 102, 103, 104, 106, 108, 113, 114, 115, 116, 118, 120, 123, 124, 125, 126, 127, 129, 130, 132, 147, 158, 159, 170], "obtain": [4, 6, 12, 34, 46, 47, 49, 50, 52, 62, 63, 72, 97, 98, 99, 115, 118, 132, 140, 144, 153, 162, 170], "your": [4, 6, 15, 16, 18, 19, 21, 22, 26, 27, 28, 36, 38, 40, 44, 47, 57, 58, 59, 60, 61, 62, 76, 81, 82, 84, 86, 87, 88, 89, 90, 93, 95, 96, 97, 98, 107, 108, 110, 111, 112, 113, 115, 116, 119, 127, 137, 140, 145, 146, 156, 157, 162, 165, 167], "multipl": [4, 5, 6, 13, 25, 30, 34, 35, 42, 47, 81, 88, 94, 97, 98, 109, 111, 116, 119, 125, 129, 139, 140, 149, 158, 159], "past": [4, 23, 27, 58, 64, 70, 103, 125, 128, 132, 138, 142, 143, 151], "17605": [4, 59, 138], "osf": [4, 138], "io": [4, 58, 59, 85, 98, 103, 138], "kmw6h": [4, 59, 138], "recent": [4, 13, 24, 29, 32, 49, 54, 58, 61, 66, 68, 76, 82, 84, 85, 118, 124, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 140, 154, 166], "articl": [4, 17, 96, 153], "l": [4, 7, 17, 34, 43, 61, 115, 140, 146, 150], "hadjimichael": [4, 17, 86], "2016": [4, 17, 26, 58], "build": [4, 17, 30, 31, 58, 59, 62, 71, 89, 99, 109, 126, 137, 142], "open": [4, 13, 17, 27, 30, 31, 32, 51, 55, 63, 81, 86, 90, 94, 97, 109, 142, 146, 166, 168], "ecosystem": [4, 17], "pde": [4, 5, 17, 60, 61, 62, 78, 85, 96, 108, 148, 167], "peerj": [4, 17], "scienc": [4, 17, 86], "7717": [4, 17], "c": [4, 16, 17, 30, 31, 32, 44, 55, 63, 65, 82, 86, 88, 89, 94, 102, 107, 108, 140], "68": [4, 17], "mandli2016clawpack": [4, 17], "yianni": [4, 17, 86], "journal": [4, 17, 56, 96, 153], "e68": [4, 17], "publish": [4, 17, 58, 96], "inc": [4, 17, 71], "least": [4, 5, 6, 13, 37, 47, 55, 63, 64, 70, 71, 107, 115, 116, 124, 125, 132, 148, 150, 154, 162, 164], "regard": [4, 41, 124, 158], "click": [4, 12, 13, 20, 30, 55, 58, 59, 116, 118, 126, 135, 136, 137, 138], "link": [4, 11, 13, 15, 17, 20, 21, 22, 26, 27, 30, 34, 36, 44, 45, 48, 55, 56, 57, 58, 59, 61, 63, 110, 111, 112, 118, 126, 135, 136, 137, 138, 140, 141, 143, 145, 152, 156, 157, 162, 166], "classic": [4, 6, 12, 15, 16, 21, 22, 24, 25, 26, 30, 44, 45, 46, 50, 59, 60, 61, 62, 67, 74, 76, 77, 78, 85, 86, 88, 91, 93, 94, 95, 96, 97, 101, 111, 112, 116, 139, 140, 145, 146, 149, 151, 157, 165, 167], "2d": [4, 7, 8, 15, 16, 18, 21, 24, 27, 29, 32, 34, 36, 37, 41, 42, 48, 49, 51, 56, 63, 71, 76, 81, 86, 88, 94, 96, 100, 104, 110, 112, 115, 118, 123, 125, 126, 127, 128, 129, 132, 136, 141, 142, 144, 145, 148, 149, 152, 154, 156, 157, 164, 168, 170], "leveque97": [4, 17], "3d": [4, 7, 15, 19, 24, 32, 71, 76, 81, 86, 96, 100, 104, 112, 115, 118, 119, 121, 123, 124, 125, 128, 136, 140, 142, 145, 148, 149, 156, 157, 168, 170], "langsethleveque00": [4, 17], "amr": [4, 7, 8, 16, 18, 19, 22, 25, 27, 29, 30, 34, 36, 37, 41, 47, 48, 49, 56, 63, 71, 72, 73, 77, 78, 81, 86, 94, 118, 124, 126, 127, 128, 130, 132, 135, 144, 147, 148, 150, 152, 161, 167], "bergerleveque98": [4, 6, 7, 17], "f": [4, 5, 6, 16, 17, 18, 22, 24, 27, 29, 30, 33, 66, 67, 89, 91, 97, 98, 101, 102, 104, 106, 107, 109, 119, 123, 126, 127, 128, 132, 141, 148, 149, 150, 152, 164, 165, 167], "balelevmitross02": [4, 17, 148, 170], "bergergeorgelevequemandli11": [4, 17], "levequegeorgeberg": [4, 17], "order": [4, 5, 6, 13, 16, 17, 18, 19, 31, 32, 34, 36, 47, 52, 57, 62, 64, 67, 70, 71, 72, 75, 77, 78, 82, 84, 85, 86, 88, 91, 92, 94, 96, 97, 98, 100, 101, 104, 108, 109, 110, 111, 115, 118, 123, 127, 132, 136, 140, 142, 144, 147, 148, 149, 150, 152, 158, 162, 164, 165, 167, 170], "sharpclaw": [4, 25, 27, 78, 86, 93, 95, 96, 101, 119, 140], "ketparlev13": [4, 17, 78, 96, 140], "ketchesonmandliet": [4, 17], "support": [4, 8, 13, 18, 19, 24, 36, 37, 41, 44, 49, 52, 55, 60, 61, 73, 75, 77, 85, 86, 88, 89, 94, 97, 98, 100, 102, 104, 115, 118, 123, 125, 126, 127, 128, 132, 133, 135, 136, 140, 142, 148, 149, 151, 158, 159, 162, 165, 168], "part": [4, 5, 19, 24, 26, 32, 36, 48, 51, 52, 62, 63, 64, 86, 89, 99, 105, 106, 108, 110, 114, 116, 118, 129, 167], "nsf": 4, "grant": [4, 86], "dm": 4, "8657319": 4, "9204329": 4, "9303404": 4, "9505021": 4, "96226645": 4, "9803442": 4, "0106511": 4, "cm": [4, 32, 75, 82, 142], "0245206": 4, "0609661": 4, "0914942": 4, "1216732": 4, "ear": 4, "1331412": 4, "cmmi": 4, "1536198": 4, "doe": [4, 5, 11, 16, 19, 22, 29, 30, 36, 42, 43, 49, 52, 55, 57, 58, 62, 71, 78, 82, 85, 94, 103, 106, 109, 115, 116, 120, 125, 129, 132, 135, 139, 140, 141, 144, 158, 164, 165, 167], "de": [4, 17, 86, 96, 142], "fg06": 4, "93er25181": 4, "fg03": 4, "96er25292": 4, "fg02": 4, "88er25053": 4, "92er25139": 4, "00er2592": 4, "fc02": 4, "01er25474": 4, "afosr": 4, "f49620": 4, "94": 4, "0132": 4, "nih": 4, "5r01ar53652": 4, "onr": 4, "n00014": 4, "09": [4, 94, 102, 161], "0649": 4, "council": 4, "nfr": 4, "through": [4, 13, 30, 36, 38, 39, 47, 49, 52, 55, 70, 71, 78, 81, 89, 101, 106, 108, 109, 111, 114, 115], "program": [4, 50, 52, 67, 78], "101039": 4, "420": 4, "scientif": [4, 17, 85, 96, 99, 110, 137], "divis": [4, 55], "nation": [4, 52, 158], "center": [4, 5, 29, 32, 34, 35, 36, 37, 42, 47, 55, 57, 63, 72, 75, 88, 94, 101, 102, 108, 115, 127, 142, 144, 149, 150, 151, 158, 159, 162, 167], "atmospher": 4, "ncar": 4, "boe": 4, "professorship": 4, "founder": 4, "depart": [4, 158], "mathemat": 4, "comot": 4, "fellowship": 4, "king": [4, 86], "abdullah": [4, 86], "technologi": [4, 86], "contract": [4, 65, 86], "state": [4, 13, 17, 19, 27, 30, 58, 75, 82, 88, 89, 91, 94, 96, 97, 98, 99, 101, 102, 103, 104, 107, 108, 116, 132, 133, 140, 141, 142, 148, 162, 170], "emerg": 4, "manag": [4, 12, 13, 55, 98, 158], "tsunami": [4, 5, 16, 17, 19, 26, 27, 34, 36, 42, 48, 50, 56, 68, 75, 98, 115, 119, 122, 128, 129, 135, 142, 143, 144, 151, 159, 162], "hazard": [4, 34, 48, 68, 143], "mitig": [4, 52], "nasa": 4, "asteroid": [4, 19], "threat": 4, "assess": [4, 52, 143], "project": [4, 5, 26, 27, 32, 52, 55, 58, 59, 75, 86, 90, 125, 126, 137, 149, 164], "planetari": 4, "defens": 4, "offic": 4, "opinion": 4, "conclus": [4, 55], "express": [4, 32, 65, 86, 105, 142], "materi": [4, 45, 65, 75, 86, 113, 130], "those": [4, 6, 10, 12, 18, 19, 24, 26, 52, 55, 56, 59, 70, 78, 88, 89, 91, 98, 101, 106, 115, 116, 119, 130, 132, 138, 139, 153, 160, 164, 167], "necessarili": [4, 42, 77, 97, 116], "agenc": [4, 60, 158, 159], "approach": [5, 7, 13, 18, 19, 30, 31, 41, 47, 49, 58, 61, 74, 81, 89, 96, 99, 101, 109, 115, 123, 125, 126, 128, 140, 141, 147, 167, 170], "introduc": [5, 16, 21, 34, 35, 36, 37, 42, 49, 82, 118, 130, 132, 139, 142, 144, 149, 170], "6": [5, 19, 24, 27, 30, 32, 34, 36, 41, 42, 44, 47, 51, 52, 55, 58, 63, 68, 70, 71, 72, 76, 82, 95, 96, 97, 101, 102, 104, 105, 110, 111, 115, 130, 138, 140, 142, 148, 149, 162, 169], "what": [5, 6, 9, 13, 14, 18, 19, 24, 27, 30, 32, 33, 34, 41, 49, 52, 54, 55, 58, 59, 61, 62, 63, 66, 67, 70, 71, 72, 77, 81, 88, 91, 95, 103, 106, 108, 111, 114, 115, 116, 124, 142, 143, 147, 148, 150, 151, 152, 153, 162, 164, 166, 167], "forward": [5, 64, 104, 115, 128, 167], "becaus": [5, 18, 19, 24, 29, 34, 36, 42, 55, 59, 70, 72, 97, 98, 99, 119, 140, 143, 148], "impact": [5, 19, 75], "autonom": 5, "shift": [5, 32, 52, 57], "perform": [5, 6, 17, 24, 29, 52, 55, 57, 76, 78, 81, 82, 91, 94, 97, 101, 104, 109, 116, 129, 132, 139, 140, 146, 151, 160], "snapshot": [5, 30, 98, 128], "save": [5, 13, 27, 28, 35, 36, 37, 42, 54, 63, 77, 91, 95, 104, 124, 125, 127, 132, 139, 159, 164], "space": [5, 6, 7, 16, 17, 27, 32, 34, 35, 36, 37, 47, 48, 51, 55, 57, 75, 77, 94, 98, 101, 115, 118, 123, 135, 139, 142, 148, 149, 150, 151, 152, 162, 164, 167], "interpol": [5, 6, 16, 19, 27, 32, 35, 37, 42, 47, 48, 57, 63, 64, 71, 75, 82, 118, 125, 132, 135, 142, 143, 144, 158, 159, 164], "regrid": [5, 10, 115, 119, 120, 125, 128, 129, 149, 150, 161], "davisleveque2018": [5, 17], "davis2018": [5, 17], "discuss": [5, 18, 19, 26, 30, 32, 52, 57, 70, 75, 97, 108, 110, 111, 115, 118, 125, 127, 140, 151, 154, 170], "when": [5, 14, 15, 16, 19, 22, 30, 31, 32, 34, 36, 37, 42, 43, 44, 47, 49, 53, 54, 55, 57, 58, 59, 61, 62, 64, 68, 70, 71, 75, 76, 77, 78, 81, 82, 84, 88, 95, 96, 97, 99, 100, 104, 107, 111, 115, 116, 118, 119, 120, 122, 124, 125, 126, 130, 132, 134, 135, 136, 140, 142, 143, 144, 145, 147, 148, 149, 150, 151, 152, 153, 158, 162, 164, 165, 166, 167, 168, 170], "accur": [5, 18, 19, 49, 52, 72, 75, 96, 104, 132, 148, 167, 170], "entir": [5, 6, 36, 41, 52, 55, 63, 70, 72, 75, 76, 78, 88, 98, 103, 113, 115, 120, 142, 164], "domain": [5, 6, 16, 17, 35, 36, 41, 42, 49, 52, 55, 58, 63, 75, 77, 87, 88, 89, 91, 99, 101, 103, 106, 113, 115, 118, 135, 149, 150, 151, 152, 162], "dimens": [5, 6, 7, 16, 22, 24, 27, 47, 48, 51, 57, 63, 71, 72, 88, 89, 91, 97, 99, 101, 102, 103, 106, 108, 115, 118, 127, 130, 140, 148, 149, 150, 152, 164, 167], "int_a": 5, "phi": 5, "dx": [5, 15, 17, 32, 34, 35, 36, 51, 57, 64, 75, 77, 89, 94, 98, 123, 127, 145, 162, 164, 167], "leq": [5, 142], "backward": [5, 30, 32, 35, 51, 63, 75, 77, 97, 120, 121, 136, 164], "small": [5, 16, 19, 36, 42, 47, 68, 70, 115, 116, 118, 119, 124, 139, 148, 150, 151, 162, 164, 166], "sai": [5, 13, 16, 30, 63, 107, 115], "x_1": [5, 142], "x_2": [5, 142], "might": [5, 10, 13, 14, 16, 24, 30, 31, 37, 38, 39, 40, 41, 42, 51, 55, 57, 58, 62, 67, 70, 71, 72, 76, 82, 85, 88, 98, 102, 111, 113, 114, 115, 119, 148, 149, 162, 164, 166, 167], "box": [5, 32, 35, 55, 63, 142, 164], "interv": [5, 47, 49, 51, 88, 108, 115, 132, 142, 148, 151], "elsewher": [5, 26, 42, 96, 142], "sharpli": 5, "peak": 5, "gaussian": [5, 88, 108, 152], "final": [5, 32, 37, 44, 58, 64, 71, 75, 88, 91, 98, 108, 113, 119, 139, 141, 148, 150, 152, 164], "necessari": [5, 6, 13, 18, 19, 30, 36, 37, 38, 39, 50, 52, 55, 58, 59, 62, 63, 71, 75, 77, 78, 84, 88, 89, 94, 97, 118, 123, 125, 127, 139, 140, 147, 148, 149, 162, 165, 167], "place": [5, 16, 22, 26, 30, 32, 38, 39, 55, 58, 62, 66, 67, 74, 96, 98, 99, 101, 105, 111, 119, 125, 137, 167], "earlier": [5, 19, 22, 24, 32, 34, 41, 47, 57, 75, 88, 101, 119, 126, 139, 162, 164], "help": [5, 7, 9, 25, 26, 27, 30, 31, 42, 43, 53, 58, 60, 66, 81, 84, 96, 99, 105, 109, 116, 124, 130, 140, 153, 165], "identifi": [5, 38, 39, 42, 55, 70, 89, 115, 130, 158], "hat": 5, "given": [5, 19, 32, 42, 51, 55, 57, 63, 68, 71, 75, 92, 97, 99, 103, 104, 106, 109, 115, 132, 142, 143, 144, 151, 162, 164, 167], "t_r": 5, "reach": [5, 115, 139], "acoustics_1d_adjoint": 5, "acoustics_2d_adjoint": 5, "main": [5, 11, 12, 19, 21, 30, 42, 46, 58, 59, 70, 71, 78, 89, 91, 97, 101, 108, 109, 116, 118, 126, 135], "subdirectori": [5, 12, 22, 24, 25, 38, 39, 58, 59, 62, 66, 74, 84, 93, 98, 111, 116, 135, 147, 151, 153, 160, 164], "must": [5, 6, 13, 16, 18, 19, 22, 24, 30, 32, 34, 36, 42, 46, 49, 50, 55, 58, 61, 65, 66, 67, 70, 71, 75, 76, 77, 86, 89, 96, 97, 98, 101, 103, 104, 106, 107, 108, 109, 111, 115, 119, 123, 140, 142, 143, 144, 148, 149, 150, 151, 152, 158, 164, 165, 166, 167, 170], "makefil": [5, 6, 11, 14, 15, 16, 21, 22, 25, 27, 30, 36, 38, 39, 44, 58, 76, 78, 82, 84, 89, 95, 96, 115, 118, 119, 123, 125, 127, 128, 130, 136, 144, 145, 148, 150, 151, 152, 153, 156, 157, 162, 165, 167], "coeffici": [5, 68, 101, 102, 104, 106, 107, 108, 140, 151], "matric": [5, 140, 170], "transpos": 5, "vice": 5, "versa": 5, "q_t": [5, 101, 102, 104, 108, 167, 170], "q_x": [5, 102, 108, 170], "_x": [5, 42, 70, 102, 104, 164, 167, 170], "eigenvalu": 5, "unchang": [5, 71], "upon": [5, 106], "transform": [5, 44], "eigenvector": [5, 140, 170], "right": [5, 19, 32, 34, 65, 68, 75, 86, 94, 99, 101, 102, 106, 108, 132, 139, 140, 142, 170], "rp1_acoustics_variable_adjoint": 5, "f90": [5, 9, 15, 18, 19, 22, 33, 34, 36, 42, 47, 49, 56, 66, 67, 76, 77, 85, 101, 112, 115, 119, 123, 125, 127, 128, 129, 130, 132, 133, 136, 140, 141, 144, 145, 154, 156, 157, 162, 165, 167], "boundari": [5, 7, 19, 22, 27, 42, 55, 63, 67, 70, 75, 76, 89, 94, 102, 104, 108, 113, 120, 123, 127, 142, 148, 150, 152], "condit": [5, 7, 19, 22, 27, 65, 67, 78, 86, 87, 88, 89, 91, 98, 104, 112, 119, 120, 123, 127, 143, 148, 150, 151, 152], "adjust": [5, 13, 18, 19, 22, 34, 35, 48, 63, 77, 94, 98, 136, 139, 143, 148, 167], "principl": [5, 164, 167], "vanish": 5, "dure": [5, 24, 34, 42, 47, 63, 75, 78, 119, 143, 144, 150, 151, 152, 154, 162], "integr": [5, 24, 57, 64, 86, 96, 98, 104, 119, 120, 124, 150, 152, 161, 162, 167], "qinit": [5, 22, 24, 42, 48, 66, 67, 89, 132, 143, 144, 167], "setrun": [5, 6, 7, 8, 14, 16, 21, 22, 27, 34, 35, 36, 37, 38, 39, 41, 42, 43, 45, 48, 49, 50, 52, 63, 64, 66, 68, 70, 77, 78, 82, 96, 112, 113, 115, 119, 123, 124, 125, 128, 130, 132, 135, 136, 137, 139, 140, 143, 144, 154, 158, 162, 165, 167], "clawdata": [5, 19, 41, 49, 77, 119, 123, 139, 148, 149, 150, 151, 152], "tfinal": [5, 77, 88, 91, 108, 139, 148, 150, 152], "via": [5, 13, 24, 25, 26, 30, 31, 32, 36, 38, 39, 44, 47, 50, 52, 55, 58, 59, 61, 62, 64, 66, 70, 71, 75, 76, 78, 82, 85, 88, 94, 97, 100, 103, 105, 107, 111, 115, 116, 118, 127, 130, 140, 142, 146, 151, 153, 156, 157, 162, 164, 167], "num_output_tim": [5, 77, 88, 91, 98, 139, 148, 150, 152], "larg": [5, 6, 12, 19, 22, 36, 37, 38, 39, 42, 52, 55, 57, 58, 71, 76, 81, 96, 98, 99, 115, 116, 118, 124, 132, 135, 139, 142, 144, 148, 149, 164, 166], "frequent": [5, 22, 29, 36, 47, 64, 107, 124, 135], "enough": [5, 47, 49, 58, 64, 70, 149, 159, 161, 162], "them": [5, 13, 20, 24, 30, 31, 32, 34, 47, 51, 55, 58, 71, 78, 86, 88, 93, 97, 98, 99, 101, 109, 113, 116, 118, 120, 129, 135, 136, 137, 142, 155, 158, 164, 167], "reason": [5, 19, 49, 52, 55, 63, 75, 76, 78, 99, 101, 115, 148], "output_format": [5, 36, 37, 77, 91, 98, 135, 148, 150, 152], "binari": [5, 36, 44, 47, 59, 65, 86, 98, 100, 124, 135, 136, 139, 148, 164, 168], "manner": [5, 36, 42, 47, 55, 64, 70, 75, 81, 127, 144, 148, 156, 157, 162], "attribut": [5, 7, 18, 24, 32, 36, 37, 41, 47, 70, 75, 81, 83, 84, 88, 91, 94, 97, 99, 101, 103, 104, 115, 118, 119, 124, 128, 136, 139, 147, 148, 149, 151, 158, 164], "clawutil": [5, 11, 14, 21, 22, 25, 30, 43, 44, 54, 59, 60, 61, 66, 111, 116, 146, 148, 149, 150, 152, 164, 165], "clawrundata": [5, 47, 63, 128, 139, 148, 149, 150, 152], "adjointdata": [5, 128, 129], "ia": 5, "attribur": 5, "toler": [5, 34, 102, 109, 115, 116, 125, 149, 150, 151], "rundata": [5, 18, 19, 24, 34, 36, 41, 42, 47, 49, 63, 64, 115, 119, 130, 137, 139, 144, 148, 149, 150, 151, 152, 154], "use_adjoint": 5, "adjoint_outdir": 5, "abspath": [5, 41], "_output": [5, 13, 14, 34, 36, 38, 39, 47, 54, 64, 71, 82, 84, 93, 98, 100, 103, 124, 131, 165], "period": [5, 6, 16, 34, 66, 88, 101, 115, 118, 148, 150, 152], "t1": [5, 41, 47, 63, 64, 115, 132, 149, 150, 151], "t0": [5, 18, 19, 77, 139, 148, 150, 151, 152, 162], "t2": [5, 41, 47, 63, 64, 115, 132, 149, 150, 151], "addit": [5, 7, 13, 16, 17, 19, 25, 26, 30, 31, 34, 36, 39, 40, 41, 48, 49, 50, 63, 70, 75, 77, 78, 82, 83, 89, 92, 94, 96, 98, 104, 105, 106, 113, 115, 118, 123, 125, 126, 127, 128, 131, 132, 134, 135, 136, 140, 142, 148, 152, 158, 161, 162, 167, 168], "aux": [5, 6, 15, 22, 24, 29, 47, 57, 89, 96, 97, 98, 101, 103, 104, 106, 107, 119, 120, 125, 127, 140, 141, 145, 148, 149, 150, 151, 152, 167], "inner": [5, 115, 128], "product": [5, 32, 65, 86, 109, 115, 128], "amrdata": [5, 24, 34, 115, 130, 132, 149, 150, 151], "aux_typ": [5, 149, 150], "append": [5, 22, 34, 36, 41, 42, 47, 55, 64, 82, 91, 103, 115, 124, 125, 137, 139, 140, 150, 151], "num_aux": [5, 89, 97, 99, 101, 102, 106, 140, 148, 149, 150, 152, 167], "len": [5, 32, 37, 94, 150, 152, 164], "innerprod_index": 5, "base": [5, 6, 13, 19, 22, 23, 24, 30, 31, 32, 34, 35, 36, 48, 49, 51, 55, 56, 57, 58, 63, 64, 67, 68, 70, 71, 75, 78, 89, 91, 92, 94, 96, 97, 102, 103, 104, 106, 108, 109, 115, 117, 123, 126, 128, 132, 135, 136, 143, 148, 149, 150, 151, 152, 158, 164, 167, 170], "richardson": [5, 7, 24, 149, 150], "error": [5, 16, 22, 38, 39, 43, 55, 62, 71, 76, 82, 91, 96, 97, 98, 109, 115, 116, 128, 132, 137, 149, 150, 158, 165], "estimat": [5, 150], "flag_richardson": [5, 115, 124, 149, 150], "flag_richardson_tol": [5, 115, 149, 150], "1e": [5, 70, 152], "flag2refin": [5, 7, 24, 149, 150], "flag2refine_tol": [5, 115, 149, 150], "01": [5, 17, 42, 77, 94, 164], "we": [5, 6, 18, 19, 24, 26, 28, 34, 38, 39, 41, 42, 47, 52, 55, 57, 58, 59, 60, 62, 67, 70, 72, 75, 81, 84, 88, 89, 90, 91, 93, 94, 97, 98, 99, 100, 101, 104, 105, 106, 107, 108, 109, 110, 113, 116, 127, 130, 135, 137, 140, 141, 142, 164], "attempt": [5, 8, 11, 22, 35, 38, 39, 66, 97, 103, 109, 116, 119, 133, 158, 164, 165], "estim": [5, 68, 115, 149, 151], "step": [5, 6, 10, 16, 18, 19, 21, 30, 34, 36, 38, 39, 40, 47, 55, 58, 59, 64, 71, 77, 78, 81, 84, 86, 87, 88, 89, 91, 98, 101, 104, 106, 108, 113, 115, 118, 119, 124, 125, 135, 139, 140, 146, 148, 149, 150, 151, 152, 162, 170], "extrapol": [5, 7, 16, 24, 72, 101, 108, 127, 148, 149, 150, 152], "togeth": [5, 16, 30, 31, 32, 58, 60, 75, 115, 135], "experiment": [5, 86], "simpli": [5, 13, 19, 36, 38, 39, 40, 42, 47, 49, 55, 57, 66, 67, 70, 72, 88, 90, 91, 93, 98, 99, 105, 116, 118, 140, 142, 153, 158, 164, 167, 168], "magnitud": [5, 32, 115, 127, 151], "greater": [5, 34, 63, 68, 70, 105, 115, 139, 148, 149, 151], "model": [5, 12, 16, 17, 18, 19, 26, 27, 32, 34, 44, 48, 49, 50, 56, 57, 68, 98, 115, 124, 129, 130, 131, 142, 143, 144, 151, 154, 158, 159, 162], "davisleveque2016": [5, 17], "chile2010_adjoint": 5, "shallow": [5, 15, 16, 17, 18, 19, 27, 34, 36, 42, 48, 49, 52, 56, 70, 78, 89, 96, 112, 118, 120, 121, 123, 125, 127, 128, 136, 137, 140, 144, 145, 151, 156, 157, 162, 167], "water": [5, 16, 17, 18, 19, 27, 36, 42, 47, 48, 49, 50, 51, 52, 63, 70, 78, 81, 89, 96, 118, 120, 121, 125, 127, 128, 137, 140, 142, 143, 144, 151, 162, 164, 166, 167], "while": [5, 13, 16, 19, 32, 42, 55, 71, 75, 82, 84, 89, 94, 98, 99, 104, 109, 127, 140, 144, 151, 166], "suitabl": [5, 8, 16, 18, 19, 22, 48, 52, 55, 73, 77, 103, 114, 140, 143, 158, 164], "To": [5, 6, 13, 14, 18, 19, 20, 24, 27, 30, 31, 38, 39, 40, 41, 42, 43, 47, 50, 53, 55, 56, 59, 66, 69, 70, 71, 75, 76, 77, 82, 84, 85, 88, 90, 92, 93, 96, 97, 98, 99, 100, 101, 104, 105, 108, 111, 113, 114, 115, 116, 118, 123, 125, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 139, 143, 146, 148, 149, 153, 162, 168], "date": [5, 17, 30, 43, 51, 55, 58, 59, 66, 82, 158, 165], "across": [5, 115, 125, 162, 164], "ocean": [5, 16, 17, 19, 34, 49, 52, 55, 113, 115, 142, 151, 156, 157, 162], "wai": [5, 6, 13, 16, 19, 28, 30, 36, 38, 39, 41, 42, 47, 49, 55, 57, 58, 61, 62, 63, 65, 66, 82, 84, 85, 86, 88, 91, 93, 94, 99, 101, 103, 105, 108, 110, 111, 113, 114, 119, 125, 126, 127, 130, 137, 138, 140, 142, 147, 148, 155, 159, 162, 167, 169, 170], "target": [5, 62, 82, 89, 101, 130], "possibli": [5, 32, 36, 70, 88, 94, 111, 118, 124, 144], "deep": [5, 49, 70], "amplitud": [5, 125], "compar": [5, 18, 19, 24, 39, 47, 49, 52, 55, 59, 82, 98, 115, 116, 143, 149, 160, 166, 170], "essenti": [5, 57, 71, 104, 151, 162], "rest": [5, 24, 84, 113, 127, 143, 156, 157, 162, 164], "henc": [5, 36, 57, 58, 67, 72, 104, 110, 111, 115, 144], "take": [5, 6, 24, 29, 30, 32, 34, 37, 51, 58, 68, 70, 71, 75, 82, 88, 94, 101, 104, 108, 109, 110, 115, 116, 118, 122, 128, 136, 144, 148, 149, 150, 151, 164, 167, 170], "rpn2_geoclaw_adjoint_qwav": 5, "rpt2_geoclaw_adjoint_qwav": 5, "non": [5, 16, 59, 70, 78, 89, 101, 108, 128, 130, 148, 150, 152, 158, 170], "vector": [5, 24, 88, 92, 98, 106, 127, 135, 140, 141], "split": [5, 6, 76, 94, 97, 104, 123, 124, 132, 148, 149, 150, 152, 161, 167, 170], "flux": [5, 17, 34, 36, 37, 94, 102, 104, 140, 148, 170], "comment": [5, 11, 19, 26, 53, 59, 126, 135, 139], "rpn2": [5, 140], "basic": [6, 10, 12, 27, 32, 38, 40, 48, 61, 70, 71, 88, 94, 96, 97, 98, 102, 104, 116, 140, 141, 158, 170], "strategi": 6, "logic": [6, 16, 17, 34, 132, 151], "rectangular": [6, 7, 16, 17, 32, 34, 37, 41, 42, 48, 50, 63, 70, 94, 115, 127, 130, 135, 149, 151, 162], "too": [6, 19, 51, 55, 58, 59, 118, 124, 142, 150, 152, 154], "portion": [6, 36, 42, 55, 70, 89, 135, 161], "factor": [6, 55, 149, 151, 161, 164], "direct": [6, 8, 16, 24, 32, 34, 36, 38, 39, 47, 49, 51, 55, 59, 63, 65, 66, 71, 75, 76, 82, 86, 91, 101, 108, 115, 126, 140, 148, 149, 151, 164], "anisotrop": [6, 24], "perhap": [6, 12, 19, 34, 42, 47, 58, 82, 106, 109, 115, 142], "section": [6, 13, 16, 36, 38, 39, 42, 44, 49, 50, 52, 58, 59, 67, 71, 81, 84, 96, 116, 132, 139, 148, 151, 164], "cfl": [6, 49, 94, 98, 104, 108, 118, 119, 124, 148, 150, 151, 152], "spatial": [6, 17, 27, 32, 36, 37, 41, 42, 47, 48, 49, 64, 68, 72, 101, 115, 119, 123, 130, 132, 140, 143, 149, 150, 151, 152, 170], "reduc": [6, 16, 36, 42, 49, 55, 118, 124, 126, 135, 170], "thu": [6, 51, 98, 101, 127, 158], "proce": [6, 18, 19, 30, 151], "advanc": [6, 17, 36, 56, 70, 76, 108, 124, 136, 148, 149, 167], "taken": [6, 34, 70, 75, 98, 104, 115, 148, 167], "around": [6, 32, 34, 42, 63, 97, 113, 116, 130, 149, 150, 158, 164, 167], "librari": [6, 13, 15, 16, 18, 19, 22, 24, 27, 29, 30, 34, 36, 38, 39, 44, 47, 49, 56, 63, 66, 76, 77, 78, 86, 92, 97, 99, 104, 109, 111, 112, 115, 125, 130, 144, 145, 149, 156, 157, 165, 167], "bcnamr": [6, 16, 127, 148, 150, 167], "check": [6, 14, 15, 16, 22, 34, 38, 39, 43, 44, 54, 55, 56, 58, 59, 60, 62, 66, 71, 82, 85, 88, 89, 91, 96, 99, 103, 104, 106, 108, 109, 111, 112, 115, 120, 129, 142, 144, 145, 149, 150, 156, 157, 158, 164, 165, 166, 167], "denot": [6, 19, 24, 37, 47, 57, 140, 164], "procedur": [6, 16, 42, 48, 49, 59, 167], "updat": [6, 12, 13, 24, 25, 27, 34, 53, 56, 61, 62, 64, 84, 96, 104, 106, 107, 110, 113, 118, 119, 123, 125, 126, 127, 128, 129, 130, 140, 149, 150, 152, 155, 158, 161, 167], "consist": [6, 27, 34, 36, 51, 55, 59, 63, 99, 110, 125, 135, 136, 140, 142, 151, 162, 167], "replac": [6, 13, 31, 36, 41, 47, 52, 56, 58, 59, 61, 64, 66, 81, 89, 93, 97, 99, 100, 101, 102, 106, 109, 116, 118, 119, 125, 127, 129, 130, 135, 139, 140, 144, 164, 165], "ly": [6, 70], "within": [6, 16, 30, 36, 37, 58, 62, 70, 72, 78, 82, 100, 109, 111, 115, 140, 142, 147, 153, 164], "approxim": [6, 16, 18, 19, 27, 35, 52, 55, 72, 75, 140], "lead": [6, 13, 24, 34, 36, 52, 55, 68, 71, 75, 111, 114, 132, 144, 149], "total": [6, 32, 36, 55, 75, 77, 98, 104, 148, 149, 150, 152, 161], "mass": [6, 98, 118, 154], "restor": 6, "global": [6, 14, 94, 106, 109, 118, 143, 162, 166, 167], "fix": [6, 21, 22, 24, 27, 35, 37, 41, 47, 48, 49, 58, 59, 63, 64, 66, 70, 72, 86, 97, 102, 118, 119, 120, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 141, 148, 150, 152, 164], "up": [6, 13, 19, 24, 30, 31, 32, 34, 36, 38, 39, 42, 43, 47, 48, 55, 58, 59, 63, 66, 70, 71, 75, 77, 82, 88, 89, 91, 93, 95, 96, 97, 99, 104, 105, 108, 111, 113, 115, 116, 118, 123, 124, 127, 130, 132, 137, 142, 144, 147, 150, 152, 161, 162, 165, 166], "style": [6, 24, 30, 32, 36, 41, 53, 55, 70, 73, 82, 86, 91, 127, 151], "olig": [6, 17], "colella": [6, 17], "bergeroliger84": [6, 17], "bergercolella89": [6, 17], "fortran": [6, 9, 11, 13, 14, 19, 22, 25, 29, 30, 32, 34, 35, 36, 37, 38, 47, 48, 50, 57, 60, 62, 66, 67, 68, 72, 76, 77, 78, 81, 84, 86, 88, 89, 91, 94, 96, 97, 99, 101, 102, 104, 105, 106, 109, 111, 118, 123, 124, 125, 127, 128, 129, 135, 136, 140, 141, 146, 149, 150, 151, 152, 158, 160, 161, 162], "written": [6, 11, 27, 32, 34, 36, 37, 43, 47, 62, 63, 64, 65, 75, 77, 78, 82, 86, 95, 96, 97, 101, 125, 140, 148, 149, 150, 151, 152, 158, 164, 167], "ga": [6, 102], "dynam": [6, 22, 32, 36, 52, 75, 78, 149], "merg": [6, 13, 27, 30, 56, 58, 59, 62, 123], "earli": [6, 22, 144], "mjb": [6, 17], "rjl": [6, 17, 111, 129], "fulli": [6, 52, 55, 56, 126, 130, 140, 151, 158, 159], "consid": [6, 42, 52, 62, 70, 89, 111, 146, 153, 164], "adjac": [6, 16, 34, 48, 115, 144, 148], "equival": [6, 47, 56, 57, 63, 64, 77, 129, 135, 162], "copi": [6, 14, 15, 16, 19, 38, 39, 47, 55, 58, 59, 62, 71, 88, 91, 101, 106, 112, 113, 114, 115, 120, 124, 127, 131, 144, 145, 149, 153, 156, 157, 162, 167], "interior": [6, 16, 42, 77, 106], "howev": [6, 13, 16, 18, 19, 24, 34, 38, 39, 42, 44, 49, 50, 52, 55, 62, 65, 67, 70, 72, 75, 76, 77, 86, 89, 96, 115, 116, 125, 127, 129, 143, 144, 147, 151, 161], "lie": [6, 34, 35, 37, 70, 72, 115, 130, 142], "outsid": [6, 16, 41, 63, 70, 130, 142, 144, 162, 164], "li": [6, 16, 34, 37, 72, 115, 142], "along": [6, 14, 16, 19, 26, 29, 32, 34, 42, 47, 55, 58, 61, 75, 77, 111, 115, 118, 123, 138, 139, 142, 144, 151, 166], "unless": [6, 34, 43, 44, 63, 102, 110, 143, 148, 149, 164], "standard": [6, 16, 19, 32, 34, 36, 49, 55, 57, 71, 77, 89, 92, 104, 111, 115, 116, 150, 151, 152, 153, 162, 167, 170], "beyond": [6, 32, 110, 127], "modifi": [6, 9, 14, 15, 16, 18, 19, 22, 24, 29, 34, 38, 39, 42, 47, 48, 58, 59, 62, 64, 66, 71, 74, 82, 89, 92, 94, 96, 101, 111, 112, 113, 114, 115, 122, 124, 125, 126, 127, 132, 142, 144, 145, 148, 150, 151, 152, 156, 157, 162, 164, 167], "damag": [6, 65, 86], "bcn": [6, 16, 152, 167], "nd": [6, 16, 115, 127, 130, 167], "actual": [6, 29, 32, 36, 57, 62, 63, 71, 75, 82, 92, 97, 109, 113, 143, 151], "softwar": [6, 13, 26, 27, 31, 48, 52, 65, 86, 96, 97, 98, 153, 162], "With": [6, 24, 30, 47, 51, 53, 55, 62, 70, 78, 115, 124, 140, 142, 148], "opposit": [6, 16, 97], "side": [6, 16, 19, 20, 34, 55, 58, 68, 75, 97, 116, 118, 135, 136, 137, 140, 170], "everi": [6, 12, 30, 34, 36, 47, 64, 66, 67, 77, 88, 91, 93, 97, 98, 106, 115, 116, 118, 125, 126, 140, 144, 146, 148, 150, 152, 158, 162, 164, 167], "few": [6, 12, 13, 19, 24, 28, 30, 31, 39, 49, 52, 58, 70, 71, 89, 104, 108, 110, 115, 116, 130, 143, 160, 162, 167], "coarsest": [6, 19, 36, 55, 77, 119, 139, 148], "revis": [6, 125], "shock": [6, 17, 52, 104, 115], "accord": [6, 57, 97], "criteria": [6, 7, 24, 27, 34, 70, 106], "cluster": [6, 17, 115, 149, 150], "rigoutsi": 6, "bergerrigoutsis91": [6, 17], "nonoverlap": 6, "rectangl": [6, 7, 27, 32, 36, 70, 75, 115, 130, 164], "balanc": [6, 17, 78, 126, 141, 156, 157], "conflict": [6, 30, 62, 66, 71, 107, 111], "goal": 6, "possibl": [6, 13, 24, 28, 30, 32, 34, 36, 37, 47, 49, 51, 52, 55, 64, 65, 66, 75, 82, 86, 94, 97, 99, 100, 104, 109, 111, 115, 140, 142, 143, 148, 149, 162, 166, 167], "minim": [6, 62, 70, 97, 142, 149, 164], "overhead": [6, 76, 115, 161], "cutoff": [6, 150], "control": [6, 7, 25, 27, 34, 36, 44, 47, 58, 62, 64, 71, 77, 84, 87, 92, 94, 96, 97, 98, 99, 101, 115, 125, 130, 141, 151], "fraction": [6, 13, 32, 115, 148, 167, 170], "70": [6, 36, 55], "realli": [6, 72, 116, 167], "At": [6, 13, 29, 30, 36, 38, 39, 42, 70, 99, 104, 108, 110, 115, 130, 148], "present": [6, 26, 63, 72, 94, 97, 102, 103, 104, 109, 153, 154, 167, 170], "previous": [6, 24, 34, 70, 77, 84, 118, 123, 130, 144], "bilinear": [6, 34, 42, 47, 57, 72, 119, 120, 162], "doxygen": [6, 7, 27, 126], "flowchart": [6, 7, 27], "capabl": [7, 12, 19, 24, 34, 36, 47, 52, 56, 64, 70, 78, 89, 96, 119, 124, 125, 127, 128, 129, 130, 131, 135, 136, 164, 166], "block": [7, 32, 35, 42, 63, 75, 77, 78, 88, 97, 106, 109, 116, 167], "structur": [7, 10, 24, 34, 36, 37, 41, 59, 62, 66, 78, 103, 104, 125, 142, 147, 164], "input": [7, 14, 16, 22, 25, 27, 29, 32, 35, 37, 43, 48, 55, 63, 67, 70, 71, 77, 88, 91, 92, 94, 96, 102, 103, 104, 109, 113, 124, 127, 128, 129, 140, 150, 151, 152, 158, 159, 162, 164, 167], "indic": [7, 16, 19, 22, 24, 27, 31, 32, 34, 36, 41, 42, 44, 47, 48, 55, 57, 59, 62, 67, 71, 72, 80, 84, 94, 98, 99, 102, 104, 108, 111, 115, 116, 125, 130, 132, 140, 141, 148, 149, 150, 151, 152, 154, 162, 164, 167], "tool": [7, 8, 17, 24, 25, 30, 32, 34, 35, 36, 37, 38, 39, 42, 48, 49, 50, 51, 52, 55, 57, 60, 61, 62, 63, 71, 75, 80, 81, 82, 83, 85, 96, 111, 114, 120, 121, 125, 126, 130, 131, 151, 153, 162, 164, 166, 168], "matlab": [7, 24, 27, 38, 39, 80, 81, 82, 100, 110, 118, 127, 130, 131], "deprec": [7, 32, 48, 58, 62, 118, 123, 127, 135, 137, 162, 164], "debug": [7, 18, 44, 66, 77, 81, 98, 106, 111, 116, 135, 148, 150], "flag": [7, 12, 13, 18, 24, 27, 30, 31, 41, 43, 44, 48, 56, 62, 76, 89, 107, 109, 111, 118, 123, 128, 132, 150, 151], "sampl": [7, 8, 14, 17, 18, 27, 31, 36, 44, 47, 48, 51, 55, 64, 75, 111, 116, 135, 139, 142, 148, 149, 162, 164, 167], "ghost": [7, 16, 19, 76, 77, 94, 97, 104, 106, 125, 132, 136, 148, 150, 152, 161, 167, 170], "flagregion": [7, 27, 70, 115, 130, 132, 142, 149, 151], "rule": [7, 13, 27, 63, 70, 89], "convex": [7, 34], "slu": 7, "bounding_box": [7, 35], "mask_outsid": [7, 70], "write": [7, 30, 32, 35, 36, 37, 41, 42, 47, 48, 54, 57, 58, 68, 75, 77, 78, 81, 88, 91, 94, 95, 97, 98, 99, 103, 118, 125, 127, 150, 152, 158, 162, 164], "instanti": [7, 91, 99, 101, 104, 106, 136, 150, 152], "make_kml": 7, "simpl": [7, 31, 38, 39, 41, 48, 59, 72, 75, 89, 96, 101, 102, 104, 109, 114, 116, 164], "select": [7, 12, 13, 15, 16, 30, 34, 42, 70, 97, 98, 104, 112, 115, 119, 126, 130, 138, 145, 148, 151, 156, 157, 166], "continent": [7, 70], "shelf": [7, 70], "guid": [7, 13, 17, 20, 25, 26, 27, 48, 50, 56, 61, 96, 110, 115, 118, 126, 130, 135, 136, 137, 155], "adjoint": [7, 17, 27, 56, 115, 127, 128], "gaug": [7, 27, 34, 36, 48, 49, 63, 72, 94, 95, 106, 113, 119, 123, 124, 125, 126, 127, 130, 135, 139, 143, 147, 150], "extend": [8, 16, 24, 42, 63, 70, 71, 94, 127, 142, 144, 151, 162, 164, 170], "directli": [8, 18, 19, 21, 25, 34, 48, 52, 61, 71, 75, 82, 84, 88, 89, 92, 96, 106, 109, 111, 127, 135, 164, 168], "obviou": [8, 55], "elimin": [8, 24, 70, 89, 111, 127, 151], "gallery_classic_amrclaw": 8, "num_cel": [8, 24, 49, 94, 140, 148, 149, 150, 152], "refinement_ratios_i": [8, 149, 150], "sweep": [8, 140], "transvers": [8, 94, 125, 132, 140, 141, 148, 167, 170], "graph": 9, "understand": [9, 27, 38, 39, 52, 81, 96, 108, 115, 140], "filpatch": [9, 42, 125, 129, 132], "idea": [10, 26, 32, 70, 71, 78, 88, 108, 120, 164, 170], "overal": [10, 88], "who": [10, 12, 21, 24, 26, 34, 44, 52, 60, 118], "gori": 10, "monster": 10, "column": [10, 32, 34, 47, 49, 52, 64, 98, 102, 123, 142, 164], "markup": 11, "languag": [11, 81, 109], "restructur": [11, 58], "text": [11, 58, 59, 63, 77, 91, 97, 104, 123], "sphinx": [11, 25, 27, 59, 126], "covert": 11, "convert_readm": 11, "brows": [11, 26, 45, 55, 71, 153, 167], "insert": [11, 16, 75, 97, 118, 146], "script": [11, 21, 22, 30, 32, 34, 36, 43, 47, 55, 58, 66, 71, 78, 81, 86, 89, 93, 95, 96, 98, 99, 104, 109, 111, 116, 127, 131, 140, 147, 151, 152, 164], "invok": [11, 14, 19, 76, 144, 165], "minor": [11, 19, 55, 58, 98, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 130, 132, 134, 136, 137], "syntax": [11, 61, 146], "highlight": [11, 13], "header": [11, 32, 34, 36, 42, 47, 57, 70, 75, 77, 97, 103, 123, 125, 127, 158, 162, 164], "complex": [12, 19, 36, 41, 94], "archiv": [12, 23, 39, 55, 59, 116, 153, 160, 164, 166], "github": [12, 15, 19, 24, 25, 26, 27, 28, 31, 56, 58, 61, 62, 93, 101, 105, 112, 116, 118, 122, 124, 125, 126, 135, 138, 140, 141, 145, 156, 157, 165], "app": [12, 13, 20, 25, 28, 30, 31, 40, 45, 46, 75, 113, 114, 118, 122, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 141], "com": [12, 13, 19, 25, 26, 28, 30, 31, 51, 56, 58, 59, 61, 62, 97, 99, 101, 105, 122, 124, 125, 126, 135, 138, 141], "fvmbook": [12, 17, 45, 46], "galleri": [12, 17, 27, 34, 36, 38, 39, 40, 45, 48, 49, 59, 80, 81, 93, 96, 110, 116, 122, 126, 153, 160, 167], "anim": [12, 16, 36, 45, 49, 55, 123, 130, 131, 135, 153], "instal": [12, 13, 19, 20, 25, 27, 31, 38, 46, 55, 58, 59, 84, 86, 87, 90, 95, 97, 108, 110, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 146, 169], "collect": [12, 27, 28, 30, 32, 34, 75, 81, 88, 104, 153], "either": [12, 16, 19, 22, 32, 34, 36, 42, 48, 50, 55, 64, 66, 70, 71, 75, 77, 82, 84, 88, 94, 96, 97, 98, 104, 109, 111, 115, 116, 123, 124, 125, 127, 135, 140, 142, 144, 149, 151, 158, 162, 164, 167, 170], "clone": [12, 20, 25, 26, 45, 56, 58, 59, 62, 85, 99, 105, 114, 118, 135, 136, 137, 165], "git": [12, 13, 25, 26, 27, 28, 56, 59, 62, 96, 105, 116, 129], "navig": [12, 31, 58, 153], "green": [12, 18, 19, 63, 70, 75, 82, 116, 164], "button": [12, 13, 30, 55, 63, 126], "download": [12, 13, 30, 31, 32, 39, 40, 42, 48, 55, 59, 61, 62, 93, 99, 105, 127, 128, 138, 160, 164, 165, 166], "zip": [12, 55, 59], "illustr": [12, 27, 32, 34, 38, 46, 48, 49, 55, 70, 71, 75, 77, 114, 122, 123, 127, 129, 140, 142, 153, 154, 164], "variou": [12, 19, 22, 24, 32, 36, 41, 46, 52, 58, 71, 72, 75, 82, 84, 94, 108, 110, 111, 115, 125, 140, 147, 151, 154, 158], "visibl": [12, 13, 46, 55, 114, 153], "render": [12, 24, 34, 46, 55, 63, 168], "advantag": [12, 19, 36, 47, 64, 81, 97, 110, 116, 142], "independ": [12, 25, 32, 36, 37], "contact": [12, 93, 96, 105], "u": [12, 13, 16, 26, 31, 34, 36, 37, 51, 52, 59, 60, 62, 64, 86, 93, 96, 102, 105, 106, 107, 108, 113, 126, 140, 149, 152, 158, 166], "storm": [12, 17, 26, 27, 48, 123, 126, 127, 128, 129, 131, 132, 133], "surg": [12, 17, 26, 27, 48, 123, 126, 127, 128, 129, 132, 158], "empti": [12, 36, 47, 103, 106, 109, 111, 118, 148, 151, 158, 164], "gitmodul": 12, "pull": [12, 26, 28, 31, 58, 59, 61, 93, 101, 116, 122, 125, 126, 132, 135, 140], "request": [12, 26, 28, 32, 36, 37, 47, 58, 61, 77, 88, 93, 94, 98, 101, 103, 116, 118, 125, 127, 132, 140, 151, 158, 164], "init": [12, 27, 30, 42, 48, 56, 59, 61, 143, 151], "leav": [12, 13, 16, 47, 62, 149, 164], "off": [12, 13, 47, 52, 55, 63, 71, 84, 91, 98, 115, 135, 149, 164], "won": [12, 13, 70, 89, 164], "hurt": [12, 67], "maintain": [12, 30, 110, 127, 149, 162, 167], "flavor": [12, 23, 97], "demonstr": [12, 27, 93, 99], "agre": [12, 30, 42, 57, 140, 161, 164, 167], "seen": [12, 24, 34, 38, 39, 40, 52, 76, 101, 148, 153], "cloud": 13, "elast": [13, 75], "sign": [13, 26, 82, 132, 158], "account": [13, 26, 30, 59, 90, 99, 139], "750": 13, "free": [13, 55, 66, 75, 86, 90, 101, 105, 107], "micro": 13, "suffici": [13, 16, 18, 19, 22, 36, 47, 75, 76, 77, 113, 119, 135, 148, 151], "tier": 13, "inform": [13, 14, 24, 27, 34, 35, 37, 38, 39, 49, 50, 51, 52, 53, 54, 62, 67, 77, 82, 83, 84, 88, 89, 94, 96, 98, 99, 100, 102, 103, 109, 111, 124, 127, 128, 130, 136, 138, 139, 140, 143, 146, 148, 149, 151, 158, 161, 162, 165, 166, 167, 168], "uw": [13, 26], "escienc": 13, "aw": 13, "tutori": [13, 31, 59, 84, 87, 91, 96, 105, 111, 114], "gear": 13, "faq": [13, 27, 81], "price": 13, "charg": 13, "per": [13, 32, 37, 47, 49, 55, 63, 71, 76, 97, 149], "thereof": 13, "regardless": [13, 37, 42, 70, 115, 148], "cpu": [13, 56, 124, 127, 129, 161], "consol": [13, 98, 151], "tab": [13, 58, 138], "east": [13, 162], "cheaper": 13, "rate": 13, "menu": [13, 20, 27, 58, 63, 118, 126, 135, 136, 137, 138, 143, 166], "imag": [13, 38, 39, 42, 59, 63, 70, 116, 127, 142], "platform": [13, 55, 91, 99, 110, 116], "finish": [13, 82, 88], "load": [13, 63, 98, 100, 103, 109, 116, 164, 168], "databas": [13, 32, 75, 109, 113, 127, 162], "uwamath": 13, "bar": [13, 58, 158], "screen": [13, 30, 55, 63, 91, 98, 99, 124, 150, 152], "shapshot": 13, "machin": [13, 27, 76, 78, 116, 125, 146], "disk": [13, 47, 88, 97, 98, 116, 125], "ubuntu": 13, "linux": [13, 74, 85, 107, 116, 146], "popup": 13, "look": [13, 14, 24, 27, 30, 32, 42, 55, 58, 59, 63, 71, 82, 84, 89, 94, 99, 103, 104, 108, 109, 111, 116, 120, 127, 136, 142, 148, 149, 151, 161, 164, 165], "sort": [13, 42, 127, 147, 165], "larger": [13, 22, 34, 49, 55, 63, 75, 76, 77, 82, 94, 119, 125, 132, 149, 151, 162], "cost": [13, 104], "continu": [13, 24, 30, 32, 51, 53, 58, 86, 110, 118, 140, 148, 170], "eventu": [13, 48, 130], "don": [13, 29, 30, 58, 59, 82, 97, 98, 99, 105, 116, 150, 165], "pair": [13, 51, 97, 116, 164], "secur": 13, "quick": [13, 27, 39, 48, 50, 60, 85, 116, 160], "close": [13, 42, 55, 58, 63, 70, 71, 97, 115, 118, 130, 149, 158], "back": [13, 29, 31, 58, 59, 126], "statu": [13, 30, 54, 91, 108], "wait": 13, "until": [13, 34, 64, 70, 137, 144], "refresh": [13, 47], "bottom": [13, 15, 19, 32, 38, 39, 48, 52, 68, 70, 75, 88, 101, 102, 125, 126, 145, 156, 157], "scroll": 13, "down": [13, 32, 98, 124, 158, 162, 164], "dn": 13, "screenshot": [13, 55], "rjlkei": 13, "pem": 13, "abl": [13, 58, 111], "ssh": [13, 30], "keypair": 13, "50": [13, 17, 34, 51, 55, 72, 104, 120, 150], "19": [13, 17, 26, 133, 134, 138, 161], "75": [13, 17, 92, 108, 142], "229": 13, "amazonaw": 13, "gfortran": [13, 62, 76, 85, 87, 107, 118, 146, 165], "ipython": [13, 78, 82, 84, 89, 90, 96, 98, 105, 108, 111, 123, 124], "scipi": [13, 37, 89, 110, 137, 158, 164], "netcdf": [13, 37, 44, 48, 124, 127, 129, 131, 158, 164, 166], "apach": 13, "server": [13, 31, 42, 55, 58, 59, 70, 127, 162, 166], "apt": [13, 85], "fetch": [13, 51], "bring": [13, 55, 58, 71, 151], "master": [13, 15, 27, 31, 58, 59, 62, 101, 112, 118, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 141, 145, 156, 157], "make_lib": 13, "compil": [13, 18, 19, 27, 38, 39, 43, 50, 62, 67, 76, 78, 84, 85, 89, 96, 97, 101, 105, 109, 118, 119, 140, 141, 146], "bashrc": [13, 44, 107, 146], "Of": [13, 28, 75, 108, 113, 162], "cours": [13, 28, 34, 47, 50, 64, 75, 99, 100, 108, 110, 113, 151, 162], "tar": [13, 129, 138], "instruct": [13, 19, 20, 26, 27, 38, 39, 42, 55, 56, 58, 59, 88, 90, 96, 99, 105, 108, 111, 118, 126, 133, 135, 136, 137, 138, 139, 165], "window": [13, 32, 71, 84, 146], "respons": [13, 52, 88, 103], "pretti": 13, "slow": [13, 55, 98, 107], "_plot": [13, 38, 39, 47, 71, 84, 118, 147, 153], "local": [13, 17, 19, 22, 27, 30, 55, 58, 63, 66, 67, 71, 92, 94, 101, 106, 125, 127, 136, 144, 162, 164, 167], "sftp": 13, "much": [13, 19, 30, 34, 36, 44, 49, 55, 77, 78, 81, 85, 110, 115, 119, 123, 130, 135, 136, 142, 148, 151, 161, 164], "smaller": [13, 36, 55, 68, 78, 94, 98, 119, 135, 144, 148, 150, 151, 152, 164], "quicker": [13, 142], "browser": [13, 30, 31, 38, 39, 55, 58, 153], "explain": [13, 19, 34, 52, 70, 132, 148, 153], "webserv": 13, "inbound": 13, "port": [13, 31, 95, 96, 101, 149], "22": [13, 26, 149, 164], "80": [13, 17, 55, 99, 142], "drop": [13, 18, 19, 58, 85, 130, 132, 144, 148], "tcp": 13, "Then": [13, 16, 30, 31, 32, 36, 47, 58, 59, 60, 67, 70, 75, 76, 84, 88, 91, 99, 105, 106, 107, 111, 118, 140, 142, 164, 165], "someth": [13, 29, 30, 58, 66, 74, 81, 98, 103, 104, 111, 118, 162, 165, 167], "shot": 13, "ln": 13, "expos": [13, 78], "home": [13, 31, 32, 62, 146], "scp": 13, "TO": [13, 65, 86], "send": [13, 26, 101, 140], "remot": [13, 55, 59, 127, 164, 166], "rel": [13, 18, 19, 22, 32, 43, 50, 52, 55, 75, 76, 82, 96, 109, 111, 116, 118, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 143, 149, 151, 153, 162, 166], "end": [13, 31, 32, 34, 35, 36, 47, 51, 55, 59, 63, 91, 98, 102, 108, 110, 113, 115, 118, 124, 125, 127, 139, 141, 142, 150, 152, 158, 161], "retriev": [13, 37, 51, 84, 89, 104, 164, 166], "sit": 13, "idl": 13, "action": [13, 14, 89], "restart": [13, 27, 47, 77, 84, 96, 118, 124, 125, 126, 127, 129, 132, 136, 148, 150, 152], "later": [13, 36, 37, 42, 54, 55, 62, 84, 104, 139], "But": [13, 19, 34, 42, 55, 72, 82, 107, 120, 127, 144, 146], "futur": [13, 24, 27, 28, 38, 39, 42, 49, 52, 57, 63, 68, 88, 104, 110, 124, 125, 127, 130, 136, 149, 158, 162], "job": [13, 134], "eb": 13, "runclaw": [14, 54, 118, 120, 129, 131, 137, 140], "autom": [14, 58, 89, 116], "certain": [14, 34, 48, 61, 70, 98, 115, 124, 142, 148], "keep": [14, 27, 30, 34, 35, 37, 38, 39, 76, 88, 91, 96, 106, 109, 116, 120], "log": [14, 27, 30, 31, 94, 95, 96, 103, 104], "came": 14, "rundir": [14, 91], "environ": [14, 18, 19, 27, 30, 38, 39, 40, 43, 54, 55, 58, 61, 62, 71, 74, 76, 78, 100, 107, 109, 111, 125, 164, 165], "noth": [15, 64, 106, 128, 145, 156, 157, 164, 167], "rememb": [15, 29, 76, 82, 99, 145, 156, 157], "b4step1": [15, 67, 167], "b4step2": [15, 145, 167], "b4step3": 15, "branch": [15, 20, 27, 31, 44, 54, 56, 59, 61, 62, 112, 116, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 145, 156, 157], "tag": [15, 55, 59, 61, 112, 145, 149, 150, 156, 157], "bathymetri": [15, 48, 52, 55, 63, 102, 113, 125, 127, 141, 143, 145, 151, 162, 164], "area": [15, 24, 48, 104, 113, 125, 144, 145], "dy": [15, 51, 57, 63, 64, 77, 89, 94, 98, 123, 127, 145, 162, 164], "capac": [15, 102, 145, 148, 149, 150, 152], "length": [15, 32, 37, 49, 52, 63, 75, 101, 106, 125, 132, 145, 148, 149, 150, 151, 167], "latter": [15, 18, 47, 70, 72, 101, 130, 142, 145, 148, 158, 167], "quantiti": [15, 18, 19, 34, 37, 63, 71, 72, 91, 95, 96, 102, 106, 141, 145, 151], "coordinate_system": [15, 18, 49, 64, 145, 151], "impos": [16, 89, 115, 156, 157, 170], "chapter": [16, 140, 148, 167], "choic": [16, 48, 81, 104, 148, 150, 151, 152, 167], "bc_lower": [16, 88, 101, 108, 148, 150, 152], "bc_upper": [16, 88, 101, 108, 148, 150, 152], "extrap": [16, 101, 108, 148, 150], "outflow": [16, 148, 150, 152], "move": [16, 34, 38, 39, 48, 58, 62, 64, 75, 101, 115, 119, 121, 126, 151, 154, 162, 163], "normal": [16, 19, 35, 36, 56, 58, 64, 82, 101, 111, 140, 141, 148, 149, 150, 151, 152], "fairli": [16, 52, 125], "good": [16, 19, 30, 52, 55, 65, 76, 86, 108, 113, 116, 125, 132, 140], "outgo": 16, "let": [16, 48, 62, 86, 113, 126, 132, 140], "without": [16, 24, 35, 43, 47, 52, 63, 65, 66, 67, 70, 71, 82, 84, 86, 92, 96, 97, 98, 109, 111, 116, 136, 142, 146, 150, 152, 158, 165, 167], "particularli": [16, 19, 29, 31, 34, 36, 54, 55, 60, 61, 62, 75, 77, 111, 120, 123, 127, 132, 136, 144, 162], "perfect": 16, "hit": [16, 17, 36, 71, 77, 84, 98, 148], "obliqu": 16, "perfectli": 16, "wall": [16, 44, 101, 108, 124, 127, 129, 148, 150, 152, 161], "veloc": [16, 34, 36, 51, 64, 71, 84, 101, 102, 108, 125, 135, 143, 148, 149, 150, 151, 152, 167], "momentum": [16, 18, 34, 36, 37, 52, 64, 68, 98, 132, 141, 151, 154, 162], "third": [16, 18, 19, 34, 57, 92, 161, 164], "acoust": [16, 31, 38, 39, 52, 87, 88, 91, 93, 96, 104, 105, 123, 140, 150, 167], "p": [16, 17, 31, 84, 86, 88, 94, 97, 98, 102, 106, 118, 140, 170], "hu": [16, 18, 19, 36, 37, 64, 68, 102, 141, 151], "hv": [16, 19, 36, 37, 64, 68, 141, 151], "equal": [16, 19, 32, 34, 35, 36, 37, 49, 51, 55, 72, 75, 77, 99, 101, 115, 139, 142, 148, 150, 152, 162, 164], "far": [16, 18, 19, 41, 45, 70, 81, 128, 130, 132, 135], "symmetri": [16, 49], "physic": [16, 19, 47, 49, 55, 89, 94, 96, 108, 115, 170], "slightli": [16, 19, 42, 57, 125, 126, 132, 142], "complic": [16, 82, 89, 142, 147], "alwai": [16, 19, 24, 28, 29, 30, 34, 36, 37, 44, 57, 58, 62, 71, 88, 97, 114, 115, 119, 120, 132, 136, 144, 148, 150, 152, 162, 167], "alon": [16, 55], "topographi": [16, 17, 19, 27, 34, 35, 36, 37, 47, 48, 49, 52, 57, 63, 68, 72, 75, 83, 113, 114, 118, 119, 120, 121, 123, 124, 127, 130, 133, 136, 142, 143, 144, 156, 157, 163], "artifici": [16, 144], "ignor": [16, 49, 55, 63, 97, 123, 132, 143, 164], "incom": 16, "truncat": [16, 36, 77, 97, 148], "spuriou": [16, 34, 116], "extropl": 16, "dry": [16, 17, 27, 34, 48, 102, 130, 133, 141, 144], "land": [16, 42, 48, 50, 55, 58, 59, 63, 70, 72, 83, 130, 144, 151, 164], "tank": [16, 49, 52], "bc2amr": [16, 127], "calhounhelzellevequ": 16, "envis": 16, "fold": 16, "piec": [16, 52, 94], "glu": 16, "inflat": 16, "websit": [16, 55, 58, 97, 153, 164], "bergercalhounhelzellevequ": 16, "hint": [16, 27, 48, 81, 84, 111, 151, 165], "suppos": [16, 67, 70, 71, 82, 111, 115], "bit": [16, 24, 32, 59, 97, 99, 107, 141], "examin": [16, 38, 39, 47, 70, 111, 135], "own": [16, 22, 26, 30, 36, 62, 88, 89, 95, 96, 105, 106, 113, 115, 127, 140, 153], "todo": [16, 140, 158, 164, 170], "poster": 17, "resourc": [17, 26, 30, 50, 110], "bale": 17, "rossmanith": 17, "siam": [17, 26, 27, 96, 140], "sci": 17, "24": [17, 55, 72, 142], "2002": 17, "955": [17, 142], "978": 17, "author": [17, 27, 48, 52, 92, 96, 97, 102, 114], "1989": 17, "hydrodynam": 17, "phy": 17, "82": 17, "64": [17, 94, 97, 99, 107], "84": [17, 55], "34": [17, 55, 63, 96], "2011": [17, 26, 86], "pp": 17, "1195": 17, "1206": 17, "adv": 17, "awr11": 17, "1998": 17, "anal": 17, "35": [17, 34, 57, 75, 96], "2298": 17, "2316": 17, "bergerleveque2023": [17, 18, 19, 49], "2023": [17, 20, 45, 118, 136, 137, 138], "implicit": [17, 19, 86, 104], "dispers": [17, 18, 48, 49, 52], "submit": 17, "1984": 17, "partial": [17, 78, 113], "differenti": [17, 32], "53": 17, "484": 17, "512": 17, "rigoutso": 17, "1991": 17, "ieee": 17, "tran": 17, "sy": [17, 42, 70, 91, 150, 152], "man": [17, 27, 48, 52, 151, 156, 157], "cyber": 17, "21": [17, 71, 92, 94, 123, 124, 138], "1278": 17, "1286": 17, "2018": [17, 26, 58, 127, 128, 138], "phd": 17, "thesi": [17, 104], "pure": [17, 56, 84, 94, 96, 97, 99, 104, 116, 141], "appl": 17, "geophi": 17, "173": 17, "4055": 17, "4074": 17, "info": [17, 31, 32, 35, 36, 37, 47, 59, 63, 71, 91, 94, 97, 98, 104, 125, 135, 149, 150, 158], "analysi": 17, "evalu": [17, 29, 32, 36, 37, 68, 72, 88, 94, 104, 164, 167], "preprint": 17, "2000": [17, 57, 162, 164], "165": [17, 161], "126": [17, 164], "166": 17, "leveque96": 17, "1996": 17, "advect": [17, 82, 96, 99, 140, 141, 152, 167], "incompress": 17, "leveque1996": 17, "33": [17, 94, 142], "627": 17, "665": 17, "1997": [17, 96], "multi": [17, 55, 88, 119, 121, 124, 127, 167], "131": [17, 96], "327": [17, 96], "353": [17, 96], "wpalg": 17, "cambridg": 17, "press": [17, 99, 105], "uk": [17, 32], "fvmhp_materi": 17, "acta": 17, "numerica": 17, "211": 17, "289": 17, "dg": 17, "actanum2011": 17, "techniqu": [17, 28], "2013": [17, 26, 96], "a351": [17, 96], "a377": [17, 96], "manuel": [17, 86, 96], "quezada": [17, 86, 96], "luna": [17, 86, 96], "matthew": [17, 86, 96], "kneplei": [17, 86, 96], "emmett": [17, 86, 96], "2012": [17, 24, 26, 52, 96], "scalabl": [17, 96], "c210": [17, 96], "c231": [17, 96], "sisc": [17, 96], "month": [17, 55, 96], "nov": [17, 96], "kimetal2017": [17, 19], "kim": [17, 19], "pedersen": 17, "lovholt": 17, "boussinesq": [17, 27, 48, 49, 52, 118, 137], "studi": [17, 19, 52, 68], "break": [17, 18, 30, 32, 48, 52, 55, 63, 75, 116, 124, 144, 151, 164], "phenomena": [17, 19], "long": [17, 18, 19, 30, 32, 49, 51, 52, 55, 63, 74, 96, 124, 132, 149, 164], "coastal": [17, 52, 130, 143, 144, 151, 162], "engin": [17, 55], "122": [17, 42, 70, 142, 164], "2017": [17, 26, 59, 102, 125, 126, 127, 138], "86": 17, "1016": 17, "coastaleng": 17, "005": 17, "kim201775": 17, "jihwan": [17, 19], "geir": 17, "finn": 17, "vholt": 17, "mandlietal2016": 17, "googl": [17, 26, 27, 30, 42, 48, 51, 63, 70, 93, 97, 99, 107, 123, 125, 133, 140, 142], "scholar": 17, "hundr": [17, 36], "calhellev08": 17, "helzel": 17, "circular": 17, "spheric": [17, 49, 55, 118, 137], "review": [17, 92], "2008": [17, 86, 92, 102], "723": 17, "752": 17, "leveque09": 17, "reproduc": [17, 57, 65, 86], "cise": 17, "11": [17, 34, 82, 102, 131, 132, 138], "2009": [17, 92, 97, 102], "27": [17, 55, 63, 72, 142], "levyon03": 17, "darryl": 17, "yong": 17, "solitari": 17, "layer": [17, 27, 47, 63, 94, 119, 121, 124, 125, 127], "media": 17, "math": [17, 51, 55, 108], "63": [17, 142], "2003": 17, "1539": 17, "1560": 17, "mandli13a": 17, "72": [17, 55, 75], "91": 17, "2013it": 17, "aug": [17, 128], "mandli13b": 17, "dawson": 17, "36": [17, 51, 77, 94], "2014": [17, 26, 102, 117, 119, 120, 121, 122, 123, 138], "clint": 17, "okada85": [17, 32, 75], "okada": [17, 27, 32, 48, 49, 114, 162, 166], "deform": [17, 32, 35, 37, 48, 75, 166], "due": [17, 26, 32, 42, 51, 75, 116, 126, 127, 132, 144, 154, 165], "shear": [17, 32], "tensil": 17, "fault": [17, 27, 32, 48, 49, 114, 127, 134, 162, 166], "bull": [17, 32], "seism": [17, 32], "soc": [17, 32], "am": [17, 32], "1985": [17, 32], "1135": 17, "1154": 17, "repositori": [18, 19, 24, 26, 27, 28, 31, 39, 40, 45, 46, 48, 49, 56, 61, 62, 66, 67, 96, 104, 111, 113, 114, 116, 122, 125, 138, 155], "literatur": [18, 19, 52, 140], "situat": [18, 19, 49, 55, 70, 71, 132], "wavelength": [18, 19, 49, 52], "fluid": [18, 19, 34, 36, 49, 52, 64, 72, 118, 143], "swe": [18, 48], "deriv": [18, 19, 65, 75, 86, 91, 95, 96, 106, 116], "longer": [18, 19, 22, 30, 47, 58, 59, 63, 85, 110, 125, 127, 130, 132, 136, 137, 139, 140, 151, 162, 166], "respect": [18, 32, 34, 49, 55, 63, 96, 97, 102, 164], "txx": 18, "altern": [18, 19, 32, 35, 36, 38, 39, 47, 48, 51, 55, 60, 66, 71, 81, 96, 99, 111, 115, 118, 123, 124, 125], "ellipt": [18, 19], "involv": [18, 19, 26, 101, 104, 113, 154, 159], "xx": [18, 118, 138], "tridiagon": 18, "sgn": [18, 48], "serr": [18, 19], "naghdi": [18, 19], "madsen": [18, 48], "sorensen": [18, 48], "properti": [18, 32, 37, 49, 64, 71, 88, 91, 94, 103, 106, 164], "less": [18, 19, 42, 52, 55, 64, 68, 76, 104, 115, 116, 132, 148], "stabl": [18, 19, 85, 94, 132], "plane": [18, 32, 49, 75, 124, 142, 166], "planar": [18, 49, 75, 140, 141], "axisymmetr": [18, 49], "sphere": [18, 27, 32, 48, 49, 51, 89, 118, 120, 136, 137, 141, 151], "topo": [18, 27, 34, 35, 42, 48, 49, 52, 55, 57, 63, 70, 72, 83, 111, 118, 119, 121, 127, 129, 132, 136, 143, 151, 162, 164], "dtopo": [18, 27, 32, 35, 48, 52, 57, 63, 75, 111, 119, 121, 122, 130, 132, 144, 151, 162, 164, 166], "ident": [18, 42, 67, 94, 97, 99, 116, 164], "bouss_": 18, "templat": [18, 89], "bouss": [18, 19, 49, 118], "lapack": [18, 19, 118, 119], "fflag": [18, 19, 30, 43, 66, 76, 89, 109, 162], "llapack": [18, 107], "lbla": [18, 107], "explicit": [18, 109, 149], "lapack_tridiag": 18, "soubroutin": 18, "bla": [18, 19, 118], "bouss_wavetank_matsuyama": 18, "openmp": [18, 24, 27, 44, 78, 109, 115, 124, 130, 161], "somewher": [18, 19, 123], "boussdata1d": 18, "add_data": [18, 19], "bouss_data": [18, 19], "deepbouss": 18, "switch": [18, 31, 48, 55, 62, 101, 111, 116, 118, 126, 143, 166], "bouss_equ": [18, 19], "alpha": [18, 19, 55, 59, 104], "153": [18, 19], "hardwir": [18, 19, 76], "bouss_modul": [18, 19], "tip": [18, 19, 26, 48, 62, 81, 95, 96, 101, 110], "similarli": [18, 36, 43, 56, 93, 99, 101, 142, 161], "bparam": [18, 19], "15": [18, 19, 34, 42, 57, 59, 63, 70, 75, 94, 142, 150, 161, 164], "caus": [18, 19, 24, 36, 52, 55, 58, 65, 66, 72, 78, 84, 86, 107, 116, 124, 125, 126, 128, 132, 147, 149, 162, 164], "revert": [18, 19, 55], "nondispers": [18, 19], "bouss_min_depth": [18, 19], "criterion": [18, 19, 34, 115, 150], "onshor": [18, 19, 34, 49, 63, 68, 70, 142, 144], "nearest": [18, 19, 37, 42, 47, 164], "omit": [18, 19, 62, 116, 118, 125, 139, 151], "unknown": [18, 19, 32, 106], "inund": [18, 19, 34, 48, 49, 55, 68, 115, 130, 143, 166], "shore": [18, 19, 36, 42, 48, 115, 130, 144], "simplest": [18, 19, 62, 74, 108], "known": [19, 34, 44, 71, 75, 76, 82, 105, 107, 116, 126, 148], "landslid": [19, 52], "realist": [19, 55], "test": [19, 24, 27, 32, 38, 41, 44, 54, 55, 59, 60, 61, 62, 68, 81, 86, 87, 89, 95, 96, 102, 109, 110, 115, 120, 124, 125, 126, 127, 130, 132, 136, 140, 152, 158, 161, 162, 164], "One": [19, 25, 27, 28, 32, 34, 47, 48, 55, 58, 64, 70, 71, 72, 89, 109, 115, 118, 123, 164], "momenta": [19, 64], "effici": [19, 52, 56, 86, 96, 97, 98, 106, 115, 142, 149], "consider": [19, 52, 88], "oper": [19, 53, 116, 125], "spars": [19, 118], "huc": 19, "hvc": 19, "expand": [19, 28, 42, 55, 63], "petsc": [19, 24, 25, 78, 86, 88, 95, 98, 105, 106, 107, 109, 118], "mpi": [19, 78, 99, 118], "prerequesit": 19, "simplic": 19, "practic": [19, 30, 111, 113, 154], "variant": [19, 22, 60, 109, 116, 118], "tune": [19, 28, 149], "match": [19, 32, 36, 41, 55, 63, 97, 103, 116, 158, 164], "airi": 19, "theori": [19, 65, 86, 170], "incorpor": [19, 24, 52, 58, 86, 104, 119, 126, 141, 164], "bonneton": 19, "et": 19, "al": 19, "histor": [19, 52, 75, 166], "boussclaw": 19, "successfulli": [19, 66, 103], "reveal": [19, 47, 108], "stabil": [19, 104, 132, 148], "report": [19, 26, 32, 34, 54, 111, 116, 124, 127, 146, 148, 150], "except": [19, 24, 29, 32, 42, 49, 97, 102, 109, 130, 137, 148, 151, 158, 162], "investig": [19, 116], "radial_flat": 19, "num_eqn": [19, 77, 88, 89, 92, 97, 99, 101, 102, 103, 106, 108, 140, 148, 150, 152, 167], "facilit": [19, 47, 64, 96, 116, 123, 125, 130, 136, 153, 158], "boussdata": 19, "bouss_min_level": 19, "bouss_max_level": 19, "bouss_solv": 19, "bouss_tstart": 19, "avoid": [19, 42, 55, 58, 63, 66, 71, 94, 98, 115, 118, 119, 120, 124, 125, 132, 134, 139, 148, 151, 170], "altogeth": 19, "neighborhood": 19, "recogn": [19, 50, 57, 62, 162], "extrem": [19, 55, 107], "motion": [19, 75, 162], "did": [19, 127, 132, 142, 162], "petsc_dir": [19, 99], "petsc_arch": [19, 99], "shell": [19, 30, 61, 62, 76, 82, 84, 99, 105, 108, 111, 125, 146], "dhave_petsc": 19, "petsc_opt": 19, "options_fil": 19, "petscmpiopt": 19, "adequ": [19, 52], "briefli": [19, 170], "gmre": 19, "krylov": 19, "algebra": 19, "multigrid": 19, "precondition": 19, "manualpag": 19, "ksp": 19, "kspsetfromopt": 19, "pc": 19, "pcsetfromopt": 19, "ex": [19, 38, 39, 91, 118], "xgeoclaw": 19, "runex": [19, 118], "bin": [19, 47, 99, 139], "mpiexec": [19, 99], "word": [19, 98, 127, 158], "process": [19, 27, 36, 38, 39, 48, 55, 56, 75, 88, 93, 94, 99, 105, 106, 109, 116, 118, 125, 135, 137, 148, 165], "incorrectli": [19, 124], "configur": [19, 82, 88, 99, 164], "environment": 19, "implicitamr": 19, "accompani": [19, 20, 23, 118, 135, 136, 137], "novemb": [20, 118, 124, 125, 137, 138], "featur": [20, 24, 27, 30, 34, 42, 55, 58, 71, 82, 89, 115, 116, 118, 122, 124, 125, 127, 132, 135, 136, 137, 138, 158, 162], "dev": [20, 26, 30, 58, 59, 99, 118, 127, 128, 133, 134, 135, 136, 137, 138], "diff": [20, 54, 59, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "tarfil": [20, 59, 62, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "pip": [20, 27, 30, 55, 59, 60, 90, 96, 99, 105, 107, 111, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 146], "doc": [20, 25, 26, 30, 32, 55, 59, 92, 109, 110, 111, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 155], "docker": [20, 27, 59, 60, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 169], "migrat": 21, "intermedi": [21, 34, 37, 75, 139, 167], "easiest": [21, 30, 44, 78, 82, 84, 115, 167], "bulk": [21, 88, 102, 108, 140, 150, 167], "convers": [21, 27, 89, 97, 115, 142, 162, 166], "convert43to46": 21, "inspect": [21, 22, 55], "broken": [21, 22, 30, 75, 116], "renam": [22, 24, 38, 39, 66, 101, 104], "achiev": [22, 89, 156, 157], "convert46to50": 22, "_4": 22, "complet": [22, 24, 30, 51, 66, 84, 88, 89, 99, 109, 116, 137], "delet": [22, 30, 58, 62, 137], "combin": [22, 58, 63, 124, 166], "properli": [22, 34, 38, 39, 42, 43, 52, 55, 57, 58, 62, 63, 70, 74, 77, 91, 116, 119, 122, 127, 130, 132, 146, 148, 151, 154, 162, 164, 165, 167], "permut": 22, "th": [22, 24, 47, 140, 167], "reorder": [22, 24], "pattern": [22, 50, 55, 143], "carefulli": [22, 24, 68], "setaux": [22, 24, 67, 89, 119, 120, 140, 148, 150, 152], "sequenc": [22, 24, 36, 37, 67, 70, 72, 99, 105, 108, 109, 116, 119, 126, 140, 167], "maxmx": [22, 89], "maxmi": [22, 89], "maxmz": 22, "declar": [22, 24, 106, 132, 167], "memori": [22, 24, 76, 77, 78, 88, 91, 98, 106, 132, 149, 150], "alloc": [22, 104, 123, 132, 149], "mx": [22, 24, 49, 57, 77, 89, 99, 102, 140, 150, 162, 167], "resp": [22, 32, 132], "mz": [22, 24], "driver": [22, 67], "led": [22, 128], "homepag": [23, 27], "reorgan": [24, 89, 117, 133], "changelog": [24, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 138], "concern": [24, 48, 149], "evolv": [24, 88, 91, 104], "organ": [24, 25, 38, 39, 91], "affect": [24, 66, 125, 126, 132, 135, 137, 148, 162, 165], "assist": [24, 130], "older": [24, 44, 56, 58, 61, 62, 104, 118, 131, 135, 138, 149], "compris": [24, 96, 164], "webpag": [24, 26, 38, 39, 45, 50, 55, 59, 66, 128, 143], "primari": [24, 30, 31, 48, 113, 116, 158], "auxiliari": [24, 89, 91, 97, 102, 103, 104, 106, 140, 148, 150, 152, 167], "cach": [24, 51, 59, 84, 86, 130, 149], "stride": [24, 164], "contingu": 24, "maux": [24, 140, 167], "ma": [24, 36, 42, 70, 142, 164], "relev": [24, 29, 42, 44, 48, 55, 58, 97, 115, 116, 158], "flexibl": [24, 32, 63, 89, 123, 126, 140, 142, 149], "clean": [24, 58, 59, 109, 118, 123, 127, 137], "systemat": 24, "obscur": 24, "clarifi": 24, "regress": [24, 27, 30, 54, 96, 99, 125, 126, 160], "travi": [24, 132], "miss": [24, 27, 97, 118, 129, 136, 137, 154, 158, 162, 164, 165], "conform": [24, 30, 35, 103, 127, 162], "construct": [24, 32, 34, 57, 72, 88, 94, 109, 136, 158, 159, 162], "visit": [24, 27, 81, 138], "gui": [24, 168], "monitor": [24, 27, 35, 36, 41, 48, 70, 72, 76, 120, 122, 125, 135], "arriv": [24, 34, 36, 42, 48, 125, 143, 144], "fgmax": [24, 27, 36, 41, 48, 63, 72, 76, 120, 122, 125, 126, 130, 131, 135, 136, 137, 151], "ndim": [24, 77, 84, 148, 149], "num_dim": [24, 41, 94, 97, 101, 148, 149, 150, 152], "zlower": 24, "yupper": [24, 150, 164], "zupper": 24, "upper": [24, 34, 35, 41, 49, 92, 94, 101, 142, 148, 150, 152, 162, 164], "mxnest": 24, "neg": [24, 42, 144, 151, 162, 164], "ins": 24, "forc": [24, 27, 43, 48, 66, 70, 109, 115, 130, 141, 144, 149, 159, 164, 165], "prohibit": 24, "again": [24, 43, 66, 70, 75, 82, 84, 88, 89, 98, 102, 107, 111, 127, 133, 162, 165], "2d_grid": 24, "attirbut": 24, "gridlines_show": 24, "grideges_show": 24, "openli": 25, "super": [25, 30, 127, 164], "util": [25, 27, 30, 37, 48, 55, 77, 81, 84, 96, 111, 116, 118, 147, 163, 164, 165], "graphic": [25, 30, 56, 71, 81, 135], "visual": [25, 26, 30, 36, 38, 39, 47, 48, 61, 62, 71, 77, 78, 81, 96, 100, 101, 111, 118, 123, 130, 168], "web": [25, 27, 30, 38, 39, 55, 58, 59, 127, 153, 164], "latest": [25, 27, 46, 55, 58, 59, 61, 62, 90, 99, 105, 118, 120, 124], "legaci": [25, 59, 62], "welcom": [26, 86], "answer": 26, "question": [26, 30, 51, 103], "slack": 26, "channel": [26, 45], "workspac": [26, 71, 106], "join": [26, 82], "experi": [26, 52, 104, 137, 154], "warn": [26, 30, 97, 98, 104, 118, 132, 148, 165], "activ": [26, 34, 36, 41, 58, 104, 113, 151], "gitter": 26, "post": [26, 27, 28, 30, 36, 55, 99, 133, 134, 135, 148, 153], "ask": 26, "twitter": 26, "rais": [26, 32, 62, 97, 103, 105, 109, 158, 164], "photo": [26, 27], "ve": [26, 90, 105, 108], "fork": [26, 58, 59], "track": [26, 27, 30, 34, 35, 36, 47, 48, 55, 58, 60, 62, 76, 88, 96, 109, 116, 119, 128, 130, 133, 135, 141, 158], "youtub": [26, 113, 130], "video": [26, 113, 130], "introductori": 26, "webinar": 26, "csdm": 26, "2019": [26, 56, 128, 129, 130, 138], "randi": [26, 32, 92, 94], "plan": [26, 30, 52, 60, 61, 62, 68, 97, 104, 136, 158], "schedul": 26, "annual": 26, "meet": 26, "took": 26, "onlin": [26, 110, 114, 127, 155, 162], "covid": 26, "four": [26, 72, 94, 115, 116], "short": [26, 49, 52, 101, 132], "slide": 26, "tulan": 26, "clifford": 26, "lectur": 26, "april": [26, 130, 131, 138], "minisymposterium": 26, "cse": 26, "confer": 26, "februari": [26, 126, 132, 133, 138], "march": [26, 27, 34, 41, 42, 48, 119, 120, 138, 142], "boulder": 26, "2015": [26, 59, 102, 123, 124, 125, 138], "summari": [26, 27, 45, 59, 127, 148, 149, 150, 151], "tackl": [26, 30], "progress": [26, 30, 104, 113, 118, 123, 162, 164], "held": [26, 52], "zoom": [26, 55], "conjunct": [26, 42, 70, 97, 115], "23": [26, 130, 131, 138, 149], "25": [26, 34, 42, 45, 57, 70, 75, 88, 94], "28": [26, 122, 123, 126, 127, 128, 129, 130, 138], "unives": 26, "colorado": 26, "immedi": [26, 52, 71, 88, 90, 91, 98], "august": [26, 127, 135, 136, 138], "utah": 26, "hpc": 26, "swag": 26, "introduct": 27, "commit": [27, 32, 54, 58, 59, 116], "licens": [27, 48, 52, 96, 114, 127], "cite": [27, 59, 61, 138], "fund": [27, 60, 96], "troubleshoot": [27, 60, 61, 96], "amazon": 27, "servic": [27, 65, 86], "ec2": 27, "ami": 27, "77": [27, 67, 107], "statist": [27, 124], "b4run": [27, 131], "sytl": [27, 36, 81], "checkpoint": [27, 47, 118, 124, 125, 127, 129, 132, 148, 150, 152], "share": [27, 28, 55, 62, 76, 78, 94, 97, 99], "gpu": [27, 129], "cautionari": [27, 48, 67, 151], "registr": [27, 48, 127, 162, 164], "earth": [27, 42, 48, 51, 56, 63, 70, 75, 123, 125, 133, 142, 151], "slip": [27, 32, 48, 49, 114, 162, 166], "sea_level": [27, 34, 42, 48, 52, 63, 102, 130, 144, 151, 162, 164], "eta": [27, 32, 36, 37, 42, 47, 48, 72, 115, 123, 130, 143, 151], "lagrangian": [27, 47, 48, 130], "particl": [27, 36, 47, 48, 130, 135], "friction": [27, 48, 52, 151, 156, 157], "fgout": [27, 34, 47, 48, 63, 72, 135, 137, 151], "nearshor": [27, 34, 36, 47, 48, 52], "front": [27, 34, 41, 42, 48, 71, 103, 109, 142], "geometri": [27, 32, 49, 75, 96, 97, 101, 103, 106, 123], "jupyt": [27, 46, 48, 75, 78, 96, 110, 114, 123, 124, 130, 140], "notebook": [27, 32, 34, 42, 46, 48, 58, 70, 75, 78, 90, 96, 98, 114, 123, 124, 130, 140, 141, 142, 164], "concept": [27, 140], "pointwis": [27, 34, 57, 106, 123, 162], "potenti": [27, 71, 125, 143], "fly": 27, "commun": [27, 55, 86, 106, 109, 111, 115, 127], "hope": [28, 116], "greatli": [28, 36, 86, 118, 135, 143], "submodul": [28, 30, 56, 59, 61], "stai": [28, 34], "annot": [29, 63], "map2d_to_1d": 29, "unavail": 29, "sens": [29, 55, 64, 127, 132, 170], "context": [29, 55, 167], "plotdata": [29, 36, 37, 47, 82, 84, 91, 118, 124, 125, 147], "els": [29, 30, 62, 70, 106, 127, 142, 144, 152], "scalar": [29, 32, 42, 98, 106, 140, 144, 148, 170], "moment": [29, 32, 128], "outn": 29, "outaux": 29, "prepar": 30, "substanti": [30, 58, 86, 123, 129, 132], "incompat": [30, 55], "built": [30, 31, 49, 68, 78, 87, 96, 99, 101, 103, 115, 116, 156, 157], "correctli": [30, 34, 89, 95, 123], "Be": [30, 71, 143, 166], "verbos": [30, 32, 35, 37, 51, 63, 70, 91, 94, 98, 104, 116, 142, 148, 150, 152, 158, 164], "messag": [30, 43, 51, 58, 62, 71, 76, 91, 94, 98, 100, 103, 104, 106, 107, 118, 132, 148, 150, 152, 165], "wise": [30, 104], "especi": [30, 55, 89, 101], "necessit": 30, "modif": [30, 43, 65, 71, 82, 86, 92, 151], "compat": [30, 32, 35, 51, 55, 63, 75, 77, 81, 97, 99, 107, 120, 121, 125, 126, 136, 164], "explan": 30, "tracker": 30, "increasingli": 30, "push": [30, 58, 59], "unlik": [30, 34, 58, 59, 77], "accid": 30, "subrepositori": [30, 59], "oppos": [30, 159], "inter": [30, 126], "proceed": [30, 58], "txt": [30, 34, 47, 54, 59, 64, 86, 98, 118, 125, 126, 127, 139, 158], "isol": [30, 62], "editabl": 30, "site": [30, 55, 62, 111], "pull_al": [30, 59], "sh": [30, 58, 59, 99], "prompt": [30, 31, 71, 82, 84, 93, 96, 108, 164], "shortli": [30, 116], "handi": [30, 66], "uncommit": [30, 54, 59], "checkout": [30, 56, 58, 59, 61], "claw_git_statu": [30, 54, 59, 131], "claw_git_diff": [30, 54, 59], "usernam": [30, 31], "mind": 30, "password": 30, "whenev": [30, 124, 167], "brought": 30, "new_featur": 30, "accident": [30, 82], "recov": [30, 35], "histori": [30, 37, 59, 62, 84], "throw": [30, 137], "awai": [30, 143], "recreat": [30, 43, 66, 130], "rebas": 30, "onto": [30, 32, 55, 144, 164], "newer": [30, 76, 92, 127], "head": [30, 32, 58], "cleaner": [30, 125], "recompil": [30, 43, 44, 66, 76, 109, 118, 130, 149, 167], "nosetest": [30, 39, 40, 99, 105, 116, 160], "fail": [30, 97, 99, 109, 116, 123, 158], "pr": [30, 59, 116, 127], "someon": [30, 66], "propos": [30, 170], "rid": 30, "cross": [30, 49], "poor": 30, "whole": [30, 55, 98, 99], "lot": [30, 42, 118, 130], "doesn": [30, 34, 62, 67, 106], "pep8": 30, "aim": 30, "vim": 30, "nice": [30, 63, 89, 101, 120, 142], "underlin": 30, "nose": [30, 39, 40, 87, 99, 116, 136, 160], "suit": [30, 55, 116], "exactli": [30, 35, 36, 54, 56, 72, 106, 142, 148], "overrid": [30, 44, 55, 88, 89, 109], "bind": [30, 55, 81, 89, 99], "dockerhub": [31, 59], "riemann_book": [31, 141], "0_dockerimag": 31, "8889": 31, "0_contain": 31, "serv": 31, "jovyan": 31, "exit": [31, 82, 99, 105], "ctrl": [31, 82], "quit": [31, 71, 82, 84, 154], "whatev": [31, 88, 103, 140], "ip": [31, 82, 84], "localhost": 31, "token": 31, "wherev": [31, 165], "ones": [31, 88, 89, 106, 127, 148, 149], "ipynb": [31, 32, 34, 42, 75, 114, 124, 141, 142], "chile2010a": [31, 114], "exercis": [31, 48, 114, 116], "transfer": 31, "laptop": [31, 96], "accomplish": [31, 42, 66], "0_geoclaw_dockerimag": 31, "contains": 31, "rm": [31, 58, 59, 66, 165], "1_contain": 31, "rmi": 31, "1_dockerimag": 31, "prune": 31, "dockeril": 31, "root": [31, 62, 97, 98, 103], "dockerfile_v5": 31, "0_geoclaw": 31, "test_bind": 31, "subfault": [32, 48, 127, 128, 166], "seafloor": [32, 52, 75, 144, 166], "rise_tim": [32, 75], "rise": [32, 75, 143, 144], "rise_time_start": [32, 75], "piecewis": [32, 34, 42, 47, 49, 57, 72, 75, 120, 140, 142, 162], "quadrat": [32, 75], "rise_time_end": [32, 75], "rise_fract": [32, 75], "csv": [32, 75, 127], "erron": [32, 75], "dtopotools_exampl": [32, 75, 114], "test_dtopotool": 32, "deal": [32, 52, 81, 98, 99, 106, 158, 164], "sub": [32, 116, 164], "dtopographi": [32, 75], "ucsbfault": [32, 75], "csvfault": [32, 75], "siftfault": [32, 75, 127], "segmentedplanefault": [32, 75], "fault1d": 32, "subfault1d": 32, "dtopography1d": 32, "plot_dz_contour": 32, "plot_dz_color": 32, "mw": [32, 127], "strike_direct": 32, "input_unit": 32, "coordinate_specif": [32, 75], "subclass": 32, "row": [32, 34, 57, 92, 115, 162, 164], "rupture_typ": [32, 75], "static": [32, 75, 127], "dtopo_typ": [32, 35, 49, 63, 75], "repres": [32, 49, 88, 94, 97, 101, 102, 104, 106, 164, 170], "dz_at_t": 32, "dz": [32, 35, 49, 144, 162], "dz_max": 32, "ab": [32, 56, 101, 109, 115, 142, 164], "self": [32, 35, 37, 104, 136, 164], "cmax_dz": 32, "dz_interv": 32, "colorbar_ticks": 32, "colorbar_labels": 32, "fig_kwarg": [32, 164], "appar": [32, 72, 76], "dz_cellave_at_t": 32, "compos": [32, 88], "mo": 32, "seismic": [32, 37, 48, 75], "containing_rect": 32, "create_dtopo_xi": [32, 75], "rect": [32, 142], "016666666666666666": 32, "buffer_s": [32, 75], "buffer": [32, 42, 47, 115, 124, 125, 149, 150, 164], "x1": [32, 34, 35, 36, 41, 51, 63, 89, 98, 115, 142, 149, 150, 151, 164], "x2": [32, 34, 35, 36, 41, 51, 63, 98, 115, 142, 149, 150, 151, 164], "y1": [32, 34, 35, 36, 41, 51, 63, 89, 98, 115, 142, 149, 150, 151, 164], "y2": [32, 34, 35, 36, 41, 51, 63, 98, 115, 142, 149, 150, 151, 164], "create_dtopographi": [32, 75], "valueerror": [32, 158, 164], "plot_subfault": 32, "plot_centerlin": 32, "slip_color": 32, "cmap_slip": 32, "cmin_slip": 32, "cmax_slip": 32, "slip_tim": 32, "plot_rak": 32, "xylim": 32, "plot_box": [32, 164], "axessubplot": 32, "centroid": [32, 75], "dip": [32, 49, 75], "jet": [32, 71], "rake": [32, 75], "drawn": [32, 55, 147], "plot_subfaults_depth": 32, "column_map": 32, "skiprow": 32, "delimit": 32, "dict": [32, 37, 91, 97, 102, 103, 106, 158, 164], "strike": [32, 75], "calculate_geometri": 32, "kinemat": [32, 48], "skip": [32, 130], "width": [32, 36, 49, 55, 63, 75, 77, 94, 101, 106, 115, 142, 150, 152], "rigid": [32, 127], "mu": [32, 127], "set_dynamic_slip": 32, "slip_at_dynamic_t": 32, "column_list": 32, "output_unit": 32, "adopt": [32, 104], "Not": [32, 55, 94, 125, 132], "noaa": [32, 42, 51, 57, 70, 75, 127, 143, 158, 162, 166], "sift": [32, 75, 127], "ucsb": [32, 75, 166], "definit": [32, 71, 88, 115, 122], "gov": [32, 42, 51, 70, 75, 99, 158], "aboutu": 32, "020204mag_polici": 32, "php": [32, 65, 86], "sift_slip": 32, "longitude_shift": 32, "subset": [32, 34, 42, 70, 127, 142, 162, 164, 166], "load_sift_unit_sourc": 32, "pmel": [32, 75], "pub": [32, 158], "gica2937": 32, "although": [32, 55, 67, 71, 100, 101, 103, 115, 128, 134, 164], "notat": [32, 51, 63, 140], "compress": [32, 97, 164], "info_sz": 32, "dat": [32, 158], "acsza1": 32, "acszb1": 32, "set_subfault": 32, "assign": [32, 34, 36, 88, 91, 97, 103], "coodin": 32, "pascal": [32, 158], "centerlin": 32, "respecitv": 32, "mix": [32, 41, 55, 75], "nctr": [32, 75], "upstrik": [32, 75], "updip": [32, 75], "calculate_geometry_triangl": 32, "triangular": [32, 48, 127], "lat": [32, 51, 55, 57, 63, 162, 164], "convert_to_standard_unit": 32, "measur": [32, 47, 49, 51, 75], "dynamic_slip": [32, 128], "rupture_tim": [32, 75], "rise_shap": 32, "gauss_pt": 32, "latitutd": 32, "modulu": [32, 102, 108, 150, 167], "shape": [32, 37, 42, 51, 63, 70, 89, 94, 97, 99, 106, 142, 164], "displac": [32, 36, 48, 49, 52, 75, 144, 151, 166], "1992": 32, "okadamap": 32, "rigin": 32, "dave": 32, "xiaom": 32, "wang": 32, "rewritten": 32, "dicuss": 32, "movement": 32, "sec": 32, "pw": [32, 34], "smooth": [32, 72, 104, 115, 167], "ruptur": [32, 48], "set_corn": 32, "projection_zon": 32, "iter": [32, 42, 70, 102], "1000000": 32, "x0": [32, 51], "orthogon": 32, "subdividedplanefault": 32, "base_subfault": 32, "nstrike": 32, "ndip": 32, "slip_funct": 32, "subdivid": [32, 75], "uniform": [32, 34, 36, 37, 48, 70, 75, 78, 89, 127, 162], "subdivis": 32, "slip_distribut": 32, "xi": [32, 167], "rescal": 32, "tensorproductfault": 32, "fault_plan": 32, "slip_along_strik": 32, "slip_down_dip": 32, "goe": [32, 48, 58], "constant": [32, 34, 36, 49, 52, 63, 68, 72, 99, 102, 140, 141, 142, 144, 151, 164, 167], "tensor": 32, "chen": [32, 166], "ji": [32, 166], "geol": 32, "edu": [32, 55, 97, 129], "faculti": 32, "big_earthquak": 32, "sea": [32, 47, 48, 50, 52, 55, 72, 75, 112, 123, 130, 143, 162, 164, 166], "floor": [32, 48, 75], "durat": [32, 132, 143], "slope": [32, 104, 132], "rf": [32, 58, 59], "bear": [32, 51, 118], "movabl": 32, "latlong": [32, 55], "happen": [33, 55, 66, 88, 103, 106, 130, 165], "filenam": [33, 55, 123, 135, 136, 164], "fgmax_tool": [34, 122, 130, 136, 151], "increment": [34, 47, 55, 94, 109, 148, 150, 152], "record": [34, 45, 47, 64, 106, 138, 158, 166], "observ": [34, 52, 119, 132, 143, 148, 151, 159, 166], "align": [34, 36, 42, 55, 63, 70, 130, 132, 151], "arbitrari": [34, 36, 63, 104, 119, 142, 151], "transect": [34, 51, 63, 118, 151], "coastlin": [34, 55, 70, 72, 130, 142, 151, 166], "quadrilater": [34, 63], "dem": [34, 48, 57, 63, 127, 162, 164, 166], "topo_typ": [34, 42, 49, 57, 63, 70, 123, 124, 127, 130, 162, 164], "point_styl": [34, 35, 70, 122], "fgmax_grid": [34, 35, 63, 130, 136, 151], "junction": 34, "purpos": [34, 36, 48, 52, 57, 65, 71, 77, 86, 94, 114, 116, 139, 142, 148], "maxima": [34, 76], "fgmax_data": [34, 151], "fgmaxgrid": [34, 35, 136, 151], "fgmax0001": 34, "fgno": [34, 35, 36, 37, 136], "sequenti": [34, 36], "fg_maxnum_fgrid": 34, "fgmax_modul": 34, "recomil": 34, "everyth": [34, 59, 62, 76, 99, 108, 109, 116, 127], "fg": 34, "tstart_max": 34, "tend_max": 34, "dt_check": 34, "min_level_check": 34, "arrival_tol": 34, "interp_method": 34, "npt": [34, 51], "xy_fil": 34, "regular": [34, 164], "cartesian": [34, 50, 63, 89, 151], "nx": [34, 36], "ny": [34, 36], "n12": 34, "n23": 34, "x3": [34, 63, 98], "y3": [34, 63, 98], "x4": [34, 63], "y4": [34, 63], "fourth": [34, 57], "perimet": 34, "intersect": [34, 49, 70, 75], "connect": [34, 49, 51, 58, 63, 70, 118, 130, 142], "expect": [34, 72, 102, 108, 109, 110, 116, 127, 128, 130, 132, 150, 151, 152, 158], "topofil": [34, 35, 49, 57, 63, 127, 128, 129, 130, 151, 162, 164], "south": [34, 49, 162], "preprocess": [34, 123], "satisfi": [34, 42, 70, 104, 115, 142, 170], "captur": [34, 47, 52, 64, 142, 162], "posit": [34, 42, 55, 75, 78, 109, 151, 162, 164], "digit": [34, 36, 42, 57, 63, 64, 82, 125, 126, 127, 164], "correspondingli": 34, "1e9": [34, 41, 64], "simul": [34, 38, 39, 40, 42, 50, 52, 55, 71, 72, 91, 94, 96, 98, 99, 101, 105, 108, 113, 125, 126, 127, 129, 142, 144, 158], "exce": [34, 55, 115, 149], "care": [34, 42, 48, 99], "start_max": 34, "natur": [34, 49, 58, 140, 170], "discard": [34, 104], "reiniti": [34, 125], "depress": 34, "margin": [34, 48], "fgmax_valu": 34, "eta_tild": 34, "speed": [34, 36, 37, 49, 88, 92, 102, 108, 118, 125, 130, 140, 141, 148, 151, 158, 159, 164, 167, 170], "harbor": 34, "ship": 34, "ground": [34, 75, 130], "fg_num_val": 34, "num_fgmax_v": [34, 151], "govern": [34, 151], "fgmax_interpol": 34, "fgmax_interpolate0": 34, "fgmax_interp": [34, 132], "unrealist": [34, 72], "island": [34, 42, 70, 142], "65": 34, "amr_levels_max": [34, 115, 149, 150], "8000": 34, "e10": 34, "stop": [34, 76, 82, 118, 119, 127, 150, 152, 164], "20": [34, 42, 53, 55, 57, 63, 70, 79, 82, 102, 115, 149, 150, 151, 162, 164], "const": 34, "fg1": 34, "valuemax": 34, "aux1": 34, "fgmax0002": 34, "explicitli": [34, 67, 71, 96, 132, 148, 165, 170], "dealt": [34, 42], "read_output": [34, 35, 136], "paragraph": 34, "qoi": [34, 37], "2n": 34, "hmin": 34, "13": [34, 47, 161], "99999000e": 34, "99": [34, 150, 152], "never": [34, 72, 101, 106, 112, 115, 130, 142, 148, 150, 152, 165], "met": [34, 65, 86], "make_input_fil": 34, "readm": [34, 36, 58, 59, 130, 140, 146, 167], "chile2010_fgmax": [34, 36, 135], "bound": [35, 37, 89, 92, 99, 136, 142, 148, 164], "interp_dz": 35, "dtopo_path": 35, "b0": [35, 37], "event": [35, 48, 52, 63, 65, 75, 86, 143, 144, 148], "ps4_to_arrai": 35, "mask": [35, 42, 48, 53, 142, 164], "topo_styl": 35, "xy_fnam": 35, "read_fgmax_grids_data": 35, "data_fil": [35, 37], "ij": [35, 136], "xy": [35, 63, 136], "layout": [35, 58, 136], "unexpect": [35, 51, 55, 63, 66, 158], "indent": [35, 51, 63], "quot": [35, 63], "unind": [35, 63, 158], "topotool": [35, 42, 48, 51, 57, 63, 70, 120, 121, 122, 123, 124, 127, 128, 133, 136, 162, 163], "write_to_fgmax_data": 35, "fid": [35, 37], "adjust_fgmax_1d": 35, "x1_desir": 35, "x2_desir": 35, "x1_domain": 35, "x1_new": 35, "x2_new": 35, "npoint": 35, "linspac": [35, 71, 91, 108, 142], "fgout_tool": [36, 151], "complement": 36, "coincid": 36, "wherea": [36, 47, 55, 72, 81, 99], "occur": [36, 66, 75, 158, 159], "signific": [36, 68, 135, 138, 143, 164], "increas": [36, 37, 47, 55, 63, 76, 142, 151], "degrad": 36, "had": [36, 47, 56, 57, 125, 126, 127, 128, 132, 144], "tempor": [36, 47, 64], "seri": [36, 47, 64, 72, 158], "fact": [36, 55, 72, 97, 106, 110, 115, 144], "gauag": 36, "massless": 36, "tracer": [36, 141], "debri": 36, "fixedgrid": [36, 48, 135, 137], "carri": 36, "throughout": [36, 72, 125], "fgout_data": [36, 151], "fgout_grid": [36, 37, 63, 151], "fgoutgrid": [36, 37, 151], "runtim": [36, 109], "binary32": [36, 47, 77, 97, 135, 148, 150, 152], "200": [36, 55, 88, 108, 123, 152], "250": 36, "115": 36, "55": 36, "tstart": [36, 104], "tend": [36, 42, 104], "nout": [36, 77, 152], "37": [36, 51], "ascii": [36, 47, 57, 71, 88, 91, 98, 103, 125, 135, 136, 139, 148, 150, 152, 162, 168], "binary64": [36, 47, 77, 97, 135, 148, 150, 152], "float64": [36, 135, 148], "kind": [36, 91, 93, 98, 118, 129, 135, 140, 148], "float32": [36, 135, 148], "dump": [36, 77, 97, 135, 136, 148], "raw": [36, 97, 135, 148], "almost": [36, 148, 154], "precis": [36, 37, 44, 47, 63, 77, 89, 94, 97, 140, 148, 164], "fgout0001": 36, "t0000": [36, 71], "q0000": [36, 71, 148], "b0000": 36, "amr_level": [36, 77], "hierarchi": [36, 55, 94, 111], "file_prefix": [36, 97, 103, 135], "easier": [36, 62, 81, 125, 127, 142, 167], "manipul": [36, 47, 164], "fgframe": 36, "read_fram": [36, 37], "lazi": 36, "hss": [36, 37], "plottool": [36, 42, 70, 130], "pcolorcel": [36, 42, 70, 130, 142], "minimalist": 36, "geoplot": [36, 53, 55, 83], "cmap": [36, 42, 55, 63, 70, 82, 142, 164], "land_color": 36, "masked_wher": 36, "eta_plot": 36, "tsunami_colormap": 36, "overlap": [36, 115, 119, 120, 162], "fgout_interp": 36, "fgout_modul": 36, "unphys": 36, "intepol": 36, "fgout_writ": 36, "fgoutfram": 37, "make_fgout_fcn_xi": 37, "make_fgout_fcn_xyt": 37, "write_netcdf": 37, "read_netcdf": [37, 42, 70, 127, 128, 162, 164], "reconstruct": [37, 96, 104, 158], "read_netcdf_arrai": 37, "extract": [37, 55, 97, 136, 158, 164, 166], "print_netcdf_info": 37, "drytol": 37, "extent_cent": 37, "extent": [37, 41, 42, 52, 60, 63, 68, 70, 71, 88, 94, 106, 119, 132, 142, 162, 164], "extent_edg": 37, "read_fgout_grids_data": 37, "set_plotdata": 37, "write_to_fgout_data": 37, "get_as_arrai": 37, "rootgrp": 37, "bounds_error": 37, "fill_valu": [37, 97, 164], "nan": [37, 51, 164], "behavior": [37, 48, 58, 72, 115, 116, 124, 130, 132, 154], "regulargridinterpol": 37, "fgout1": 37, "fgout2": 37, "method_xi": 37, "method_t": 37, "linearli": 37, "fname_nc": 37, "contin": 37, "bfinal": 37, "qoi_arrai": 37, "fgout_fram": 37, "nc": [37, 42, 70, 127, 158, 162], "datatyp": 37, "f4": 37, "include_b0": 37, "include_bfin": 37, "metadata": [37, 77, 162, 164], "f8": 37, "byte": [37, 47, 77, 97], "twice": [37, 55, 139, 148], "downstream": 37, "field": [37, 47, 63, 101, 103, 106, 125, 127, 135, 158, 159], "first_test": 38, "euler_2d": [38, 40, 96, 101], "shock_bubble_interact": [38, 40, 93, 96, 105], "iplot": [38, 40, 93, 96, 99], "That": [38, 40, 42, 108, 162], "ensur": [38, 39, 40, 71, 113], "install_prerequisit": 38, "acoustics_1d_example1": [38, 39, 74], "statement": [38, 39, 71, 77, 110, 111, 118, 125, 134, 150], "troubl": [38, 39, 81, 96], "xclaw": [38, 39, 91], "plotting_makeplot": [38, 39], "fortfil": [38, 39], "install_fortran": 39, "prerequisit": [39, 40, 48, 60, 62, 118], "sv": [39, 160], "runtest": [39, 99, 160], "acoustics_1d_heterogen": [39, 160, 167], "regression_test": [39, 160], "acoustics1dheterogeneoustest": [39, 160], "acoustics_3d_heterogen": [39, 160], "acoustics3dheterogeneoustest": [39, 160], "advection_2d_annulu": [39, 160], "advection2dannulustest": [39, 160], "ran": [39, 160], "639": [39, 160], "manual": [40, 89, 98, 105, 107, 116, 160], "launch": [40, 93, 99, 100, 105], "setup": [40, 59, 88, 89, 93, 96, 99, 101, 104, 105, 106, 114, 146, 165], "regiondata": [41, 115, 150, 151], "minlevel": [41, 115, 132, 142, 149, 150, 151], "maxlevel": [41, 71, 115, 132, 142, 149, 150, 151], "clariti": 41, "ultim": 41, "flagregiondata": [41, 130], "everywher": [41, 42, 51, 68, 106, 144], "supplement": [41, 70, 153], "rundatat": 41, "region_domain": 41, "spatial_region_typ": 41, "spatial_region": 41, "restrict": [41, 55, 127, 142, 151, 162], "insid": [41, 94, 99, 103, 140, 142, 164], "trapezoid": 41, "region_trapezoid": 41, "spatial_region_fil": 41, "ruledrectangle_trapezoid": 41, "region_tool": [41, 42, 70, 130, 131, 142], "rr": [41, 70, 71, 84, 142], "ruledrectangl": [41, 70, 130, 142], "piecewiselinear": 41, "ixi": [41, 70, 140, 142], "advection_2d_flagregion": 41, "constraint": [42, 47, 142, 149, 170], "dike": [42, 70, 130, 151], "creation": [42, 82, 96, 119], "even": [42, 52, 55, 62, 65, 75, 86, 97, 109, 115, 130, 149, 150, 162, 165, 167], "inlin": [42, 141], "marching_front": [42, 70, 130], "zmin": [42, 70], "60": [42, 55, 70, 75, 76, 130, 149], "zmax": [42, 70], "40": [42, 55, 70, 77, 115, 151, 161], "land_cmap": 42, "make_colormap": [42, 70, 82], "sea_cmap": 42, "norm": [42, 63, 70, 115, 164], "add_colormap": [42, 70, 124, 130], "data_limit": [42, 70], "data_break": [42, 70, 164], "sea_cmap_dri": 42, "cmap_dri": [42, 70], "norm_dri": [42, 70], "sw": [42, 57, 70, 141], "coast": [42, 70, 115, 144, 164], "whidbei": [42, 70, 142], "maxwelton": [42, 70], "beach": [42, 70, 141], "marchingfront": 42, "region1_png": [42, 70], "imread": [42, 70], "region1": [42, 70], "46": [42, 70, 164], "38": [42, 70], "47": [42, 70, 142], "93": [42, 70, 124], "96": [42, 70], "imshow": [42, 70, 118, 164], "48": [42, 55, 70, 142], "puget": [42, 70, 142], "sound": [42, 70, 88, 102, 108, 142], "ncei": [42, 70, 143, 162, 166], "thredd": [42, 70, 162, 166], "ngdc": [42, 70, 143], "dodsc": [42, 70], "puget_sound_13_mhw_2014": [42, 70], "colorbar": [42, 63, 70, 127, 130, 142, 147, 164], "mhw": [42, 48, 52, 143, 162, 166], "wetland": [42, 70], "lake": [42, 48, 70, 144, 151, 162], "repeat": [42, 70, 84, 139, 149, 151], "wet_point": [42, 70], "select_by_flood": [42, 70], "z1": [42, 70], "z2": [42, 70], "max_it": [42, 70], "zdry": [42, 70], "masked_arrai": [42, 70, 142], "279936": [42, 70], "112": [42, 70], "59775": [42, 70], "mislead": [42, 72], "pink": [42, 63, 82, 147], "distinguish": 42, "wet": [42, 48, 70, 72, 142, 151], "mask_dri": 42, "logical_not": [42, 70], "z_dry": 42, "mask_dry_onshor": 42, "logical_and": [42, 70], "z_allow_wet": 42, "rotat": [42, 49, 53, 136], "dry_point": 42, "shorelin": [42, 55, 164], "inland": [42, 70, 151], "sum": [42, 47, 75, 98, 106, 161], "3x3": 42, "dry_points_sum": 42, "reset": [42, 44, 58, 109], "white_r": 42, "461": 42, "379": 42, "929": 42, "961": 42, "z_format": [42, 70, 164], "1i": [42, 70], "fuction": 42, "set_xyz": [42, 164], "force_dry_init_topo": 42, "_y": [42, 70, 164], "_z": [42, 70, 164], "generate_2d_coordin": [42, 70, 164], "fname_force_dry_init": 42, "864": 42, "ncol": [42, 123], "324": 42, "nrow": 42, "224599074275750e": 42, "02": [42, 63, 97, 102, 150], "793009258334999e": 42, "259259000800000e": 42, "05": [42, 92, 102], "cellsiz": [42, 57, 123, 162], "9999": [42, 57, 162, 164], "nodata_valu": [42, 164], "forcedri": [42, 151], "force_dri": [42, 63, 130], "fname": [42, 63, 132, 142, 150, 151, 152], "qinit_data": [42, 144, 151], "force_dry_list": [42, 151], "setprob": [42, 67, 150, 152, 167], "qinit_modul": 42, "filval": 42, "t_stays_dri": 42, "gotten": 42, "offer": [43, 55, 116], "Or": [43, 63, 84, 142, 164], "dot": [43, 47, 55, 63, 66, 165], "unix": [43, 74], "invis": [43, 123], "encount": [43, 55, 82, 105, 107], "catch": [43, 96], "bash": [44, 55, 61, 62, 71, 76, 99, 111, 146], "export": [44, 55, 61, 62, 71, 76, 99, 107, 146], "f77": [44, 165], "compliant": 44, "yourself": [44, 47, 61], "rerun": [44, 47, 57, 59, 62], "scan": 44, "abil": [44, 118, 123, 125, 129, 158, 164], "meant": [44, 94, 104, 158], "pedant": 44, "fbound": 44, "ffpe": 44, "trap": 44, "invalid": [44, 103], "overflow": [44, 118, 126], "optim": [44, 86, 109], "o2": [44, 76], "fopenmp": [44, 76, 109], "dnetcdf": [44, 162], "lnetcdf": 44, "netcdf4_dir": 44, "ifort": 44, "cb": 44, "cu": 44, "fpe0": 44, "ftrapuv": 44, "fp": 44, "qopenmp": 44, "omp_num_thread": [44, 76, 125, 161], "thread": [44, 76, 115, 130, 161], "2006": [45, 151], "playlist": 45, "pressur": [47, 71, 84, 98, 102, 108, 126, 127, 151, 158, 159], "tide": [47, 48, 51, 127, 143, 164], "behav": [47, 49], "difficult": 47, "clearli": [47, 52, 55, 142], "accuraci": [47, 68, 78, 150, 152], "nonphys": 47, "oscil": [47, 170], "prior": [47, 64, 65, 86, 138, 144, 150, 152, 167], "gaugedata": [47, 64, 150], "gaugeno": [47, 64, 150], "meqn": [47, 77, 140, 167], "varieti": [47, 91], "basi": [47, 71], "file_format": [47, 97, 103, 135, 158], "smallest": [47, 115, 142], "reduct": [47, 118], "display_format": [47, 64], "e15": 47, "q_out_field": 47, "aux_out_field": 47, "min_time_incr": [47, 64], "amount": [47, 52, 58], "decreas": [47, 144, 162], "effect": [47, 55, 68, 71, 94, 98, 115, 116, 143, 151, 154, 164], "turn": [47, 50, 52, 63, 79, 82, 98, 116, 124, 130, 135], "id": [47, 51, 103], "e26": 47, "16": [47, 55, 63, 75, 94, 142, 148], "e8": 47, "multilay": [47, 120, 123, 126, 127, 128], "accumul": [47, 125, 139], "intermit": [47, 125], "max_buff": [47, 125], "gauges_modul": [47, 123, 125], "distinct": [47, 125], "gauge00001": [47, 64, 125], "quickli": [47, 58, 63, 90, 125, 144, 164], "overwritten": [47, 97, 98, 125, 139, 167], "gaugexxxxx": [47, 125, 139], "monoton": [47, 148, 151], "pars": [47, 109], "gaugesolut": 47, "gauge_id": 47, "getgaug": 47, "plotfigur": [47, 82, 118, 147], "300": [47, 142], "each_gaug": 47, "1d_plot": [47, 82, 84, 147], "setgaug": [47, 124], "each_fram": 47, "plotclaw": [47, 81, 82, 84, 147], "plotgaug": 47, "loop": [47, 71, 81, 109, 115, 118, 127, 130, 132, 140, 144, 147, 148, 167], "cleargaug": 47, "_output_from_previous_run": 47, "2d_pcolor": [47, 55], "addgaug": 47, "plot_gauge_loc": 47, "format_str": 47, "ko": 47, "add_label": 47, "overview": [48, 55, 81, 117, 121, 130], "teach": [48, 52, 114], "guarante": [48, 52, 104, 114], "liabil": [48, 52, 65, 86, 114], "underwat": [48, 55], "robust": [48, 127, 141, 164], "gallery_geoclaw": 48, "dtopotool": [48, 75, 121, 122, 124, 127, 128, 162, 163], "kmltool": [48, 51, 130, 131, 133, 163], "geo": [48, 68], "chile": [48, 63, 75], "2010": [48, 63, 75, 151], "dart": 48, "buoi": 48, "previous_pts_chosen": 48, "arcsecond": [48, 162], "force_dry_init": [48, 130], "topograpi": [48, 162], "wide": [49, 62, 111, 141], "insur": [49, 54, 58, 66, 84, 115, 119, 123, 149, 151, 162], "contrast": [49, 57, 142], "newli": 49, "roughli": [49, 56, 142, 161], "transit": [49, 136, 137], "sometim": [49, 62, 66, 70, 78, 82, 88, 98, 118, 127, 134, 143, 144, 151, 159, 166], "prefer": [49, 63, 99, 101, 146, 149, 158], "topo1d": 49, "1d_classic": [49, 118], "geo_data": [49, 64, 137, 151, 154], "rotation": 49, "geometr": [49, 154, 167], "spread": 49, "crater": 49, "endpoint": 49, "pole": 49, "ordinari": [49, 140], "Near": 49, "disturb": [49, 55], "decai": 49, "refocu": 49, "grid_data": 49, "grid_typ": 49, "te": 49, "nonuniform": [49, 71], "fname_celledg": 49, "nonuniform_grid_tool": 49, "make_mapc2p": 49, "deeper": [49, 142, 151, 162], "ocean_shelf_beach": 49, "topo_data": [49, 151], "topofile_path": 49, "dtopo_data": [49, 119, 151], "dtopofil": [49, 63, 75, 151], "dtopofile_path": 49, "mt": [49, 162], "okada_dtopo": 49, "dms2decim": 51, "decim": [51, 63], "dist_meters2latlong": 51, "dist_latlong2met": 51, "haversin": 51, "great": [51, 93, 118], "inv_haversin": 51, "invert": 51, "gctransect": [51, 118], "fetch_noaa_tide_data": 51, "predict": 51, "y0": 51, "bearing_unit": 51, "radian": 51, "beta": [51, 92, 104, 152], "sin": [51, 82], "longitudin": 51, "latitudin": 51, "coord": [51, 55], "negat": [51, 162], "30": [51, 55, 57, 115, 149, 151, 162], "51": 51, "span": [51, 55, 63], "station": [51, 143, 166], "begin_d": 51, "end_dat": 51, "time_zon": 51, "gmt": 51, "datum": [51, 52, 102, 143, 151, 166], "stnd": 51, "metric": 51, "cache_dir": 51, "begin": [51, 63, 94, 98, 102, 108, 141, 158], "op": 51, "api": [51, 127], "tidesandcurr": 51, "scratch": [51, 70, 108], "charact": 51, "datetim": [51, 158], "date_tim": 51, "ndarrai": [51, 92, 94, 102, 106, 158, 164], "water_level": 51, "preliminari": [51, 127, 166], "verifi": [51, 109, 116, 166], "rearth": 51, "6367500": 51, "pm": 51, "tohoku": 51, "crescent": 51, "citi": 51, "xtran": [51, 63], "ytran": [51, 63], "142": 51, "124": 51, "41": [51, 161], "74": [51, 55], "transect2kml": [51, 63], "kml": [51, 63, 123, 125, 126, 127, 130, 131, 142], "formula": [51, 68, 144], "stackexchang": 51, "1783746": 51, "rsphere": [51, 89], "believ": [52, 110, 125, 130], "real": [52, 59, 68, 109, 140, 166], "world": [52, 68, 96, 99, 158], "intend": [52, 89, 127], "approv": 52, "nhtmp": 52, "benchmark": 52, "nthmp": 52, "awar": [52, 99], "scenario": [52, 143], "invest": 52, "learn": [52, 93, 110], "geohazard": 52, "geoscientist": 52, "expert": 52, "cautiou": 52, "sensit": [52, 68], "confirm": 52, "imposs": [52, 148], "encapsul": 52, "knowledg": 52, "inaccuraci": 52, "uncertainti": [52, 68], "subduct": [52, 75], "zone": [52, 55, 63, 149, 150], "understood": 52, "turbul": [52, 104], "bore": 52, "inaccur": 52, "becom": [52, 107, 170], "agreement": 52, "caution": 52, "empir": [52, 68], "corioli": [52, 151, 156, 157], "littl": [52, 75, 97, 143], "coriolis_forc": [52, 151], "know": [52, 62, 66, 75, 86, 113, 126, 130, 132, 140, 143, 164, 165, 166], "upward": 52, "realiti": 52, "hard": [53, 58, 76, 82, 164], "disabl": [53, 97, 105, 151], "plain": 53, "mean_latitud": 53, "hash": [54, 58, 116], "print_git_statu": 54, "git_statu": 54, "power": [55, 60, 81], "georeferenc": 55, "simultan": [55, 125], "gi": [55, 125, 162], "critic": [55, 98, 140], "decis": 55, "nevertheless": 55, "lxml": 55, "pykml": 55, "conda": 55, "pyramid": 55, "geospati": 55, "abstract": 55, "osx": [55, 85], "macport": 55, "homebrew": [55, 85], "gdal_data": 55, "gc": 55, "cv": [55, 71], "epsg": 55, "wkt": 55, "georefer": 55, "warp": 55, "anaconda": [55, 105], "gdal_test": 55, "frame0005fig1": 55, "1440": 55, "1440p": 55, "1440l": 55, "frame0005fig1_tmp": 55, "vrt": 55, "band": [55, 164], "destin": 55, "100": [55, 75, 88, 91, 94, 103, 106, 108, 124, 127, 142, 152, 164], "receiv": [55, 116], "libgdal": 55, "dylib": 55, "liblzma": 55, "xz": 55, "setplot_fil": 55, "setplot_kml": 55, "chile_2010": 55, "slider": [55, 63], "panel": 55, "chile2010": [55, 114, 115, 119, 122, 128, 162], "kml_name": 55, "kml_starttim": 55, "utc": [55, 63], "kml_tz_offset": 55, "kml_index_fnam": 55, "_googleearth": 55, "kml_user_fil": 55, "santiago": 55, "kml_publish": 55, "kml_map_topo_to_latlong": 55, "sidebar": [55, 58], "kml_timezon": 55, "japan": [55, 63], "address": [55, 58, 125], "host": 55, "kml_xlimit": 55, "kml_ylimit": 55, "kml_use_figure_limit": 55, "member": [55, 101, 103, 108], "googleearth": [55, 63], "placemark": 55, "geograph": 55, "viewabl": [55, 91], "remain": [55, 62, 101, 109, 111, 119, 156, 157, 158], "use_for_kml": 55, "120": 55, "kml_use_for_initial_view": 55, "kml_figsiz": 55, "kml_dpi": [55, 63], "kml_tile_imag": 55, "longitude_min": 55, "longitude_max": 55, "latitude_min": 55, "latitude_max": 55, "camera": 55, "size_x_inch": 55, "size_y_inch": 55, "dpi": [55, 63], "pixel": [55, 63], "qualiti": [55, 131], "backend": 55, "furthermor": [55, 108], "pseudo": [55, 71], "height": [55, 102, 164], "transpar": [55, 63], "surface_or_depth": [55, 83], "cmin": [55, 63], "googleearth_transpar": 55, "kml_colorbar": 55, "cmax": [55, 63], "kml_build_colorbar": [55, 63], "alter": 55, "occupi": 55, "contourf": [55, 81], "googleearth_lightblu": 55, "googleearth_darkblu": 55, "appeal": 55, "overlaid": [55, 63], "ridg": 55, "lighter": 55, "darker": 55, "folder": 55, "hide": [55, 71], "unalt": 55, "map_topo_to_latlong": 55, "contan": 55, "referenc": [55, 138, 143, 162], "un": 55, "unzip": 55, "zipinfo": 55, "groundoverlai": 55, "edit": [55, 58, 59, 62, 84], "entri": [55, 64, 88, 98, 109, 158], "low": [55, 70, 89, 164, 166], "unapp": 55, "8x6": 55, "1600": [55, 77], "1200": 55, "notic": [55, 65, 86, 108, 116], "stripe": 55, "plaid": 55, "neither": [55, 63, 65, 86, 125], "evenli": [55, 98], "30x30": 55, "360x360": 55, "baselin": 55, "unaccept": 55, "sharper": [55, 63], "32768": 55, "accordingli": [55, 162], "subject": [55, 70, 115, 149, 151], "round": 55, "prevent": 55, "118": 55, "116": [55, 122], "18": [55, 102, 120, 121, 138], "rcl": 55, "1200x1680": 55, "overland": 55, "flood": [55, 70, 144], "topograph": 55, "longtitud": 55, "crucial": [55, 162], "assumpt": [55, 58], "48000": 55, "17540": 55, "map_cart_to_latlong": 55, "xc": [55, 108], "yc": 55, "topo_xlim": 55, "ge_xlim": 55, "111": [55, 125], "96132553": 55, "36256443": 55, "slope_x": 55, "xp": [55, 89], "topo_ylim": 55, "17500": 55, "ge_ylim": 55, "43": 55, "79453362": 55, "95123268": 55, "slope_i": 55, "yp": [55, 89], "teton": 55, "dam": [55, 144], "collabor": [55, 153], "weight": 55, "boisest": 55, "detect": [55, 66, 97, 105, 109, 165], "clawpack_gpu": 56, "cpp": 56, "cannot": [56, 62, 97, 132, 144, 158], "comparison": 56, "motlei": 56, "1029": 56, "2019ms001635": 56, "acceler": [56, 102], "arxiv": 56, "1808": 56, "02638": 56, "tree": [56, 62, 101, 146], "geo_gpu_pap": 56, "esri": [57, 162], "wikipedia": 57, "tell": [57, 77, 82, 88, 97, 111, 116], "llcorner": [57, 162, 164], "llcenter": [57, 162, 164], "xllcenter": [57, 127, 162], "yllcenter": [57, 127, 162], "nodatavalu": [57, 162], "3000": [57, 162], "4000": [57, 162], "xllcorner": [57, 162], "yllcorner": [57, 162], "smoothli": [57, 72], "our": [57, 67, 88, 113], "represent": [57, 94, 97, 103, 109, 164], "grid_registr": [57, 164], "crop": [57, 164], "coarsen": [57, 115, 127, 128, 149, 162, 164], "subsampl": [57, 162, 166], "coarsen_method": 57, "lon": [57, 162], "md": [58, 59, 127, 146], "intersphinx": 58, "documen": 58, "retir": 58, "conf": [58, 59], "mess": 58, "ff": [58, 63], "hasn": 58, "improperli": 58, "html_theme": 58, "_theme": 58, "flask_loc": 58, "_static": 58, "clawlogo": 58, "jpg": [58, 71], "logo": [58, 126], "clawicon": 58, "ico": 58, "icon": 58, "_templat": [58, 59], "literalinclud": 58, "setaux_default": 58, "rst": [58, 59, 130], "_build1": 58, "rebuilt": 58, "rebuild": 58, "multivers": 58, "sphinxcontrib": 58, "_build": 58, "smv_branch_whitelist": 58, "cp": [58, 59, 74], "fix_links_top_level": 58, "sphinx_web": 58, "decoupl": 58, "resid": [58, 66, 94], "remak": 58, "rsync": 58, "azv": 58, "extra_fil": 58, "cname": 58, "godaddi": 58, "verbatim": 58, "recurs": [58, 59, 74, 119], "rsync_clawpack": 58, "clawdev2013": 58, "redirect": 58, "an11": 58, "geoclawdev": 58, "clawdev": 58, "offici": [59, 85, 127], "subrepo": 59, "__init__": [59, 101, 111, 136], "1rc": 59, "rc": 59, "kentzo": 59, "prefix": [59, 91, 97, 98, 103], "gzip": [59, 97, 130], "draft": 59, "gz": [59, 61], "attach": [59, 97, 106], "upstream": 59, "repo": 59, "permiss": [59, 62, 65, 86], "trickeri": 59, "temp": 59, "mv": 59, "xf": 59, "python3": [59, 111, 126, 132, 137], "sdist": 59, "dist": 59, "xzf": [59, 61], "pkg": [59, 152], "cf": [59, 162], "upload": 59, "testpypi": 59, "twine": 59, "credenti": 59, "okai": 59, "pip3": 59, "uninstal": [59, 62, 111], "dir": [59, 99, 168], "820730": [59, 138], "changes_to_mast": 59, "release_5_x_x": 59, "5_x_x": 59, "installing_pip": 59, "installing_fortcod": 59, "docker_imag": 59, "ideal": [59, 102, 143], "sept": [59, 132], "regist": 60, "untar": 61, "pythonpath": [61, 62], "pypi": [62, 97], "think": [62, 68, 70, 72, 102], "clawpack_src": [62, 111], "egg": 62, "f2py": [62, 78, 89, 96, 101, 109, 140], "installing_opt": 62, "mechan": [62, 106, 138], "fc": [62, 89, 107, 109, 118, 165], "comfort": [62, 101], "claw_vers": 62, "wrong": [62, 67, 71, 98, 111], "pth": 62, "went": [62, 141], "overlai": [63, 133], "bgr": 63, "hex": [63, 82], "00ff00": 63, "yellow": [63, 82], "deg2dm": 63, "regions2kml": 63, "outlin": [63, 71, 84, 130, 140, 147], "box2kml": 63, "quad2kml": 63, "poly2kml": 63, "line2kml": 63, "gauges2kml": 63, "marker": 63, "topo2kml": 63, "dtopo2kml": 63, "fgmax2kml": [63, 130], "fgout2kml": 63, "make_input_data_kml": 63, "pcolorcells_for_kml": [63, 130], "pcolormesh": [63, 70], "png2kml": 63, "wrap": [63, 86, 89, 94, 104, 109, 158], "ge": 63, "topo2kmz": [63, 133], "kmz": [63, 125], "offshor": [63, 68, 70, 142, 144], "kml_header": 63, "kml_footer": 63, "kml_region": 63, "kml_gaug": 63, "kml_png": 63, "kml_cb": 63, "aabbggrr": 63, "dtopo_file_nam": 63, "8888ff": 63, "f2": 63, "num_digit": 63, "trail": 63, "NOT": [63, 65, 82, 86], "cb_filenam": 63, "close_fig": 63, "nrm": 63, "kml_timespan": 63, "event_tim": 63, "tz": 63, "tscale": 63, "timespan": 63, "27t06": 63, "00": [63, 77, 150], "03": [63, 102], "27t07": 63, "04": [63, 94, 102], "daylight": 63, "dst": 63, "timezon": 63, "magic": 63, "tabl": [63, 68, 81, 97], "wisdom": 63, "00ffff": 63, "png_filenam": 63, "dpc": 63, "max_inch": 63, "sharp": 63, "x_edg": [63, 142], "y_edg": [63, 142], "allot": 63, "smear": 63, "slowli": 63, "x_inch": 63, "y_inch": 63, "dcp": 63, "x_cell": 63, "y_cell": 63, "fig": [63, 142], "png_extent": 63, "savefig": [63, 135], "construc": 63, "png_file": 63, "png_name": 63, "radio_styl": 63, "cb_file": 63, "cb_name": 63, "cb_xfrac": 63, "cb_yfrac": 63, "radio": 63, "poli": 63, "max_vertices_in_descript": 63, "quad": 63, "region00": 63, "topo_file_nam": 63, "zlim": 63, "mask_outside_zlim": 63, "eas": [63, 136], "outsiz": 63, "pyplot": [63, 141, 164], "xg": 64, "yg": 64, "stationari": [64, 162], "huge": [64, 70, 144, 162], "frequenc": [64, 75, 104], "ug": 64, "vg": 64, "dt": [64, 89, 94, 98, 104, 118, 148, 150, 152, 162, 167], "euler": [64, 96, 104, 121, 123, 126, 128, 140, 167], "gtype": 64, "particle_tool": [64, 130], "opensourc": [65, 86], "copyright": [65, 86], "reserv": [65, 86], "redistribut": [65, 86], "permit": [65, 86], "retain": [65, 86, 97], "disclaim": [65, 86], "nor": [65, 86], "endors": [65, 86], "promot": [65, 86], "BY": [65, 86], "THE": [65, 86], "holder": [65, 86], "AND": [65, 86], "AS": [65, 86], "OR": [65, 86, 158], "impli": [65, 86, 151], "warranti": [65, 86], "BUT": [65, 86], "OF": [65, 86], "merchant": [65, 86], "fit": [65, 86], "FOR": [65, 86], "IN": [65, 86], "NO": [65, 86], "shall": [65, 86], "BE": [65, 82, 86], "liabl": [65, 86], "indirect": [65, 86], "incident": [65, 86], "exemplari": [65, 86], "consequenti": [65, 86], "procur": [65, 86], "substitut": [65, 86], "loss": [65, 86], "profit": [65, 86], "busi": [65, 86], "interrupt": [65, 86], "ON": [65, 82, 86], "strict": [65, 86], "tort": [65, 86], "neglig": [65, 76, 86, 151], "aris": [65, 86, 118], "IF": [65, 86, 151], "advis": [65, 86], "SUCH": [65, 86], "isn": [66, 76, 77, 165], "bomb": [66, 76], "abort": 66, "claw_outdir": [66, 82], "regener": 66, "safer": 66, "run1": 66, "suffix": [66, 164], "conlict": 66, "advection_1d_example1": 67, "classic_1d": 67, "exclud": 67, "exclude_modul": 67, "exclude_sourc": 67, "rp1_advect": 67, "lib": [67, 111], "common_sourc": 67, "bc1": [67, 109], "claw1ez": 67, "claw1": [67, 109], "copyq1": 67, "inlinelimit": 67, "opendatafil": 67, "out1": 67, "src1": [67, 157, 167, 170], "step1": 67, "wouldn": 67, "spite": [67, 70, 111], "bc1_inflow": 67, "matter": [67, 123], "_t": 68, "cdot": [68, 101, 142], "gamma": [68, 102], "frac": [68, 102, 108, 170], "gn": 68, "gravit": [68, 102, 151, 167], "rough": 68, "terrain": 68, "seab": 68, "025": [68, 151], "enhanc": [68, 86, 127], "threshold": 68, "friction_depth": [68, 151], "runup": 68, "discov": 68, "expon": 68, "arithmet": 68, "3333": 68, "d0": 68, "inadequaci": 68, "ztopo": 70, "pt_chosen": 70, "protect": [70, 130], "levi": [70, 130, 151], "unset": [70, 115], "geq0": 70, "force_dry_arrai": 70, "prev_pts_chosen": 70, "unchosen": 70, "converg": [70, 81], "pts_chosen": [70, 142], "touch": 70, "preserv": [70, 78, 104], "zmask": 70, "subtleti": 70, "ruledrectangle_covering_selected_point": [70, 142], "stretch": [70, 164], "farther": 70, "cmap_land": 70, "cmap_sea": 70, "cmap_topo": 70, "norm_topo": 70, "cmap_sea_dri": 70, "cultu": 70, "bai": [70, 143, 166], "183": 70, "89871": 70, "steep": [70, 170], "fist": 70, "1e6": 70, "arbitrarili": 70, "06": [70, 151], "84800": 70, "augment": [70, 141], "163": 70, "94297": 70, "pts_chosen_shallow": 70, "177": 70, "249577": 70, "zshallow": 70, "pts_chosen_nearshor": 70, "znearshor": 70, "compact": [70, 162], "fname_fgmax_mask": 70, "fgmax_pts_topostyl": 70, "topo_fgmax_mask": 70, "fewer": [70, 115, 164], "121": [70, 142], "pad": 70, "xv": [70, 142], "yv": [70, 142], "925": 70, "965": 70, "69788": 70, "76005": 70, "barrier": [70, 109], "mathwork": 71, "manifold": 71, "isosurfac": 71, "border": [71, 167], "cube": 71, "matlabpath": 71, "perman": [71, 118, 130, 131, 132, 133, 134, 135, 136, 137], "pathtool": 71, "q0001": 71, "t0001": 71, "enter": [71, 97, 99, 105], "plotclaw1": 71, "plotclaw2": 71, "plotclaw3": 71, "_": [71, 82, 101, 102, 113, 164, 170], "setplot2": 71, "ye": 71, "success": [71, 103, 164, 167], "0625": 71, "keyboard": 71, "redraw": [71, 84], "setplot1": 71, "setplot3": 71, "Such": 71, "rho": [71, 102, 108, 150], "rhou": 71, "rhov": 71, "outputdir": 71, "plottyp": 71, "mq": 71, "uservari": 71, "uservariablefil": 71, "temporarili": 71, "encourag": 71, "daspect": 71, "showpatchbord": 71, "showgridlin": 71, "gridlin": 71, "drawcontourlin": 71, "caxi": 71, "shg": 71, "fstr": 71, "framenam": 71, "frame0000": 71, "dpng": 71, "aftergrid": 71, "topic": 71, "clawgraph": 71, "t0002": 71, "doubl": [71, 89, 94, 109, 140, 149], "xxxx": 71, "unpredict": 71, "clash": 71, "strongli": [71, 110], "overridden": [71, 104, 106], "nearbi": [72, 143], "delta": [72, 92, 94, 101, 104, 140, 164, 167, 170], "polynomi": [72, 140], "a_0": 72, "a_1x": 72, "a_2i": 72, "a_3xi": 72, "greatest": [72, 115], "midpoint": [72, 94], "conclud": 72, "intact": [74, 124], "newdir": 74, "moreov": 75, "superposit": 75, "halfspac": 75, "rock": 75, "km": [75, 143], "shallowest": 75, "orient": [75, 89], "downward": 75, "counterclockwis": 75, "hang": 75, "foot": 75, "closer": [75, 150], "instati": [75, 164], "450": 75, "e3": 75, "104": 75, "668": 75, "826": 75, "chile_dtopo": 75, "tt3": [75, 164], "arcminut": [75, 162], "simplifi": [75, 81, 82, 97, 116, 126, 127, 167], "recangl": 75, "translat": 75, "homogen": [75, 104, 167, 170], "steadi": [75, 162], "rare": [75, 125], "flat": 75, "isotrop": 75, "justifi": 75, "poisson": 75, "triangl": 75, "multicor": [76, 125], "stack": [76, 85, 123, 142], "omp_stacks": 76, "16m": 76, "ulimit": 76, "unlimit": [76, 97], "mac": [76, 85, 107, 116, 146], "max1d": [76, 130, 149], "amr_modul": [76, 115, 123, 129, 130], "somewhat": [76, 81, 115, 116, 125, 148], "safe": 76, "output_styl": [77, 88, 91, 98, 135, 139, 148, 150, 152], "output_t0": [77, 136, 139, 148, 150, 152], "elif": [77, 150, 152], "output_tim": [77, 98, 139, 148, 150], "1800": 77, "7200": 77, "iout": [77, 152], "timestep": [77, 91, 98, 124, 126, 148, 150, 152, 158], "ntot": [77, 152], "output_step_interv": [77, 148, 150, 152], "total_step": [77, 148, 150, 152], "postprocess": [77, 98], "editor": 77, "valout": [77, 127, 130, 136, 161], "40000000e": 77, "ngrid": 77, "naux": 77, "nghost": 77, "preceed": [77, 167], "grid_numb": 77, "00000000e": 77, "xlow": 77, "ylow": 77, "25000000e": 77, "former": [77, 82, 167], "cut": [77, 149], "b0002": 77, "decompos": [77, 140, 170], "contigu": [77, 97, 106, 142], "output_aux_compon": [77, 148, 150, 152], "axxxx": [77, 97], "output_aux_onlyonc": [77, 148, 150, 152], "reli": [78, 89, 100, 110, 125], "weno": [78, 96, 104], "rk": [78, 104], "cake": 79, "belki": 79, "shoot": [81, 96], "favorit": 81, "hood": [81, 96], "task": 81, "phoni": 82, "plotexampl": 82, "acou": 82, "add_true_solut": 82, "qtrue": 82, "add_titl": 82, "4e": 82, "iplotclaw_": 82, "plotloop": [82, 84], "mid": 82, "stream": 82, "inherit": [82, 94, 104], "belong": [82, 94, 99, 103, 106], "getcwd": 82, "_output2": [82, 84], "plu": [82, 119, 150, 152, 164], "duplic": [82, 122, 136, 139], "wider": 82, "preced": 82, "pinkfig": 82, "acquir": 82, "get_cmap": 82, "fade": 82, "yellow_red_blu": 82, "ffff00": 82, "rgb": 82, "predefin": 82, "showcolor": 82, "call_setplot": 82, "inadvertantli": 82, "resetplot": [82, 84], "spot": 82, "exam": 82, "pd": [82, 84], "attributeerror": 82, "traceback": 82, "new_plotfgur": 82, "mi": 82, "spell": 82, "debugg": 82, "pdb": 82, "ipdb": 82, "plot_topo_fil": [83, 123], "replot": 84, "vi": [84, 91], "recomput": [84, 88, 120, 129], "my_setplot_fil": 84, "xcode": 85, "python2": [85, 132, 137], "brew": 85, "maco": 85, "scipysuperpack": 85, "pypa": 85, "en": 85, "upgrad": 85, "Their": 86, "appreci": 86, "surviv": 86, "alphabet": 86, "programmat": 86, "petclaw": [86, 99, 100, 101, 103, 109, 111, 116], "jed": 86, "brown": [86, 164], "ondrej": 86, "lisandro": 86, "dalcin": 86, "pyweno": [86, 104], "mainten": 86, "interleav": [86, 102], "kristof": 86, "unterweg": 86, "peanoclaw": 86, "chanc": 86, "reprint": 86, "inhabit": 88, "sigma": 88, "omega": 88, "meshgrid": [88, 101, 142, 164], "exp": [88, 98, 108], "cosin": 88, "imped": [88, 102, 108], "problem_data": [88, 102, 103, 106, 108, 141], "cparam": [88, 106], "set_cparam": [88, 106], "sol": 88, "readi": [88, 89, 91, 105], "clawsolver1d": [88, 91, 94, 104, 108, 140], "bc": [88, 95, 101, 108, 150, 152, 161], "pick": [88, 104], "rp": 88, "acoustics_1d": [88, 96, 102, 108], "decid": [88, 104], "my_rp_modul": 88, "my_acoustics_rp": 88, "tvd": [88, 94, 104, 170], "vanleer": [88, 104, 148, 150, 152], "evolve_to_tim": [88, 104], "keep_copi": [88, 91, 98], "behaviour": 88, "count": 88, "count_from_zero": 88, "write_aux_init": [88, 91], "write_aux_alwai": [88, 91, 98], "compute_p": [88, 91], "accept": [88, 98, 104, 148], "stress": [88, 98], "mp": [88, 98, 106], "clawdata2pyclaw": 89, "aid": 89, "therefor": [89, 99, 127, 162], "reutil": 89, "inde": [89, 99], "computation": [89, 104], "intens": 89, "shallow_spher": [89, 116, 141], "heavili": 89, "succesfulli": 89, "initialize_sourc": 89, "src2": [89, 136, 154, 157, 167], "distutil": [89, 137], "dummi": [89, 104, 167], "queri": [89, 94, 109], "namespac": 89, "docstr": [89, 93, 116], "zp": 89, "num_ghost": [89, 94, 97, 101, 102, 104, 106, 140, 148, 150, 152], "dxc": 89, "dyc": 89, "intent": [89, 140], "cf2py": 89, "multidimension": [89, 96], "fortran_src_wrapp": 89, "xlowerg": 89, "ylowerg": 89, "whith": 89, "hoc": 89, "step2": 89, "step2qcor": 89, "qcor": 89, "two_d_classic_sourc": 89, "flux2": 89, "philim": 89, "output_filenam": 89, "input_filenam": 89, "sagemathcloud": 90, "sagemath": 90, "termin": [90, 146, 148, 149], "my_solv": 91, "my_initial_solut": 91, "entireti": 91, "check_valid": 91, "tradit": [91, 97], "run_data": 91, "f_file_nam": [91, 98], "f_path": 91, "compute_f": [91, 98], "densiti": [91, 98, 102, 106, 108, 149, 150, 167], "file_prefix_p": 91, "prepend": 91, "nstepout": [91, 98], "out_tim": 91, "outdir_p": 91, "output_file_prefix": [91, 98], "_pyclaw_io": 91, "output_opt": 91, "runmak": 91, "xdir": 91, "xclawcmd": 91, "savecod": 91, "viewable_attribut": 91, "cygwin": 91, "xclawerr": 91, "xclawout": 91, "dtdx": 92, "act": [92, 164], "num_wav": [92, 102, 140, 148, 150, 152], "07": [92, 102, 161], "minmod": [92, 94, 104, 148, 150, 152], "minmod_limit": 92, "superbe": [92, 148, 150, 152], "superbee_limit": 92, "van": [92, 104, 148, 150, 152], "leer": [92, 104, 148, 150, 152], "mc": [92, 99, 148, 150, 152], "mc_limit": 92, "beam": 92, "warm": 92, "frommm": 92, "albada": 92, "klein": 92, "sharpen": 92, "van_leer_klein_sharpening_limit": 92, "roe": [92, 102, 132, 140], "scheme": [92, 102], "arora": 92, "arora_ro": 92, "theta": 92, "95": [92, 105], "safeti": 92, "theta_limit": 92, "ultrabe": 92, "cfl_superbe": 92, "cfl_superbee_theta": 92, "beta_limit": 92, "hyperbe": 92, "hyperbee_limit": 92, "superpow": 92, "superpower_limit": 92, "cada": 92, "torrilhon": 92, "cada_torrilhon_limit": 92, "cada_torrilhon_limiter_nonlinear": 92, "1st": [92, 104, 148, 150, 152, 167], "upper_bound_limit": 92, "friedemann": 92, "kemm": 92, "kemm_2009": 92, "08": [92, 94, 161], "depdend": 92, "6666666666666666": 92, "epsilon": 92, "caut": 92, "use_petsc": [93, 99], "solver_typ": [93, 104], "shouldn": 93, "htmlplot": 93, "acoustics_1d_homogen": [93, 116], "love": [93, 140], "nearli": 94, "arg": [94, 103], "patch_index": 94, "add_dimens": 94, "get_dim_attribut": 94, "attr": [94, 103], "lower_glob": 94, "num_cells_glob": 94, "upper_glob": 94, "node": [94, 127], "unmap": 94, "set_printopt": 94, "doctest": 94, "roundoff": 94, "c_center": 94, "p_node": 94, "grid1d": 94, "c_centers_with_ghost": 94, "lambda": [94, 164], "xarr": 94, "p_center": [94, 108], "49": [94, 164], "81": [94, 142, 151], "add_gaug": [94, 98], "gauge_coord": 94, "ind": 94, "c_nodes_with_ghost": 94, "mark_nod": 94, "mark_cent": 94, "setup_gauge_fil": 94, "_compute_c_cent": 94, "c_node": 94, "_compute_c_nod": 94, "gauge_dir_nam": 94, "gauge_file_nam": 94, "gauge_fil": 94, "_compute_p_cent": 94, "_compute_p_nod": 94, "on_lower_boundari": 94, "on_upper_boundari": 94, "995": 94, "101": [94, 161], "centers_with_ghost": 94, "ndarrari": 94, "nodes_with_ghost": 94, "geom": [94, 106], "clawsolver2d": [94, 104], "dimensional_split": [94, 123, 148, 150, 152], "strang": [94, 104, 148, 150, 152, 167], "enabl": [94, 97, 98, 105, 109, 125], "unsplit": [94, 148, 150, 152], "transverse_wav": [94, 148, 150, 152], "no_tran": 94, "trans_inc": 94, "trans_cor": 94, "mthlim": [94, 104], "famili": [94, 104, 150, 152], "enumer": [94, 104], "lax": [94, 104, 148, 150, 152, 170], "wendroff": [94, 104, 148, 150, 152, 170], "source_split": [94, 104, 148, 150, 152, 167], "fwave": [94, 102, 104, 140], "step_sourc": [94, 101, 104], "kernel_languag": [94, 104, 109, 116], "callabl": [96, 109], "precompil": 96, "massiv": 96, "biggest": 96, "supercomput": [96, 98, 99], "rung": [96, 104], "kutta": [96, 104], "intuit": 96, "guidelin": 96, "pyflak": 96, "pylint": 96, "coverag": [96, 116], "advection_1d": [96, 102], "burger": [96, 140, 167], "burgers_1d": [96, 102], "euler_exact_1d": [96, 102], "euler_hll_1d": [96, 102], "euler_hllc_1d": [96, 102], "euler_roe_1d": [96, 102], "shallow_exact_1d": [96, 102], "shallow_fwave_1d": [96, 102, 141], "shallow_hll_1d": [96, 102, 141], "shallow_roe_1d": [96, 102, 141], "2nd": [96, 101, 104, 148, 150, 152, 167], "leveque1997": 96, "32": [97, 99, 107, 149], "netcdf3": 97, "netcdf4": [97, 162, 164], "read_": [97, 103], "write_": 97, "write_aux": [97, 103], "thoroughli": 97, "read_aux": [97, 103], "txxxx": 97, "qxxxx": 97, "read_arrai": 97, "num_var": 97, "read_patch_head": 97, "read_t": 97, "nstate": 97, "write_p": [97, 103], "write_arrai": 97, "why": 97, "bxxxx": 97, "h5py": 97, "pytabl": 97, "moin": 97, "whichev": 97, "wrapper": [97, 164], "hdfgroup": 97, "obtain5": 97, "lzf": 97, "szip": 97, "dataset": [97, 162, 164, 166], "deflat": 97, "compression_opt": 97, "filter": [97, 164], "legal": 97, "ec": 97, "nn": 97, "chunk": 97, "guess": 97, "shuffl": 97, "fletcher32": 97, "pupyner": 97, "effort": 97, "unidata": 97, "ucar": 97, "17": [97, 125, 126, 138, 167], "netcdf3_class": 97, "netcdf3_64bit": 97, "netcdf4_class": 97, "clobber": [97, 124], "zlib": 97, "complevel": 97, "fastest": [97, 105], "poorest": 97, "slowest": 97, "checksum": 97, "trigger": 97, "chunksiz": 97, "hdf": 97, "least_significant_digit": 97, "quantiz": 97, "lossi": 97, "significantli": [97, 127], "endian": 97, "big": 97, "nativ": 97, "gain": 97, "ness": 97, "_fillvalu": 97, "silent": 97, "customari": 98, "_outdir": 98, "hdf5": 98, "write_aux_int": 98, "energi": [98, 102], "trace": 98, "p_function": 98, "absolut": [98, 115, 116, 127, 149, 150], "mf": [98, 106], "elementwis": 98, "total_energi": 98, "tidal": [98, 143], "whenc": 98, "compute_gauge_valu": 98, "sent": [98, 106], "logger": [98, 106], "interac": 98, "silenc": 98, "gone": 98, "reject": [98, 104, 148], "problemat": 98, "shaheen": 98, "getlogg": 98, "setlevel": 98, "desktop": 99, "mainli": 99, "mpirun": [99, 105, 116], "ll": [99, 108], "toolkit": [99, 168], "petsc4pi": [99, 105, 106, 116], "mercuri": 99, "anl": 99, "hg": 99, "bitbucket": 99, "buildsystem": 99, "config": 99, "zsh": 99, "architectur": 99, "csh": 99, "tcsh": 99, "setenv": 99, "cc": [99, 102, 108], "gcc": [99, 105], "cxx": 99, "mpich": 99, "phase": [99, 110, 124, 130, 149], "googlecod": 99, "iinstal": 99, "cython": 99, "demo": 99, "petsc_hello_world": 99, "hello": 99, "easy_instal": 99, "serial": [99, 103, 109, 161], "certainli": 99, "importantli": 99, "ng": 99, "lowerg": 99, "addition": [99, 158], "excerpt": 99, "320": 99, "partit": 99, "html_plot": 100, "interactive_plot": [100, 108], "3rd": [101, 104, 141], "user_bc_low": 101, "custom_bc": 101, "dim": [101, 102, 104], "qbc": [101, 104, 106], "xrang": 101, "aux_bc_low": 101, "aux_bc_upp": 101, "auxbc": [101, 104, 106], "damiansra": 101, "empyclaw": 101, "maxwell_1d_homogen": 101, "mail": [101, 107], "worthwhil": 101, "impati": 101, "reaction": 101, "diffus": 101, "psi": [101, 167, 170], "dq_src": [101, 104], "shockbubbl": 101, "rp_sourc": 101, "rp_": 102, "q_l": [102, 140, 141], "q_r": [102, 140, 141], "aux_l": [102, 140], "aux_r": [102, 140], "oft": 102, "he": 102, "miscellan": 102, "amdq": [102, 140], "fluctuat": [102, 104, 170], "apdq": [102, 140], "ith": 102, "leveque_book_2002": 102, "matrix": 102, "acoustics_1d_pi": 102, "zz": [102, 108], "advection_1d_pi": 102, "u_t": [102, 108], "burgers_1d_pi": 102, "efix": [102, 141], "entropi": [102, 141], "euler_1d_pi": 102, "exact": 102, "hll": 102, "w_1": 102, "q_hat": 102, "s_1": [102, 142], "u_l": [102, 141], "c_l": 102, "lambda_roe_1": 102, "lambda_roe_2": 102, "w_2": 102, "s_2": [102, 142], "u_r": [102, 141], "c_r": 102, "heat": 102, "gamma1": 102, "hllc": 102, "q_hat_l": 102, "q_hat_r": 102, "s_m": 102, "w_3": 102, "s_3": 102, "p_r": 102, "p_l": 102, "rho_l": 102, "s_l": 102, "rho_r": 102, "s_r": 102, "e_l": 102, "e_r": 102, "aug_glob": 102, "26": [102, 135, 136, 138], "calucl": 102, "newton": 102, "shallow_1d_pi": [102, 141], "wari": 102, "grav": [102, 141], "dry_toler": 102, "ubar": 102, "h_l": [102, 141], "h_r": [102, 141], "cbar": [102, 164], "a1": 102, "delta_hu": 102, "delta_h": 102, "a2": 102, "karg": 103, "reachabl": 103, "truli": 103, "capa": 103, "is_valid": [103, 106], "ioerror": 103, "unsuccess": 103, "signitur": 103, "set_all_st": 103, "Will": 103, "start_fram": 103, "acoustics_2d": 104, "sharpclawsolver2d": 104, "expens": [104, 115, 120, 125], "galerkin": 104, "instantan": 104, "bubbl": 104, "clawsolv": [104, 140], "sharpclawsolv": 104, "superclass": 104, "t_end": 104, "sharpclawsolver1d": 104, "riemann_solv": 104, "claw_packag": 104, "sharpclawnd": 104, "semi": 104, "discret": 104, "dq": [104, 162], "ought": 104, "molsolv": 104, "lim_typ": 104, "weno_ord": 104, "17th": 104, "time_integr": 104, "ssp33": 104, "strong": [104, 110], "shu": 104, "osher": 104, "ssp104": 104, "4th": 104, "ssplmm32": 104, "multistep": 104, "ssplmm43": 104, "ssprk22": 104, "butcher": 104, "lmm": 104, "char_decomp": 104, "characterist": 104, "transmiss": 104, "tfluct_solv": 104, "tfluct": 104, "default_tfluct": 104, "aux_time_dep": 104, "cfl_desir": [104, 148, 150, 152], "cfl_max": [104, 148, 150, 152], "call_before_step_each_stag": 104, "before_step": 104, "stage": [104, 143, 144, 162, 164], "accept_reject_step": 104, "check_3rd_ord_cond": 104, "step_index": 104, "dtfe": 104, "ssplmm": 104, "posteriori": 104, "violat": [104, 164], "muct": 104, "dqdt": 104, "get_dt_new": 104, "take_one_step": 104, "update_saved_valu": 104, "check_lmm_cond": 104, "0001": 104, "max_step": 104, "500": [104, 149, 152], "get_dt": 104, "succeed": 104, "step_hyperbol": 104, "my_custom_bc": 104, "soon": 104, "bc_arrai": 104, "difficulti": [105, 107, 111], "modern": [105, 118, 127, 140], "gnu": 105, "ibm": 105, "xlf": 105, "wiki": 105, "gfortranbinari": 105, "ce": 105, "enthought": [105, 107], "canopi": 105, "live": 106, "constructor": 106, "get_aux_glob": 106, "get_auxbc_from_aux": 106, "get_q_glob": 106, "get_qbc_from_q": 106, "set_aux_from_auxbc": 106, "fortran_modul": 106, "seem": [106, 111, 130, 147, 154], "fragil": 106, "interdepend": 106, "set_num_ghost": 106, "set_q_from_qbc": 106, "gauge_data": 106, "keep_gaug": 106, "hack": 106, "stencil_width": 106, "da": 106, "stencil": 106, "worth": 106, "temporari": 106, "processor": 106, "fset": 106, "consult": 107, "g77": 107, "undefin": 107, "bash_profil": [107, 146], "academ": 107, "epd": 107, "ordinarili": 107, "kappa": [108, 170], "eqnarrai": 108, "p_t": 108, "u_x": 108, "p_x": 108, "tipe": 108, "haven": [108, 110], "deepli": 108, "acquaint": 108, "framecount": 109, "counter": [109, 164], "get_count": 109, "reset_count": 109, "set_count": 109, "new_frame_num": 109, "verifyerror": 109, "add_parent_doc": 109, "check_diff": [109, 116], "abstol": 109, "reltol": 109, "compile_librari": 109, "source_list": 109, "module_nam": 109, "interface_funct": 109, "local_path": 109, "library_path": 109, "f2py_flag": 109, "ioexcept": 109, "f95": 109, "lgomp": 109, "o3": 109, "funrol": 109, "finlin": 109, "fdefault": 109, "construct_function_handl": 109, "function_nam": 109, "func": [109, 158], "convert_fort_double_to_float": 109, "0d0": 109, "gen_vari": [109, 116], "disable_petsc": 109, "runnabl": 109, "kernel": 109, "against": [109, 116, 124, 160], "test_app": [109, 116], "unrecogn": 109, "read_data_lin": 109, "inputfil": [109, 164], "num_entri": 109, "data_typ": 109, "run_app_from_main": 109, "run_seri": 109, "fun": 109, "decor": 109, "comm_world": 109, "check_valu": [109, 116], "januari": [110, 117, 125, 138], "ceas": 110, "python3stat": 110, "howto": 110, "pyport": 110, "bewar": [111, 164], "__file__": 111, "subpackag": 111, "_subpackag": 111, "forestclaw": [111, 123], "getusersitepackag": 111, "getsitepackag": 111, "bad": [111, 116], "harm": 111, "drawback": 111, "cmdline": 111, "echo": 111, "perturb": [112, 151, 162], "workshop": [113, 130], "ik": 113, "basin": 113, "distant": [113, 115], "parameter": [113, 127, 142, 151, 158, 159], "_surge_modul": 113, "workflow": [113, 153, 158], "concentr": 113, "hurrican": [113, 158], "katrina": 113, "directorti": 113, "orlean": 113, "atcf": [113, 127, 158, 159], "chile2010b": 114, "topotools_exampl": [114, 164], "regrid_interv": [115, 149, 150], "surround": [115, 164], "escap": [115, 150], "regrid_buffer_width": [115, 149, 150], "tradeoff": 115, "clustering_cutoff": [115, 149, 150], "amrnez": 115, "undivid": 115, "q_": [115, 140, 170], "divid": [115, 148], "exceed": [115, 127], "largest": [115, 143], "suppli": [115, 158, 167, 170], "constrain": 115, "forbidden": 115, "amrflag": 115, "doflag": 115, "dontflag": 115, "adjoint_flag": 115, "tolsp": 115, "errest": 115, "anywher": 115, "wave_toler": [115, 151], "perfom": 116, "yml": 116, "_output_old": 116, "_output_new": 116, "xxdiff": 116, "opendiff": 116, "_plots_old": 116, "_plots_new": 116, "discoveri": 116, "supplementari": 116, "prime": 116, "stdout": 116, "spawn": 116, "occasion": [116, 125], "failur": [116, 128, 144], "acoustics_3d_vari": 116, "combinatori": 116, "test_acoust": 116, "comprehens": 116, "test_shallow_spher": 116, "meson": [118, 137], "sphere_sourc": [118, 136, 137, 154], "checkpt_styl": [118, 124, 139, 148, 150], "granular": 118, "clawpack_tan": 118, "imshow_norm": 118, "imshow_alpha": 118, "facet": 118, "mpeg": 118, "movi": 118, "ffmpeg": 118, "mp4_movi": 118, "movie_fign": 118, "mp4": 118, "jsanim": [118, 119, 123, 135], "gif": 118, "movie_name_prefix": 118, "chile2010_": 118, "movie_": 118, "chile2010_fign": 118, "kill": 118, "enddo": [118, 167], "storag": [118, 124, 132], "topo_modul": 118, "ntogo": 118, "di": [118, 119], "cleanup": [118, 126], "ipython_displai": 119, "underflow": 119, "nest": [119, 125, 149, 150], "refactor": [119, 120, 121, 123, 125, 126, 128, 132], "geolib": [119, 123], "dtopo_modul": 119, "movetopo": 119, "cellgridintegr": 119, "topo_upd": 119, "cellgridintegrate2": 119, "dt_max_dtopo": [119, 151], "dt_initi": [119, 148, 150, 151, 152], "juli": [120, 121, 138], "nohup": 120, "recalcul": 120, "unnecessarili": 120, "clamshel": 120, "test_topotool": [120, 164], "octob": [121, 122, 123, 129, 130, 133, 134, 136, 137, 138], "dtdx1d": 121, "dtdy1d": 121, "jsanimation_frametool": 121, "rpn2_vc_advect": 121, "dtdtopo": 122, "refinementdata": 122, "ticklabel": 122, "114": 122, "didn": 122, "glitch": 122, "nbtool": 123, "formerli": 123, "makefile_kml": 123, "extran": 123, "compare_gaug": 123, "topoplotdata": 123, "favor": [123, 127, 137, 149, 164], "riemann_tool": [123, 141], "amrlib": 123, "dumpgaug": 123, "stepgrid_dimsplit": 123, "step2x": 123, "step2i": 123, "flux2_dimsplit": 123, "step3x": 123, "step3i": 123, "step3z": 123, "flux3_dimsplit": 123, "advection_3d_swirl": [123, 161], "advection_2d_inflow": 123, "allocat": 123, "igetsp": 123, "holland_storm_modul": 123, "stommel_storm_modul": 123, "constant_storm_modul": 123, "storm_modul": 123, "friction_modul": 123, "geoclaw_modul": 123, "consolid": 123, "amr_data_show": 124, "datadir": 124, "riemann_interact": 124, "nbviewer": 124, "maojr": 124, "ipynotebook": 124, "blob": [124, 141], "interactive_test": 124, "unstabl": 124, "guard": 124, "crash": [124, 148, 149], "chk00100": 124, "tck00100": 124, "chkaaaaa": 124, "tckaaaaa": 124, "chkbbbbb": 124, "tckbbbbb": 124, "tck": 124, "chk": 124, "flush": 124, "lose": 124, "unneed": 124, "spend": 124, "inconsist": 124, "__future__": 125, "absolute_import": 125, "print_funct": 125, "capabilit": 125, "num_proc": 125, "coupl": [125, 170], "instabl": [125, 132], "transon": 125, "insidi": 125, "enlarg": 125, "june": [126, 127, 128, 129, 138], "woodward": 126, "collela": 126, "blast": 126, "219": 126, "legend_tool": 126, "legend": [126, 142], "riemann_aug_jcp": 126, "geoclaw_riemann_util": 126, "challeng": 126, "timer": 126, "gradient": [126, 170], "xllower": 127, "yllower": 127, "capabili": 127, "landfal": 127, "highli": [127, 144], "code_of_conduct": 127, "conduct": 127, "plot_timing_stat": [127, 129], "226": 127, "cumul": 127, "maxgr": 127, "rnode": 127, "listofgrid": 127, "10000": [127, 164], "resiz": 127, "10k": 127, "bndlist": 127, "amr_2d": [127, 128], "nodal": 127, "owner": 127, "lookup": 127, "rearrang": 127, "303": 127, "capabilti": 127, "hurdat": [127, 158, 159], "jma": [127, 158, 159], "ibtrac": [127, 158], "tcvital": [127, 158, 159], "wind": [127, 151, 158, 159, 164], "holland": [127, 151, 159], "1980": [127, 151, 159], "stub": 127, "establis": 127, "hwrf": [127, 151, 159], "mimic": 127, "test_etopo1": [127, 162], "etopotool": [127, 162], "etopo1": [127, 142, 143, 162, 164, 166], "gave": 127, "incorrect": [127, 128, 144, 158], "308": 127, "287": 127, "hlle": 128, "adjoint_modul": 128, "amr_1d": 128, "adjointsup_modul": 128, "robustli": 128, "maketopo": [128, 162], "typo": 128, "subprocess": 129, "staff": 129, "timing_plot": 129, "mhd": 129, "faster": [129, 130, 132, 164], "clearer": [129, 132, 133], "topo_miss": 129, "bowl": 129, "slosh": 129, "3764278": [130, 138], "among": 130, "bzip2": 130, "unpack": 130, "get_remote_fil": [130, 164], "notebook_html": 130, "nbconvert": 130, "animation_tool": [130, 131], "ride": 130, "skip_patches_outside_xylimit": [130, 132], "ruled_rectangl": 130, "lagrangian_gaug": 130, "million": 130, "set_eta_init": [130, 144], "subsid": [130, 144, 151], "uplift": [130, 144, 151], "septemb": [131, 138], "weren": 131, "verbosity_regrid": [131, 149, 150], "2021": [132, 133, 134, 135, 138], "4503024": [132, 138], "memsiz": [132, 149], "implicitli": [132, 151], "rpt2_geoclaw": [132, 141], "unnecessari": 132, "prepc": 132, "thought": [132, 143], "advertis": 132, "topotyp": [132, 151, 162], "5595424": [133, 138], "rp1_shallow_hl": 133, "geotiff": 133, "decemb": [134, 135, 138], "5781749": [134, 138], "segment": [134, 142], "2022": [135, 136, 138], "7026045": [135, 138], "trucat": 135, "svg": 135, "pcolor_kwarg": 135, "286": 135, "to_jshtml": 135, "8400237": [136, 138], "claw_python": 136, "pytest": 136, "add_attribut": 136, "cmd": 136, "fgmax_fin": 136, "fgmaxdata": 136, "compabl": 136, "xxx": [137, 162], "redon": 137, "fixed_grid_data": 137, "tba": 138, "10076317": 138, "3528429": 138, "3237295": 138, "1405834": 138, "262111": 138, "50982": 138, "tchknnnnn": 139, "chknnnnn": [139, 148, 150, 152], "nnnnn": [139, 148], "containt": 139, "restart_fil": [139, 148, 150, 152], "commenc": 139, "undesir": 139, "fashion": 139, "traffic": [140, 167], "rp1": [140, 170], "maxm": 140, "ql": 140, "qr": 140, "auxl": 140, "auxr": 140, "mwave": 140, "q_i": [140, 170], "x_": [140, 170], "ell": 140, "cal": [140, 167, 170], "p_": [140, 170], "_ptwise": 140, "rp1_ptwise": 140, "rpn2_ptwise": 140, "rpt2_ptwise": 140, "har": 140, "x_i": [140, 167, 170], "jacobian": [140, 170], "use_fwav": [140, 148, 150, 152], "my_riemann_solv": 140, "solver_nam": 140, "sole": 140, "bmatrix": 141, "graviti": [141, 151], "rp1_shallow_roe_with_efix": 141, "shallow_roe_with_efix_1d": 141, "shallow_1d": 141, "dam_break": 141, "passiv": 141, "rp1_shallow_roe_trac": 141, "shallow_roe_tracer_1d": 141, "shallow_trac": 141, "rp1_shallow_bathymetry_fwav": 141, "shallow_bathymetry_fwave_1d": 141, "sill": 141, "rpn2_shallow_roe_with_efix": 141, "rpt2_shallow_roe_with_efix": 141, "shallow_roe_with_efix_2d": 141, "shallow_2d": 141, "radial_dam_break": 141, "rpn2_shallow_bathymetry_fwav": 141, "shallow_bathymetry_fwave_2d": 141, "rpn2_shallow_spher": 141, "rpt2_shallow_spher": 141, "shallow_sphere_2d": 141, "rossby_wav": 141, "costli": 141, "rpn2_geoclaw": 141, "sw_aug_2d": 141, "rpn2_sw_aug": 141, "reval": 141, "riemann_solut": 141, "plot_phas": 141, "inclus": 142, "union": [142, 162], "y_": 142, "scriptstyl": 142, "x_c": 142, "y_c": 142, "ldot": 142, "unequ": 142, "vstack": 142, "31": 142, "zm": 142, "rrzigzag": 142, "rr2": 142, "readlin": 142, "strip": [142, 164], "nrule": 142, "000000000": 142, "admiralti": 142, "inlet": 142, "kitsap": 142, "peninsula": 142, "strait": 142, "juan": 142, "fuca": 142, "ruledrectangle_admiraltyinlet": 142, "400": 142, "851": 142, "529": 142, "036": 142, "578": 142, "577": 142, "187": 142, "623": 142, "191": 142, "684": 142, "221": 142, "755": 142, "rr_admiralti": 142, "rr_name": 142, "compactli": 142, "enforc": 142, "x_center": 142, "y_center": 142, "logical_or": 142, "edgecolor": 142, "dark": 142, "loc": [142, 164], "129": 142, "degener": 142, "vancouv": 142, "shoal": 142, "inundataion": [143, 166], "relief": [143, 166], "msl": [143, 166], "hilo": [143, 166], "feet": [143, 166], "arc": 143, "presum": 143, "vastli": 143, "fall": [143, 151], "mhhw": 143, "astronom": 143, "aht": 143, "worst": 143, "spacial": 144, "variable_eta_init": [144, 151], "nearfield": 144, "steepli": 144, "siesmic": 144, "eta_init": 144, "ever": [147, 151], "ff9999": 147, "claw_pkg": [148, 149, 150, 151, 152], "analog": [148, 149], "capa_index": [148, 150, 152], "dt_variabl": [148, 150, 152], "output_q_compon": [148, 150, 152], "unsur": 148, "lenght": 148, "dt_max": [148, 150, 152], "stiff": 148, "retak": [148, 150, 152], "contamin": 148, "500000": 148, "steps_max": [148, 150, 152], "infinit": 148, "donor": [148, 150, 152], "upwind": 148, "transmit": 148, "transport": [148, 150, 152], "tranpsort": 148, "central": [148, 158, 159], "decomposit": 148, "srcn": [148, 167], "hyperol": 148, "src_split": [148, 150, 152], "thn": 148, "harder": 148, "checkpt_tim": [148, 150], "checkpt_interv": [148, 150], "refinement_ratios_x": [149, 150], "refinement_ratios_t": [149, 150, 151], "variable_dt_refinement_ratio": [149, 151], "xleft": [149, 150], "yleft": [149, 150], "travel": 149, "pt": [149, 150], "forbiddn": 149, "omp": 149, "spent": [149, 161], "1048575": 149, "4194303": 149, "8388607": 149, "dprint": [149, 150], "eprint": [149, 150], "edebug": [149, 150], "gprint": [149, 150], "bisect": [149, 150], "nprint": [149, 150], "pprint": [149, 150], "rprint": [149, 150], "sprint": [149, 150], "tprint": [149, 150], "uprint": [149, 150], "upbnd": [149, 150], "acoustics_2d_radi": [150, 167], "assert": [150, 152], "probdata": [150, 152], "new_userdata": [150, 152], "add_param": [150, 152], "medium": [150, 167], "000000e": 150, "000000": 150, "chk00006": [150, 152], "ntime": 150, "step_interv": 150, "00000e": 150, "900000": 150, "50000": 150, "amr_level_max": 150, "auxtyp": 150, "001000e": 150, "alg": 150, "toggl": 150, "err": 150, "est": 150, "proj": 150, "__name__": [150, 152], "__main__": [150, 152], "argv": [150, 152], "setrun_setgeo": 151, "refinement_data": 151, "speed_toler": 151, "earth_radiu": 151, "6367": 151, "5e3": 151, "friction_forc": 151, "manning_coeffici": 151, "delin": 151, "manning_break": 151, "file1info": 151, "file2info": 151, "dtopotyp": [151, 162], "qinit_typ": [151, 162], "qinitfil": 151, "qinitdata": 151, "coseism": 151, "surge_data": 151, "wind_forc": 151, "drag": 151, "drag_law": 151, "deterimin": [151, 164], "garret": 151, "powel": 151, "pressure_forc": 151, "wind_index": 151, "pressure_index": 151, "display_landfall_tim": 151, "wind_refin": 151, "r_refin": 151, "storm_specification_typ": 151, "chava": 151, "lin": 151, "emmanuel": 151, "storm_fil": [151, 158], "storm_specif": 151, "classic4": 152, "tout": 152, "javascript": 153, "publicli": 153, "develp": 154, "tropic": 154, "polar": 154, "variat": 154, "circumst": 154, "src1d": 157, "src3": [157, 167], "ensembl": 158, "my_storm": 158, "my_geoclaw_storm": 158, "imd": [158, 159], "nodataerror": 158, "nhc": 158, "japanes": 158, "meterolog": 158, "indian": 158, "meteorlog": 158, "datetiem": 158, "time_offset": 158, "eye_loc": 158, "ey": [158, 159], "decimc": 158, "max_wind_spe": 158, "max_wind_radiu": 158, "central_pressur": 158, "storm_radiu": 158, "iso": 158, "wind_spe": 158, "34kt": 158, "50kt": 158, "64kt": 158, "radii": 158, "categori": 158, "categor": 158, "cat_nam": 158, "car_nam": 158, "read_atcf": 158, "read_geoclaw": 158, "human": 158, "readabl": [158, 159], "read_hurdat": 158, "aoml": 158, "hrd": 158, "data_storm": 158, "single_storm": 158, "risen": 158, "read_ibtrac": 158, "sid": 158, "storm_nam": 158, "start_dat": 158, "agency_pref": 158, "wmo": 158, "usa": 158, "tokyo": 158, "newdelhi": 158, "reunion": 158, "bom": 158, "nadi": 158, "wellington": 158, "cma": 158, "hko": 158, "ds824": 158, "td9636": 158, "td9635": 158, "neumann": 158, "mlc": 158, "v4": 158, "unnam": 158, "wmo_": 158, "wmo_ag": 158, "usa_ag": 158, "closest": 158, "read_imd": 158, "read_jma": 158, "jp": 158, "eng": 158, "rsmc": 158, "hp": 158, "eg": 158, "besttrack": 158, "e_format_bst": 158, "read_tcvit": 158, "write_atcf": 158, "write_geoclaw": 158, "max_wind_radius_fil": 158, "storm_radius_fil": 158, "forecast": 158, "redund": 158, "write_hurdat": 158, "write_imd": 158, "write_jma": 158, "write_tcvit": 158, "available_format": 158, "available_model": 158, "fill_rad_w_other_sourc": 158, "storm_targ": 158, "interp_kwarg": 158, "tri": 158, "storm_ibtrac": 158, "path_to_ibtrac": 158, "2018300n26315": 158, "storm_atcf": 158, "path_to_atcf": 158, "fill_mwr": 158, "out_path": 158, "make_multi_structur": 158, "observerd": 159, "parametr": 159, "gride": 159, "dens": 159, "profil": [159, 164], "_storm_modul": 159, "stepgrid": 161, "850": 161, "853": 161, "288e": 161, "214": 161, "552": 161, "373e": 161, "92": 161, "774": 161, "370": 161, "259": 161, "260e": 161, "108": 161, "838": 161, "414": 161, "664": 161, "301e": 161, "440": 161, "392": 161, "473": 161, "014": 161, "801": 161, "508": 161, "447": 161, "413": 161, "402": 161, "483": 161, "472": 161, "470": 161, "85": 161, "uniformli": 162, "nw": 162, "deduc": 162, "input_path": 162, "output_path": 162, "nodatav": 162, "northernmost": 162, "west": 162, "convens": 162, "subsurfac": 162, "gigabyt": 162, "remote_topo_url": [162, 164], "topo1": 162, "navd88": 162, "determine_topo_typ": 164, "create_topo_func": 164, "topo1writ": 164, "topo2writ": 164, "topo3writ": 164, "swaphead": 164, "capab": 164, "mayb": 164, "in_poli": 164, "topo_func": 164, "unstructur": 164, "topo_fil": 164, "filter_region": 164, "generate_2d_topo": 164, "rai": 164, "cast": 164, "versu": 164, "arrang": 164, "x_mask": 164, "maskedarrai": 164, "interp_unstructur": 164, "fill_topo": 164, "delta_limit": 164, "no_data_valu": 164, "buffer_length": 164, "proximity_radiu": 164, "resolution_limit": 164, "gap": 164, "griddata": 164, "delta_x": 164, "delta_i": 164, "make_shoreline_xi": 164, "shoreline_xi": 164, "segement": 164, "npy": 164, "reload": 164, "long_lat": 164, "cb_kwarg": 164, "linestyl": 164, "compens": 164, "shrink": 164, "nc_param": 164, "read_head": 164, "swap": 164, "replace_no_data_valu": 164, "replace_valu": 164, "smooth_data": 164, "ball": 164, "inf": 164, "oscillatori": 164, "header_styl": 164, "7e": 164, "infer": 164, "arcgi": 164, "asc": 164, "millimet": 164, "15e": 164, "7i": 164, "coorind": 164, "specfi": 164, "topgraphi": 164, "__________________o": 164, "fetch_topo_url": 164, "local_fnam": 164, "ask_us": 164, "get_topo": 164, "claw_topo_download": 164, "run_exampl": 164, "topo_fnam": 164, "remote_directori": 164, "zvar": 164, "return_topo": 164, "return_xarrai": 164, "band1": 164, "xarrai": 164, "xarray_d": 164, "etopo_sample_2min": 164, "0f": 164, "western": 164, "outputfil": 164, "outfil": 164, "nxpoint": 164, "nypoint": 164, "topotype1": 164, "99999": 164, "forget": 165, "whichclaw": 165, "gnufcompil": 165, "tarbal": 165, "config_fc": 165, "fcompil": 165, "printenv": 165, "154": 165, "wc": 166, "catalog": 166, "mllw": 166, "gloss": 166, "sonel": 166, "mbc": 167, "5d0": 167, "heterogen": 167, "b4stepn": 167, "advection_2d_swirl": 167, "1drad": 167, "mx1d": 167, "q1d": 167, "aux1d": 167, "reader": 168, "time_files_scanf": 168, "04d": 168, "grid_files_scanf": 168, "silo": 168, "vm": 169, "equiv": 170, "m_w": 170, "sum_": 170, "sum_p": 170, "qquad": 170, "nonconserv": 170, "eqn": 170, "claw_1dnoncon": 170, "tild": 170, "f_": 170, "kappa_i": 170}, "objects": {"": [[0, 0, 1, "", "ClawPlotAxes"], [1, 0, 1, "", "ClawPlotData"], [2, 0, 1, "", "ClawPlotFigure"], [3, 0, 1, "", "ClawPlotItem"], [1, 2, 1, "", "clearfigures"], [1, 2, 1, "", "clearframes"], [1, 2, 1, "", "getaxes"], [1, 2, 1, "", "getfigure"], [3, 2, 1, "", "getframe"], [3, 2, 1, "", "gethandle"], [1, 2, 1, "", "getitem"], [1, 2, 1, "", "iplotclaw"], [2, 2, 1, "", "new_plotaxes"], [1, 2, 1, "", "new_plotfigure"], [0, 2, 1, "", "new_plotitem"], [1, 2, 1, "", "plotframe"], [1, 2, 1, "", "printframes"], [1, 2, 1, "", "showitems"]], "clawpack.geoclaw": [[32, 1, 0, "-", "dtopotools"], [35, 1, 0, "-", "fgmax_tools"], [37, 1, 0, "-", "fgout_tools"], [63, 1, 0, "-", "kmltools"], [164, 1, 0, "-", "topotools"], [51, 1, 0, "-", "util"]], "clawpack.geoclaw.dtopotools": [[32, 0, 1, "", "CSVFault"], [32, 0, 1, "", "DTopography"], [32, 0, 1, "", "DTopography1d"], [32, 0, 1, "", "Fault"], [32, 0, 1, "", "Fault1d"], [32, 3, 1, "", "Mw"], [32, 0, 1, "", "SiftFault"], [32, 0, 1, "", "SubFault"], [32, 0, 1, "", "SubFault1d"], [32, 0, 1, "", "SubdividedPlaneFault"], [32, 0, 1, "", "TensorProductFault"], [32, 0, 1, "", "UCSBFault"], [32, 3, 1, "", "plot_dZ_colors"], [32, 3, 1, "", "plot_dZ_contours"], [32, 3, 1, "", "rise_fraction"], [32, 3, 1, "", "strike_direction"]], "clawpack.geoclaw.dtopotools.CSVFault": [[32, 2, 1, "", "read"]], "clawpack.geoclaw.dtopotools.DTopography": [[32, 2, 1, "", "dZ_at_t"], [32, 2, 1, "", "dZ_max"], [32, 2, 1, "", "plot_dZ_colors"], [32, 2, 1, "", "plot_dZ_contours"], [32, 2, 1, "", "read"], [32, 2, 1, "", "write"]], "clawpack.geoclaw.dtopotools.DTopography1d": [[32, 2, 1, "", "dZ_at_t"], [32, 2, 1, "", "dZ_cellave_at_t"], [32, 2, 1, "", "read"], [32, 2, 1, "", "write"]], "clawpack.geoclaw.dtopotools.Fault": [[32, 2, 1, "", "Mo"], [32, 2, 1, "", "Mw"], [32, 2, 1, "", "containing_rect"], [32, 2, 1, "", "create_dtopo_xy"], [32, 2, 1, "", "create_dtopography"], [32, 2, 1, "", "plot_subfaults"], [32, 2, 1, "", "plot_subfaults_depth"], [32, 2, 1, "", "read"], [32, 2, 1, "", "set_dynamic_slip"], [32, 2, 1, "", "write"]], "clawpack.geoclaw.dtopotools.SiftFault": [[32, 2, 1, "", "set_subfaults"]], "clawpack.geoclaw.dtopotools.SubFault": [[32, 2, 1, "", "Mo"], [32, 2, 1, "", "calculate_geometry"], [32, 2, 1, "", "calculate_geometry_triangles"], [32, 4, 1, "", "centers"], [32, 2, 1, "", "convert_to_standard_units"], [32, 5, 1, "", "coordinate_specification"], [32, 4, 1, "", "corners"], [32, 5, 1, "", "depth"], [32, 5, 1, "", "dip"], [32, 2, 1, "", "dynamic_slip"], [32, 4, 1, "", "gauss_pts"], [32, 5, 1, "", "latitude"], [32, 5, 1, "", "length"], [32, 5, 1, "", "longitude"], [32, 5, 1, "", "mu"], [32, 2, 1, "", "okada"], [32, 5, 1, "", "rake"], [32, 5, 1, "", "rise_shape"], [32, 5, 1, "", "rise_time"], [32, 5, 1, "", "rise_time_starting"], [32, 5, 1, "", "rupture_time"], [32, 5, 1, "", "rupture_type"], [32, 2, 1, "", "set_corners"], [32, 5, 1, "", "slip"], [32, 5, 1, "", "strike"], [32, 5, 1, "", "width"]], "clawpack.geoclaw.dtopotools.SubFault1d": [[32, 5, 1, "", "coordinate_specification"], [32, 5, 1, "", "latitude"], [32, 5, 1, "", "length"], [32, 5, 1, "", "longitude"], [32, 5, 1, "", "rake"], [32, 5, 1, "", "strike"]], "clawpack.geoclaw.dtopotools.SubdividedPlaneFault": [[32, 2, 1, "", "subdivide"]], "clawpack.geoclaw.dtopotools.UCSBFault": [[32, 2, 1, "", "read"]], "clawpack.geoclaw.fgmax_tools": [[35, 0, 1, "", "FGmaxGrid"], [35, 3, 1, "", "adjust_fgmax_1d"]], "clawpack.geoclaw.fgmax_tools.FGmaxGrid": [[35, 2, 1, "", "bounding_box"], [35, 2, 1, "", "interp_dz"], [35, 2, 1, "", "ps4_to_arrays"], [35, 2, 1, "", "read_fgmax_grids_data"], [35, 2, 1, "", "read_output"], [35, 2, 1, "", "write_to_fgmax_data"]], "clawpack.geoclaw.fgout_tools": [[37, 0, 1, "", "FGoutFrame"], [37, 0, 1, "", "FGoutGrid"], [37, 3, 1, "", "get_as_array"], [37, 3, 1, "", "make_fgout_fcn_xy"], [37, 3, 1, "", "make_fgout_fcn_xyt"], [37, 3, 1, "", "print_netcdf_info"], [37, 3, 1, "", "read_netcdf"], [37, 3, 1, "", "read_netcdf_arrays"], [37, 3, 1, "", "write_netcdf"]], "clawpack.geoclaw.fgout_tools.FGoutFrame": [[37, 4, 1, "", "B"], [37, 4, 1, "", "eta"], [37, 4, 1, "", "h"], [37, 4, 1, "", "hss"], [37, 4, 1, "", "hu"], [37, 4, 1, "", "hv"], [37, 4, 1, "", "s"], [37, 4, 1, "", "u"], [37, 4, 1, "", "v"]], "clawpack.geoclaw.fgout_tools.FGoutGrid": [[37, 4, 1, "", "X"], [37, 4, 1, "", "Y"], [37, 4, 1, "", "extent_centers"], [37, 4, 1, "", "extent_edges"], [37, 2, 1, "", "read_fgout_grids_data"], [37, 2, 1, "", "read_frame"], [37, 2, 1, "", "set_plotdata"], [37, 2, 1, "", "write_to_fgout_data"], [37, 4, 1, "", "x"], [37, 4, 1, "", "y"]], "clawpack.geoclaw.kmltools": [[63, 3, 1, "", "box2kml"], [63, 3, 1, "", "deg2dms"], [63, 3, 1, "", "dtopo2kml"], [63, 3, 1, "", "f2s"], [63, 3, 1, "", "fgmax2kml"], [63, 3, 1, "", "fgout2kml"], [63, 3, 1, "", "gauges2kml"], [63, 3, 1, "", "kml_build_colorbar"], [63, 3, 1, "", "kml_cb"], [63, 3, 1, "", "kml_png"], [63, 3, 1, "", "kml_timespan"], [63, 3, 1, "", "line2kml"], [63, 3, 1, "", "make_input_data_kmls"], [63, 3, 1, "", "pcolorcells_for_kml"], [63, 3, 1, "", "png2kml"], [63, 3, 1, "", "poly2kml"], [63, 3, 1, "", "quad2kml"], [63, 3, 1, "", "regions2kml"], [63, 3, 1, "", "topo2kml"], [63, 3, 1, "", "topo2kmz"], [63, 3, 1, "", "transect2kml"]], "clawpack.geoclaw.surge": [[158, 1, 0, "-", "storm"]], "clawpack.geoclaw.surge.storm": [[158, 6, 1, "", "NoDataError"], [158, 0, 1, "", "Storm"], [158, 3, 1, "", "available_formats"], [158, 3, 1, "", "available_models"], [158, 3, 1, "", "fill_rad_w_other_source"], [158, 3, 1, "", "make_multi_structure"]], "clawpack.geoclaw.surge.storm.Storm": [[158, 2, 1, "", "category"], [158, 2, 1, "", "read"], [158, 2, 1, "", "read_atcf"], [158, 2, 1, "", "read_geoclaw"], [158, 2, 1, "", "read_hurdat"], [158, 2, 1, "", "read_ibtracs"], [158, 2, 1, "", "read_imd"], [158, 2, 1, "", "read_jma"], [158, 2, 1, "", "read_tcvitals"], [158, 2, 1, "", "write"], [158, 2, 1, "", "write_atcf"], [158, 2, 1, "", "write_geoclaw"], [158, 2, 1, "", "write_hurdat"], [158, 2, 1, "", "write_imd"], [158, 2, 1, "", "write_jma"], [158, 2, 1, "", "write_tcvitals"]], "clawpack.geoclaw.topotools": [[164, 0, 1, "", "Topography"], [164, 3, 1, "", "create_topo_func"], [164, 3, 1, "", "determine_topo_type"], [164, 3, 1, "", "fetch_topo_url"], [164, 3, 1, "", "get_topo"], [164, 3, 1, "", "read_netcdf"], [164, 3, 1, "", "swapheader"], [164, 3, 1, "", "topo1writer"], [164, 3, 1, "", "topo2writer"], [164, 3, 1, "", "topo3writer"]], "clawpack.geoclaw.topotools.Topography": [[164, 4, 1, "", "X"], [164, 4, 1, "", "Y"], [164, 4, 1, "", "Z"], [164, 2, 1, "", "crop"], [164, 4, 1, "", "delta"], [164, 4, 1, "", "extent"], [164, 2, 1, "", "generate_2d_coordinates"], [164, 2, 1, "", "generate_2d_topo"], [164, 2, 1, "", "in_poly"], [164, 2, 1, "", "interp_unstructured"], [164, 2, 1, "", "make_shoreline_xy"], [164, 2, 1, "", "plot"], [164, 2, 1, "", "read"], [164, 2, 1, "", "read_header"], [164, 2, 1, "", "replace_no_data_values"], [164, 2, 1, "", "replace_values"], [164, 2, 1, "", "set_xyZ"], [164, 2, 1, "", "smooth_data"], [164, 2, 1, "", "write"], [164, 4, 1, "", "x"], [164, 4, 1, "", "y"], [164, 4, 1, "", "z"]], "clawpack.geoclaw.util": [[51, 3, 1, "", "bearing"], [51, 3, 1, "", "dist_latlong2meters"], [51, 3, 1, "", "dist_meters2latlong"], [51, 3, 1, "", "dms2decimal"], [51, 3, 1, "", "fetch_noaa_tide_data"], [51, 3, 1, "", "gctransect"], [51, 3, 1, "", "haversine"], [51, 3, 1, "", "inv_haversine"]], "clawpack.petclaw.geometry": [[94, 0, 1, "", "Domain"], [94, 0, 1, "", "Patch"]], "clawpack.petclaw.geometry.Domain": [[94, 5, 1, "", "dimensional_split"], [94, 5, 1, "", "fwave"], [94, 5, 1, "", "kernel_language"], [94, 5, 1, "", "mthlim"], [94, 5, 1, "", "order"], [94, 5, 1, "", "source_split"], [94, 5, 1, "", "step_source"], [94, 5, 1, "", "transverse_waves"], [94, 5, 1, "", "verbosity"]], "clawpack.petclaw.state": [[106, 0, 1, "", "State"]], "clawpack.petclaw.state.State": [[106, 4, 1, "", "F"], [106, 4, 1, "", "aux"], [106, 4, 1, "", "fset"], [106, 5, 1, "", "gauge_data"], [106, 2, 1, "", "get_aux_global"], [106, 2, 1, "", "get_auxbc_from_aux"], [106, 2, 1, "", "get_q_global"], [106, 2, 1, "", "get_qbc_from_q"], [106, 5, 1, "", "keep_gauges"], [106, 4, 1, "", "mF"], [106, 4, 1, "", "mp"], [106, 4, 1, "", "num_aux"], [106, 4, 1, "", "num_eqn"], [106, 4, 1, "", "p"], [106, 5, 1, "", "problem_data"], [106, 4, 1, "", "q"], [106, 2, 1, "", "set_num_ghost"], [106, 5, 1, "", "t"]], "clawpack.pyclaw.classic.solver": [[104, 0, 1, "", "ClawSolver"]], "clawpack.pyclaw.classic.solver.ClawSolver": [[104, 5, 1, "", "fwave"], [104, 5, 1, "", "kernel_language"], [104, 5, 1, "", "mthlim"], [104, 5, 1, "", "order"], [104, 2, 1, "", "setup"], [104, 5, 1, "", "source_split"], [104, 2, 1, "", "step"], [104, 2, 1, "", "step_hyperbolic"], [104, 5, 1, "", "step_source"], [104, 5, 1, "", "verbosity"]], "clawpack.pyclaw.controller": [[91, 0, 1, "", "Controller"]], "clawpack.pyclaw.controller.Controller": [[91, 5, 1, "", "F_file_name"], [91, 4, 1, "", "F_path"], [91, 2, 1, "", "check_validity"], [91, 5, 1, "", "compute_F"], [91, 5, 1, "", "compute_p"], [91, 5, 1, "", "file_prefix_p"], [91, 5, 1, "", "frames"], [91, 5, 1, "", "keep_copy"], [91, 5, 1, "", "nstepout"], [91, 5, 1, "", "num_output_times"], [91, 5, 1, "", "out_times"], [91, 5, 1, "", "outdir"], [91, 4, 1, "", "outdir_p"], [91, 5, 1, "", "output_file_prefix"], [91, 5, 1, "", "output_format"], [91, 5, 1, "", "output_options"], [91, 5, 1, "", "output_style"], [91, 5, 1, "", "overwrite"], [91, 2, 1, "", "plot"], [91, 5, 1, "", "plotdata"], [91, 2, 1, "", "run"], [91, 5, 1, "", "rundir"], [91, 5, 1, "", "runmake"], [91, 5, 1, "", "savecode"], [91, 5, 1, "", "solver"], [91, 5, 1, "", "tfinal"], [91, 4, 1, "", "verbosity"], [91, 5, 1, "", "viewable_attributes"], [91, 5, 1, "", "write_aux_always"], [91, 5, 1, "", "write_aux_init"], [91, 5, 1, "", "xclawcmd"], [91, 5, 1, "", "xclawerr"], [91, 5, 1, "", "xclawout"], [91, 5, 1, "", "xdir"]], "clawpack.pyclaw.fileio": [[97, 1, 0, "-", "ascii"], [97, 1, 0, "-", "binary"], [97, 1, 0, "-", "hdf5"], [97, 1, 0, "-", "netcdf"]], "clawpack.pyclaw.fileio.ascii": [[97, 3, 1, "", "read"], [97, 3, 1, "", "read_array"], [97, 3, 1, "", "read_patch_header"], [97, 3, 1, "", "read_t"], [97, 3, 1, "", "write"], [97, 3, 1, "", "write_array"]], "clawpack.pyclaw.fileio.binary": [[97, 3, 1, "", "read"]], "clawpack.pyclaw.fileio.hdf5": [[97, 3, 1, "", "read"], [97, 3, 1, "", "write"]], "clawpack.pyclaw.fileio.netcdf": [[97, 3, 1, "", "read"], [97, 3, 1, "", "write"]], "clawpack.pyclaw.geometry": [[94, 0, 1, "", "Dimension"], [94, 0, 1, "", "Domain"], [94, 0, 1, "", "Grid"], [94, 0, 1, "", "Patch"]], "clawpack.pyclaw.geometry.Dimension": [[94, 4, 1, "", "centers"], [94, 2, 1, "", "centers_with_ghost"], [94, 4, 1, "", "delta"], [94, 4, 1, "", "nodes"], [94, 2, 1, "", "nodes_with_ghost"]], "clawpack.pyclaw.geometry.Domain": [[94, 4, 1, "", "grid"], [94, 4, 1, "", "num_dim"], [94, 4, 1, "", "patch"]], "clawpack.pyclaw.geometry.Grid": [[94, 2, 1, "", "add_dimension"], [94, 2, 1, "", "add_gauges"], [94, 2, 1, "", "c_center"], [94, 4, 1, "", "c_centers"], [94, 2, 1, "", "c_centers_with_ghost"], [94, 4, 1, "", "c_nodes"], [94, 2, 1, "", "c_nodes_with_ghost"], [94, 4, 1, "", "dimensions"], [94, 5, 1, "", "gauge_dir_name"], [94, 5, 1, "", "gauge_file_names"], [94, 5, 1, "", "gauge_files"], [94, 5, 1, "", "gauges"], [94, 2, 1, "", "get_dim_attribute"], [94, 4, 1, "", "num_dim"], [94, 2, 1, "", "p_center"], [94, 4, 1, "", "p_centers"], [94, 4, 1, "", "p_nodes"], [94, 2, 1, "", "plot"], [94, 2, 1, "", "setup_gauge_files"]], "clawpack.pyclaw.geometry.Patch": [[94, 2, 1, "", "add_dimension"], [94, 4, 1, "", "delta"], [94, 4, 1, "", "dimensions"], [94, 2, 1, "", "get_dim_attribute"], [94, 5, 1, "", "level"], [94, 4, 1, "", "lower_global"], [94, 4, 1, "", "name"], [94, 4, 1, "", "num_cells_global"], [94, 4, 1, "", "num_dim"], [94, 5, 1, "", "patch_index"], [94, 4, 1, "", "upper_global"]], "clawpack.pyclaw.limiters": [[92, 1, 0, "-", "tvd"]], "clawpack.pyclaw.limiters.tvd": [[92, 3, 1, "", "arora_roe"], [92, 3, 1, "", "beta_limiter"], [92, 3, 1, "", "cada_torrilhon_limiter"], [92, 3, 1, "", "cada_torrilhon_limiter_nonlinear"], [92, 3, 1, "", "cfl_superbee"], [92, 3, 1, "", "cfl_superbee_theta"], [92, 3, 1, "", "hyperbee_limiter"], [92, 3, 1, "", "limit"], [92, 3, 1, "", "mc_limiter"], [92, 3, 1, "", "minmod_limiter"], [92, 3, 1, "", "superbee_limiter"], [92, 3, 1, "", "superpower_limiter"], [92, 3, 1, "", "theta_limiter"], [92, 3, 1, "", "upper_bound_limiter"], [92, 3, 1, "", "van_leer_klein_sharpening_limiter"]], "clawpack.pyclaw.sharpclaw.solver": [[104, 0, 1, "", "SharpClawSolver"]], "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver": [[104, 2, 1, "", "accept_reject_step"], [104, 5, 1, "", "aux_time_dep"], [104, 5, 1, "", "call_before_step_each_stage"], [104, 5, 1, "", "cfl_desired"], [104, 5, 1, "", "cfl_max"], [104, 5, 1, "", "char_decomp"], [104, 2, 1, "", "check_3rd_ord_cond"], [104, 2, 1, "", "dq"], [104, 5, 1, "", "dq_src"], [104, 2, 1, "", "dqdt"], [104, 5, 1, "", "fwave"], [104, 2, 1, "", "get_dt_new"], [104, 5, 1, "", "kernel_language"], [104, 5, 1, "", "lim_type"], [104, 5, 1, "", "num_ghost"], [104, 2, 1, "", "setup"], [104, 2, 1, "", "step"], [104, 5, 1, "", "tfluct"], [104, 5, 1, "", "tfluct_solver"], [104, 5, 1, "", "time_integrator"], [104, 2, 1, "", "update_saved_values"], [104, 5, 1, "", "weno_order"]], "clawpack.pyclaw.solution": [[103, 0, 1, "", "Solution"]], "clawpack.pyclaw.solution.Solution": [[103, 2, 1, "", "is_valid"], [103, 4, 1, "", "patch"], [103, 2, 1, "", "plot"], [103, 2, 1, "", "read"], [103, 2, 1, "", "set_all_states"], [103, 4, 1, "", "start_frame"], [103, 4, 1, "", "state"], [103, 2, 1, "", "write"]], "clawpack.pyclaw.state": [[106, 0, 1, "", "State"]], "clawpack.pyclaw.state.State": [[106, 5, 1, "", "F"], [106, 5, 1, "", "gauge_data"], [106, 2, 1, "", "get_aux_global"], [106, 2, 1, "", "get_auxbc_from_aux"], [106, 2, 1, "", "get_q_global"], [106, 2, 1, "", "get_qbc_from_q"], [106, 2, 1, "", "is_valid"], [106, 5, 1, "", "keep_gauges"], [106, 4, 1, "", "mF"], [106, 4, 1, "", "mp"], [106, 4, 1, "", "num_aux"], [106, 4, 1, "", "num_eqn"], [106, 5, 1, "", "p"], [106, 5, 1, "", "problem_data"], [106, 2, 1, "", "set_aux_from_auxbc"], [106, 2, 1, "", "set_cparam"], [106, 2, 1, "", "set_num_ghost"], [106, 2, 1, "", "set_q_from_qbc"], [106, 5, 1, "", "t"]], "clawpack.pyclaw": [[109, 1, 0, "-", "util"]], "clawpack.pyclaw.util": [[109, 0, 1, "", "FrameCounter"], [109, 6, 1, "", "VerifyError"], [109, 3, 1, "", "add_parent_doc"], [109, 3, 1, "", "check_diff"], [109, 3, 1, "", "compile_library"], [109, 3, 1, "", "construct_function_handle"], [109, 3, 1, "", "convert_fort_double_to_float"], [109, 3, 1, "", "gen_variants"], [109, 3, 1, "", "read_data_line"], [109, 3, 1, "", "run_app_from_main"], [109, 3, 1, "", "run_serialized"], [109, 3, 1, "", "test_app"]], "clawpack.pyclaw.util.FrameCounter": [[109, 2, 1, "", "get_counter"], [109, 2, 1, "", "increment"], [109, 2, 1, "", "reset_counter"], [109, 2, 1, "", "set_counter"]], "clawpack.riemann": [[102, 1, 0, "-", "acoustics_1D_py"], [102, 1, 0, "-", "advection_1D_py"], [102, 1, 0, "-", "burgers_1D_py"], [102, 1, 0, "-", "euler_1D_py"], [102, 1, 0, "-", "shallow_1D_py"]], "clawpack.riemann.acoustics_1D_py": [[102, 3, 1, "", "acoustics_1D"]], "clawpack.riemann.advection_1D_py": [[102, 3, 1, "", "advection_1D"]], "clawpack.riemann.burgers_1D_py": [[102, 3, 1, "", "burgers_1D"]], "clawpack.riemann.euler_1D_py": [[102, 3, 1, "", "euler_exact_1D"], [102, 3, 1, "", "euler_hll_1D"], [102, 3, 1, "", "euler_hllc_1D"], [102, 3, 1, "", "euler_roe_1D"]], "clawpack.riemann.shallow_1D_py": [[102, 3, 1, "", "shallow_exact_1D"], [102, 3, 1, "", "shallow_fwave_1d"], [102, 3, 1, "", "shallow_hll_1D"], [102, 3, 1, "", "shallow_roe_1D"]]}, "objtypes": {"0": "py:class", "1": "py:module", "2": "py:method", "3": "py:function", "4": "py:property", "5": "py:attribute", "6": "py:exception"}, "objnames": {"0": ["py", "class", "Python class"], "1": ["py", "module", "Python module"], "2": ["py", "method", "Python method"], "3": ["py", "function", "Python function"], "4": ["py", "property", "Python property"], "5": ["py", "attribute", "Python attribute"], "6": ["py", "exception", "Python exception"]}, "titleterms": {"clawplotax": 0, "attribut": [0, 1, 2, 3, 29, 34, 55, 82, 142], "gaug": [0, 47, 55, 64, 98, 166], "plot": [0, 3, 13, 24, 27, 34, 36, 47, 50, 53, 55, 64, 66, 71, 80, 81, 82, 83, 84, 93, 99, 100, 116, 147, 153, 165, 168], "method": [0, 1, 2, 3, 142, 170], "clawplotdata": 1, "clawplotfigur": 2, "clawplotitem": [3, 82], "special": [3, 149], "all": [3, 62, 70], "1d": [3, 8, 18], "plot_typ": 3, "1d_plot": 3, "1d_fill_between": 3, "1d_from_2d_data": 3, "2d": [3, 19, 140], "2d_contour": 3, "2d_pcolor": 3, "2d_imshow": 3, "2d_hillshad": 3, "amr": [3, 5, 6, 24, 70, 76, 115, 142, 149, 151], "colorbar": [3, 55], "about": [4, 86], "thi": [4, 58], "softwar": [4, 17], "licens": [4, 65, 86], "author": 4, "cite": [4, 96], "work": [4, 35, 37, 93, 163, 164, 167], "fund": [4, 86], "guid": [5, 30, 58, 59, 113, 114], "adjoint": 5, "flag": [5, 6, 66, 70, 115, 142, 149], "us": [5, 13, 18, 19, 27, 31, 36, 41, 52, 56, 62, 64, 67, 71, 73, 76, 78, 98, 101, 104, 107, 140, 141, 144, 147, 165, 167], "geoclaw": [5, 15, 16, 20, 24, 27, 42, 48, 49, 50, 51, 52, 53, 55, 76, 79, 83, 112, 115, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 142, 145, 151, 156, 157], "adapt": [6, 16, 27, 41], "mesh": [6, 27], "refin": [6, 16, 27, 41, 115, 151], "algorithm": [6, 17, 70, 78, 170], "ghost": 6, "cell": [6, 42, 142, 151], "boundari": [6, 16, 101, 167, 170], "condit": [6, 16, 101, 108, 167, 170], "choos": [6, 70], "initi": [6, 42, 70, 101, 108, 144, 151, 167], "finer": 6, "grid": [6, 16, 34, 35, 36, 37, 49, 57, 64, 76, 94, 151], "For": 6, "more": [6, 39, 43], "detail": [6, 7, 48], "amrclaw": [7, 8, 9, 10, 20, 27, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 149, 150, 167], "descript": [7, 48], "content": [7, 27, 30, 42, 48, 70, 82, 88, 98, 104, 116, 142], "problem": [8, 89, 101, 108, 167], "old": 8, "approach": 8, "deprec": [8, 151], "doxygen": 9, "document": [9, 11, 32, 35, 37, 51, 58, 59, 63, 96, 126, 127, 155, 164], "flowchart": 10, "applic": [11, 12, 17, 27, 28, 66, 74, 99], "convert": [11, 21, 22], "readm": 11, "rst": 11, "html": [11, 84], "code": [11, 18, 19, 27, 30, 42, 50, 61, 62, 79, 116, 165, 167], "clawcode2html": 11, "clawpack": [12, 13, 17, 20, 21, 22, 23, 24, 25, 26, 27, 31, 46, 56, 58, 59, 60, 61, 66, 78, 79, 89, 92, 104, 105, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 141, 152, 169], "repositori": [12, 20, 25, 30, 54, 58, 59, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 140], "jupyt": [12, 31, 40, 153], "notebook": [12, 31, 40, 110, 153], "submodul": 12, "exampl": [12, 19, 27, 28, 34, 36, 38, 39, 40, 42, 45, 47, 50, 55, 62, 70, 71, 74, 80, 93, 96, 99, 142], "includ": [12, 58], "amazon": 13, "web": 13, "servic": 13, "ec2": 13, "ami": 13, "find": [13, 70, 82], "launch": 13, "an": [13, 38, 39, 40, 55, 64, 70, 74, 99], "instanc": 13, "log": [13, 98], "your": [13, 30, 31, 39, 55, 99, 101, 105, 153, 160], "view": 13, "result": [13, 50, 55, 100, 153], "webpag": [13, 58, 153], "directli": [13, 36], "from": [13, 21, 22, 24, 27, 30, 32, 35, 37, 40, 42, 45, 51, 58, 63, 70, 84, 89, 93, 100, 142, 164], "transfer": 13, "file": [13, 31, 33, 34, 36, 42, 55, 57, 58, 59, 61, 67, 71, 82, 84, 116, 139, 142, 151, 162, 167], "stop": [13, 31], "creat": [13, 31, 42, 55, 59, 70, 71, 74, 88], "own": [13, 31, 101], "b4run": 14, "function": [14, 51, 63, 69, 70, 84, 98, 104, 170], "b4step": [15, 167], "default": [15, 112, 144, 145, 156, 157], "routin": [15, 24, 67, 83, 112, 145, 156, 157], "clamshel": 16, "sphere": [16, 154], "user": [16, 26, 78, 167], "defin": [16, 142], "bibliographi": 17, "paper": 17, "describ": 17, "other": [17, 20, 25, 26, 31, 34, 58, 82, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 142, 144], "refer": [17, 27, 56, 96, 110], "boussinesq": [18, 19], "solver": [18, 19, 78, 88, 96, 101, 102, 104, 108, 140, 141, 167], "One": [18, 49, 140, 141, 170], "space": [18, 19, 49, 170], "dimens": [18, 19, 49, 94, 141, 170], "makefil": [18, 19, 43, 66, 67, 101, 139], "setrun": [18, 19, 24, 47, 148, 149, 150, 151, 152], "py": [18, 19, 24, 36, 82, 111, 147, 148, 149, 150, 151, 152], "two": [19, 141], "type": 19, "dispers": 19, "equat": [19, 102, 108, 141], "The": [19, 55, 69, 70, 71, 108], "sgn": 19, "madsen": 19, "sorensen": 19, "m": 19, "prerequisit": [19, 85], "wave": [19, 140, 170], "break": 19, "switch": [19, 71], "swe": 19, "chang": [20, 24, 82, 104, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "master": [20, 30], "sinc": 20, "v5": [20, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "9": [20, 31, 135, 136, 137], "2": [20, 110, 120, 121, 122, 134, 137], "ar": [20, 82, 118, 127, 128, 129, 130, 131, 132, 133, 134, 135], "backward": [20, 118, 127, 128, 129, 130, 131, 132, 133, 134, 135], "compat": [20, 118, 127, 128, 129, 130, 131, 132, 133, 134, 135], "gener": [20, 24, 32, 35, 37, 51, 58, 63, 127, 128, 129, 130, 131, 132, 133, 134, 135, 137, 151, 164], "classic": [20, 27, 38, 39, 104, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 148, 152, 160], "clawutil": [20, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "visclaw": [20, 27, 64, 81, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "riemann": [20, 27, 96, 101, 102, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 140, 141, 167], "pyclaw": [20, 24, 27, 38, 40, 62, 86, 87, 88, 89, 90, 91, 92, 93, 94, 96, 97, 98, 100, 103, 104, 105, 106, 108, 109, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 160], "4": [21, 22, 23, 24, 89, 125, 126, 138], "3": [21, 42, 70, 123, 124], "6": [21, 22, 89, 128, 129], "5": [22, 24, 31, 127], "0": [22, 24, 31, 117, 118, 119, 120, 123, 125, 127, 128, 130, 132, 135], "python": [22, 84, 85, 105, 110, 111, 130, 163], "convers": 22, "tool": [22, 27, 47, 53, 64, 116, 158, 163], "x": [23, 24, 89, 138], "link": 23, "fortran": [24, 27, 33, 39, 42, 43, 44, 61, 85, 107, 116, 165, 167], "packag": [24, 62, 97, 102], "input": [24, 34, 36, 97, 148, 149], "paramet": [24, 47, 82, 84, 108, 148, 149, 151], "compon": [25, 82], "commun": [26, 30, 79], "workshop": [26, 79], "clinic": 26, "tutori": [26, 108, 110], "avail": [26, 45], "stream": 26, "upcom": 26, "recent": [26, 30], "develop": [26, 27, 30, 79], "sprint": [26, 79], "session": 26, "previou": [26, 58], "event": [26, 55], "full": 27, "tabl": [27, 96], "overview": [27, 147], "get": [27, 31, 50, 71], "start": [27, 31, 50, 113, 114], "geophys": 27, "flow": [27, 88], "visual": [27, 55], "migrat": 27, "older": 27, "version": [27, 31, 43, 54, 56, 58, 59, 62, 111], "resourc": 27, "contribut": [28, 30, 141], "current_data": [29, 84], "guidelin": 30, "report": 30, "fix": [30, 34, 36, 76, 151], "bug": 30, "instal": [30, 39, 40, 60, 61, 62, 78, 85, 96, 99, 105, 107, 111, 160, 165], "instruct": [30, 62], "clone": [30, 61], "most": 30, "github": [30, 59], "check": [30, 116], "out": [30, 70], "branch": [30, 58], "each": [30, 167], "updat": [30, 58, 59], "latest": 30, "never": 30, "commit": 30, "ad": [30, 55, 93, 101, 140], "fork": 30, "remot": 30, "modifi": [30, 67, 139], "issu": 30, "pull": 30, "request": 30, "test": [30, 39, 40, 99, 105, 116, 160], "top": 30, "level": [30, 144, 151], "git": [30, 54, 58, 61, 85], "workflow": 30, "catch": 30, "error": [30, 107], "pyflak": 30, "pylint": 30, "coverag": 30, "troubl": [30, 71, 165], "shoot": [30, 71], "tip": [30, 43, 53, 55, 99], "docker": 31, "abov": 31, "contain": 31, "restart": [31, 88, 139], "run": [31, 38, 39, 40, 50, 88, 90, 93, 99, 100, 116, 148, 149, 165], "move": [31, 32, 49], "between": [31, 82], "host": 31, "machin": [31, 169], "some": [31, 82, 151, 166], "command": [31, 40, 71, 84, 93, 165], "imag": [31, 55], "dockerfil": [31, 59], "binder": 31, "dtopotool": 32, "modul": [32, 35, 37, 51, 63, 96, 109, 150, 152, 164], "topographi": [32, 42, 50, 55, 70, 151, 162, 164, 166], "auto": [32, 35, 37, 51, 63, 164], "docstr": [32, 35, 37, 51, 63, 164], "77": 33, "v": 33, "90": 33, "monitor": [34, 151], "fgmax": [34, 35, 70], "specif": [34, 36, 108, 116, 151, 158, 167], "differ": [34, 55, 62, 67, 78, 82], "point": [34, 70], "style": [34, 58, 77], "valu": [34, 88], "choic": [34, 36], "interpol": [34, 36, 72], "procedur": [34, 36], "A": [34, 36, 142], "simpl": [34, 36, 142], "process": [34, 81], "output": [34, 36, 66, 70, 71, 73, 76, 77, 88, 97, 98, 116, 139, 148, 149, 151, 165], "format": [34, 36, 77, 162], "fgmax_tool": 35, "fgout": [36, 37, 64], "setplot": [36, 71, 82, 84, 147], "produc": [36, 84], "read": [36, 42, 142], "arrai": [36, 42, 70, 77, 107], "registr": [36, 57], "fgout_tool": 37, "ipython": [40, 93], "interpret": 40, "line": [40, 84, 93, 116, 165], "specifi": [41, 64, 82, 84, 115, 147, 148, 149, 151, 167], "flagregion": 41, "rule": [41, 142], "rectangl": [41, 142], "forc": [42, 151], "dry": [42, 70, 151], "sampl": [42, 70, 150, 152], "1": [42, 70, 119, 121, 124, 126, 129, 131, 133, 136], "arcsecond": [42, 70], "dem": [42, 70], "force_dry_init": 42, "usag": 42, "intern": 42, "modif": 42, "compil": [44, 66, 107, 155, 165], "fc": [44, 146], "environ": [44, 146], "variabl": [44, 66, 101, 146], "fflag": 44, "lflag": 44, "pre": 44, "processor": 44, "ppflag": 44, "gfortran": [44, 105], "intel": 44, "book": 45, "fvmhp": 45, "youtub": 45, "video": 45, "galleri": [46, 58, 71], "locat": 47, "coordin": [49, 53, 55], "system": [49, 85], "uniform": 49, "map": [49, 55], "topograpi": 49, "data": [49, 55, 77, 147, 151, 159, 162, 164, 165, 166, 167], "dtopo": [49, 163], "set": [50, 71, 82, 84, 101, 143, 144, 146, 165], "up": [50, 101], "new": [50, 58, 74, 93, 116], "util": [51, 63, 109], "cautionari": 52, "hint": [52, 82, 110], "tsunami": [52, 55, 114, 166], "hazard": 52, "model": [52, 75, 113, 114, 166], "water": [53, 102, 141, 154], "depth": 53, "surfac": [53, 144], "elev": [53, 70, 144], "latitud": [53, 55], "longitud": [53, 55], "ax": 53, "keep": 54, "track": [54, 64], "googl": 55, "earth": 55, "basic": [55, 87, 100], "requir": [55, 167], "option": [55, 61, 84, 99, 101], "gdal": 55, "librari": [55, 67], "chile": 55, "2010": [55, 79], "need": 55, "plotdata": 55, "plotfigur": 55, "figur": [55, 82], "plotax": 55, "plotitem": 55, "overlai": 55, "addit": [55, 149, 151], "kml": 55, "kmz": 55, "tile": 55, "faster": 55, "load": 55, "remov": 55, "alias": 55, "artifact": 55, "multipl": 55, "resolut": [55, 170], "publish": 55, "gpu": 56, "netcdf": [57, 73, 77, 97, 162], "tag": 58, "configur": 58, "doc": 58, "releas": [58, 59, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138], "To": 58, "major": 58, "extra": 58, "built": [58, 93], "sphinx": [58, 155], "page": 58, "do": 59, "prepar": 59, "number": 59, "candid": 59, "tar": [59, 61], "final": 59, "pypi": 59, "zenodo": 59, "open": 59, "scienc": 59, "framework": 59, "osf": 59, "app": 59, "next": [60, 61, 62, 105], "step": [60, 61, 62, 105, 167], "pip": [62, 85, 165], "quick": [62, 113, 114], "experi": 62, "directori": [62, 66, 74, 82], "troubleshoot": [62, 107, 165], "kmltool": 63, "lagrangian": 64, "particl": 64, "altern": 64, "duplic": 66, "base": 66, "sourc": [66, 75, 101, 154, 159, 166, 167, 170], "name": [66, 67], "replac": 67, "same": 67, "man": 68, "friction": 68, "term": [68, 101, 154, 167, 170], "mapc2p": 69, "march": 70, "front": 70, "argument": 70, "mask": 70, "topofil": 70, "region": [70, 115, 142, 151], "previous_pts_chosen": 70, "below": 70, "given": 70, "buffer": 70, "zone": 70, "along": 70, "shore": 70, "onli": 70, "write": [70, 101, 116, 142], "indic": [70, 96], "determin": 70, "area": 70, "mhw": 70, "matlab": 71, "search": 71, "path": [71, 111], "plotclaw": 71, "afterfram": 71, "help": 71, "found": 71, "maxfram": 71, "nearshor": 72, "copi": 74, "exist": 74, "earthquak": [75, 166], "fault": 75, "slip": 75, "okada": 75, "rectangular": 75, "subfault": 75, "kinemat": 75, "ruptur": 75, "triangular": 75, "openmp": 76, "sytl": 77, "ascii": [77, 97], "fort": [77, 82], "t0002": 77, "q0002": 77, "raw": 77, "binari": [77, 97], "aux": [77, 88], "which": [78, 111], "should": 78, "i": [78, 98], "interfac": 78, "parallel": [78, 94, 99, 100, 106], "comput": [78, 139], "photo": 79, "2016": 79, "univers": 79, "washington": 79, "2015": 79, "utah": 79, "2014": 79, "hpc3": 79, "kaust": 79, "2013": 79, "claw": [79, 146], "dev": 79, "uw": 79, "2012": 79, "2011": 79, "hack": 79, "post": 81, "fly": 81, "faq": 82, "what": [82, 84, 98, 141], "": [82, 93, 104, 141, 170], "make": [82, 99, 153, 165], "how": [82, 84, 98], "someth": 82, "than": 82, "q": 82, "add": 82, "anoth": 82, "curv": 82, "e": 82, "g": 82, "true": 82, "solut": [82, 88, 103], "titl": 82, "outdir": 82, "item": 82, "provid": 82, "size": 82, "background": 82, "color": 82, "colormap": 82, "pcolor": 82, "contourf": 82, "debug": [82, 149], "latex": 84, "interact": [84, 93], "iplotclaw": 84, "access": 84, "printfram": 84, "oper": 85, "contributor": 86, "understand": 88, "class": [88, 91, 158], "simul": 88, "creation": 88, "control": [88, 91, 108], "deriv": [88, 98], "quantiti": [88, 98], "port": 89, "cloud": 90, "sage": 90, "math": 90, "limit": 92, "tvd": 92, "cfl": 92, "independ": 92, "depend": [92, 105], "geometri": 94, "serial": [94, 106, 116], "object": [94, 147], "domain": [94, 108], "patch": 94, "petclaw": [94, 106], "go": 95, "further": 95, "featur": 96, "fileio": 97, "hdf5": 97, "frame": 98, "when": 98, "save": [98, 153], "written": 98, "where": 98, "petsc": 99, "correctli": 99, "pass": 99, "script": 101, "auxiliari": 101, "acoust": [102, 108], "advect": 102, "burger": 102, "euler": 102, "shallow": [102, 141, 154], "sharpclaw": 104, "custom": [104, 140], "bc": 104, "signatur": 104, "numpi": 105, "matplotlib": 105, "obtain": 105, "nose": 105, "state": 106, "order": 107, "solv": 108, "drop": 110, "support": [110, 130], "7": [110, 130, 131], "whichclaw": 111, "wa": 111, "import": 111, "sy": 111, "easi": 111, "pth": 111, "pythonpath": [111, 146], "qinit": [112, 151, 162], "storm": [113, 151, 158, 159], "surg": [113, 159], "criteria": 115, "flag2refin": 115, "richardson": 115, "extrapol": 115, "implement": 115, "regress": 116, "travi": 116, "continu": 116, "integr": 116, "diff": 116, "chardiff": 116, "comparison": 116, "imagediff": 116, "pixel": 116, "simultan": 116, "doctest": 116, "note": [117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138], "10": 118, "global": 125, "8": [132, 133, 134], "checkpoint": 139, "after": 139, "dimension": 140, "pointwis": 140, "f": [140, 170], "layer": 141, "potenti": 141, "miss": 141, "demonstr": 141, "roe": 141, "hll": 141, "relat": 142, "convex": 142, "polygon": 142, "d": 142, "slu": 142, "bounding_box": 142, "mask_outsid": 142, "instanti": 142, "make_kml": 142, "cover": 142, "select": 142, "continent": 142, "shelf": 142, "sea_level": 143, "eta": 144, "init": 144, "spatial": [144, 167], "vari": [144, 167], "behavior": 144, "adjust": [144, 151], "sea": [144, 151], "seismic": 144, "deform": 144, "case": 144, "setaux": [145, 167], "desir": 147, "time": [148, 149, 151, 161, 167], "print": 149, "geo": 151, "fixedgrid": 151, "maximum": 151, "arriv": 151, "share": 153, "local": 155, "src1d": [156, 167], "src": [157, 167], "statist": 161, "download": 162, "displac": 162, "topo": 163, "topotool": 164, "f2py": 165, "ex": 165, "bathymetri": 166, "dart": 166, "buoi": 166, "tide": 166, "done": 167, "befor": 167, "visit": 168, "virtual": 169, "propag": 170, "godunov": 170, "high": 170, "formul": 170, "capac": 170}, "envversion": {"sphinx.domains.c": 2, "sphinx.domains.changeset": 1, "sphinx.domains.citation": 1, "sphinx.domains.cpp": 8, "sphinx.domains.index": 1, "sphinx.domains.javascript": 2, "sphinx.domains.math": 2, "sphinx.domains.python": 3, "sphinx.domains.rst": 2, "sphinx.domains.std": 2, "sphinx": 57}, "alltitles": {"ClawPlotAxes": [[0, "clawplotaxes"]], "Attributes": [[0, "attributes"], [1, "attributes"], [2, "attributes"], [3, "attributes"]], "Attributes for gauge plots": [[0, "attributes-for-gauge-plots"]], "Methods": [[0, "methods"], [1, "methods"], [2, "methods"], [3, "methods"]], "ClawPlotData": [[1, "clawplotdata"]], "ClawPlotFigure": [[2, "clawplotfigure"]], "ClawPlotItem": [[3, "clawplotitem"]], "Special attributes for all 1d plots,  plot_type = \u20181d\u2026\u2019": [[3, "special-attributes-for-all-1d-plots-plot-type-1d"]], "Special attributes for plot_type = \u20181d_plot\u2019": [[3, "special-attributes-for-plot-type-1d-plot"]], "Special attributes for plot_type = \u20181d_fill_between\u2019": [[3, "special-attributes-for-plot-type-1d-fill-between"]], "Special attributes for plot_type = \u20181d_from_2d_data\u2019": [[3, "special-attributes-for-plot-type-1d-from-2d-data"]], "Special attributes for all 2d plots,  plot_type = \u20182d\u2026\u2019": [[3, "special-attributes-for-all-2d-plots-plot-type-2d"]], "Special attributes for plot_type = \u20182d_contour\u2019": [[3, "special-attributes-for-plot-type-2d-contour"]], "Special attributes for plot_type = \u20182d_pcolor\u2019": [[3, "special-attributes-for-plot-type-2d-pcolor"]], "Special attributes for plot_type = \u20182d_imshow\u2019": [[3, "special-attributes-for-plot-type-2d-imshow"]], "Special attributes for plot_type = \u20182d_hillshade\u2019": [[3, "special-attributes-for-plot-type-2d-hillshade"]], "AMR Attributes": [[3, "amr-attributes"]], "Colorbar attributes": [[3, "colorbar-attributes"]], "About this software": [[4, "about-this-software"]], "License": [[4, "license"], [65, "license"], [86, "license"]], "Authors": [[4, "authors"]], "Citing this work": [[4, "citing-this-work"]], "Funding": [[4, "funding"], [86, "funding"]], "Guiding AMR with adjoint flagging": [[5, "guiding-amr-with-adjoint-flagging"]], "Using adjoint flagging in GeoClaw": [[5, "using-adjoint-flagging-in-geoclaw"]], "Adaptive mesh refinement (AMR) algorithms": [[6, "adaptive-mesh-refinement-amr-algorithms"]], "Ghost cells and boundary conditions for AMR": [[6, "ghost-cells-and-boundary-conditions-for-amr"]], "Choosing and initializing finer grids": [[6, "choosing-and-initializing-finer-grids"]], "Flagging cells for refinement": [[6, "flagging-cells-for-refinement"]], "For more details": [[6, "for-more-details"]], "AMRClaw Description and Detailed Contents": [[7, "amrclaw-description-and-detailed-contents"]], "AMRClaw for 1d problems": [[8, "amrclaw-for-1d-problems"]], "Old approach, deprecated:": [[8, "old-approach-deprecated"]], "Doxygen documentation of AMRClaw": [[9, "doxygen-documentation-of-amrclaw"]], "AMRClaw Flowcharts": [[10, "amrclaw-flowcharts"]], "Application documentation": [[11, "application-documentation"]], "Converting README.rst to README.html": [[11, "converting-readme-rst-to-readme-html"]], "Converting code to html with clawcode2html": [[11, "converting-code-to-html-with-clawcode2html"]], "Clawpack Applications repository": [[12, "clawpack-applications-repository"]], "Jupyter Notebooks": [[12, "jupyter-notebooks"]], "Submodules": [[12, "submodules"]], "Examples included with Clawpack": [[12, "examples-included-with-clawpack"]], "Amazon Web Services EC2 Clawpack AMI": [[13, "amazon-web-services-ec2-clawpack-ami"]], "Finding the Clawpack AMI": [[13, "finding-the-clawpack-ami"]], "Launching an instance": [[13, "launching-an-instance"]], "Logging on to your instance": [[13, "logging-on-to-your-instance"]], "Using Clawpack": [[13, "using-clawpack"]], "Viewing plots of results": [[13, "viewing-plots-of-results"]], "Viewing webpages directly from your instance": [[13, "viewing-webpages-directly-from-your-instance"]], "Transferring files to/from your instance": [[13, "transferring-files-to-from-your-instance"]], "Stopping your instance": [[13, "stopping-your-instance"]], "Creating your own AMI": [[13, "creating-your-own-ami"]], "b4run function": [[14, "b4run-function"]], "b4step default routines": [[15, "b4step-default-routines"]], "b4step routine in GeoClaw": [[15, "b4step-routine-in-geoclaw"]], "Boundary conditions": [[16, "boundary-conditions"], [170, "boundary-conditions"]], "Boundary conditions for adaptive refinement": [[16, "boundary-conditions-for-adaptive-refinement"]], "Boundary conditions for GeoClaw": [[16, "boundary-conditions-for-geoclaw"]], "Boundary conditions for clamshell grids on the sphere": [[16, "boundary-conditions-for-clamshell-grids-on-the-sphere"]], "User-defined boundary conditions": [[16, "user-defined-boundary-conditions"]], "Bibliography": [[17, "bibliography"]], "Papers describing the Clawpack software and algorithms": [[17, "papers-describing-the-clawpack-software-and-algorithms"]], "Papers describing applications": [[17, "papers-describing-applications"]], "Other references": [[17, "other-references"]], "Boussinesq solvers in One Space Dimension": [[18, "boussinesq-solvers-in-one-space-dimension"]], "Using the 1d Boussinesq code": [[18, "using-the-1d-boussinesq-code"]], "Makefile": [[18, "makefile"], [19, "makefile"]], "setrun.py": [[18, "setrun-py"], [19, "setrun-py"]], "Boussinesq solvers in Two Space Dimensions": [[19, "boussinesq-solvers-in-two-space-dimensions"]], "Boussinesq-type dispersive equations": [[19, "boussinesq-type-dispersive-equations"]], "The SGN equations": [[19, "the-sgn-equations"]], "The Madsen-Sorensen (MS) equations": [[19, "the-madsen-sorensen-ms-equations"]], "Using the 2d Boussinesq code": [[19, "using-the-2d-boussinesq-code"]], "Prerequisites for the 2d Boussinesq code": [[19, "prerequisites-for-the-2d-boussinesq-code"]], "Wave breaking and switching to SWE": [[19, "wave-breaking-and-switching-to-swe"]], "Examples": [[19, "examples"], [42, "examples"], [47, "examples"], [70, "examples"], [96, "examples"], [142, "examples"]], "Changes to master since v5.9.2": [[20, "changes-to-master-since-v5-9-2"]], "Changes that are not backward compatible": [[20, "changes-that-are-not-backward-compatible"], [118, "changes-that-are-not-backward-compatible"], [127, "changes-that-are-not-backward-compatible"], [128, "changes-that-are-not-backward-compatible"], [129, "changes-that-are-not-backward-compatible"], [130, "changes-that-are-not-backward-compatible"], [131, "changes-that-are-not-backward-compatible"], [132, "changes-that-are-not-backward-compatible"], [133, "changes-that-are-not-backward-compatible"], [134, "changes-that-are-not-backward-compatible"], [135, "changes-that-are-not-backward-compatible"]], "General changes": [[20, "general-changes"], [127, "general-changes"], [128, "general-changes"], [129, "general-changes"], [130, "general-changes"], [131, "general-changes"], [132, "general-changes"], [133, "general-changes"], [134, "general-changes"], [135, "general-changes"], [137, "general-changes"]], "Changes to classic": [[20, "changes-to-classic"], [118, "changes-to-classic"], [119, "changes-to-classic"], [120, "changes-to-classic"], [121, "changes-to-classic"], [122, "changes-to-classic"], [123, "changes-to-classic"], [124, "changes-to-classic"], [125, "changes-to-classic"], [126, "changes-to-classic"], [127, "changes-to-classic"], [128, "changes-to-classic"], [129, "changes-to-classic"], [130, "changes-to-classic"], [131, "changes-to-classic"], [132, "changes-to-classic"], [133, "changes-to-classic"], [134, "changes-to-classic"], [135, "changes-to-classic"], [136, "changes-to-classic"], [137, "changes-to-classic"]], "Changes to clawutil": [[20, "changes-to-clawutil"], [118, "changes-to-clawutil"], [119, "changes-to-clawutil"], [120, "changes-to-clawutil"], [121, "changes-to-clawutil"], [122, "changes-to-clawutil"], [123, "changes-to-clawutil"], [124, "changes-to-clawutil"], [125, "changes-to-clawutil"], [126, "changes-to-clawutil"], [127, "changes-to-clawutil"], [128, "changes-to-clawutil"], [129, "changes-to-clawutil"], [130, "changes-to-clawutil"], [131, "changes-to-clawutil"], [132, "changes-to-clawutil"], [133, "changes-to-clawutil"], [134, "changes-to-clawutil"], [135, "changes-to-clawutil"], [136, "changes-to-clawutil"], [137, "changes-to-clawutil"]], "Changes to visclaw": [[20, "changes-to-visclaw"], [118, "changes-to-visclaw"], [119, "changes-to-visclaw"], [120, "changes-to-visclaw"], [121, "changes-to-visclaw"], [122, "changes-to-visclaw"], [123, "changes-to-visclaw"], [124, "changes-to-visclaw"], [125, "changes-to-visclaw"], [126, "changes-to-visclaw"], [127, "changes-to-visclaw"], [128, "changes-to-visclaw"], [129, "changes-to-visclaw"], [130, "changes-to-visclaw"], [131, "changes-to-visclaw"], [132, "changes-to-visclaw"], [133, "changes-to-visclaw"], [134, "changes-to-visclaw"], [135, "changes-to-visclaw"], [136, "changes-to-visclaw"], [137, "changes-to-visclaw"]], "Changes to riemann": [[20, "changes-to-riemann"], [118, "changes-to-riemann"], [119, "changes-to-riemann"], [120, "changes-to-riemann"], [121, "changes-to-riemann"], [122, "changes-to-riemann"], [123, "changes-to-riemann"], [124, "changes-to-riemann"], [125, "changes-to-riemann"], [126, "changes-to-riemann"], [127, "changes-to-riemann"], [128, "changes-to-riemann"], [129, "changes-to-riemann"], [130, "changes-to-riemann"], [131, "changes-to-riemann"], [132, "changes-to-riemann"], [133, "changes-to-riemann"], [134, "changes-to-riemann"], [135, "changes-to-riemann"], [136, "changes-to-riemann"], [137, "changes-to-riemann"]], "Changes to amrclaw": [[20, "changes-to-amrclaw"], [118, "changes-to-amrclaw"], [119, "changes-to-amrclaw"], [120, "changes-to-amrclaw"], [121, "changes-to-amrclaw"], [122, "changes-to-amrclaw"], [123, "changes-to-amrclaw"], [124, "changes-to-amrclaw"], [125, "changes-to-amrclaw"], [126, "changes-to-amrclaw"], [127, "changes-to-amrclaw"], [128, "changes-to-amrclaw"], [129, "changes-to-amrclaw"], [130, "changes-to-amrclaw"], [131, "changes-to-amrclaw"], [132, "changes-to-amrclaw"], [133, "changes-to-amrclaw"], [134, "changes-to-amrclaw"], [135, "changes-to-amrclaw"], [136, "changes-to-amrclaw"], [137, "changes-to-amrclaw"]], "Changes to geoclaw": [[20, "changes-to-geoclaw"], [118, "changes-to-geoclaw"], [119, "changes-to-geoclaw"], [120, "changes-to-geoclaw"], [121, "changes-to-geoclaw"], [122, "changes-to-geoclaw"], [123, "changes-to-geoclaw"], [124, "changes-to-geoclaw"], [125, "changes-to-geoclaw"], [126, "changes-to-geoclaw"], [127, "changes-to-geoclaw"], [128, "changes-to-geoclaw"], [129, "changes-to-geoclaw"], [130, "changes-to-geoclaw"], [131, "changes-to-geoclaw"], [132, "changes-to-geoclaw"], [133, "changes-to-geoclaw"], [134, "changes-to-geoclaw"], [135, "changes-to-geoclaw"], [136, "changes-to-geoclaw"], [137, "changes-to-geoclaw"]], "Changes to PyClaw": [[20, "changes-to-pyclaw"], [117, "changes-to-pyclaw"], [118, "changes-to-pyclaw"], [119, "changes-to-pyclaw"], [120, "changes-to-pyclaw"], [121, "changes-to-pyclaw"], [122, "changes-to-pyclaw"], [123, "changes-to-pyclaw"], [124, "changes-to-pyclaw"], [125, "changes-to-pyclaw"], [126, "changes-to-pyclaw"], [127, "changes-to-pyclaw"], [128, "changes-to-pyclaw"], [129, "changes-to-pyclaw"], [130, "changes-to-pyclaw"], [131, "changes-to-pyclaw"], [132, "changes-to-pyclaw"], [133, "changes-to-pyclaw"], [134, "changes-to-pyclaw"], [135, "changes-to-pyclaw"], [136, "changes-to-pyclaw"], [137, "changes-to-pyclaw"]], "Other Clawpack Repositories": [[20, "other-clawpack-repositories"], [118, "other-clawpack-repositories"], [126, "other-clawpack-repositories"], [127, "other-clawpack-repositories"], [128, "other-clawpack-repositories"], [129, "other-clawpack-repositories"], [130, "other-clawpack-repositories"], [131, "other-clawpack-repositories"], [132, "other-clawpack-repositories"], [133, "other-clawpack-repositories"], [134, "other-clawpack-repositories"], [135, "other-clawpack-repositories"], [136, "other-clawpack-repositories"], [137, "other-clawpack-repositories"]], "Converting from Clawpack 4.3 to 4.6": [[21, "converting-from-clawpack-4-3-to-4-6"]], "Converting from Clawpack 4.6 to 5.0": [[22, "converting-from-clawpack-4-6-to-5-0"]], "Python conversion tool": [[22, "python-conversion-tool"]], "Clawpack 4.x links": [[23, "clawpack-4-x-links"]], "Changes in Clawpack 5.0": [[24, "changes-in-clawpack-5-0"]], "PyClaw in 5.0": [[24, "pyclaw-in-5-0"]], "Fortran package changes": [[24, "fortran-package-changes"]], "Changes to input parameters in setrun.py from 4.x to 5.0": [[24, "changes-to-input-parameters-in-setrun-py-from-4-x-to-5-0"]], "Changes to general parameters": [[24, "changes-to-general-parameters"]], "Changes to AMR parameters": [[24, "changes-to-amr-parameters"]], "Changes to GeoClaw parameters": [[24, "changes-to-geoclaw-parameters"]], "Changes to plotting routines": [[24, "changes-to-plotting-routines"]], "Clawpack components": [[25, "clawpack-components"]], "Other repositories": [[25, "other-repositories"]], "Clawpack Community": [[26, "clawpack-community"]], "User Workshops, Clinics, and Tutorials": [[26, "user-workshops-clinics-and-tutorials"]], "Available for streaming": [[26, "available-for-streaming"]], "Upcoming": [[26, "upcoming"], [26, "id1"]], "Recent": [[26, "recent"]], "Developer Workshops and Sprint Sessions": [[26, "developer-workshops-and-sprint-sessions"]], "Previous": [[26, "previous"]], "Other Clawpack events": [[26, "other-clawpack-events"]], "Contents": [[27, "id1"], [30, "contents"], [42, "contents"], [70, "contents"], [82, "contents"], [88, "contents"], [98, "contents"], [104, "contents"], [116, "contents"], [142, "contents"]], "Full Table of Contents": [[27, "full-table-of-contents"]], "Overview and Getting Started": [[27, "overview-and-getting-started"]], "Examples and Applications": [[27, "examples-and-applications"]], "Classic, AMRClaw, and GeoClaw": [[27, "classic-amrclaw-and-geoclaw"]], "Using the Fortran codes": [[27, "using-the-fortran-codes"]], "AMRClaw: adaptive mesh refinement": [[27, "amrclaw-adaptive-mesh-refinement"]], "GeoClaw: geophysical flows": [[27, "geoclaw-geophysical-flows"]], "PyClaw": [[27, "pyclaw"], [38, "pyclaw"], [96, "pyclaw"], [116, "pyclaw"], [160, "pyclaw"]], "Riemann": [[27, "riemann"]], "VisClaw: Plotting and Visualization Tools": [[27, "visclaw-plotting-and-visualization-tools"]], "Migrating applications from older versions of Clawpack": [[27, "migrating-applications-from-older-versions-of-clawpack"]], "Developers\u2019 resources": [[27, "developers-resources"]], "References": [[27, "references"], [56, "references"]], "Contributing examples and applications": [[28, "contributing-examples-and-applications"]], "current_data": [[29, "current-data"]], "Attributes of current_data:": [[29, "attributes-of-current-data"]], "Developers\u2019 Guide": [[30, "developers-guide"]], "Guidelines for contributing": [[30, "guidelines-for-contributing"]], "Reporting and fixing bugs": [[30, "reporting-and-fixing-bugs"]], "Developer communication": [[30, "developer-communication"]], "Installation instructions for developers": [[30, "installation-instructions-for-developers"]], "Cloning the most recent code from Github": [[30, "cloning-the-most-recent-code-from-github"]], "Checking out the master branch on each repository": [[30, "checking-out-the-master-branch-on-each-repository"]], "Updating to the latest master branch": [[30, "updating-to-the-latest-master-branch"]], "Never commit to master": [[30, "never-commit-to-master"]], "Adding your fork as a remote": [[30, "adding-your-fork-as-a-remote"]], "Modifying code": [[30, "modifying-code"]], "Issuing a pull request": [[30, "issuing-a-pull-request"]], "Testing a pull request": [[30, "testing-a-pull-request"]], "Top-level pull requests": [[30, "top-level-pull-requests"]], "Git workflow": [[30, "git-workflow"]], "Catching errors with Pyflakes and Pylint": [[30, "catching-errors-with-pyflakes-and-pylint"]], "Checking test coverage": [[30, "checking-test-coverage"]], "Trouble-Shooting Tips": [[30, "trouble-shooting-tips"]], "Docker for Clawpack": [[31, "docker-for-clawpack"]], "Using Version 5.9.0 or above": [[31, "using-version-5-9-0-or-above"]], "Getting started": [[31, "getting-started"]], "Stopping a container": [[31, "stopping-a-container"]], "Restarting a container": [[31, "restarting-a-container"]], "Running Jupyter notebooks": [[31, "running-jupyter-notebooks"]], "Moving files between the docker container and the host machine": [[31, "moving-files-between-the-docker-container-and-the-host-machine"]], "Some other useful docker commands": [[31, "some-other-useful-docker-commands"]], "Creating your own docker image": [[31, "creating-your-own-docker-image"]], "Dockerfiles for binder": [[31, "dockerfiles-for-binder"]], "dtopotools module for moving topography": [[32, "dtopotools-module-for-moving-topography"]], "Documentation auto-generated from the module docstrings": [[32, "module-clawpack.geoclaw.dtopotools"], [35, "module-clawpack.geoclaw.fgmax_tools"], [37, "module-clawpack.geoclaw.fgout_tools"], [51, "module-clawpack.geoclaw.util"], [63, "module-clawpack.geoclaw.kmltools"], [164, "module-clawpack.geoclaw.topotools"]], "Fortran 77 vs. Fortran 90 files": [[33, "fortran-77-vs-fortran-90-files"]], "Fixed grid monitoring (fgmax)": [[34, "fixed-grid-monitoring-fgmax"]], "Input file specification": [[34, "input-file-specification"], [36, "input-file-specification"]], "Different point styles": [[34, "different-point-styles"]], "Other attributes": [[34, "other-attributes"]], "Values to monitor": [[34, "values-to-monitor"]], "Choice of interpolation procedure": [[34, "choice-of-interpolation-procedure"], [36, "choice-of-interpolation-procedure"]], "A simple example": [[34, "a-simple-example"], [36, "a-simple-example"]], "Processing and plotting fgmax output": [[34, "processing-and-plotting-fgmax-output"]], "Format of the output files": [[34, "format-of-the-output-files"]], "fgmax examples": [[34, "fgmax-examples"]], "fgmax_tools module for working with fgmax grids": [[35, "fgmax-tools-module-for-working-with-fgmax-grids"]], "Fixed grid output (fgout)": [[36, "fixed-grid-output-fgout"]], "Format of fgout output": [[36, "format-of-fgout-output"]], "Using setplot.py to produce plots": [[36, "using-setplot-py-to-produce-plots"]], "Reading and plotting fgout arrays directly": [[36, "reading-and-plotting-fgout-arrays-directly"]], "fgout grid registration": [[36, "fgout-grid-registration"]], "fgout examples": [[36, "fgout-examples"]], "fgout_tools module for working with fgout grids": [[37, "fgout-tools-module-for-working-with-fgout-grids"]], "Running an example": [[38, "running-an-example"], [39, "running-an-example"], [40, "running-an-example"]], "Classic": [[38, "classic"], [39, "classic"], [160, "classic"]], "Testing your Fortran installation and running an example": [[39, "testing-your-fortran-installation-and-running-an-example"]], "More examples": [[39, "more-examples"]], "Testing a PyClaw installation and running an example": [[40, "testing-a-pyclaw-installation-and-running-an-example"]], "From the Jupyter notebook": [[40, "from-the-jupyter-notebook"]], "From the IPython interpreter": [[40, "from-the-ipython-interpreter"]], "From the command line": [[40, "from-the-command-line"], [93, "from-the-command-line"]], "Specifying flagregions for adaptive refinement": [[41, "specifying-flagregions-for-adaptive-refinement"]], "Using ruled rectangles as flagregions": [[41, "using-ruled-rectangles-as-flagregions"]], "Force Cells to be Dry Initially": [[42, "force-cells-to-be-dry-initially"]], "Sample topography from a 1/3 arcsecond DEM": [[42, "sample-topography-from-a-1-3-arcsecond-dem"], [70, "sample-topography-from-a-1-3-arcsecond-dem"]], "Creating the force_dry_init array": [[42, "creating-the-force-dry-init-array"]], "Create file to read into GeoClaw": [[42, "create-file-to-read-into-geoclaw"]], "Usage in GeoClaw Fortran code": [[42, "usage-in-geoclaw-fortran-code"]], "Internal GeoClaw modifications": [[42, "internal-geoclaw-modifications"]], "Fortran version": [[43, "fortran-version"]], "Makefiles": [[43, "makefiles"]], "More tips": [[43, "more-tips"]], "Fortran Compilers": [[44, "fortran-compilers"]], "FC environment variable": [[44, "fc-environment-variable"]], "FFLAGS environment variable": [[44, "fflags-environment-variable"]], "LFLAGS environment variable": [[44, "lflags-environment-variable"]], "Pre-Processor and the PPFLAGS environment variable": [[44, "pre-processor-and-the-ppflags-environment-variable"]], "gfortran compiler": [[44, "gfortran-compiler"]], "Intel fortran compiler": [[44, "intel-fortran-compiler"]], "Examples from the book FVMHP": [[45, "examples-from-the-book-fvmhp"]], "Available examples": [[45, "available-examples"]], "YouTube Videos": [[45, "youtube-videos"]], "Clawpack Gallery": [[46, "clawpack-gallery"]], "Gauges": [[47, "gauges"]], "Gauge parameters in setrun": [[47, "gauge-parameters-in-setrun"]], "Plotting tools": [[47, "plotting-tools"]], "Plotting gauge locations": [[47, "plotting-gauge-locations"]], "GeoClaw Description and Detailed Contents": [[48, "geoclaw-description-and-detailed-contents"]], "GeoClaw in One Space Dimension": [[49, "geoclaw-in-one-space-dimension"]], "Coordinate systems": [[49, "coordinate-systems"]], "Uniform and mapped grids": [[49, "uniform-and-mapped-grids"]], "Topograpy data": [[49, "topograpy-data"]], "Moving topograpy (dtopo) data": [[49, "moving-topograpy-dtopo-data"]], "Getting started with GeoClaw": [[50, "getting-started-with-geoclaw"]], "Running a GeoClaw code": [[50, "running-a-geoclaw-code"]], "Topography": [[50, "topography"]], "Plotting GeoClaw results": [[50, "plotting-geoclaw-results"]], "Setting up a new example": [[50, "setting-up-a-new-example"]], "geoclaw.util module of utility functions": [[51, "geoclaw-util-module-of-utility-functions"]], "Cautionary Hints on using GeoClaw": [[52, "cautionary-hints-on-using-geoclaw"]], "Tsunami hazard modeling": [[52, "tsunami-hazard-modeling"]], "GeoClaw plotting tools": [[53, "geoclaw-plotting-tools"]], "Plotting water depth or surface elevation": [[53, "plotting-water-depth-or-surface-elevation"]], "Tips on latitude-longitude coordinate axes": [[53, "tips-on-latitude-longitude-coordinate-axes"]], "Keeping track of repository versions with Git": [[54, "keeping-track-of-repository-versions-with-git"]], "Visualizing GeoClaw results in Google Earth": [[55, "visualizing-geoclaw-results-in-google-earth"]], "Basic requirements": [[55, "basic-requirements"]], "Optional GDAL library": [[55, "optional-gdal-library"]], "An example : The Chile 2010 tsunami event": [[55, "an-example-the-chile-2010-tsunami-event"]], "Plotting attributes needed for Google Earth": [[55, "plotting-attributes-needed-for-google-earth"]], "plotdata attributes": [[55, "plotdata-attributes"]], "plotfigure attributes": [[55, "plotfigure-attributes"]], "Creating the figures": [[55, "creating-the-figures"]], "plotaxes attributes": [[55, "plotaxes-attributes"]], "plotitem attributes": [[55, "plotitem-attributes"]], "Adding a colorbar overlay": [[55, "adding-a-colorbar-overlay"]], "Gauge plots": [[55, "gauge-plots"]], "Additional plotdata attributes": [[55, "additional-plotdata-attributes"]], "Plotting tips": [[55, "plotting-tips"]], "KML and KMZ files": [[55, "kml-and-kmz-files"]], "Tiling images for faster loading": [[55, "tiling-images-for-faster-loading"]], "Removing aliasing artifacts": [[55, "removing-aliasing-artifacts"]], "Creating multiple figures at different resolutions": [[55, "creating-multiple-figures-at-different-resolutions"]], "Mapping topography data to latitude/longitude coordinates": [[55, "mapping-topography-data-to-latitude-longitude-coordinates"]], "Publishing your results": [[55, "id1"]], "Using the GPU version of Clawpack": [[56, "using-the-gpu-version-of-clawpack"]], "Grid registration": [[57, "grid-registration"]], "NetCDF files": [[57, "netcdf-files"]], "Guide for updating this documentation": [[58, "guide-for-updating-this-documentation"]], "Git branches and tags": [[58, "git-branches-and-tags"]], "Configuration and style files": [[58, "configuration-and-style-files"]], "Updating the docs for a new release": [[58, "updating-the-docs-for-a-new-release"]], "To generate docs including previous versions": [[58, "to-generate-docs-including-previous-versions"]], "Updating for a new major version": [[58, "updating-for-a-new-major-version"]], "Updating the gallery": [[58, "updating-the-gallery"]], "Updating the webpages": [[58, "updating-the-webpages"]], "Extra files for webpages not built by Sphinx": [[58, "extra-files-for-webpages-not-built-by-sphinx"]], "Pages from other clawpack repositories": [[58, "pages-from-other-clawpack-repositories"]], "Guide for doing a Clawpack release": [[59, "guide-for-doing-a-clawpack-release"]], "Preparation": [[59, "preparation"]], "Version numbers": [[59, "version-numbers"]], "Release candidates": [[59, "release-candidates"]], "Create a tar file and a Github release": [[59, "create-a-tar-file-and-a-github-release"]], "Final release": [[59, "final-release"]], "Pypi": [[59, "pypi"]], "Zenodo": [[59, "zenodo"]], "Open Science Framework (OSF)": [[59, "open-science-framework-osf"]], "Updating the documentation": [[59, "updating-the-documentation"]], "Updating the apps repository": [[59, "updating-the-apps-repository"]], "Updating the Dockerfile": [[59, "updating-the-dockerfile"]], "Installing Clawpack": [[60, "installing-clawpack"]], "Next steps:": [[60, "next-steps"], [61, "next-steps"], [62, "next-steps"]], "Options for installing Clawpack Fortran codes": [[61, "options-for-installing-clawpack-fortran-codes"]], "tar file": [[61, "tar-file"]], "git clone": [[61, "git-clone"]], "pip install instructions": [[62, "pip-install-instructions"]], "Quick Installation of PyClaw with pip": [[62, "quick-installation-of-pyclaw-with-pip"]], "Quick Installation of all packages with pip": [[62, "quick-installation-of-all-packages-with-pip"]], "Using pip to install a different version": [[62, "using-pip-to-install-a-different-version"]], "Experimenting with code in the examples directories": [[62, "experimenting-with-code-in-the-examples-directories"]], "Troubleshooting pip install": [[62, "troubleshooting-pip-install"]], "kmltools module of utility functions": [[63, "kmltools-module-of-utility-functions"]], "Lagrangian gauges for particle tracking": [[64, "lagrangian-gauges-for-particle-tracking"]], "Specifying Lagrangian Gauges": [[64, "specifying-lagrangian-gauges"]], "Visclaw tools for plotting": [[64, "visclaw-tools-for-plotting"]], "An alternative using fgout grids": [[64, "an-alternative-using-fgout-grids"]], "Clawpack Makefiles": [[66, "clawpack-makefiles"]], "Applications directory Makefiles": [[66, "applications-directory-makefiles"]], "output": [[66, "output"]], "plots": [[66, "plots"]], "Variables": [[66, "variables"]], "Compiler flags": [[66, "compiler-flags"]], "Duplicate Base Source Name": [[66, "duplicate-base-source-name"]], "Library routines in Makefiles": [[67, "library-routines-in-makefiles"]], "Replacing files with the same name as library files": [[67, "replacing-files-with-the-same-name-as-library-files"]], "Using a modified library routine with a different name": [[67, "using-a-modified-library-routine-with-a-different-name"]], "Manning friction term": [[68, "manning-friction-term"]], "The mapc2p function": [[69, "the-mapc2p-function"]], "Marching Front algorithm": [[70, "marching-front-algorithm"]], "Function arguments": [[70, "function-arguments"]], "output array": [[70, "output-array"]], "creating a masked array": [[70, "creating-a-masked-array"]], "topofile mask for initializing dry points": [[70, "topofile-mask-for-initializing-dry-points"]], "fgmax points": [[70, "fgmax-points"]], "flag regions": [[70, "flag-regions"]], "The mask argument": [[70, "the-mask-argument"]], "The previous_pts_chosen argument": [[70, "the-previous-pts-chosen-argument"]], "Finding all points below a given elevation": [[70, "finding-all-points-below-a-given-elevation"]], "Create a buffer zone along shore": [[70, "create-a-buffer-zone-along-shore"]], "Choose points only near shore": [[70, "choose-points-only-near-shore"]], "Write out the masked array indicating fgmax points": [[70, "write-out-the-masked-array-indicating-fgmax-points"]], "Creating an AMR flag region": [[70, "creating-an-amr-flag-region"]], "Determining dry areas below MHW": [[70, "determining-dry-areas-below-mhw"]], "Plotting using Matlab": [[71, "plotting-using-matlab"]], "The Matlab search path": [[71, "the-matlab-search-path"]], "Creating output files": [[71, "creating-output-files"]], "The plotclaw command": [[71, "the-plotclaw-command"]], "The setplot file": [[71, "the-setplot-file"]], "The afterframe file": [[71, "the-afterframe-file"]], "Getting help": [[71, "getting-help"]], "Trouble shooting": [[71, "trouble-shooting"]], "Output files not found": [[71, "output-files-not-found"]], "MaxFrames not set": [[71, "maxframes-not-set"]], "Switching examples": [[71, "switching-examples"]], "Matlab Gallery": [[71, "matlab-gallery"]], "Nearshore interpolation": [[72, "nearshore-interpolation"]], "Using NetCDF output": [[73, "using-netcdf-output"]], "Creating a new application directory": [[74, "creating-a-new-application-directory"]], "Copying an existing example": [[74, "copying-an-existing-example"]], "Earthquake sources: Fault slip and the Okada model": [[75, "earthquake-sources-fault-slip-and-the-okada-model"]], "Fault slip on rectangular subfaults": [[75, "fault-slip-on-rectangular-subfaults"]], "Okada model": [[75, "okada-model"]], "Kinematic rupture": [[75, "kinematic-rupture"]], "Fault slip on triangular subfaults": [[75, "fault-slip-on-triangular-subfaults"]], "Using OpenMP": [[76, "using-openmp"]], "Using OpenMP with AMR": [[76, "using-openmp-with-amr"]], "Fixed grid output in GeoClaw": [[76, "fixed-grid-output-in-geoclaw"]], "Output data sytles and formats": [[77, "output-data-sytles-and-formats"]], "Output style": [[77, "output-style"]], "Output data formats": [[77, "output-data-formats"]], "ASCII output data format": [[77, "ascii-output-data-format"]], "fort.t0002": [[77, "fort-t0002"]], "fort.q0002": [[77, "fort-q0002"]], "Raw binary output data formats": [[77, "raw-binary-output-data-formats"]], "NetCDF output data format": [[77, "netcdf-output-data-format"]], "Output of aux arrays": [[77, "output-of-aux-arrays"]], "Which Clawpack solver should I use?": [[78, "which-clawpack-solver-should-i-use"]], "Installation and user interface": [[78, "installation-and-user-interface"]], "Algorithmic differences": [[78, "algorithmic-differences"]], "Parallel computing": [[78, "parallel-computing"]], "Clawpack Community Photos": [[79, "clawpack-community-photos"]], "2016 Developers\u2019 workshop at University of Washington": [[79, "id1"]], "2015 Developers\u2019 workshop at University of Utah": [[79, "id2"]], "2014 HPC3 workshop at KAUST": [[79, "id3"]], "2013 Claw-Dev workshop at UW": [[79, "id4"]], "2012 HPC3 workshop at KAUST": [[79, "id6"]], "2011 coding sprints at UW": [[79, "coding-sprints-at-uw"]], "2010 GeoClaw hacking UW": [[79, "geoclaw-hacking-uw"]], "Plotting examples": [[80, "plotting-examples"]], "Plotting with Visclaw": [[81, "plotting-with-visclaw"]], "Plotting as post-processing": [[81, "plotting-as-post-processing"]], "Plotting on the fly": [[81, "plotting-on-the-fly"]], "Plotting hints and FAQ": [[82, "plotting-hints-and-faq"]], "What\u2019s the difference between make .plots and make plots ?": [[82, "what-s-the-difference-between-make-plots-and-make-plots"]], "How to plot a something other than a component of q?": [[82, "how-to-plot-a-something-other-than-a-component-of-q"]], "How to add another curve to a plot, e.g. the true solution?": [[82, "how-to-add-another-curve-to-a-plot-e-g-the-true-solution"]], "How to change the title in a plot?": [[82, "how-to-change-the-title-in-a-plot"]], "How to specify outdir, the directory to find fort.* files for plotting?": [[82, "how-to-specify-outdir-the-directory-to-find-fort-files-for-plotting"]], "How to specify a different outdir for some plot item?": [[82, "how-to-specify-a-different-outdir-for-some-plot-item"]], "How to set plot parameters that are not provided as attributes of ClawPlotItem?": [[82, "how-to-set-plot-parameters-that-are-not-provided-as-attributes-of-clawplotitem"]], "How to change the size or background color of a figure?": [[82, "how-to-change-the-size-or-background-color-of-a-figure"]], "Specifying colormaps for pcolor or contourf plots": [[82, "specifying-colormaps-for-pcolor-or-contourf-plots"]], "How to debug setplot.py?": [[82, "how-to-debug-setplot-py"]], "Plotting routines for GeoClaw": [[83, "plotting-routines-for-geoclaw"]], "Plotting options in Python": [[84, "plotting-options-in-python"]], "Producing html plots from the command line": [[84, "producing-html-plots-from-the-command-line"]], "Producing a latex file with plots from the command line": [[84, "producing-a-latex-file-with-plots-from-the-command-line"]], "Setting plot parameters with a setplot function": [[84, "setting-plot-parameters-with-a-setplot-function"]], "Interactive plotting with Iplotclaw": [[84, "interactive-plotting-with-iplotclaw"]], "Access to current_data": [[84, "access-to-current-data"]], "printframes": [[84, "printframes"]], "Specifying what and how to plot": [[84, "specifying-what-and-how-to-plot"]], "Installation Prerequisites": [[85, "installation-prerequisites"]], "Operating system": [[85, "operating-system"]], "Fortran": [[85, "fortran"]], "Python": [[85, "python"]], "pip": [[85, "pip"]], "Git": [[85, "git"]], "About PyClaw": [[86, "about-pyclaw"]], "Contributors": [[86, "contributors"]], "PyClaw Basics": [[87, "pyclaw-basics"]], "Understanding Pyclaw Classes": [[88, "understanding-pyclaw-classes"]], "Flow of a Pyclaw Simulation": [[88, "flow-of-a-pyclaw-simulation"]], "Creation of a Pyclaw Solution": [[88, "creation-of-a-pyclaw-solution"]], "Creation of a Pyclaw Solver": [[88, "creation-of-a-pyclaw-solver"]], "Creating and Running a Simulation with Controller": [[88, "creating-and-running-a-simulation-with-controller"]], "Restarting a simulation": [[88, "restarting-a-simulation"]], "Outputting aux values": [[88, "outputting-aux-values"]], "Outputting derived quantities": [[88, "outputting-derived-quantities"], [98, "outputting-derived-quantities"]], "Porting a problem from Clawpack 4.6.x to PyClaw": [[89, "porting-a-problem-from-clawpack-4-6-x-to-pyclaw"]], "Running PyClaw in the cloud": [[90, "running-pyclaw-in-the-cloud"]], "Sage Math Cloud": [[90, "sage-math-cloud"]], "Pyclaw Controller Class": [[91, "pyclaw-controller-class"]], "pyclaw.controller.Controller": [[91, "pyclaw-controller-controller"]], "Pyclaw Limiters": [[92, "pyclaw-limiters"]], "clawpack.pyclaw.limiters.tvd": [[92, "module-clawpack.pyclaw.limiters.tvd"]], "CFL Independent Limiters": [[92, "cfl-independent-limiters"]], "CFL Dependent Limiters": [[92, "cfl-dependent-limiters"]], "Working with PyClaw\u2019s built-in examples": [[93, "working-with-pyclaw-s-built-in-examples"]], "Running and plotting examples": [[93, "running-and-plotting-examples"]], "Interactively in IPython": [[93, "interactively-in-ipython"]], "Built-in examples": [[93, "built-in-examples"]], "Adding new examples": [[93, "adding-new-examples"]], "PyClaw Geometry": [[94, "pyclaw-geometry"]], "Serial Geometry Objects": [[94, "serial-geometry-objects"]], "pyclaw.geometry.Domain": [[94, "pyclaw-geometry-domain"]], "pyclaw.geometry.Patch": [[94, "pyclaw-geometry-patch"]], "pyclaw.geometry.Grid": [[94, "pyclaw-geometry-grid"]], "pyclaw.geometry.Dimension": [[94, "pyclaw-geometry-dimension"]], "Parallel Geometry Objects": [[94, "parallel-geometry-objects"]], "petclaw.geometry.Domain": [[94, "petclaw-geometry-domain"]], "petclaw.geometry.Patch": [[94, "petclaw-geometry-patch"]], "Going Further": [[95, "going-further"]], "PyClaw installation": [[96, "pyclaw-installation"]], "Features": [[96, "features"]], "PyClaw Documentation": [[96, "pyclaw-documentation"]], "PyClaw Modules reference documentation": [[96, "pyclaw-modules-reference-documentation"]], "Riemann Solvers reference documentation": [[96, "riemann-solvers-reference-documentation"]], "Indices and tables": [[96, "indices-and-tables"]], "Citing PyClaw": [[96, "citing-pyclaw"]], "Pyclaw Input/Output Package": [[97, "pyclaw-input-output-package"]], "pyclaw.fileio.ascii": [[97, "module-clawpack.pyclaw.fileio.ascii"]], "pyclaw.fileio.binary": [[97, "module-clawpack.pyclaw.fileio.binary"]], "pyclaw.fileio.hdf5": [[97, "module-clawpack.pyclaw.fileio.hdf5"]], "pyclaw.fileio.netcdf": [[97, "module-clawpack.pyclaw.fileio.netcdf"]], "PyClaw output": [[98, "pyclaw-output"]], "Output frames": [[98, "output-frames"]], "When output is saved/written": [[98, "when-output-is-saved-written"]], "Where and how output is written": [[98, "where-and-how-output-is-written"]], "What output is written": [[98, "what-output-is-written"]], "Outputting functionals": [[98, "outputting-functionals"]], "Using gauges": [[98, "using-gauges"]], "Logging": [[98, "logging"]], "Running in parallel": [[99, "running-in-parallel"]], "Installing PETSc": [[99, "installing-petsc"]], "Testing your installation": [[99, "testing-your-installation"], [160, "testing-your-installation"]], "Running and plotting an example": [[99, "running-and-plotting-an-example"]], "Tips for making your application run correctly in parallel": [[99, "tips-for-making-your-application-run-correctly-in-parallel"]], "Passing options to PETSc": [[99, "passing-options-to-petsc"]], "Plotting PyClaw results": [[100, "plotting-pyclaw-results"]], "Basics": [[100, "basics"]], "Plotting result from parallel runs": [[100, "plotting-result-from-parallel-runs"]], "Setting up your own problem": [[101, "setting-up-your-own-problem"]], "Writing the initialization script": [[101, "writing-the-initialization-script"]], "Setting initial conditions": [[101, "setting-initial-conditions"]], "Setting auxiliary variables": [[101, "setting-auxiliary-variables"]], "Setting boundary conditions": [[101, "setting-boundary-conditions"]], "Setting solver options": [[101, "setting-solver-options"]], "Using your own Riemann solver": [[101, "using-your-own-riemann-solver"]], "Adding source terms": [[101, "adding-source-terms"]], "Setting up the Makefile": [[101, "setting-up-the-makefile"]], "Riemann Solver Package": [[102, "riemann-solver-package"]], "Acoustics": [[102, "acoustics"]], "Advection": [[102, "advection"]], "Burgers Equation": [[102, "burgers-equation"]], "Euler Equations": [[102, "euler-equations"]], "Shallow Water Equations": [[102, "shallow-water-equations"]], "PyClaw Solutions": [[103, "pyclaw-solutions"]], "pyclaw.solution.Solution": [[103, "pyclaw-solution-solution"]], "Using PyClaw\u2019s solvers: Classic and SharpClaw": [[104, "using-pyclaw-s-solvers-classic-and-sharpclaw"]], "SharpClaw Solvers": [[104, "sharpclaw-solvers"]], "pyclaw.sharpclaw": [[104, "pyclaw-sharpclaw"]], "Pyclaw Classic Clawpack Solvers": [[104, "pyclaw-classic-clawpack-solvers"]], "pyclaw.classic.solver": [[104, "pyclaw-classic-solver"]], "Change to Custom BC Function Signatures": [[104, "change-to-custom-bc-function-signatures"]], "Installing PyClaw": [[105, "installing-pyclaw"]], "Dependencies: Python, gfortran, numpy, and matplotlib": [[105, "dependencies-python-gfortran-numpy-and-matplotlib"]], "Obtaining Python, numpy, and matplotlib": [[105, "obtaining-python-numpy-and-matplotlib"]], "Clawpack": [[105, "clawpack"]], "Testing your installation with nose": [[105, "testing-your-installation-with-nose"]], "Next steps": [[105, "next-steps"]], "PyClaw State": [[106, "pyclaw-state"]], "Serial pyclaw.state.State": [[106, "serial-pyclaw-state-state"]], "Parallel petclaw.state.State": [[106, "parallel-petclaw-state-state"]], "Troubleshooting": [[107, "troubleshooting"], [165, "troubleshooting"]], "Compilation errors": [[107, "compilation-errors"]], "Use Fortran-ordered arrays": [[107, "use-fortran-ordered-arrays"]], "Installation": [[107, "installation"]], "PyClaw tutorial: Solve the acoustics equations": [[108, "pyclaw-tutorial-solve-the-acoustics-equations"]], "The Solver": [[108, "the-solver"]], "The domain": [[108, "the-domain"]], "Initial condition": [[108, "initial-condition"]], "Problem-specific parameters": [[108, "problem-specific-parameters"]], "The controller": [[108, "the-controller"]], "Pyclaw Utility Module": [[109, "pyclaw-utility-module"]], "pyclaw.util": [[109, "module-clawpack.pyclaw.util"]], "Python Hints": [[110, "python-hints"]], "Dropping support for Python 2.7": [[110, "dropping-support-for-python-2-7"]], "References and tutorials": [[110, "references-and-tutorials"]], "Notebooks": [[110, "notebooks"]], "Python path": [[111, "python-path"]], "whichclaw.py": [[111, "whichclaw-py"]], "Which version was imported?": [[111, "which-version-was-imported"]], "sys.path": [[111, "sys-path"]], "easy-install.pth": [[111, "easy-install-pth"]], "PYTHONPATH": [[111, "pythonpath"], [146, "pythonpath"]], "qinit default routines": [[112, "qinit-default-routines"]], "qinit routine in GeoClaw": [[112, "qinit-routine-in-geoclaw"]], "Quick start guide for storm surge modeling": [[113, "quick-start-guide-for-storm-surge-modeling"]], "Quick start guide for tsunami modeling": [[114, "quick-start-guide-for-tsunami-modeling"]], "AMR refinement criteria": [[115, "amr-refinement-criteria"]], "Flagging criteria": [[115, "flagging-criteria"]], "flag2refine": [[115, "flag2refine"]], "Richardson extrapolation": [[115, "richardson-extrapolation"]], "Specifying AMR regions": [[115, "specifying-amr-regions"]], "Implementation": [[115, "implementation"]], "Flagging criteria in GeoClaw": [[115, "flagging-criteria-in-geoclaw"]], "Regression testing": [[116, "regression-testing"]], "Running the tests": [[116, "running-the-tests"], [116, "id2"]], "Fortran codes": [[116, "fortran-codes"]], "Travis continuous integration": [[116, "travis-continuous-integration"]], "Diff tools for checking test output": [[116, "diff-tools-for-checking-test-output"]], "chardiff tool for line-by-line comparison of output files": [[116, "chardiff-tool-for-line-by-line-comparison-of-output-files"]], "imagediff tool for pixel comparison of plots": [[116, "imagediff-tool-for-pixel-comparison-of-plots"]], "Running and writing tests in PyClaw": [[116, "running-and-writing-tests-in-pyclaw"]], "Running serial tests simultaneously": [[116, "running-serial-tests-simultaneously"]], "Running a specific test": [[116, "running-a-specific-test"]], "Doctests": [[116, "doctests"]], "Writing New Tests": [[116, "writing-new-tests"]], "v5.0.0 release notes": [[117, "v5-0-0-release-notes"]], "Changes to classic, riemann, amrclaw, geoclaw, visclaw": [[117, "changes-to-classic-riemann-amrclaw-geoclaw-visclaw"]], "v5.10.0 release notes": [[118, "v5-10-0-release-notes"]], "v5.1.0 release notes": [[119, "v5-1-0-release-notes"]], "v5.2.0 release notes": [[120, "v5-2-0-release-notes"]], "v5.2.1 release notes": [[121, "v5-2-1-release-notes"]], "v5.2.2 release notes": [[122, "v5-2-2-release-notes"]], "v5.3.0 release notes": [[123, "v5-3-0-release-notes"]], "v5.3.1 release notes": [[124, "v5-3-1-release-notes"]], "v5.4.0 release notes": [[125, "v5-4-0-release-notes"]], "Global changes": [[125, "global-changes"]], "v5.4.1 release notes": [[126, "v5-4-1-release-notes"]], "Changes to documentation": [[126, "changes-to-documentation"], [127, "changes-to-documentation"]], "v5.5.0 release notes": [[127, "v5-5-0-release-notes"]], "v5.6.0 release notes": [[128, "v5-6-0-release-notes"]], "v5.6.1 release notes": [[129, "v5-6-1-release-notes"]], "v5.7.0 release notes": [[130, "v5-7-0-release-notes"]], "Python support": [[130, "python-support"]], "v5.7.1 release notes": [[131, "v5-7-1-release-notes"]], "v5.8.0 release notes": [[132, "v5-8-0-release-notes"]], "v5.8.1 release notes": [[133, "v5-8-1-release-notes"]], "v5.8.2 release notes": [[134, "v5-8-2-release-notes"]], "v5.9.0 release notes": [[135, "v5-9-0-release-notes"]], "v5.9.1 release notes": [[136, "v5-9-1-release-notes"]], "v5.9.2 release notes": [[137, "v5-9-2-release-notes"]], "Releases of Clawpack and release notes": [[138, "releases-of-clawpack-and-release-notes"]], "Other notes:": [[138, "other-notes"]], "Releases:": [[138, "id1"]], "Clawpack 4.x": [[138, "clawpack-4-x"]], "Checkpointing and restarting": [[139, "checkpointing-and-restarting"]], "Checkpointing a computation": [[139, "checkpointing-a-computation"]], "Restarting a computation": [[139, "restarting-a-computation"]], "Modifying the Makefile for a restart": [[139, "modifying-the-makefile-for-a-restart"]], "Output files after a restart": [[139, "output-files-after-a-restart"]], "Riemann solvers": [[140, "riemann-solvers"]], "One-dimensional Riemann solver": [[140, "one-dimensional-riemann-solver"]], "Pointwise Riemann solvers": [[140, "pointwise-riemann-solvers"]], "f-wave Riemann solvers": [[140, "f-wave-riemann-solvers"]], "2D Riemann solvers": [[140, "d-riemann-solvers"]], "Using a custom solver": [[140, "using-a-custom-solver"]], "Adding a solver to the Riemann repository": [[140, "adding-a-solver-to-the-riemann-repository"]], "Shallow water Riemann solvers in Clawpack": [[141, "shallow-water-riemann-solvers-in-clawpack"]], "One dimension": [[141, "one-dimension"]], "Two dimensions": [[141, "two-dimensions"]], "Layered shallow water equations": [[141, "layered-shallow-water-equations"]], "Potentially useful contributions (what\u2019s missing)": [[141, "potentially-useful-contributions-whats-missing"]], "Demonstrations": [[141, "demonstrations"]], "Roe": [[141, "roe"]], "HLL": [[141, "hll"]], "Ruled Rectangles": [[142, "ruled-rectangles"]], "Relation to convex polygons": [[142, "relation-to-convex-polygons"]], "Other attributes and methods": [[142, "other-attributes-and-methods"]], "ds": [[142, "ds"]], "slu": [[142, "slu"]], "bounding_box": [[142, "bounding-box"]], "mask_outside": [[142, "mask-outside"]], "read and write, and instantiating from a file": [[142, "read-and-write-and-instantiating-from-a-file"]], "make_kml": [[142, "make-kml"]], "A GeoClaw AMR flag region": [[142, "a-geoclaw-amr-flag-region"]], "A simple rectangle": [[142, "a-simple-rectangle"]], "Defining a Ruled Rectangle covering selected cells": [[142, "defining-a-ruled-rectangle-covering-selected-cells"]], "Example covering the continental shelf": [[142, "example-covering-the-continental-shelf"]], "Setting sea_level": [[143, "setting-sea-level"]], "Set Eta Init \u2013 spatially varying initial surface elevation": [[144, "set-eta-init-spatially-varying-initial-surface-elevation"]], "Default behavior, adjusting sea level by seismic deformation": [[144, "default-behavior-adjusting-sea-level-by-seismic-deformation"]], "Other use cases": [[144, "other-use-cases"]], "setaux default routines": [[145, "setaux-default-routines"]], "setaux routine in GeoClaw": [[145, "setaux-routine-in-geoclaw"]], "Set environment variables": [[146, "set-environment-variables"]], "CLAW": [[146, "claw"]], "FC": [[146, "fc"]], "Using setplot.py to specify the desired plots": [[147, "using-setplot-py-to-specify-the-desired-plots"]], "Plotting Data Objects": [[147, "plotting-data-objects"]], "Overview": [[147, "overview"]], "Specifying classic run-time parameters in setrun.py": [[148, "specifying-classic-run-time-parameters-in-setrun-py"]], "Input": [[148, "input"], [149, "input"]], "Output": [[148, "output"], [149, "output"]], "Run-time parameters": [[148, "run-time-parameters"], [149, "run-time-parameters"]], "Specifying AMRClaw run-time parameters in setrun.py": [[149, "specifying-amrclaw-run-time-parameters-in-setrun-py"]], "Special AMR parameters": [[149, "special-amr-parameters"]], "Debugging flags for additional printing": [[149, "debugging-flags-for-additional-printing"]], "Sample setrun.py module for AMRClaw": [[150, "sample-setrun-py-module-for-amrclaw"]], "Specifying GeoClaw parameters in setrun.py": [[151, "specifying-geoclaw-parameters-in-setrun-py"]], "Additional AMR parameters": [[151, "additional-amr-parameters"]], "General geo parameters": [[151, "general-geo-parameters"]], "Topography data file parameters": [[151, "topography-data-file-parameters"]], "qinit data file parameters": [[151, "qinit-data-file-parameters"]], "Force some cells to be initially dry": [[151, "force-some-cells-to-be-initially-dry"]], "Adjust sea level in some regions": [[151, "adjust-sea-level-in-some-regions"]], "AMR refinement region parameters": [[151, "amr-refinement-region-parameters"]], "Deprecated Fixedgrid output parameters": [[151, "deprecated-fixedgrid-output-parameters"]], "Fixed grid maximum monitoring / arrival times": [[151, "fixed-grid-maximum-monitoring-arrival-times"]], "Fixed grid output": [[151, "fixed-grid-output"]], "Storm Specification Data": [[151, "storm-specification-data"]], "Sample setrun.py module for classic Clawpack": [[152, "sample-setrun-py-module-for-classic-clawpack"]], "Saving and sharing results": [[153, "saving-and-sharing-results"]], "Making webpages of plots": [[153, "making-webpages-of-plots"]], "Sharing your results": [[153, "sharing-your-results"]], "Jupyter notebooks": [[153, "jupyter-notebooks"]], "Source terms for shallow water on the sphere": [[154, "source-terms-for-shallow-water-on-the-sphere"]], "Compiling the Sphinx documentation locally": [[155, "compiling-the-sphinx-documentation-locally"]], "src1d default routines": [[156, "src1d-default-routines"]], "src1d routine in GeoClaw": [[156, "src1d-routine-in-geoclaw"]], "src default routines": [[157, "src-default-routines"]], "src routine in GeoClaw": [[157, "src-routine-in-geoclaw"]], "Storm Specification Class and Tools": [[158, "storm-specification-class-and-tools"]], "Sources for Storm Surge Data": [[159, "sources-for-storm-surge-data"]], "Timing Statistics": [[161, "timing-statistics"]], "Topography data": [[162, "topography-data"]], "Downloading topography files": [[162, "downloading-topography-files"]], "NetCDF format": [[162, "netcdf-format"]], "Topography displacement files": [[162, "topography-displacement-files"]], "qinit data file": [[162, "qinit-data-file"]], "Python tools for working with topo and dtopo": [[163, "python-tools-for-working-with-topo-and-dtopo"]], "topotools module for working with topography data": [[164, "topotools-module-for-working-with-topography-data"]], "Troubleshooting Installation": [[165, "troubleshooting-installation"]], "Troubleshooting Fortran:": [[165, "troubleshooting-fortran"]], "Setting the Fortran compiler to be used by f2py (pip)": [[165, "setting-the-fortran-compiler-to-be-used-by-f2py-pip"]], "Trouble compiling Fortran code at the command line": [[165, "trouble-compiling-fortran-code-at-the-command-line"]], "Trouble running \u201cmake .exe\u201d": [[165, "trouble-running-make-exe"]], "Trouble running \u201cmake .data\u201d": [[165, "trouble-running-make-data"]], "Trouble running \u201cmake .output\u201d": [[165, "trouble-running-make-output"]], "Trouble running \u201cmake .plots\u201d": [[165, "trouble-running-make-plots"]], "Some sources of tsunami data": [[166, "some-sources-of-tsunami-data"]], "Topography / bathymetry": [[166, "topography-bathymetry"]], "Earthquake source models": [[166, "earthquake-source-models"]], "DART buoy data": [[166, "dart-buoy-data"]], "Tide gauges": [[166, "tide-gauges"]], "User files required for the Fortran code": [[167, "user-files-required-for-the-fortran-code"]], "Specifying the initial conditions": [[167, "specifying-the-initial-conditions"]], "Specifying the Riemann solver": [[167, "specifying-the-riemann-solver"]], "Specifying boundary conditions": [[167, "specifying-boundary-conditions"]], "Specifying problem-specific data": [[167, "specifying-problem-specific-data"]], "Specifying spatially-varying data using setaux": [[167, "specifying-spatially-varying-data-using-setaux"]], "Using b4step for work to be done before each time step": [[167, "using-b4step-for-work-to-be-done-before-each-time-step"]], "Using src for source terms": [[167, "using-src-for-source-terms"]], "Using src1d for source terms with AMRClaw": [[167, "using-src1d-for-source-terms-with-amrclaw"]], "Plotting with VisIt": [[168, "plotting-with-visit"]], "Clawpack Virtual Machine": [[169, "clawpack-virtual-machine"]], "Wave-propagation algorithms": [[170, "wave-propagation-algorithms"]], "One space dimension": [[170, "one-space-dimension"]], "Godunov\u2019s method": [[170, "godunov-s-method"]], "High-resolution methods": [[170, "high-resolution-methods"]], "f-wave formulation": [[170, "f-wave-formulation"]], "Capacity functions": [[170, "capacity-functions"]], "Source terms": [[170, "source-terms"]]}, "indexentries": {"clawplotaxes (built-in class)": [[0, "ClawPlotAxes"]], "gethandle()": [[0, "gethandle"], [2, "gethandle"], [3, "gethandle"]], "new_plotitem()": [[0, "new_plotitem"]], "clawplotdata (built-in class)": [[1, "ClawPlotData"]], "clearfigures()": [[1, "clearfigures"]], "clearframes()": [[1, "clearframes"]], "getaxes()": [[1, "getaxes"]], "getfigure()": [[1, "getfigure"]], "getframe()": [[1, "getframe"], [3, "getframe"]], "getitem()": [[1, "getitem"]], "iplotclaw()": [[1, "iplotclaw"]], "new_plotfigure()": [[1, "new_plotfigure"]], "plotframe()": [[1, "plotframe"]], "printframes()": [[1, "printframes"]], "showitems()": [[1, "showitems"]], "clawplotfigure (built-in class)": [[2, "ClawPlotFigure"]], "new_plotaxes()": [[2, "new_plotaxes"]], "clawplotitem (built-in class)": [[3, "ClawPlotItem"]], "csvfault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.CSVFault"]], "dtopography (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.DTopography"]], "dtopography1d (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.DTopography1d"]], "fault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.Fault"]], "fault1d (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.Fault1d"]], "mo() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.Mo"]], "mo() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.Mo"]], "mw() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.Mw"]], "mw() (in module clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.Mw"]], "siftfault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.SiftFault"]], "subfault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.SubFault"]], "subfault1d (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d"]], "subdividedplanefault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.SubdividedPlaneFault"]], "tensorproductfault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.TensorProductFault"]], "ucsbfault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.UCSBFault"]], "calculate_geometry() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.calculate_geometry"]], "calculate_geometry_triangles() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.calculate_geometry_triangles"]], "centers (clawpack.geoclaw.dtopotools.subfault property)": [[32, "clawpack.geoclaw.dtopotools.SubFault.centers"]], "clawpack.geoclaw.dtopotools": [[32, "module-clawpack.geoclaw.dtopotools"]], "containing_rect() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.containing_rect"]], "convert_to_standard_units() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.convert_to_standard_units"]], "coordinate_specification (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.coordinate_specification"]], "coordinate_specification (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.coordinate_specification"]], "corners (clawpack.geoclaw.dtopotools.subfault property)": [[32, "clawpack.geoclaw.dtopotools.SubFault.corners"]], "create_dtopo_xy() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.create_dtopo_xy"]], "create_dtopography() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.create_dtopography"]], "dz_at_t() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.dZ_at_t"]], "dz_at_t() (clawpack.geoclaw.dtopotools.dtopography1d method)": [[32, "clawpack.geoclaw.dtopotools.DTopography1d.dZ_at_t"]], "dz_cellave_at_t() (clawpack.geoclaw.dtopotools.dtopography1d method)": [[32, "clawpack.geoclaw.dtopotools.DTopography1d.dZ_cellave_at_t"]], "dz_max() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.dZ_max"]], "depth (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.depth"]], "dip (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.dip"]], "dynamic_slip() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.dynamic_slip"]], "gauss_pts (clawpack.geoclaw.dtopotools.subfault property)": [[32, "clawpack.geoclaw.dtopotools.SubFault.gauss_pts"]], "latitude (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.latitude"]], "latitude (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.latitude"]], "length (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.length"]], "length (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.length"]], "longitude (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.longitude"]], "longitude (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.longitude"]], "module": [[32, "module-clawpack.geoclaw.dtopotools"], [35, "module-clawpack.geoclaw.fgmax_tools"], [37, "module-clawpack.geoclaw.fgout_tools"], [51, "module-clawpack.geoclaw.util"], [63, "module-clawpack.geoclaw.kmltools"], [92, "module-clawpack.pyclaw.limiters.tvd"], [97, "module-clawpack.pyclaw.fileio.ascii"], [97, "module-clawpack.pyclaw.fileio.binary"], [97, "module-clawpack.pyclaw.fileio.hdf5"], [97, "module-clawpack.pyclaw.fileio.netcdf"], [102, "module-clawpack.riemann.acoustics_1D_py"], [102, "module-clawpack.riemann.advection_1D_py"], [102, "module-clawpack.riemann.burgers_1D_py"], [102, "module-clawpack.riemann.euler_1D_py"], [102, "module-clawpack.riemann.shallow_1D_py"], [109, "module-clawpack.pyclaw.util"], [158, "module-clawpack.geoclaw.surge.storm"], [164, "module-clawpack.geoclaw.topotools"]], "mu (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.mu"]], "okada() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.okada"]], "plot_dz_colors() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.plot_dZ_colors"]], "plot_dz_colors() (in module clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.plot_dZ_colors"]], "plot_dz_contours() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.plot_dZ_contours"]], "plot_dz_contours() (in module clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.plot_dZ_contours"]], "plot_subfaults() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.plot_subfaults"]], "plot_subfaults_depth() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.plot_subfaults_depth"]], "rake (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rake"]], "rake (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.rake"]], "read() (clawpack.geoclaw.dtopotools.csvfault method)": [[32, "clawpack.geoclaw.dtopotools.CSVFault.read"]], "read() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.read"]], "read() (clawpack.geoclaw.dtopotools.dtopography1d method)": [[32, "clawpack.geoclaw.dtopotools.DTopography1d.read"]], "read() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.read"]], "read() (clawpack.geoclaw.dtopotools.ucsbfault method)": [[32, "clawpack.geoclaw.dtopotools.UCSBFault.read"]], "rise_fraction() (in module clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.rise_fraction"]], "rise_shape (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rise_shape"]], "rise_time (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rise_time"]], "rise_time_starting (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rise_time_starting"]], "rupture_time (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rupture_time"]], "rupture_type (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rupture_type"]], "set_corners() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.set_corners"]], "set_dynamic_slip() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.set_dynamic_slip"]], "set_subfaults() (clawpack.geoclaw.dtopotools.siftfault method)": [[32, "clawpack.geoclaw.dtopotools.SiftFault.set_subfaults"]], "slip (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.slip"]], "strike (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.strike"]], "strike (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.strike"]], "strike_direction() (in module clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.strike_direction"]], "subdivide() (clawpack.geoclaw.dtopotools.subdividedplanefault method)": [[32, "clawpack.geoclaw.dtopotools.SubdividedPlaneFault.subdivide"]], "width (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.width"]], "write() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.write"]], "write() (clawpack.geoclaw.dtopotools.dtopography1d method)": [[32, "clawpack.geoclaw.dtopotools.DTopography1d.write"]], "write() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.write"]], "fgmaxgrid (class in clawpack.geoclaw.fgmax_tools)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid"]], "adjust_fgmax_1d() (in module clawpack.geoclaw.fgmax_tools)": [[35, "clawpack.geoclaw.fgmax_tools.adjust_fgmax_1d"]], "bounding_box() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.bounding_box"]], "clawpack.geoclaw.fgmax_tools": [[35, "module-clawpack.geoclaw.fgmax_tools"]], "interp_dz() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.interp_dz"]], "ps4_to_arrays() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.ps4_to_arrays"]], "read_fgmax_grids_data() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.read_fgmax_grids_data"]], "read_output() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.read_output"]], "write_to_fgmax_data() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.write_to_fgmax_data"]], "b (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.B"]], "fgoutframe (class in clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame"]], "fgoutgrid (class in clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid"]], "x (clawpack.geoclaw.fgout_tools.fgoutgrid property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.X"], [37, "clawpack.geoclaw.fgout_tools.FGoutGrid.x"]], "y (clawpack.geoclaw.fgout_tools.fgoutgrid property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.Y"], [37, "clawpack.geoclaw.fgout_tools.FGoutGrid.y"]], "clawpack.geoclaw.fgout_tools": [[37, "module-clawpack.geoclaw.fgout_tools"]], "eta (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.eta"]], "extent_centers (clawpack.geoclaw.fgout_tools.fgoutgrid property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.extent_centers"]], "extent_edges (clawpack.geoclaw.fgout_tools.fgoutgrid property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.extent_edges"]], "get_as_array() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.get_as_array"]], "h (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.h"]], "hss (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.hss"]], "hu (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.hu"]], "hv (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.hv"]], "make_fgout_fcn_xy() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.make_fgout_fcn_xy"]], "make_fgout_fcn_xyt() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.make_fgout_fcn_xyt"]], "print_netcdf_info() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.print_netcdf_info"]], "read_fgout_grids_data() (clawpack.geoclaw.fgout_tools.fgoutgrid method)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.read_fgout_grids_data"]], "read_frame() (clawpack.geoclaw.fgout_tools.fgoutgrid method)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.read_frame"]], "read_netcdf() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.read_netcdf"]], "read_netcdf_arrays() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.read_netcdf_arrays"]], "s (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.s"]], "set_plotdata() (clawpack.geoclaw.fgout_tools.fgoutgrid method)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.set_plotdata"]], "u (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.u"]], "v (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.v"]], "write_netcdf() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.write_netcdf"]], "write_to_fgout_data() (clawpack.geoclaw.fgout_tools.fgoutgrid method)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.write_to_fgout_data"]], "bearing() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.bearing"]], "clawpack.geoclaw.util": [[51, "module-clawpack.geoclaw.util"]], "dist_latlong2meters() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.dist_latlong2meters"]], "dist_meters2latlong() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.dist_meters2latlong"]], "dms2decimal() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.dms2decimal"]], "fetch_noaa_tide_data() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.fetch_noaa_tide_data"]], "gctransect() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.gctransect"]], "haversine() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.haversine"]], "inv_haversine() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.inv_haversine"]], "box2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.box2kml"]], "clawpack.geoclaw.kmltools": [[63, "module-clawpack.geoclaw.kmltools"]], "deg2dms() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.deg2dms"]], "dtopo2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.dtopo2kml"]], "f2s() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.f2s"]], "fgmax2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.fgmax2kml"]], "fgout2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.fgout2kml"]], "gauges2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.gauges2kml"]], "kml_build_colorbar() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.kml_build_colorbar"]], "kml_cb() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.kml_cb"]], "kml_png() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.kml_png"]], "kml_timespan() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.kml_timespan"]], "line2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.line2kml"]], "make_input_data_kmls() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.make_input_data_kmls"]], "pcolorcells_for_kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.pcolorcells_for_kml"]], "png2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.png2kml"]], "poly2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.poly2kml"]], "quad2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.quad2kml"]], "regions2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.regions2kml"]], "topo2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.topo2kml"]], "topo2kmz() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.topo2kmz"]], "transect2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.transect2kml"]], "controller (class in clawpack.pyclaw.controller)": [[91, "clawpack.pyclaw.controller.Controller"]], "f_file_name (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.F_file_name"]], "f_path (clawpack.pyclaw.controller.controller property)": [[91, "clawpack.pyclaw.controller.Controller.F_path"]], "check_validity() (clawpack.pyclaw.controller.controller method)": [[91, "clawpack.pyclaw.controller.Controller.check_validity"]], "compute_f (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.compute_F"]], "compute_p (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.compute_p"]], "file_prefix_p (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.file_prefix_p"]], "frames (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.frames"]], "keep_copy (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.keep_copy"]], "nstepout (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.nstepout"]], "num_output_times (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.num_output_times"]], "out_times (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.out_times"]], "outdir (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.outdir"]], "outdir_p (clawpack.pyclaw.controller.controller property)": [[91, "clawpack.pyclaw.controller.Controller.outdir_p"]], "output_file_prefix (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.output_file_prefix"]], "output_format (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.output_format"]], "output_options (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.output_options"]], "output_style (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.output_style"]], "overwrite (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.overwrite"]], "plot() (clawpack.pyclaw.controller.controller method)": [[91, "clawpack.pyclaw.controller.Controller.plot"]], "plotdata (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.plotdata"]], "run() (clawpack.pyclaw.controller.controller method)": [[91, "clawpack.pyclaw.controller.Controller.run"]], "rundir (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.rundir"]], "runmake (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.runmake"]], "savecode (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.savecode"]], "solver (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.solver"]], "tfinal (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.tfinal"]], "verbosity (clawpack.pyclaw.controller.controller property)": [[91, "clawpack.pyclaw.controller.Controller.verbosity"]], "viewable_attributes (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.viewable_attributes"]], "write_aux_always (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.write_aux_always"]], "write_aux_init (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.write_aux_init"]], "xclawcmd (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.xclawcmd"]], "xclawerr (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.xclawerr"]], "xclawout (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.xclawout"]], "xdir (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.xdir"]], "arora_roe() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.arora_roe"]], "beta_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.beta_limiter"]], "cada_torrilhon_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.cada_torrilhon_limiter"]], "cada_torrilhon_limiter_nonlinear() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.cada_torrilhon_limiter_nonlinear"]], "cfl_superbee() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.cfl_superbee"]], "cfl_superbee_theta() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.cfl_superbee_theta"]], "clawpack.pyclaw.limiters.tvd": [[92, "module-clawpack.pyclaw.limiters.tvd"]], "hyperbee_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.hyperbee_limiter"]], "limit() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.limit"]], "mc_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.mc_limiter"]], "minmod_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.minmod_limiter"]], "superbee_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.superbee_limiter"]], "superpower_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.superpower_limiter"]], "theta_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.theta_limiter"]], "upper_bound_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.upper_bound_limiter"]], "van_leer_klein_sharpening_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.van_leer_klein_sharpening_limiter"]], "dimension (class in clawpack.pyclaw.geometry)": [[94, "clawpack.pyclaw.geometry.Dimension"]], "domain (class in clawpack.petclaw.geometry)": [[94, "clawpack.petclaw.geometry.Domain"]], "domain (class in clawpack.pyclaw.geometry)": [[94, "clawpack.pyclaw.geometry.Domain"]], "grid (class in clawpack.pyclaw.geometry)": [[94, "clawpack.pyclaw.geometry.Grid"]], "patch (class in clawpack.petclaw.geometry)": [[94, "clawpack.petclaw.geometry.Patch"]], "patch (class in clawpack.pyclaw.geometry)": [[94, "clawpack.pyclaw.geometry.Patch"]], "add_dimension() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.add_dimension"]], "add_dimension() (clawpack.pyclaw.geometry.patch method)": [[94, "clawpack.pyclaw.geometry.Patch.add_dimension"]], "add_gauges() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.add_gauges"]], "c_center() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.c_center"]], "c_centers (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.c_centers"]], "c_centers_with_ghost() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.c_centers_with_ghost"]], "c_nodes (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.c_nodes"]], "c_nodes_with_ghost() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.c_nodes_with_ghost"]], "centers (clawpack.pyclaw.geometry.dimension property)": [[94, "clawpack.pyclaw.geometry.Dimension.centers"]], "centers_with_ghost() (clawpack.pyclaw.geometry.dimension method)": [[94, "clawpack.pyclaw.geometry.Dimension.centers_with_ghost"]], "delta (clawpack.pyclaw.geometry.dimension property)": [[94, "clawpack.pyclaw.geometry.Dimension.delta"]], "delta (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.delta"]], "dimensional_split (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.dimensional_split"]], "dimensions (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.dimensions"]], "dimensions (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.dimensions"]], "fwave (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.fwave"]], "gauge_dir_name (clawpack.pyclaw.geometry.grid attribute)": [[94, "clawpack.pyclaw.geometry.Grid.gauge_dir_name"]], "gauge_file_names (clawpack.pyclaw.geometry.grid attribute)": [[94, "clawpack.pyclaw.geometry.Grid.gauge_file_names"]], "gauge_files (clawpack.pyclaw.geometry.grid attribute)": [[94, "clawpack.pyclaw.geometry.Grid.gauge_files"]], "gauges (clawpack.pyclaw.geometry.grid attribute)": [[94, "clawpack.pyclaw.geometry.Grid.gauges"]], "get_dim_attribute() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.get_dim_attribute"]], "get_dim_attribute() (clawpack.pyclaw.geometry.patch method)": [[94, "clawpack.pyclaw.geometry.Patch.get_dim_attribute"]], "grid (clawpack.pyclaw.geometry.domain property)": [[94, "clawpack.pyclaw.geometry.Domain.grid"]], "kernel_language (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.kernel_language"]], "level (clawpack.pyclaw.geometry.patch attribute)": [[94, "clawpack.pyclaw.geometry.Patch.level"]], "lower_global (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.lower_global"]], "mthlim (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.mthlim"]], "name (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.name"]], "nodes (clawpack.pyclaw.geometry.dimension property)": [[94, "clawpack.pyclaw.geometry.Dimension.nodes"]], "nodes_with_ghost() (clawpack.pyclaw.geometry.dimension method)": [[94, "clawpack.pyclaw.geometry.Dimension.nodes_with_ghost"]], "num_cells_global (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.num_cells_global"]], "num_dim (clawpack.pyclaw.geometry.domain property)": [[94, "clawpack.pyclaw.geometry.Domain.num_dim"]], "num_dim (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.num_dim"]], "num_dim (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.num_dim"]], "order (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.order"]], "p_center() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.p_center"]], "p_centers (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.p_centers"]], "p_nodes (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.p_nodes"]], "patch (clawpack.pyclaw.geometry.domain property)": [[94, "clawpack.pyclaw.geometry.Domain.patch"]], "patch_index (clawpack.pyclaw.geometry.patch attribute)": [[94, "clawpack.pyclaw.geometry.Patch.patch_index"]], "plot() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.plot"]], "setup_gauge_files() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.setup_gauge_files"]], "source_split (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.source_split"]], "step_source (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.step_source"]], "transverse_waves (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.transverse_waves"]], "upper_global (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.upper_global"]], "verbosity (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.verbosity"]], "clawpack.pyclaw.fileio.ascii": [[97, "module-clawpack.pyclaw.fileio.ascii"]], "clawpack.pyclaw.fileio.binary": [[97, "module-clawpack.pyclaw.fileio.binary"]], "clawpack.pyclaw.fileio.hdf5": [[97, "module-clawpack.pyclaw.fileio.hdf5"]], "clawpack.pyclaw.fileio.netcdf": [[97, "module-clawpack.pyclaw.fileio.netcdf"]], "read() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.read"]], "read() (in module clawpack.pyclaw.fileio.binary)": [[97, "clawpack.pyclaw.fileio.binary.read"]], "read() (in module clawpack.pyclaw.fileio.hdf5)": [[97, "clawpack.pyclaw.fileio.hdf5.read"]], "read() (in module clawpack.pyclaw.fileio.netcdf)": [[97, "clawpack.pyclaw.fileio.netcdf.read"]], "read_array() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.read_array"]], "read_patch_header() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.read_patch_header"]], "read_t() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.read_t"]], "write() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.write"]], "write() (in module clawpack.pyclaw.fileio.hdf5)": [[97, "clawpack.pyclaw.fileio.hdf5.write"]], "write() (in module clawpack.pyclaw.fileio.netcdf)": [[97, "clawpack.pyclaw.fileio.netcdf.write"]], "write_array() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.write_array"]], "acoustics_1d() (in module clawpack.riemann.acoustics_1d_py)": [[102, "clawpack.riemann.acoustics_1D_py.acoustics_1D"]], "advection_1d() (in module clawpack.riemann.advection_1d_py)": [[102, "clawpack.riemann.advection_1D_py.advection_1D"]], "burgers_1d() (in module clawpack.riemann.burgers_1d_py)": [[102, "clawpack.riemann.burgers_1D_py.burgers_1D"]], "clawpack.riemann.acoustics_1d_py": [[102, "module-clawpack.riemann.acoustics_1D_py"]], "clawpack.riemann.advection_1d_py": [[102, "module-clawpack.riemann.advection_1D_py"]], "clawpack.riemann.burgers_1d_py": [[102, "module-clawpack.riemann.burgers_1D_py"]], "clawpack.riemann.euler_1d_py": [[102, "module-clawpack.riemann.euler_1D_py"]], "clawpack.riemann.shallow_1d_py": [[102, "module-clawpack.riemann.shallow_1D_py"]], "euler_exact_1d() (in module clawpack.riemann.euler_1d_py)": [[102, "clawpack.riemann.euler_1D_py.euler_exact_1D"]], "euler_hll_1d() (in module clawpack.riemann.euler_1d_py)": [[102, "clawpack.riemann.euler_1D_py.euler_hll_1D"]], "euler_hllc_1d() (in module clawpack.riemann.euler_1d_py)": [[102, "clawpack.riemann.euler_1D_py.euler_hllc_1D"]], "euler_roe_1d() (in module clawpack.riemann.euler_1d_py)": [[102, "clawpack.riemann.euler_1D_py.euler_roe_1D"]], "shallow_exact_1d() (in module clawpack.riemann.shallow_1d_py)": [[102, "clawpack.riemann.shallow_1D_py.shallow_exact_1D"]], "shallow_fwave_1d() (in module clawpack.riemann.shallow_1d_py)": [[102, "clawpack.riemann.shallow_1D_py.shallow_fwave_1d"]], "shallow_hll_1d() (in module clawpack.riemann.shallow_1d_py)": [[102, "clawpack.riemann.shallow_1D_py.shallow_hll_1D"]], "shallow_roe_1d() (in module clawpack.riemann.shallow_1d_py)": [[102, "clawpack.riemann.shallow_1D_py.shallow_roe_1D"]], "solution (class in clawpack.pyclaw.solution)": [[103, "clawpack.pyclaw.solution.Solution"]], "is_valid() (clawpack.pyclaw.solution.solution method)": [[103, "clawpack.pyclaw.solution.Solution.is_valid"]], "patch (clawpack.pyclaw.solution.solution property)": [[103, "clawpack.pyclaw.solution.Solution.patch"]], "plot() (clawpack.pyclaw.solution.solution method)": [[103, "clawpack.pyclaw.solution.Solution.plot"]], "read() (clawpack.pyclaw.solution.solution method)": [[103, "clawpack.pyclaw.solution.Solution.read"]], "set_all_states() (clawpack.pyclaw.solution.solution method)": [[103, "clawpack.pyclaw.solution.Solution.set_all_states"]], "start_frame (clawpack.pyclaw.solution.solution property)": [[103, "clawpack.pyclaw.solution.Solution.start_frame"]], "state (clawpack.pyclaw.solution.solution property)": [[103, "clawpack.pyclaw.solution.Solution.state"]], "write() (clawpack.pyclaw.solution.solution method)": [[103, "clawpack.pyclaw.solution.Solution.write"]], "clawsolver (class in clawpack.pyclaw.classic.solver)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver"]], "sharpclawsolver (class in clawpack.pyclaw.sharpclaw.solver)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver"]], "accept_reject_step() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.accept_reject_step"]], "aux_time_dep (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.aux_time_dep"]], "call_before_step_each_stage (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.call_before_step_each_stage"]], "cfl_desired (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.cfl_desired"]], "cfl_max (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.cfl_max"]], "char_decomp (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.char_decomp"]], "check_3rd_ord_cond() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.check_3rd_ord_cond"]], "dq() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.dq"]], "dq_src (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.dq_src"]], "dqdt() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.dqdt"]], "fwave (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.fwave"]], "fwave (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.fwave"]], "get_dt_new() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.get_dt_new"]], "kernel_language (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.kernel_language"]], "kernel_language (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.kernel_language"]], "lim_type (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.lim_type"]], "mthlim (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.mthlim"]], "num_ghost (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.num_ghost"]], "order (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.order"]], "setup() (clawpack.pyclaw.classic.solver.clawsolver method)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.setup"]], "setup() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.setup"]], "source_split (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.source_split"]], "step() (clawpack.pyclaw.classic.solver.clawsolver method)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.step"]], "step() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.step"]], "step_hyperbolic() (clawpack.pyclaw.classic.solver.clawsolver method)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.step_hyperbolic"]], "step_source (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.step_source"]], "tfluct (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.tfluct"]], "tfluct_solver (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.tfluct_solver"]], "time_integrator (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.time_integrator"]], "update_saved_values() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.update_saved_values"]], "verbosity (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.verbosity"]], "weno_order (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.weno_order"]], "f (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.F"]], "f (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.F"]], "state (class in clawpack.petclaw.state)": [[106, "clawpack.petclaw.state.State"]], "state (class in clawpack.pyclaw.state)": [[106, "clawpack.pyclaw.state.State"]], "aux (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.aux"]], "fset (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.fset"]], "gauge_data (clawpack.petclaw.state.state attribute)": [[106, "clawpack.petclaw.state.State.gauge_data"]], "gauge_data (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.gauge_data"]], "get_aux_global() (clawpack.petclaw.state.state method)": [[106, "clawpack.petclaw.state.State.get_aux_global"]], "get_aux_global() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.get_aux_global"]], "get_auxbc_from_aux() (clawpack.petclaw.state.state method)": [[106, "clawpack.petclaw.state.State.get_auxbc_from_aux"]], "get_auxbc_from_aux() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.get_auxbc_from_aux"]], "get_q_global() (clawpack.petclaw.state.state method)": [[106, "clawpack.petclaw.state.State.get_q_global"]], "get_q_global() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.get_q_global"]], "get_qbc_from_q() (clawpack.petclaw.state.state method)": [[106, "clawpack.petclaw.state.State.get_qbc_from_q"]], "get_qbc_from_q() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.get_qbc_from_q"]], "is_valid() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.is_valid"]], "keep_gauges (clawpack.petclaw.state.state attribute)": [[106, "clawpack.petclaw.state.State.keep_gauges"]], "keep_gauges (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.keep_gauges"]], "mf (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.mF"]], "mf (clawpack.pyclaw.state.state property)": [[106, "clawpack.pyclaw.state.State.mF"]], "mp (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.mp"]], "mp (clawpack.pyclaw.state.state property)": [[106, "clawpack.pyclaw.state.State.mp"]], "num_aux (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.num_aux"]], "num_aux (clawpack.pyclaw.state.state property)": [[106, "clawpack.pyclaw.state.State.num_aux"]], "num_eqn (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.num_eqn"]], "num_eqn (clawpack.pyclaw.state.state property)": [[106, "clawpack.pyclaw.state.State.num_eqn"]], "p (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.p"]], "p (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.p"]], "problem_data (clawpack.petclaw.state.state attribute)": [[106, "clawpack.petclaw.state.State.problem_data"]], "problem_data (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.problem_data"]], "q (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.q"]], "set_aux_from_auxbc() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.set_aux_from_auxbc"]], "set_cparam() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.set_cparam"]], "set_num_ghost() (clawpack.petclaw.state.state method)": [[106, "clawpack.petclaw.state.State.set_num_ghost"]], "set_num_ghost() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.set_num_ghost"]], "set_q_from_qbc() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.set_q_from_qbc"]], "t (clawpack.petclaw.state.state attribute)": [[106, "clawpack.petclaw.state.State.t"]], "t (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.t"]], "framecounter (class in clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.FrameCounter"]], "verifyerror": [[109, "clawpack.pyclaw.util.VerifyError"]], "add_parent_doc() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.add_parent_doc"]], "check_diff() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.check_diff"]], "clawpack.pyclaw.util": [[109, "module-clawpack.pyclaw.util"]], "compile_library() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.compile_library"]], "construct_function_handle() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.construct_function_handle"]], "convert_fort_double_to_float() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.convert_fort_double_to_float"]], "gen_variants() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.gen_variants"]], "get_counter() (clawpack.pyclaw.util.framecounter method)": [[109, "clawpack.pyclaw.util.FrameCounter.get_counter"]], "increment() (clawpack.pyclaw.util.framecounter method)": [[109, "clawpack.pyclaw.util.FrameCounter.increment"]], "read_data_line() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.read_data_line"]], "reset_counter() (clawpack.pyclaw.util.framecounter method)": [[109, "clawpack.pyclaw.util.FrameCounter.reset_counter"]], "run_app_from_main() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.run_app_from_main"]], "run_serialized() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.run_serialized"]], "set_counter() (clawpack.pyclaw.util.framecounter method)": [[109, "clawpack.pyclaw.util.FrameCounter.set_counter"]], "test_app() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.test_app"]], "nodataerror": [[158, "clawpack.geoclaw.surge.storm.NoDataError"]], "storm (class in clawpack.geoclaw.surge.storm)": [[158, "clawpack.geoclaw.surge.storm.Storm"]], "available_formats() (in module clawpack.geoclaw.surge.storm)": [[158, "clawpack.geoclaw.surge.storm.available_formats"]], "available_models() (in module clawpack.geoclaw.surge.storm)": [[158, "clawpack.geoclaw.surge.storm.available_models"]], "category() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.category"]], "clawpack.geoclaw.surge.storm": [[158, "module-clawpack.geoclaw.surge.storm"]], "fill_rad_w_other_source() (in module clawpack.geoclaw.surge.storm)": [[158, "clawpack.geoclaw.surge.storm.fill_rad_w_other_source"]], "make_multi_structure() (in module clawpack.geoclaw.surge.storm)": [[158, "clawpack.geoclaw.surge.storm.make_multi_structure"]], "read() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read"]], "read_atcf() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_atcf"]], "read_geoclaw() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_geoclaw"]], "read_hurdat() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_hurdat"]], "read_ibtracs() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_ibtracs"]], "read_imd() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_imd"]], "read_jma() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_jma"]], "read_tcvitals() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_tcvitals"]], "write() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write"]], "write_atcf() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_atcf"]], "write_geoclaw() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_geoclaw"]], "write_hurdat() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_hurdat"]], "write_imd() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_imd"]], "write_jma() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_jma"]], "write_tcvitals() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_tcvitals"]], "topography (class in clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.Topography"]], "x (clawpack.geoclaw.topotools.topography property)": [[164, "clawpack.geoclaw.topotools.Topography.X"], [164, "clawpack.geoclaw.topotools.Topography.x"]], "y (clawpack.geoclaw.topotools.topography property)": [[164, "clawpack.geoclaw.topotools.Topography.Y"], [164, "clawpack.geoclaw.topotools.Topography.y"]], "z (clawpack.geoclaw.topotools.topography property)": [[164, "clawpack.geoclaw.topotools.Topography.Z"], [164, "clawpack.geoclaw.topotools.Topography.z"]], "clawpack.geoclaw.topotools": [[164, "module-clawpack.geoclaw.topotools"]], "create_topo_func() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.create_topo_func"]], "crop() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.crop"]], "delta (clawpack.geoclaw.topotools.topography property)": [[164, "clawpack.geoclaw.topotools.Topography.delta"]], "determine_topo_type() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.determine_topo_type"]], "extent (clawpack.geoclaw.topotools.topography property)": [[164, "clawpack.geoclaw.topotools.Topography.extent"]], "fetch_topo_url() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.fetch_topo_url"]], "generate_2d_coordinates() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.generate_2d_coordinates"]], "generate_2d_topo() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.generate_2d_topo"]], "get_topo() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.get_topo"]], "in_poly() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.in_poly"]], "interp_unstructured() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.interp_unstructured"]], "make_shoreline_xy() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.make_shoreline_xy"]], "plot() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.plot"]], "read() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.read"]], "read_header() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.read_header"]], "read_netcdf() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.read_netcdf"]], "replace_no_data_values() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.replace_no_data_values"]], "replace_values() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.replace_values"]], "set_xyz() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.set_xyZ"]], "smooth_data() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.smooth_data"]], "swapheader() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.swapheader"]], "topo1writer() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.topo1writer"]], "topo2writer() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.topo2writer"]], "topo3writer() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.topo3writer"]], "write() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.write"]]}})
\ No newline at end of file
+Search.setIndex({"docnames": ["ClawPlotAxes", "ClawPlotData", "ClawPlotFigure", "ClawPlotItem", "about", "adjoint", "amr_algorithm", "amrclaw", "amrclaw1d", "amrclaw_doxygen", "amrclaw_flowcharts", "application_documentation", "apps", "aws", "b4run", "b4step_defaults", "bc", "biblio", "bouss1d", "bouss2d", "changes_to_master", "claw43to46", "claw46to50", "claw4x", "clawpack5", "clawpack_components", "community", "contents", "contribute_apps", "current_data", "developers", "docker_image", "dtopotools_module", "f77_vs_f90", "fgmax", "fgmax_tools_module", "fgout", "fgout_tools_module", "first_run", "first_run_fortran", "first_run_pyclaw", "flagregions", "force_dry", "fortran", "fortran_compilers", "fvmbook", "galleries", "gauges", "geoclaw", "geoclaw1d", "geoclaw_started", "geoclaw_util_module", "geohints", "geoplot", "git_versions", "googleearth_plotting", "gpu", "grid_registration", "howto_doc", "howto_release", "installing", "installing_fortcodes", "installing_pip", "kmltools_module", "lagrangian_gauges", "license", "makefiles", "makefiles_library", "manning", "mapc2p", "marching_front", "matlab_plotting", "nearshore_interp", "netcdf", "newapp", "okada", "openmp", "output_styles", "packages", "photos", "plotexamples", "plotting", "plotting_faq", "plotting_geoclaw", "plotting_python", "prereqs", "pyclaw/about", "pyclaw/basics", "pyclaw/classes", "pyclaw/clawpack_and_pyclaw", "pyclaw/cloud", "pyclaw/controller", "pyclaw/evolve/limiters", "pyclaw/examples", "pyclaw/geometry", "pyclaw/going_further", "pyclaw/index", "pyclaw/io", "pyclaw/output", "pyclaw/parallel", "pyclaw/plotting", "pyclaw/problem", "pyclaw/rp", "pyclaw/solution", "pyclaw/solvers", "pyclaw/started", "pyclaw/state", "pyclaw/troubleshooting", "pyclaw/tutorial", "pyclaw/util", "python", "python_path", "qinit_defaults", "quick_surge", "quick_tsunami", "refinement", "regression", "release_5_0_0", "release_5_10_0", "release_5_1_0", "release_5_2_0", "release_5_2_1", "release_5_2_2", "release_5_3_0", "release_5_3_1", "release_5_4_0", "release_5_4_1", "release_5_5_0", "release_5_6_0", "release_5_6_1", "release_5_7_0", "release_5_7_1", "release_5_8_0", "release_5_8_1", "release_5_8_2", "release_5_9_0", "release_5_9_1", "release_5_9_2", "releases", "restart", "riemann", "riemann/Shallow_water_Riemann_solvers", "ruled_rectangles", "sealevel", "set_eta_init", "setaux_defaults", "setenv", "setplot", "setrun", "setrun_amrclaw", "setrun_amrclaw_sample", "setrun_geoclaw", "setrun_sample", "sharing", "sphere_source", "sphinxdoc", "src1d_defaults", "src_defaults", "storm_module", "surgedata", "testing", "timing", "topo", "topotools", "topotools_module", "trouble", "tsunamidata", "user_routines", "visit_plotting", "vm", "wp_algorithms"], "filenames": ["ClawPlotAxes.rst", "ClawPlotData.rst", "ClawPlotFigure.rst", "ClawPlotItem.rst", "about.rst", "adjoint.rst", "amr_algorithm.rst", "amrclaw.rst", "amrclaw1d.rst", "amrclaw_doxygen.rst", "amrclaw_flowcharts.rst", "application_documentation.rst", "apps.rst", "aws.rst", "b4run.rst", "b4step_defaults.rst", "bc.rst", "biblio.rst", "bouss1d.rst", "bouss2d.rst", "changes_to_master.rst", "claw43to46.rst", "claw46to50.rst", "claw4x.rst", "clawpack5.rst", "clawpack_components.rst", "community.rst", "contents.rst", "contribute_apps.rst", "current_data.rst", "developers.rst", "docker_image.rst", "dtopotools_module.rst", "f77_vs_f90.rst", "fgmax.rst", "fgmax_tools_module.rst", "fgout.rst", "fgout_tools_module.rst", "first_run.rst", "first_run_fortran.rst", "first_run_pyclaw.rst", "flagregions.rst", "force_dry.rst", "fortran.rst", "fortran_compilers.rst", "fvmbook.rst", "galleries.rst", "gauges.rst", "geoclaw.rst", "geoclaw1d.rst", "geoclaw_started.rst", "geoclaw_util_module.rst", "geohints.rst", "geoplot.rst", "git_versions.rst", "googleearth_plotting.rst", "gpu.rst", "grid_registration.rst", "howto_doc.rst", "howto_release.rst", "installing.rst", "installing_fortcodes.rst", "installing_pip.rst", "kmltools_module.rst", "lagrangian_gauges.rst", "license.rst", "makefiles.rst", "makefiles_library.rst", "manning.rst", "mapc2p.rst", "marching_front.rst", "matlab_plotting.rst", "nearshore_interp.rst", "netcdf.rst", "newapp.rst", "okada.rst", "openmp.rst", "output_styles.rst", "packages.rst", "photos.rst", "plotexamples.rst", "plotting.rst", "plotting_faq.rst", "plotting_geoclaw.rst", "plotting_python.rst", "prereqs.rst", "pyclaw/about.rst", "pyclaw/basics.rst", "pyclaw/classes.rst", "pyclaw/clawpack_and_pyclaw.rst", "pyclaw/cloud.rst", "pyclaw/controller.rst", "pyclaw/evolve/limiters.rst", "pyclaw/examples.rst", "pyclaw/geometry.rst", "pyclaw/going_further.rst", "pyclaw/index.rst", "pyclaw/io.rst", "pyclaw/output.rst", "pyclaw/parallel.rst", "pyclaw/plotting.rst", "pyclaw/problem.rst", "pyclaw/rp.rst", "pyclaw/solution.rst", "pyclaw/solvers.rst", "pyclaw/started.rst", "pyclaw/state.rst", "pyclaw/troubleshooting.rst", "pyclaw/tutorial.rst", "pyclaw/util.rst", "python.rst", "python_path.rst", "qinit_defaults.rst", "quick_surge.rst", "quick_tsunami.rst", "refinement.rst", "regression.rst", "release_5_0_0.rst", "release_5_10_0.rst", "release_5_1_0.rst", "release_5_2_0.rst", "release_5_2_1.rst", "release_5_2_2.rst", "release_5_3_0.rst", "release_5_3_1.rst", "release_5_4_0.rst", "release_5_4_1.rst", "release_5_5_0.rst", "release_5_6_0.rst", "release_5_6_1.rst", "release_5_7_0.rst", "release_5_7_1.rst", "release_5_8_0.rst", "release_5_8_1.rst", "release_5_8_2.rst", "release_5_9_0.rst", "release_5_9_1.rst", "release_5_9_2.rst", "releases.rst", "restart.rst", "riemann.rst", "riemann/Shallow_water_Riemann_solvers.rst", "ruled_rectangles.rst", "sealevel.rst", "set_eta_init.rst", "setaux_defaults.rst", "setenv.rst", "setplot.rst", "setrun.rst", "setrun_amrclaw.rst", "setrun_amrclaw_sample.rst", "setrun_geoclaw.rst", "setrun_sample.rst", "sharing.rst", "sphere_source.rst", "sphinxdoc.rst", "src1d_defaults.rst", "src_defaults.rst", "storm_module.rst", "surgedata.rst", "testing.rst", "timing.rst", "topo.rst", "topotools.rst", "topotools_module.rst", "trouble.rst", "tsunamidata.rst", "user_routines.rst", "visit_plotting.rst", "vm.rst", "wp_algorithms.rst"], "titles": ["ClawPlotAxes", "ClawPlotData", "ClawPlotFigure", "ClawPlotItem", "About this software", "Guiding AMR with adjoint flagging", "Adaptive mesh refinement (AMR) algorithms", "AMRClaw Description and Detailed Contents", "AMRClaw for 1d problems", "Doxygen documentation of AMRClaw", "AMRClaw Flowcharts", "Application documentation", "Clawpack Applications repository", "Amazon Web Services EC2 Clawpack AMI", "b4run function", "b4step default routines", "Boundary conditions", "Bibliography", "Boussinesq solvers in One Space Dimension", "Boussinesq solvers in Two Space Dimensions", "Changes to master since v5.10.0", "Converting from Clawpack 4.3 to 4.6", "Converting from Clawpack 4.6 to 5.0", "Clawpack 4.x links", "Changes in Clawpack 5.0", "Clawpack components", "Clawpack Community", "Full Table of Contents", "Contributing examples and applications", "current_data", "Developers\u2019 Guide", "Docker for Clawpack", "dtopotools module for moving topography", "Fortran 77 vs. Fortran 90 files", "Fixed grid monitoring (fgmax)", "fgmax_tools module for working with fgmax grids", "Fixed grid output (fgout)", "fgout_tools module for working with fgout grids", "Running an example", "Testing your Fortran installation and running an example", "Testing a PyClaw installation and running an example", "Specifying flagregions for adaptive refinement", "Force Cells to be Dry Initially", "Fortran version", "Fortran Compilers", "Examples from the book FVMHP", "Clawpack Gallery", "Gauges", "GeoClaw Description and Detailed Contents", "GeoClaw in One Space Dimension", "Getting started with GeoClaw", "geoclaw.util module of utility functions", "Cautionary Hints on using GeoClaw", "GeoClaw plotting tools", "Keeping track of repository versions with Git", "Visualizing GeoClaw results in Google Earth", "Using the GPU version of Clawpack", "Grid registration", "Guide for updating this documentation", "Guide for doing a Clawpack release", "Installing Clawpack", "Options for installing Clawpack Fortran codes", "pip install instructions", "kmltools module of utility functions", "Lagrangian gauges for particle tracking", "License", "Clawpack Makefiles", "Library routines in Makefiles", "Manning friction term", "The mapc2p function", "Marching Front algorithm", "Plotting using Matlab", "Nearshore interpolation", "Using NetCDF output", "Creating a new application directory", "Earthquake sources: Fault slip and the Okada model", "Using OpenMP", "Output data sytles and formats", "Which Clawpack solver should I use?", "Clawpack Community Photos", "Plotting examples", "Plotting with Visclaw", "Plotting hints and FAQ", "Plotting routines for GeoClaw", "Plotting options in Python", "Installation Prerequisites", "About PyClaw", "PyClaw Basics", "Understanding Pyclaw Classes", "Porting a problem from Clawpack 4.6.x to PyClaw", "Running PyClaw in the cloud", "Pyclaw Controller Class", "Pyclaw Limiters", "Working with PyClaw\u2019s built-in examples", "PyClaw Geometry", "Going Further", "PyClaw", "Pyclaw Input/Output Package", "PyClaw output", "Running in parallel", "Plotting PyClaw results", "Setting up your own problem", "Riemann Solver Package", "PyClaw Solutions", "Using PyClaw\u2019s solvers: Classic and SharpClaw", "Installing PyClaw", "PyClaw State", "Troubleshooting", "PyClaw tutorial: Solve the acoustics equations", "Pyclaw Utility Module", "Python Hints", "Python path", "qinit default routines", "Quick start guide for storm surge modeling", "Quick start guide for tsunami modeling", "AMR refinement criteria", "Regression testing", "v5.0.0 release notes", "v5.10.0 release notes", "v5.1.0 release notes", "v5.2.0 release notes", "v5.2.1 release notes", "v5.2.2 release notes", "v5.3.0 release notes", "v5.3.1 release notes", "v5.4.0 release notes", "v5.4.1 release notes", "v5.5.0 release notes", "v5.6.0 release notes", "v5.6.1 release notes", "v5.7.0 release notes", "v5.7.1 release notes", "v5.8.0 release notes", "v5.8.1 release notes", "v5.8.2 release notes", "v5.9.0 release notes", "v5.9.1 release notes", "v5.9.2 release notes", "Releases of Clawpack and release notes", "Checkpointing and restarting", "Riemann solvers", "Shallow water Riemann solvers in Clawpack", "Ruled Rectangles", "Setting sea_level", "Set Eta Init \u2013 spatially varying initial surface elevation", "setaux default routines", "Set environment variables", "Using setplot.py to specify the desired plots", "Specifying classic run-time parameters in setrun.py", "Specifying AMRClaw run-time parameters in setrun.py", "Sample setrun.py module for AMRClaw", "Specifying GeoClaw parameters in setrun.py", "Sample setrun.py module for classic Clawpack", "Saving and sharing results", "Source terms for shallow water on the sphere", "Compiling the Sphinx documentation locally", "src1d default routines", "src default routines", "Storm Specification Class and Tools", "Sources for Storm Surge Data", "Testing your installation", "Timing Statistics", "Topography data", "Python tools for working with topo and dtopo", "topotools module for working with topography data", "Troubleshooting", "Some sources of tsunami data", "User files required for the Fortran code", "Plotting with VisIt", "Clawpack Virtual Machine", "Wave-propagation algorithms"], "terms": {"For": [0, 1, 2, 3, 5, 7, 8, 9, 10, 12, 13, 16, 17, 18, 19, 21, 24, 26, 27, 28, 29, 30, 31, 32, 34, 36, 38, 40, 41, 42, 44, 45, 47, 49, 51, 52, 53, 55, 57, 58, 59, 66, 67, 70, 71, 72, 75, 76, 77, 81, 82, 84, 85, 88, 89, 93, 94, 96, 97, 98, 99, 101, 104, 105, 109, 110, 111, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 138, 140, 141, 142, 143, 144, 147, 148, 149, 150, 151, 152, 155, 158, 159, 161, 162, 164, 166, 167, 170], "usag": [0, 1, 2, 3, 13, 19, 48, 49, 51, 55, 60, 97, 127, 158, 164], "see": [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 12, 13, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 30, 31, 32, 34, 36, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 55, 56, 57, 58, 59, 60, 61, 62, 64, 65, 66, 67, 68, 70, 71, 72, 74, 75, 76, 77, 80, 81, 82, 83, 84, 85, 86, 89, 91, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 146, 147, 148, 149, 150, 151, 153, 155, 156, 157, 158, 160, 161, 162, 164, 165, 166, 167, 168, 169, 170], "us": [0, 1, 2, 3, 4, 6, 7, 8, 9, 10, 11, 12, 14, 16, 17, 21, 22, 23, 24, 25, 26, 28, 29, 30, 32, 34, 35, 37, 38, 39, 40, 42, 43, 44, 45, 47, 48, 49, 50, 51, 53, 54, 55, 57, 58, 59, 60, 61, 63, 65, 66, 68, 70, 72, 74, 75, 77, 80, 81, 82, 83, 84, 85, 86, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 99, 100, 102, 103, 105, 106, 108, 109, 110, 111, 112, 113, 115, 116, 118, 120, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 135, 136, 137, 138, 139, 142, 143, 146, 148, 149, 150, 151, 152, 154, 156, 157, 158, 161, 162, 164, 166, 168, 169, 170], "setplot": [0, 1, 2, 3, 7, 21, 22, 24, 27, 45, 47, 48, 49, 80, 81, 100, 101, 109, 118, 125, 135, 136, 165, 168], "py": [0, 1, 2, 3, 5, 6, 7, 8, 11, 13, 14, 16, 21, 22, 27, 30, 32, 34, 35, 37, 38, 39, 40, 41, 42, 43, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 58, 59, 63, 64, 66, 68, 70, 75, 77, 78, 80, 81, 83, 84, 89, 93, 96, 99, 100, 101, 105, 113, 115, 116, 118, 119, 120, 121, 122, 123, 124, 125, 127, 128, 129, 130, 131, 132, 135, 136, 137, 139, 140, 141, 143, 144, 146, 154, 158, 162, 164, 165, 167, 168], "specifi": [0, 1, 2, 3, 4, 5, 6, 7, 15, 16, 18, 19, 22, 24, 27, 29, 30, 31, 32, 34, 35, 36, 37, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 54, 55, 57, 63, 66, 67, 68, 70, 71, 72, 75, 76, 77, 78, 80, 81, 83, 88, 91, 94, 97, 98, 101, 103, 104, 107, 109, 111, 112, 113, 116, 119, 122, 123, 124, 125, 126, 127, 130, 132, 135, 136, 137, 139, 140, 142, 143, 144, 145, 150, 152, 153, 156, 157, 158, 159, 161, 162, 164, 165, 166, 168, 170], "desir": [0, 1, 2, 3, 6, 7, 16, 19, 24, 27, 28, 32, 34, 35, 36, 37, 42, 45, 47, 49, 59, 62, 63, 64, 70, 72, 75, 77, 80, 81, 82, 84, 88, 89, 91, 98, 103, 104, 112, 125, 127, 130, 144, 146, 148, 149, 150, 151, 152, 158, 162, 164, 165], "exampl": [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 13, 14, 16, 18, 22, 24, 26, 29, 30, 31, 32, 37, 41, 43, 44, 46, 48, 49, 51, 57, 58, 59, 60, 61, 63, 64, 66, 67, 68, 72, 75, 76, 77, 81, 82, 84, 86, 87, 88, 89, 91, 94, 95, 97, 98, 101, 102, 103, 104, 105, 108, 109, 110, 111, 113, 114, 115, 116, 118, 119, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 135, 136, 137, 139, 140, 141, 143, 144, 146, 147, 148, 149, 150, 151, 152, 153, 154, 158, 160, 161, 162, 164, 165, 166, 167], "object": [0, 1, 2, 3, 5, 18, 24, 29, 32, 34, 36, 37, 41, 47, 55, 63, 70, 75, 81, 82, 84, 88, 89, 91, 97, 98, 99, 101, 103, 106, 107, 108, 109, 119, 128, 136, 137, 139, 140, 148, 149, 150, 151, 152, 158, 164], "thi": [0, 1, 2, 3, 5, 6, 8, 10, 11, 12, 13, 14, 16, 17, 18, 19, 20, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 54, 55, 56, 57, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 70, 71, 72, 73, 75, 76, 77, 81, 82, 84, 85, 86, 88, 89, 91, 92, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 113, 114, 115, 116, 118, 119, 120, 122, 123, 124, 125, 126, 127, 128, 129, 130, 132, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 158, 159, 160, 161, 162, 164, 165, 166, 167, 168, 169, 170], "class": [0, 1, 2, 3, 5, 27, 32, 34, 35, 36, 37, 41, 55, 63, 75, 82, 84, 89, 94, 96, 101, 103, 104, 106, 108, 109, 110, 128, 130, 139, 142, 147, 148, 149, 150, 151, 152, 164], "ar": [0, 1, 2, 3, 4, 5, 6, 7, 9, 10, 12, 13, 15, 16, 18, 19, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 52, 53, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 70, 71, 75, 76, 77, 78, 81, 83, 84, 85, 86, 88, 89, 91, 92, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 119, 120, 121, 122, 123, 124, 125, 126, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 147, 148, 149, 150, 151, 152, 154, 155, 156, 157, 158, 159, 160, 161, 162, 164, 165, 167, 170], "usual": [0, 2, 3, 5, 6, 19, 32, 36, 42, 47, 50, 55, 63, 66, 75, 77, 93, 94, 99, 101, 102, 104, 109, 113, 115, 125, 140, 148, 149, 150, 151, 152, 165, 167], "creat": [0, 1, 2, 3, 5, 6, 7, 21, 26, 27, 30, 32, 34, 35, 36, 37, 38, 39, 41, 43, 45, 47, 48, 49, 50, 54, 56, 58, 62, 63, 66, 75, 77, 81, 82, 84, 89, 90, 93, 94, 96, 97, 100, 103, 106, 107, 108, 109, 115, 116, 118, 119, 123, 124, 125, 127, 128, 129, 132, 135, 142, 147, 148, 149, 150, 153, 155, 158, 164, 166, 167, 168], "new_plotax": [0, 2, 47, 55, 82, 147], "clawplotfigur": [0, 1, 55, 82, 136, 147], "The": [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 20, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 32, 34, 36, 37, 38, 39, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 56, 57, 58, 59, 61, 62, 63, 64, 65, 66, 67, 68, 72, 74, 75, 76, 77, 78, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 91, 92, 94, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 109, 110, 111, 113, 115, 116, 118, 119, 120, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 160, 161, 162, 164, 165, 166, 167, 168, 169, 170], "follow": [0, 2, 3, 4, 5, 6, 13, 16, 18, 19, 20, 21, 25, 26, 30, 32, 34, 38, 39, 40, 42, 47, 50, 55, 57, 58, 59, 60, 62, 65, 70, 71, 75, 77, 82, 83, 85, 86, 88, 89, 90, 93, 94, 97, 98, 99, 101, 102, 103, 105, 106, 108, 109, 111, 116, 118, 127, 132, 135, 136, 137, 139, 140, 142, 146, 147, 148, 149, 151, 158, 160, 161, 162, 165, 167, 169], "can": [0, 2, 3, 4, 5, 6, 7, 8, 9, 11, 12, 13, 14, 15, 16, 18, 19, 21, 22, 24, 26, 28, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 66, 67, 68, 70, 71, 72, 74, 75, 76, 77, 78, 80, 81, 82, 83, 84, 86, 88, 89, 90, 92, 93, 94, 96, 97, 98, 99, 100, 101, 103, 104, 105, 106, 107, 108, 109, 111, 112, 113, 115, 116, 118, 119, 120, 123, 124, 125, 126, 127, 130, 131, 132, 135, 137, 138, 139, 140, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 156, 157, 158, 160, 162, 164, 165, 166, 167, 168, 170], "set": [0, 1, 2, 3, 5, 6, 8, 13, 14, 15, 16, 18, 19, 24, 27, 29, 30, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 51, 52, 53, 54, 55, 58, 59, 61, 62, 63, 64, 66, 67, 70, 72, 74, 75, 76, 77, 78, 80, 81, 88, 89, 91, 93, 94, 95, 96, 97, 98, 99, 102, 103, 104, 105, 106, 107, 108, 109, 111, 112, 115, 116, 118, 119, 120, 123, 124, 125, 127, 129, 130, 132, 135, 136, 137, 139, 140, 141, 142, 145, 147, 148, 149, 150, 151, 152, 153, 154, 158, 159, 162, 164, 166, 167, 170], "user": [0, 2, 3, 4, 5, 6, 12, 13, 21, 22, 24, 25, 27, 28, 29, 30, 31, 34, 36, 37, 44, 49, 52, 55, 60, 62, 63, 68, 71, 75, 77, 82, 89, 90, 93, 97, 99, 107, 109, 110, 111, 115, 123, 125, 127, 129, 136, 137, 140, 148, 150, 151, 152, 155, 164, 170], "name": [0, 1, 2, 3, 5, 7, 11, 12, 13, 18, 19, 22, 24, 30, 31, 32, 35, 36, 37, 38, 39, 41, 42, 43, 47, 49, 55, 58, 59, 63, 65, 71, 82, 84, 86, 89, 91, 93, 94, 97, 98, 102, 103, 108, 109, 111, 118, 124, 127, 132, 139, 140, 142, 147, 148, 149, 150, 151, 152, 158, 164, 167, 168], "str": [0, 1, 3, 32, 63, 97, 148, 149, 158, 164], "axescmd": [0, 84], "command": [0, 1, 2, 3, 11, 13, 14, 19, 30, 43, 54, 55, 56, 59, 61, 62, 66, 74, 81, 82, 85, 88, 89, 91, 96, 99, 100, 104, 108, 109, 110, 111, 116, 136, 140, 146, 147, 148, 149, 162, 164], "ax": [0, 1, 2, 29, 32, 47, 55, 63, 71, 81, 82, 84, 147, 164], "subplot": [0, 32, 70, 84, 142], "1": [0, 2, 3, 4, 5, 6, 7, 8, 9, 13, 14, 15, 16, 17, 18, 19, 24, 32, 34, 35, 36, 38, 39, 40, 41, 47, 48, 49, 51, 52, 53, 55, 57, 58, 59, 62, 63, 64, 66, 71, 75, 77, 82, 84, 88, 89, 91, 92, 93, 94, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 115, 120, 122, 123, 125, 127, 128, 130, 132, 134, 138, 139, 140, 141, 142, 143, 145, 147, 148, 149, 150, 151, 152, 154, 158, 161, 162, 164, 165, 166, 167, 170], "singl": [0, 1, 2, 3, 5, 6, 16, 21, 24, 25, 29, 30, 32, 34, 36, 37, 42, 47, 49, 50, 55, 57, 58, 59, 63, 64, 66, 71, 75, 76, 77, 78, 88, 94, 97, 98, 103, 109, 116, 122, 123, 125, 138, 140, 144, 148, 149, 150, 151, 162, 164, 166, 167], "fill": [0, 3, 4, 6, 16, 26, 55, 70, 94, 97, 106, 113, 125, 144, 148, 158, 161, 164, 167], "figur": [0, 1, 2, 4, 13, 32, 38, 39, 42, 45, 47, 57, 63, 70, 71, 81, 84, 103, 111, 118, 135, 140, 142, 147, 164], "2": [0, 3, 4, 6, 7, 15, 16, 17, 18, 19, 24, 32, 34, 35, 36, 37, 41, 42, 47, 49, 51, 55, 57, 63, 64, 68, 70, 71, 72, 75, 76, 77, 82, 84, 85, 88, 89, 91, 92, 94, 97, 98, 99, 101, 102, 103, 104, 105, 106, 108, 109, 111, 115, 116, 118, 119, 123, 124, 125, 127, 128, 129, 130, 132, 135, 136, 138, 139, 140, 142, 145, 148, 149, 150, 151, 152, 154, 158, 161, 162, 164, 167, 170], "top": [0, 1, 3, 11, 25, 31, 32, 36, 55, 58, 59, 61, 62, 75, 82, 96, 101, 102, 111, 116, 139, 146], "half": [0, 16, 17, 75, 77, 104, 135, 148, 167], "0": [0, 2, 3, 4, 5, 6, 16, 18, 19, 21, 27, 29, 30, 32, 34, 36, 37, 41, 42, 47, 48, 49, 51, 52, 55, 56, 57, 58, 59, 61, 62, 63, 64, 66, 67, 68, 70, 71, 72, 75, 77, 82, 84, 85, 88, 89, 91, 92, 94, 97, 98, 99, 101, 102, 103, 104, 105, 106, 108, 109, 110, 111, 115, 121, 122, 124, 126, 129, 131, 133, 134, 136, 137, 138, 139, 141, 142, 143, 144, 148, 149, 150, 151, 152, 154, 161, 162, 164, 166, 167, 169, 170], "8": [0, 34, 36, 42, 47, 55, 58, 63, 70, 77, 82, 94, 107, 109, 117, 118, 129, 135, 138, 140, 142, 147, 148, 149, 151, 152], "tall": 0, "skinni": 0, "axi": [0, 32, 42, 49, 53, 55, 70, 71, 82, 94, 136, 142], "matplotlib": [0, 2, 3, 13, 32, 42, 53, 55, 70, 81, 82, 85, 87, 90, 110, 131, 141, 147, 164, 165], "document": [0, 1, 2, 3, 6, 7, 19, 20, 23, 24, 25, 26, 27, 30, 31, 34, 48, 52, 57, 62, 65, 75, 81, 82, 83, 84, 86, 92, 94, 97, 98, 99, 100, 104, 106, 109, 111, 118, 120, 133, 134, 135, 136, 137, 138, 147, 150, 154, 168, 169], "show": [0, 2, 3, 9, 10, 12, 14, 30, 32, 38, 39, 42, 46, 47, 55, 58, 59, 63, 66, 70, 71, 84, 94, 104, 108, 111, 116, 118, 123, 133, 134, 135, 142, 164, 165, 167], "bool": [0, 1, 2, 3, 51, 63, 91, 97, 102, 103, 104, 106, 109, 151, 158, 164], "If": [0, 1, 2, 3, 4, 5, 6, 12, 13, 15, 16, 18, 19, 20, 21, 22, 24, 25, 26, 27, 29, 30, 31, 32, 34, 36, 37, 38, 39, 40, 42, 43, 44, 47, 49, 51, 55, 57, 58, 59, 60, 61, 62, 63, 64, 66, 67, 68, 70, 71, 72, 75, 76, 77, 78, 80, 81, 82, 84, 85, 86, 88, 93, 94, 96, 97, 98, 99, 101, 103, 104, 105, 106, 107, 109, 111, 113, 114, 115, 116, 118, 125, 126, 127, 128, 129, 130, 132, 135, 136, 137, 139, 140, 141, 142, 143, 144, 145, 146, 148, 149, 150, 151, 152, 156, 157, 158, 160, 162, 164, 165, 167, 170], "fals": [0, 1, 2, 3, 5, 32, 37, 42, 52, 53, 54, 55, 63, 70, 77, 91, 94, 97, 102, 103, 104, 106, 109, 124, 125, 130, 135, 139, 141, 148, 149, 150, 151, 152, 158, 164], "suppress": [0, 2, 3, 30, 55, 63, 124, 126, 148, 149], "all": [0, 1, 4, 6, 11, 12, 13, 16, 19, 22, 24, 25, 27, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 42, 43, 44, 47, 48, 51, 52, 54, 55, 57, 58, 59, 60, 61, 63, 64, 65, 66, 67, 71, 72, 74, 75, 76, 77, 78, 81, 82, 84, 85, 86, 88, 91, 92, 94, 96, 97, 98, 99, 101, 102, 103, 104, 106, 109, 110, 111, 114, 115, 116, 118, 119, 120, 123, 124, 125, 127, 130, 132, 138, 139, 140, 141, 142, 144, 147, 148, 149, 150, 151, 152, 153, 159, 160, 161, 162, 164, 165, 167], "item": [0, 1, 3, 71, 81, 84, 109, 132, 137, 147], "titl": [0, 1, 4, 17, 26, 42, 47, 55, 63, 70, 81, 96, 125, 136, 142, 164], "appear": [0, 1, 3, 5, 8, 13, 20, 25, 30, 34, 36, 47, 48, 49, 55, 58, 63, 66, 69, 82, 98, 103, 106, 118, 125, 132, 135, 136, 137, 151, 153, 162], "default": [0, 1, 2, 3, 13, 18, 19, 24, 30, 32, 34, 36, 37, 44, 47, 48, 51, 53, 54, 55, 57, 62, 63, 64, 66, 67, 71, 72, 75, 76, 77, 82, 84, 88, 91, 93, 94, 97, 98, 99, 100, 103, 104, 106, 107, 109, 115, 118, 119, 125, 129, 130, 132, 135, 136, 137, 139, 143, 149, 150, 151, 154, 158, 162, 164, 167], "string": [0, 1, 3, 7, 32, 34, 37, 47, 49, 51, 55, 57, 63, 64, 82, 89, 91, 92, 94, 97, 98, 103, 109, 111, 118, 136, 148, 151, 158, 164], "new": [0, 1, 2, 4, 5, 6, 8, 12, 13, 19, 20, 22, 24, 26, 27, 30, 31, 32, 34, 35, 36, 37, 41, 42, 43, 44, 47, 48, 51, 55, 56, 57, 59, 62, 63, 64, 66, 67, 68, 70, 71, 76, 77, 82, 84, 87, 88, 89, 90, 91, 97, 99, 101, 104, 106, 113, 115, 118, 119, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 135, 136, 137, 139, 140, 142, 143, 144, 146, 148, 149, 151, 158, 162, 164, 167], "v5": [0, 5, 14, 30, 31, 34, 36, 41, 45, 47, 56, 58, 59, 61, 62, 67, 77, 103, 110, 111, 115, 138, 139, 143, 144, 149, 151, 154], "9": [0, 34, 36, 37, 42, 47, 55, 63, 64, 77, 82, 94, 97, 103, 118, 125, 138, 139, 142, 148, 151, 152, 154], "note": [0, 1, 3, 4, 5, 13, 15, 16, 19, 22, 24, 26, 27, 30, 32, 34, 35, 36, 37, 41, 42, 43, 44, 47, 49, 51, 55, 56, 57, 58, 59, 60, 61, 62, 63, 66, 67, 70, 75, 76, 82, 84, 89, 92, 93, 94, 96, 97, 99, 101, 102, 105, 106, 109, 110, 112, 115, 139, 140, 142, 143, 144, 145, 147, 148, 149, 150, 151, 152, 156, 157, 158, 159, 161, 162, 164, 166, 167], "now": [0, 5, 6, 7, 13, 20, 22, 24, 26, 28, 30, 31, 32, 34, 35, 36, 37, 41, 42, 44, 54, 57, 58, 59, 68, 70, 72, 75, 77, 82, 88, 89, 94, 96, 97, 98, 99, 100, 101, 103, 104, 105, 108, 113, 115, 116, 118, 119, 120, 123, 124, 125, 126, 127, 129, 130, 132, 133, 135, 136, 137, 143, 147, 149, 153, 162, 169], "includ": [0, 2, 4, 6, 13, 18, 19, 20, 23, 24, 25, 29, 30, 31, 32, 34, 36, 37, 38, 39, 41, 43, 44, 46, 47, 49, 52, 55, 57, 59, 61, 62, 63, 65, 67, 68, 70, 71, 72, 75, 76, 78, 81, 82, 84, 86, 88, 89, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 108, 111, 113, 115, 116, 118, 119, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 140, 141, 142, 146, 148, 150, 151, 153, 154, 155, 158, 159, 161, 162, 164, 167], "h": [0, 16, 17, 18, 19, 34, 36, 37, 42, 47, 48, 49, 52, 55, 56, 63, 68, 72, 102, 115, 123, 130, 136, 141, 143, 144, 151, 162], "m": [0, 4, 17, 18, 22, 24, 30, 32, 47, 48, 51, 55, 56, 58, 59, 63, 70, 71, 75, 77, 89, 115, 122, 136, 140, 142, 151, 164, 167, 170], "": [0, 1, 3, 4, 6, 13, 17, 22, 27, 30, 31, 32, 34, 36, 37, 38, 40, 41, 42, 47, 51, 55, 56, 58, 59, 62, 63, 64, 66, 70, 75, 76, 78, 81, 84, 87, 89, 91, 92, 94, 95, 96, 97, 99, 100, 101, 102, 103, 106, 108, 110, 113, 115, 116, 124, 136, 140, 142, 147, 148, 149, 151, 158, 161, 164, 165, 166, 167], "d": [0, 4, 7, 17, 30, 32, 51, 55, 58, 63, 93, 102, 111, 116, 118, 136, 140], "describ": [0, 3, 4, 5, 6, 7, 13, 14, 16, 18, 19, 21, 28, 30, 32, 33, 34, 36, 38, 39, 41, 42, 47, 49, 50, 51, 52, 55, 56, 58, 59, 61, 63, 64, 66, 67, 70, 71, 75, 77, 78, 81, 82, 83, 94, 96, 97, 103, 109, 113, 115, 116, 118, 125, 128, 129, 135, 140, 142, 143, 147, 148, 149, 151, 158, 159, 162, 164, 166, 167, 170], "further": [0, 6, 16, 19, 27, 34, 36, 44, 52, 63, 66, 71, 96, 110, 115, 116, 135, 136, 149], "below": [0, 3, 6, 13, 15, 16, 18, 19, 20, 24, 26, 30, 31, 32, 34, 36, 42, 47, 48, 49, 55, 56, 58, 59, 62, 63, 68, 71, 75, 84, 86, 88, 90, 98, 102, 108, 111, 112, 115, 116, 118, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 140, 142, 145, 146, 147, 148, 149, 150, 151, 152, 156, 157, 158, 162, 164, 167], "case": [0, 5, 6, 8, 13, 16, 19, 21, 24, 32, 34, 36, 41, 44, 47, 48, 49, 52, 55, 62, 63, 67, 70, 71, 72, 75, 77, 82, 88, 94, 97, 99, 101, 103, 109, 111, 115, 116, 118, 120, 123, 124, 125, 126, 127, 132, 135, 136, 139, 142, 143, 149, 151, 158, 162, 164, 165, 167, 170], "title_with_t": [0, 82], "true": [0, 1, 2, 3, 5, 6, 15, 16, 29, 32, 35, 37, 42, 47, 51, 54, 55, 58, 63, 70, 77, 81, 88, 91, 94, 97, 98, 99, 103, 104, 106, 115, 118, 125, 136, 139, 140, 142, 144, 145, 148, 149, 150, 151, 152, 158, 164], "title_fonts": [0, 136], "float": [0, 3, 32, 34, 37, 47, 51, 63, 91, 94, 97, 102, 106, 109, 148, 149, 151, 152, 158, 164], "fontsiz": [0, 82], "title_kwarg": [0, 136], "ani": [0, 3, 4, 5, 6, 8, 13, 16, 18, 19, 20, 21, 22, 24, 29, 30, 31, 34, 36, 37, 38, 39, 40, 47, 48, 49, 52, 54, 55, 58, 59, 61, 62, 64, 65, 66, 68, 70, 71, 72, 74, 76, 77, 78, 82, 86, 92, 93, 94, 96, 97, 98, 99, 101, 103, 105, 109, 111, 114, 115, 116, 118, 123, 127, 129, 135, 136, 137, 139, 142, 143, 144, 147, 148, 149, 151, 158, 167, 170], "other": [0, 3, 4, 5, 6, 7, 9, 12, 13, 16, 19, 22, 24, 29, 30, 32, 35, 36, 37, 38, 39, 41, 47, 48, 49, 50, 52, 55, 56, 57, 59, 60, 61, 62, 65, 66, 68, 70, 71, 72, 75, 76, 77, 81, 84, 86, 88, 89, 91, 94, 96, 97, 98, 100, 101, 102, 105, 108, 110, 111, 115, 116, 119, 120, 122, 123, 125, 140, 143, 146, 147, 148, 151, 153, 158, 162, 164, 166, 167, 168], "kwarg": [0, 2, 3, 32, 63, 82, 109, 116, 118, 136, 147, 158], "pass": [0, 3, 16, 21, 22, 30, 32, 37, 47, 49, 55, 63, 76, 82, 88, 91, 93, 95, 101, 104, 106, 107, 109, 116, 135, 140, 150, 158, 164, 167], "plt": [0, 63, 141], "e": [0, 1, 3, 5, 8, 12, 13, 14, 16, 22, 24, 29, 30, 31, 32, 34, 36, 37, 44, 47, 49, 50, 51, 54, 55, 57, 58, 59, 60, 61, 62, 63, 64, 66, 67, 68, 70, 71, 74, 75, 76, 77, 78, 81, 84, 85, 89, 94, 96, 97, 99, 100, 101, 102, 103, 104, 107, 109, 110, 111, 115, 116, 118, 123, 124, 125, 126, 127, 135, 136, 137, 140, 142, 143, 144, 146, 147, 148, 149, 150, 151, 152, 158, 162, 164, 165, 166, 167, 170], "g": [0, 1, 3, 4, 5, 8, 12, 13, 14, 16, 17, 22, 24, 29, 30, 31, 32, 34, 36, 37, 44, 47, 49, 50, 54, 55, 58, 59, 60, 61, 62, 63, 64, 66, 68, 70, 71, 74, 75, 76, 77, 78, 81, 84, 85, 96, 99, 100, 101, 102, 103, 104, 110, 111, 115, 116, 118, 123, 124, 125, 126, 127, 135, 136, 137, 140, 142, 143, 146, 147, 148, 149, 150, 151, 152, 162, 164, 165, 167, 170], "color": [0, 2, 3, 32, 42, 55, 63, 70, 71, 81, 136, 142, 147, 164], "format": [0, 1, 3, 5, 13, 14, 27, 32, 35, 38, 39, 42, 47, 48, 50, 52, 53, 55, 57, 63, 64, 66, 70, 71, 73, 75, 81, 82, 88, 91, 97, 98, 100, 101, 103, 109, 113, 124, 125, 127, 130, 132, 135, 136, 148, 151, 158, 159, 164, 166, 168], "like": [0, 12, 13, 18, 26, 30, 31, 42, 44, 55, 58, 59, 63, 64, 71, 84, 89, 91, 94, 97, 98, 99, 102, 103, 104, 106, 110, 111, 116, 124, 140, 142, 147, 161, 162, 165], "time": [0, 1, 5, 6, 7, 10, 14, 16, 18, 19, 22, 24, 27, 29, 30, 32, 34, 36, 37, 38, 39, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 55, 57, 58, 63, 64, 71, 72, 75, 76, 77, 78, 82, 86, 88, 91, 92, 96, 97, 98, 104, 106, 108, 115, 116, 118, 119, 122, 124, 125, 127, 128, 129, 132, 135, 136, 137, 139, 140, 142, 144, 146, 147, 150, 152, 158, 162, 165, 166, 170], "t": [0, 1, 4, 5, 12, 13, 17, 19, 26, 29, 30, 31, 32, 34, 36, 37, 42, 47, 49, 58, 59, 62, 64, 66, 67, 70, 71, 75, 76, 77, 82, 84, 88, 89, 92, 93, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 108, 110, 116, 122, 131, 135, 136, 142, 148, 150, 152, 158, 162, 164, 165, 167, 168, 170], "14": [0, 34, 55, 75, 82, 134, 135, 138, 142], "8e": [0, 82], "And": [0, 6, 19, 22, 58, 61], "rather": [0, 5, 6, 18, 22, 24, 30, 31, 34, 36, 37, 42, 58, 59, 62, 66, 67, 68, 74, 75, 94, 99, 101, 104, 111, 112, 115, 118, 123, 124, 125, 127, 129, 130, 132, 135, 136, 138, 139, 142, 147, 148, 149, 158, 159, 162, 164, 167, 170], "than": [0, 3, 5, 6, 13, 16, 18, 19, 22, 24, 30, 31, 32, 34, 36, 37, 42, 47, 49, 55, 58, 59, 62, 63, 64, 66, 67, 68, 70, 72, 74, 75, 77, 81, 84, 88, 89, 91, 94, 97, 98, 99, 101, 102, 104, 109, 111, 115, 116, 118, 119, 122, 123, 124, 125, 126, 127, 129, 130, 132, 135, 136, 138, 139, 142, 143, 144, 147, 148, 149, 151, 158, 159, 161, 162, 164, 167, 170], "8f": [0, 82], "001": [0, 36, 82, 92], "1000": [0, 57, 71, 82, 162], "A": [0, 2, 3, 4, 5, 6, 7, 11, 17, 18, 21, 22, 24, 31, 32, 37, 38, 39, 45, 48, 49, 51, 55, 58, 59, 63, 64, 65, 66, 68, 71, 75, 84, 86, 88, 89, 93, 94, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 108, 115, 116, 119, 125, 127, 128, 129, 130, 132, 135, 136, 140, 141, 148, 151, 158, 164, 170], "differ": [0, 1, 3, 6, 7, 12, 15, 16, 18, 19, 24, 30, 31, 32, 33, 36, 37, 38, 39, 42, 47, 49, 50, 52, 54, 57, 61, 63, 66, 68, 70, 71, 75, 76, 81, 84, 88, 89, 91, 93, 94, 96, 97, 102, 104, 109, 110, 111, 112, 115, 116, 123, 124, 125, 126, 127, 130, 132, 133, 140, 143, 144, 145, 146, 148, 149, 150, 151, 156, 157, 162, 164, 165, 166, 167, 170], "title_t_format": [0, 136], "contain": [0, 1, 3, 5, 12, 13, 18, 19, 22, 25, 27, 28, 32, 34, 35, 36, 37, 38, 39, 40, 43, 45, 46, 47, 48, 49, 51, 53, 54, 55, 56, 57, 58, 59, 63, 64, 66, 67, 70, 71, 77, 78, 82, 84, 85, 88, 89, 91, 92, 94, 96, 97, 99, 101, 102, 103, 104, 106, 108, 109, 110, 111, 115, 116, 119, 120, 127, 128, 138, 140, 142, 147, 148, 151, 153, 158, 162, 164, 165, 167], "i": [0, 1, 2, 3, 4, 5, 6, 7, 8, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 46, 47, 48, 49, 50, 51, 52, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 70, 71, 72, 73, 74, 75, 76, 77, 81, 82, 83, 84, 85, 86, 88, 89, 90, 91, 92, 94, 95, 96, 97, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 122, 123, 124, 125, 126, 127, 128, 129, 130, 132, 134, 135, 136, 137, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 154, 155, 156, 157, 158, 159, 160, 161, 162, 164, 165, 166, 167, 168, 169, 170], "dai": [0, 6, 13, 55, 136, 151], "hour": [0, 13, 36, 55, 63, 136], "minut": [0, 36, 42, 51, 55, 58, 63, 136, 143, 164, 166], "second": [0, 3, 16, 18, 19, 32, 34, 39, 47, 49, 51, 55, 63, 71, 88, 94, 98, 104, 115, 119, 125, 136, 139, 148, 151, 158, 160, 161, 164, 167, 170], "otherwis": [0, 5, 32, 58, 62, 65, 70, 86, 98, 102, 103, 104, 105, 106, 109, 115, 136, 137, 148, 154, 164], "you": [0, 2, 3, 4, 5, 12, 13, 14, 15, 16, 18, 19, 20, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 34, 35, 36, 37, 38, 39, 40, 41, 43, 44, 45, 47, 51, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 66, 67, 70, 71, 74, 75, 76, 77, 78, 80, 81, 82, 84, 85, 86, 88, 89, 90, 91, 93, 96, 97, 98, 99, 100, 101, 102, 104, 105, 106, 107, 108, 110, 111, 112, 113, 114, 116, 118, 119, 124, 125, 126, 127, 130, 132, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 149, 150, 151, 152, 153, 155, 156, 157, 158, 160, 162, 165, 166, 167, 169], "could": [0, 5, 12, 13, 29, 34, 37, 38, 39, 42, 47, 57, 58, 64, 70, 72, 75, 76, 77, 82, 84, 88, 94, 98, 106, 107, 111, 123, 132, 142, 144, 149, 150, 151, 152, 164, 167], "plotax": [0, 3, 47, 82, 130, 147], "surfac": [0, 17, 24, 27, 32, 34, 36, 37, 42, 47, 48, 50, 52, 55, 72, 75, 81, 83, 89, 96, 108, 112, 115, 123, 142, 143, 151, 162], "elev": [0, 24, 27, 34, 42, 48, 50, 52, 55, 57, 63, 72, 81, 112, 115, 130, 142, 143, 151, 162, 164, 166], "after": [0, 1, 3, 5, 6, 12, 13, 21, 25, 29, 30, 31, 34, 35, 36, 38, 39, 42, 47, 49, 52, 58, 59, 61, 63, 64, 66, 67, 70, 71, 77, 82, 89, 90, 91, 93, 98, 104, 106, 111, 115, 116, 118, 119, 123, 124, 136, 141, 144, 148, 149, 150, 152, 158, 167], "earthquak": [0, 19, 27, 32, 48, 49, 52, 114, 144, 151, 159, 162], "none": [0, 1, 2, 3, 16, 26, 29, 32, 35, 37, 42, 47, 51, 55, 63, 70, 77, 91, 94, 97, 98, 103, 104, 106, 109, 116, 118, 119, 125, 127, 128, 129, 130, 131, 134, 135, 136, 139, 148, 150, 152, 158, 164], "instead": [0, 2, 3, 13, 19, 34, 38, 39, 42, 44, 47, 49, 56, 58, 59, 62, 66, 67, 105, 106, 109, 111, 124, 125, 128, 132, 135, 139, 140, 141, 142, 151, 162, 164], "convent": [0, 3, 24, 32, 50, 57, 75, 102, 162], "mention": [0, 19, 96, 148, 149], "abov": [0, 3, 5, 13, 14, 16, 19, 22, 30, 34, 36, 38, 39, 41, 42, 43, 44, 47, 49, 52, 55, 57, 58, 59, 62, 65, 67, 70, 72, 75, 77, 82, 85, 86, 89, 98, 100, 105, 108, 109, 115, 118, 125, 127, 132, 135, 140, 142, 144, 146, 147, 148, 150, 151, 152, 158, 161, 162, 164, 167], "intern": [0, 6, 32, 47, 57, 63, 75, 125, 149, 162, 164, 170], "t_str": 0, "title_str": 0, "xlimit": [0, 47, 55, 130], "arrai": [0, 3, 6, 15, 19, 22, 24, 29, 32, 34, 35, 37, 41, 47, 48, 51, 53, 57, 63, 82, 88, 89, 91, 92, 94, 96, 97, 98, 101, 102, 103, 104, 106, 108, 109, 110, 119, 120, 121, 125, 127, 130, 132, 136, 140, 141, 142, 145, 148, 149, 150, 151, 152, 158, 162, 164, 167], "xmin": [0, 37], "xmax": [0, 37], "auto": [0, 47, 89], "x": [0, 2, 3, 5, 8, 13, 16, 19, 22, 25, 27, 29, 30, 31, 32, 34, 35, 36, 37, 41, 42, 45, 47, 48, 49, 50, 51, 55, 56, 57, 58, 59, 63, 70, 71, 72, 75, 77, 81, 82, 85, 88, 91, 92, 94, 95, 96, 98, 99, 101, 102, 103, 106, 107, 108, 110, 115, 116, 118, 130, 136, 140, 141, 142, 144, 148, 149, 150, 151, 162, 164, 167, 170], "limit": [0, 4, 6, 12, 27, 32, 35, 41, 52, 55, 63, 65, 71, 76, 81, 86, 88, 89, 94, 96, 104, 115, 121, 142, 148, 149, 150, 152, 162, 164, 170], "an": [0, 1, 2, 3, 4, 5, 6, 9, 11, 12, 16, 17, 18, 19, 22, 24, 26, 27, 29, 30, 31, 32, 34, 35, 36, 37, 41, 42, 43, 44, 47, 48, 49, 51, 52, 54, 59, 60, 61, 62, 63, 67, 68, 71, 72, 75, 76, 77, 81, 82, 84, 86, 88, 89, 90, 91, 94, 95, 96, 97, 98, 100, 101, 102, 103, 104, 105, 107, 108, 109, 111, 113, 116, 117, 119, 121, 123, 124, 125, 127, 128, 129, 130, 132, 133, 135, 136, 137, 139, 140, 141, 142, 144, 147, 148, 149, 151, 153, 156, 157, 158, 159, 162, 164, 165, 166, 167], "two": [0, 3, 4, 7, 8, 15, 17, 18, 24, 27, 30, 32, 34, 36, 37, 47, 48, 49, 51, 55, 56, 58, 63, 71, 72, 77, 82, 88, 94, 97, 98, 101, 104, 107, 109, 113, 114, 115, 116, 118, 119, 123, 124, 127, 129, 139, 140, 142, 145, 146, 150, 162, 164, 167, 170], "element": [0, 3, 24, 37, 63, 102, 104, 106, 148, 149, 150, 151], "choos": [0, 7, 60, 62, 63, 75, 101, 118, 148, 151], "automat": [0, 2, 3, 8, 11, 16, 32, 38, 39, 44, 55, 59, 66, 81, 82, 84, 88, 93, 97, 99, 105, 106, 107, 109, 116, 119, 130, 132, 148, 149, 151, 162], "ylimit": [0, 47, 55, 130, 147], "ymin": [0, 37], "ymax": [0, 37], "y": [0, 2, 3, 4, 8, 16, 17, 19, 29, 32, 34, 35, 36, 37, 41, 42, 47, 49, 50, 51, 55, 57, 59, 63, 70, 71, 75, 77, 88, 94, 98, 99, 101, 115, 118, 126, 136, 140, 141, 142, 144, 148, 149, 150, 151, 162, 164], "xticks_fonts": [0, 136], "xtick": [0, 42, 53], "mark": [0, 16, 55, 70, 115, 116], "label": [0, 32, 36, 53, 55, 57, 63, 118, 123, 135, 136, 142, 162, 164], "xticks_kwarg": [0, 136], "dictionari": [0, 1, 2, 3, 32, 37, 47, 64, 82, 88, 91, 97, 102, 103, 106, 108, 111, 158, 162, 164], "locat": [0, 5, 6, 7, 13, 19, 32, 34, 36, 49, 50, 51, 55, 57, 62, 64, 71, 72, 77, 94, 98, 100, 102, 103, 109, 111, 113, 115, 124, 126, 143, 144, 151, 158, 159, 164], "xlabel": [0, 136], "xlabel_fonts": [0, 136], "xlabel_kwarg": [0, 136], "yticks_fonts": [0, 136], "ytick": 0, "yticks_kwarg": [0, 136], "ylabel": [0, 136], "ylabel_fonts": [0, 136], "ylabel_kwarg": [0, 136], "aspect": [0, 12, 26, 31, 46, 52, 53, 71, 136, 164], "ratio": [0, 3, 6, 15, 24, 49, 53, 71, 75, 92, 102, 104, 145, 148, 149, 150], "gca": [0, 42, 53, 70], "set_aspect": [0, 42, 53, 70], "aspect_latitud": [0, 136], "longitud": [0, 32, 34, 37, 50, 51, 57, 63, 70, 75, 81, 123, 142, 151, 158, 164], "latitud": [0, 15, 32, 34, 37, 49, 50, 51, 57, 75, 81, 123, 142, 145, 151, 154, 158, 164], "coordin": [0, 4, 25, 32, 34, 36, 48, 51, 63, 77, 81, 88, 94, 98, 99, 108, 115, 142, 151, 164], "chose": [0, 68, 137], "so": [0, 5, 6, 8, 9, 13, 16, 18, 19, 21, 24, 29, 30, 31, 32, 35, 36, 37, 38, 39, 41, 42, 43, 44, 45, 47, 49, 52, 53, 55, 56, 57, 58, 59, 60, 63, 64, 66, 67, 70, 71, 72, 75, 76, 77, 78, 81, 82, 85, 88, 89, 90, 97, 98, 101, 106, 108, 109, 113, 115, 116, 118, 119, 120, 124, 125, 126, 127, 128, 129, 130, 132, 135, 136, 140, 142, 143, 144, 147, 148, 149, 150, 151, 154, 158, 161, 162, 164, 166, 167, 168], "distanc": [0, 32, 36, 49, 51, 55, 75, 151, 162, 164], "meter": [0, 18, 19, 32, 49, 51, 55, 70, 72, 75, 115, 143, 151, 158, 164, 166], "same": [0, 3, 5, 6, 8, 13, 16, 18, 19, 24, 27, 30, 33, 34, 35, 36, 37, 42, 44, 47, 49, 50, 51, 52, 55, 57, 58, 59, 62, 63, 64, 66, 68, 70, 75, 77, 78, 81, 82, 83, 84, 88, 92, 94, 96, 97, 98, 101, 102, 104, 109, 110, 118, 119, 120, 124, 125, 130, 132, 136, 139, 140, 142, 148, 149, 150, 151, 156, 162, 164, 167], "cover": [0, 6, 7, 29, 30, 32, 34, 36, 37, 41, 42, 55, 63, 70, 75, 115, 120, 125, 144, 150, 162], "broad": [0, 164], "rang": [0, 3, 5, 13, 32, 47, 51, 55, 115, 119, 124, 141, 142], "middl": [0, 102, 124], "most": [0, 3, 19, 22, 24, 29, 31, 34, 36, 38, 39, 43, 44, 47, 49, 52, 54, 55, 56, 57, 58, 61, 63, 66, 70, 71, 76, 77, 78, 81, 82, 84, 86, 94, 98, 99, 104, 107, 108, 110, 115, 116, 118, 124, 126, 132, 135, 137, 138, 139, 140, 141, 142, 143, 147, 148, 149, 151, 154, 155, 167], "interest": [0, 5, 12, 16, 17, 19, 20, 25, 29, 31, 34, 36, 37, 42, 53, 71, 72, 89, 106, 113, 115, 116, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 144, 148, 158], "gener": [0, 1, 2, 3, 4, 5, 6, 7, 9, 11, 13, 14, 16, 17, 18, 19, 21, 22, 26, 27, 30, 31, 34, 36, 41, 42, 43, 44, 47, 48, 49, 52, 55, 57, 59, 61, 64, 66, 67, 68, 72, 75, 76, 77, 81, 82, 83, 84, 86, 89, 90, 92, 94, 99, 100, 101, 103, 104, 105, 108, 109, 111, 113, 115, 119, 123, 125, 136, 139, 142, 143, 146, 148, 149, 153, 159, 161, 162, 167, 168], "appropri": [0, 4, 5, 6, 13, 16, 19, 26, 30, 48, 52, 53, 55, 59, 61, 63, 64, 68, 71, 74, 76, 88, 91, 92, 93, 97, 99, 100, 101, 102, 103, 116, 129, 140, 143, 148, 158, 167, 170], "valu": [0, 3, 5, 6, 7, 16, 18, 19, 22, 24, 29, 32, 35, 36, 37, 38, 39, 41, 42, 44, 47, 48, 49, 51, 53, 54, 55, 57, 63, 64, 66, 68, 70, 71, 72, 75, 76, 77, 82, 89, 94, 96, 97, 98, 101, 102, 103, 104, 106, 108, 109, 115, 116, 119, 120, 122, 123, 125, 127, 129, 130, 132, 135, 139, 140, 142, 143, 144, 148, 149, 150, 151, 152, 154, 158, 159, 162, 164, 165, 167, 170], "np": [0, 32, 41, 88, 94, 98, 101, 141, 150], "co": [0, 26, 32, 37, 42, 51, 53, 59, 70, 88, 101, 144], "pi": [0, 42, 51, 53, 70, 88, 101], "180": [0, 32, 42, 53, 63, 70, 75], "useoffset": [0, 42, 53, 136], "boolean": [0, 3, 55, 70, 97, 102, 148, 149, 151], "tick": [0, 55, 136], "mai": [0, 1, 2, 3, 4, 5, 6, 12, 13, 17, 19, 20, 21, 22, 24, 25, 26, 27, 29, 30, 31, 32, 34, 36, 37, 38, 39, 40, 42, 43, 44, 49, 50, 51, 52, 53, 55, 57, 58, 61, 62, 65, 66, 68, 70, 71, 72, 75, 76, 81, 82, 84, 85, 86, 89, 90, 93, 94, 96, 97, 98, 101, 103, 104, 107, 109, 111, 115, 116, 118, 121, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 142, 143, 144, 146, 147, 148, 149, 150, 151, 158, 159, 160, 162, 164, 165, 167], "offset": [0, 53, 55, 63, 158, 164], "from": [0, 1, 3, 4, 5, 6, 7, 12, 14, 15, 16, 17, 18, 19, 20, 25, 28, 29, 31, 34, 36, 38, 39, 41, 46, 47, 48, 49, 52, 55, 56, 57, 59, 60, 61, 62, 64, 65, 66, 67, 71, 72, 74, 75, 77, 81, 82, 86, 87, 88, 90, 91, 94, 95, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 108, 109, 111, 112, 113, 115, 116, 118, 119, 120, 123, 124, 125, 127, 130, 131, 132, 135, 136, 137, 138, 139, 140, 141, 143, 144, 145, 148, 149, 150, 151, 152, 154, 156, 157, 158, 159, 160, 162, 165, 166, 167, 168], "some": [0, 3, 4, 5, 6, 7, 8, 10, 12, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 27, 29, 30, 32, 34, 36, 37, 38, 39, 42, 44, 47, 48, 49, 50, 52, 53, 55, 56, 57, 58, 59, 62, 67, 70, 75, 76, 77, 81, 83, 84, 86, 89, 90, 92, 96, 97, 98, 100, 101, 103, 105, 106, 107, 108, 110, 111, 113, 114, 115, 116, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 140, 142, 143, 144, 147, 148, 149, 150, 152, 153, 154, 158, 159, 161, 162, 164, 167], "common": [0, 3, 18, 19, 25, 30, 38, 39, 43, 44, 66, 67, 78, 81, 88, 102, 104, 106, 107, 118, 125, 127, 130, 136, 165, 167], "print": [0, 1, 3, 7, 31, 37, 42, 55, 57, 63, 64, 70, 71, 82, 94, 98, 99, 100, 106, 108, 110, 111, 119, 120, 123, 125, 126, 127, 134, 142, 148, 150, 152, 158, 165], "corner": [0, 3, 32, 34, 57, 75, 77, 94, 142, 148, 150, 152, 162, 164], "often": [0, 6, 11, 13, 16, 19, 22, 29, 31, 34, 37, 38, 39, 43, 44, 47, 48, 52, 53, 54, 63, 64, 68, 72, 75, 77, 98, 110, 111, 115, 116, 132, 136, 139, 140, 142, 143, 144, 147, 148, 151, 158, 162, 166, 167, 170], "nicer": [0, 84, 136], "full": [0, 5, 6, 14, 19, 37, 59, 61, 62, 63, 77, 82, 91, 98, 104, 108, 135, 146, 148, 162, 167], "each": [0, 1, 2, 3, 5, 6, 7, 12, 16, 18, 19, 20, 24, 32, 34, 36, 37, 45, 47, 49, 51, 55, 57, 58, 59, 63, 64, 67, 70, 71, 72, 75, 76, 77, 80, 81, 82, 84, 88, 89, 92, 94, 97, 98, 99, 101, 102, 103, 104, 106, 108, 115, 116, 118, 119, 120, 124, 125, 127, 128, 130, 135, 136, 137, 139, 140, 141, 142, 144, 147, 148, 149, 150, 151, 152, 158, 161, 162, 164, 166, 170], "which": [0, 1, 3, 4, 5, 6, 7, 11, 12, 13, 14, 16, 18, 19, 22, 24, 27, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 45, 46, 47, 49, 50, 52, 55, 57, 58, 59, 60, 61, 62, 63, 64, 66, 68, 70, 71, 72, 75, 76, 77, 82, 84, 85, 88, 89, 91, 92, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 107, 108, 109, 110, 113, 115, 116, 118, 119, 120, 123, 125, 127, 128, 130, 132, 135, 136, 137, 139, 140, 141, 142, 143, 144, 148, 149, 150, 151, 154, 158, 159, 162, 164, 166, 167, 169, 170], "should": [0, 1, 2, 3, 4, 5, 6, 12, 13, 14, 16, 19, 20, 21, 22, 24, 25, 27, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 47, 49, 52, 55, 57, 58, 59, 60, 61, 62, 63, 66, 68, 70, 71, 74, 75, 76, 77, 81, 82, 84, 89, 94, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 108, 109, 111, 112, 115, 116, 118, 119, 120, 123, 125, 126, 127, 130, 135, 136, 137, 139, 140, 141, 143, 144, 146, 147, 148, 149, 150, 151, 152, 153, 158, 160, 162, 164, 165, 167, 169, 170], "ticklabel_format": [0, 42, 53], "issu": [0, 19, 24, 26, 28, 58, 59, 62, 71, 88, 93, 94, 96, 104, 105, 107, 116, 118, 119, 124, 125, 126, 127, 140, 151, 165], "grid": [0, 4, 7, 17, 18, 19, 21, 22, 24, 25, 27, 29, 30, 41, 42, 47, 48, 50, 52, 55, 56, 63, 70, 71, 72, 77, 78, 81, 86, 88, 96, 97, 98, 99, 101, 102, 103, 104, 106, 108, 115, 116, 118, 119, 120, 122, 123, 125, 126, 127, 130, 132, 134, 135, 136, 137, 140, 141, 142, 143, 144, 148, 149, 150, 152, 159, 161, 162, 164, 166, 167, 170], "grid_kwarg": [0, 136], "add": [0, 11, 12, 13, 16, 17, 18, 19, 29, 30, 32, 47, 51, 55, 58, 59, 61, 62, 67, 70, 71, 75, 81, 88, 93, 94, 98, 99, 101, 109, 118, 120, 123, 125, 126, 127, 130, 136, 141, 152, 154, 158, 162, 164, 168], "line": [0, 1, 3, 4, 16, 19, 30, 31, 32, 34, 35, 42, 44, 47, 48, 49, 50, 51, 54, 55, 57, 58, 63, 64, 66, 67, 71, 77, 81, 82, 96, 97, 99, 104, 108, 109, 110, 111, 118, 119, 120, 123, 125, 132, 136, 137, 142, 147, 148, 150, 158, 162, 164], "linewidth": [0, 82, 142], "afterax": [0, 29, 47, 55, 82, 136], "function": [0, 1, 2, 3, 5, 7, 15, 17, 18, 19, 24, 25, 27, 29, 30, 32, 34, 37, 42, 47, 48, 49, 54, 55, 57, 66, 67, 68, 72, 75, 81, 82, 83, 88, 89, 91, 92, 93, 94, 95, 97, 100, 101, 102, 103, 106, 109, 110, 115, 116, 118, 119, 120, 123, 124, 125, 126, 127, 132, 135, 136, 140, 142, 144, 145, 147, 148, 149, 150, 151, 152, 158, 162, 163, 164, 165, 167], "execut": [0, 1, 3, 14, 16, 19, 21, 29, 31, 34, 38, 39, 47, 63, 71, 82, 84, 91, 93, 99, 111, 116, 118, 140, 146, 165], "exec": [0, 1, 3, 82], "defin": [0, 1, 3, 5, 6, 7, 24, 29, 32, 34, 36, 37, 41, 42, 44, 55, 63, 64, 66, 70, 71, 75, 82, 84, 88, 91, 94, 100, 101, 103, 104, 106, 108, 109, 115, 119, 127, 132, 136, 140, 150, 152, 158, 162, 164, 165, 167, 170], "have": [0, 1, 2, 3, 4, 5, 6, 8, 9, 11, 12, 13, 14, 16, 18, 19, 20, 22, 24, 25, 26, 27, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 42, 44, 45, 47, 48, 49, 51, 52, 55, 56, 58, 59, 60, 62, 66, 67, 68, 70, 71, 72, 75, 76, 77, 81, 82, 84, 85, 86, 88, 89, 92, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 111, 113, 115, 116, 118, 119, 120, 122, 123, 124, 125, 126, 127, 129, 130, 132, 133, 135, 136, 137, 139, 140, 141, 142, 143, 148, 149, 151, 153, 154, 158, 162, 164, 165, 167], "argument": [0, 1, 2, 3, 29, 32, 37, 48, 51, 54, 55, 57, 82, 88, 89, 93, 94, 97, 101, 103, 104, 106, 109, 116, 127, 136, 140, 142, 147, 148, 149, 158, 164, 167], "current_data": [0, 3, 27, 47, 81, 82], "version": [0, 1, 4, 5, 6, 7, 8, 9, 11, 13, 15, 16, 18, 19, 22, 24, 25, 30, 32, 34, 36, 41, 42, 44, 45, 47, 48, 49, 50, 52, 55, 57, 60, 61, 63, 64, 67, 68, 70, 71, 75, 76, 78, 81, 82, 84, 85, 89, 92, 96, 97, 99, 102, 104, 105, 107, 110, 112, 115, 116, 118, 119, 120, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 138, 140, 141, 142, 144, 145, 146, 148, 149, 150, 151, 152, 156, 157, 158, 162, 164, 167, 170], "liner": [0, 32], "pylab": [0, 42, 82], "my": [0, 22, 24, 57, 77, 89, 99, 150, 162], "custom": [0, 13, 16, 22, 24, 27, 67, 71, 78, 81, 89, 95, 101, 144], "sinc": [0, 3, 4, 5, 6, 16, 19, 22, 24, 30, 34, 36, 42, 44, 45, 51, 52, 55, 57, 58, 59, 62, 63, 66, 67, 72, 75, 76, 77, 81, 82, 88, 89, 90, 97, 98, 115, 116, 118, 119, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 142, 143, 148, 149, 151, 162, 165, 166], "ha": [0, 4, 5, 6, 8, 12, 13, 14, 16, 18, 19, 20, 22, 23, 24, 25, 26, 29, 30, 31, 34, 36, 37, 38, 39, 42, 45, 47, 49, 54, 55, 56, 57, 58, 59, 63, 64, 66, 68, 70, 71, 72, 75, 77, 78, 82, 86, 89, 91, 94, 98, 101, 102, 103, 106, 107, 109, 111, 112, 113, 115, 116, 117, 118, 119, 120, 125, 126, 127, 128, 129, 130, 132, 135, 136, 137, 138, 140, 142, 143, 148, 149, 151, 154, 158, 161, 162, 164, 167, 168, 170], "been": [0, 1, 4, 5, 8, 9, 13, 14, 16, 18, 19, 20, 22, 23, 24, 26, 27, 29, 30, 31, 34, 35, 36, 37, 38, 39, 42, 45, 47, 48, 49, 52, 55, 56, 57, 58, 59, 64, 66, 68, 70, 71, 75, 78, 82, 84, 86, 89, 91, 97, 98, 102, 103, 106, 107, 108, 109, 111, 113, 115, 117, 118, 119, 120, 122, 125, 126, 127, 128, 129, 130, 132, 133, 135, 136, 137, 139, 140, 142, 148, 149, 151, 154, 162, 164, 167], "import": [0, 3, 5, 18, 19, 24, 30, 34, 36, 40, 41, 42, 47, 51, 52, 55, 57, 60, 62, 63, 67, 68, 70, 75, 78, 82, 84, 88, 89, 91, 93, 94, 96, 97, 98, 99, 100, 101, 103, 104, 105, 106, 108, 116, 118, 125, 130, 140, 141, 142, 143, 144, 148, 149, 150, 151, 152, 154, 162, 164, 166, 168], "modul": [0, 7, 8, 12, 18, 19, 27, 30, 31, 34, 36, 42, 44, 48, 49, 53, 55, 56, 57, 62, 64, 67, 70, 75, 76, 81, 82, 83, 84, 88, 89, 92, 93, 97, 101, 102, 103, 106, 110, 111, 116, 118, 120, 121, 123, 126, 127, 128, 129, 130, 137, 139, 142, 148, 149, 151, 158, 162, 163], "form": [0, 2, 3, 4, 5, 6, 8, 12, 19, 21, 22, 24, 26, 30, 31, 32, 34, 36, 38, 39, 41, 45, 46, 47, 49, 51, 55, 59, 64, 65, 68, 75, 77, 86, 89, 98, 102, 104, 108, 109, 115, 120, 127, 128, 129, 130, 139, 140, 142, 148, 149, 150, 151, 156, 162, 164, 167, 170], "better": [0, 6, 18, 19, 24, 34, 42, 47, 49, 70, 71, 72, 76, 77, 81, 104, 113, 115, 118, 124, 125, 126, 129, 130, 132, 133], "want": [0, 2, 3, 10, 12, 13, 14, 19, 21, 22, 26, 30, 31, 34, 35, 36, 37, 38, 39, 40, 42, 43, 44, 47, 51, 54, 55, 58, 59, 61, 62, 63, 66, 67, 68, 70, 76, 77, 82, 84, 88, 89, 90, 91, 97, 98, 99, 111, 114, 116, 124, 127, 130, 136, 138, 140, 141, 142, 146, 147, 150, 155, 158, 162, 164, 165], "do": [0, 1, 4, 6, 8, 11, 12, 13, 15, 18, 19, 21, 22, 27, 30, 31, 34, 35, 36, 38, 39, 40, 42, 43, 44, 47, 52, 54, 55, 56, 58, 61, 62, 66, 67, 70, 75, 76, 77, 82, 84, 88, 89, 93, 94, 96, 97, 98, 99, 100, 101, 105, 107, 108, 109, 111, 114, 115, 116, 118, 119, 123, 124, 125, 126, 127, 129, 130, 132, 135, 136, 144, 145, 147, 148, 149, 150, 151, 156, 157, 158, 160, 162, 165, 167, 168], "sever": [0, 1, 2, 5, 10, 12, 16, 19, 22, 24, 25, 26, 31, 32, 36, 37, 38, 39, 43, 47, 50, 52, 55, 59, 62, 64, 71, 72, 75, 81, 105, 115, 116, 117, 119, 120, 123, 124, 125, 126, 128, 129, 130, 132, 142, 147, 151, 160, 162, 164, 167], "thing": [0, 13, 16, 19, 24, 30, 31, 42, 52, 58, 63, 84, 93, 115, 116, 118, 126, 131, 139], "need": [0, 4, 5, 6, 12, 13, 15, 16, 18, 19, 20, 21, 22, 24, 29, 30, 31, 34, 35, 36, 37, 38, 39, 40, 42, 43, 44, 47, 49, 52, 53, 57, 58, 59, 60, 62, 63, 64, 66, 67, 70, 71, 75, 76, 77, 78, 84, 85, 88, 89, 91, 96, 97, 98, 99, 101, 104, 108, 110, 111, 113, 115, 116, 118, 120, 124, 125, 127, 128, 132, 134, 135, 136, 137, 139, 140, 142, 144, 145, 146, 148, 149, 150, 151, 152, 156, 157, 158, 159, 160, 162, 164, 166, 167, 170], "access": [0, 17, 29, 31, 59, 62, 93, 94, 96, 104, 106, 109], "data": [0, 1, 3, 5, 18, 19, 27, 29, 32, 34, 35, 36, 37, 38, 39, 41, 42, 43, 45, 47, 48, 50, 51, 57, 58, 63, 64, 65, 66, 70, 71, 73, 81, 82, 83, 84, 86, 88, 91, 94, 97, 98, 100, 102, 103, 104, 106, 109, 112, 113, 114, 115, 118, 119, 121, 122, 124, 125, 127, 128, 129, 130, 132, 136, 137, 139, 140, 142, 143, 149, 150, 152, 158, 161, 163, 168], "store": [0, 1, 13, 19, 35, 37, 43, 55, 57, 58, 71, 77, 97, 98, 101, 106, 107, 108, 116, 119, 125, 147, 149, 151, 158, 161, 162, 164], "def": [0, 1, 3, 47, 55, 70, 82, 88, 94, 98, 101, 104, 150, 152, 158], "1d": [0, 4, 7, 15, 19, 21, 24, 27, 31, 32, 37, 48, 49, 63, 67, 71, 72, 81, 82, 88, 96, 99, 100, 102, 104, 110, 112, 118, 123, 126, 128, 129, 137, 140, 141, 145, 149, 157, 164, 167], "alreadi": [0, 1, 6, 12, 13, 19, 20, 30, 31, 44, 59, 60, 62, 63, 64, 70, 84, 85, 99, 103, 105, 108, 110, 118, 120, 128, 135, 136, 137, 146, 164], "xlower": [0, 3, 16, 24, 29, 42, 49, 89, 127, 150, 152, 162, 164, 167], "xupper": [0, 24, 49, 150, 152, 164], "k": [0, 3, 4, 6, 17, 71, 92, 97, 102, 108, 142], "get": [0, 10, 13, 19, 26, 30, 43, 48, 55, 57, 58, 60, 61, 62, 66, 67, 70, 81, 85, 88, 89, 94, 97, 98, 99, 105, 107, 108, 109, 110, 113, 114, 116, 126, 140, 142, 149, 158, 164, 165], "variabl": [0, 3, 5, 13, 14, 18, 19, 24, 27, 29, 30, 32, 34, 37, 38, 39, 40, 43, 47, 48, 49, 54, 55, 58, 61, 62, 71, 74, 76, 77, 78, 82, 88, 89, 97, 99, 103, 104, 106, 107, 109, 111, 118, 123, 124, 125, 127, 129, 135, 136, 139, 140, 148, 149, 150, 152, 158, 162, 164, 165, 167], "just": [0, 6, 30, 34, 43, 58, 59, 88, 89, 91, 93, 97, 98, 99, 100, 101, 106, 109, 120, 127, 148, 167], "avail": [0, 4, 5, 10, 12, 16, 24, 25, 31, 34, 36, 42, 46, 47, 50, 52, 55, 62, 66, 70, 71, 72, 78, 81, 83, 84, 88, 91, 96, 97, 98, 100, 102, 104, 107, 108, 109, 110, 111, 115, 126, 137, 140, 141, 143, 148, 150, 153, 158, 159, 162], "var": [0, 3, 13, 29, 37, 158], "min": [0, 102, 164, 170], "max": [0, 32, 34, 42, 71, 102, 115, 120, 144, 150, 152, 164, 170], "primarili": [0, 19, 56, 77, 127, 128], "where": [0, 1, 3, 5, 6, 12, 13, 16, 18, 19, 24, 29, 32, 34, 36, 37, 38, 39, 41, 42, 43, 47, 48, 49, 52, 55, 57, 62, 63, 64, 66, 68, 70, 71, 72, 77, 78, 84, 91, 94, 95, 96, 97, 99, 102, 111, 115, 118, 119, 120, 123, 124, 125, 130, 132, 139, 141, 142, 143, 144, 147, 148, 149, 150, 151, 152, 158, 161, 162, 164, 167, 170], "horizont": [0, 55, 164], "implement": [0, 1, 4, 5, 7, 14, 16, 18, 19, 32, 42, 49, 63, 64, 67, 74, 86, 101, 102, 104, 108, 109, 116, 122, 125, 128, 130, 132, 140, 141, 148, 164, 167, 170], "claw": [0, 5, 6, 8, 11, 12, 13, 14, 15, 16, 18, 19, 21, 22, 24, 26, 30, 32, 34, 35, 36, 37, 38, 39, 40, 41, 43, 44, 46, 47, 48, 49, 51, 53, 54, 56, 58, 59, 61, 62, 63, 66, 67, 71, 74, 75, 76, 83, 88, 91, 93, 96, 97, 98, 99, 105, 107, 111, 112, 113, 114, 115, 116, 118, 119, 120, 122, 123, 126, 127, 129, 135, 136, 140, 144, 145, 150, 151, 152, 154, 155, 156, 157, 160, 161, 162, 164, 165, 167, 168], "visclaw": [0, 1, 7, 13, 24, 25, 26, 30, 36, 42, 47, 48, 50, 53, 55, 59, 60, 61, 62, 66, 70, 71, 78, 82, 83, 84, 85, 96, 100, 105, 111, 146, 147, 153], "src": [0, 5, 6, 11, 14, 15, 16, 18, 19, 21, 22, 30, 32, 34, 35, 36, 37, 42, 43, 44, 49, 51, 54, 56, 59, 62, 63, 66, 67, 71, 75, 76, 83, 100, 101, 109, 111, 112, 115, 116, 118, 120, 123, 124, 126, 127, 128, 129, 130, 132, 136, 137, 140, 144, 145, 148, 150, 152, 154, 156, 164, 165, 170], "python": [0, 3, 4, 7, 8, 11, 13, 14, 17, 21, 24, 25, 27, 29, 30, 31, 32, 35, 36, 37, 38, 39, 40, 43, 45, 47, 48, 50, 51, 54, 55, 57, 58, 59, 60, 61, 62, 63, 75, 77, 78, 81, 82, 83, 86, 87, 89, 93, 94, 96, 97, 99, 100, 101, 102, 104, 107, 108, 109, 116, 118, 120, 121, 123, 125, 126, 127, 128, 129, 132, 136, 137, 140, 141, 146, 151, 162, 164, 165, 168], "gaugetool": [0, 47, 123], "time_scal": 0, "scale": [0, 4, 32, 53, 55, 71, 78, 96, 97, 118, 119, 125, 127, 132, 151], "3600": [0, 34, 36, 77], "time_label": 0, "time_label_fonts": 0, "time_label_kwarg": [0, 136], "new_plotitem": [0, 3, 47, 55, 82, 147], "plot_typ": [0, 24, 47, 55, 82, 84, 147], "return": [0, 1, 2, 3, 32, 35, 37, 40, 51, 55, 63, 67, 70, 71, 82, 84, 91, 92, 94, 97, 98, 101, 102, 103, 104, 106, 109, 116, 126, 140, 142, 148, 150, 152, 158, 160, 164, 167, 170], "clawplotitem": [0, 1, 7, 24, 29, 81, 83, 118, 124, 127, 136, 147], "associ": [0, 1, 2, 6, 24, 55, 62, 76, 94, 97, 98, 116], "kei": [0, 1, 2, 13, 30, 32, 47, 97, 104, 108, 109, 158, 164], "provid": [0, 2, 4, 7, 10, 16, 19, 22, 29, 30, 32, 34, 36, 37, 41, 44, 48, 49, 50, 51, 52, 55, 57, 58, 63, 65, 67, 72, 75, 77, 81, 86, 89, 91, 92, 97, 98, 99, 101, 103, 104, 108, 109, 110, 113, 114, 116, 118, 124, 132, 136, 138, 140, 148, 157, 158, 161, 162, 164, 167], "one": [0, 1, 2, 3, 4, 5, 6, 8, 13, 15, 16, 18, 19, 22, 24, 26, 27, 29, 30, 31, 32, 34, 36, 37, 38, 39, 42, 47, 49, 50, 55, 57, 58, 59, 60, 61, 62, 63, 64, 68, 70, 71, 72, 74, 75, 77, 78, 81, 82, 88, 94, 97, 98, 99, 101, 103, 104, 105, 108, 109, 111, 113, 115, 116, 118, 124, 125, 127, 132, 135, 139, 140, 141, 142, 144, 145, 147, 148, 149, 150, 151, 152, 153, 156, 157, 158, 162, 164, 167, 168], "item1": [0, 84], "etc": [0, 2, 16, 21, 22, 26, 29, 30, 34, 35, 36, 52, 55, 58, 61, 63, 67, 77, 81, 89, 140, 147, 148, 151, 158, 167], "gethandl": [0, 2, 3], "handl": [0, 2, 3, 6, 34, 42, 44, 48, 57, 63, 76, 78, 81, 94, 97, 101, 103, 104, 106, 107, 108, 109, 111, 118, 119, 120, 122, 123, 125, 127, 128, 129, 130, 141, 144, 158, 164], "plot": [1, 2, 4, 7, 8, 12, 29, 31, 32, 38, 39, 40, 42, 43, 44, 45, 48, 49, 57, 59, 60, 63, 70, 77, 87, 88, 90, 91, 94, 95, 96, 98, 103, 105, 107, 108, 110, 111, 113, 118, 122, 123, 124, 125, 126, 127, 129, 130, 131, 135, 136, 142, 148, 160, 164], "outdir": [1, 3, 35, 36, 37, 38, 39, 47, 54, 66, 81, 84, 91, 93, 94, 98, 124, 150, 152, 165], "path": [1, 5, 13, 14, 32, 34, 37, 41, 42, 44, 47, 49, 51, 55, 58, 61, 62, 64, 66, 70, 74, 81, 82, 91, 96, 97, 99, 103, 109, 126, 127, 130, 136, 146, 151, 158, 164, 165], "directori": [1, 3, 5, 6, 11, 12, 13, 14, 15, 16, 19, 21, 22, 24, 25, 27, 30, 31, 33, 34, 36, 37, 38, 39, 40, 43, 45, 46, 47, 48, 51, 54, 55, 58, 59, 61, 63, 67, 71, 76, 80, 81, 84, 91, 93, 94, 96, 97, 98, 101, 108, 111, 112, 113, 115, 116, 118, 119, 124, 125, 126, 127, 129, 139, 140, 144, 145, 146, 147, 148, 149, 153, 156, 157, 160, 161, 162, 165, 167, 168], "clawpack": [1, 2, 4, 5, 6, 7, 11, 16, 18, 19, 28, 30, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 44, 45, 47, 48, 49, 50, 51, 52, 54, 55, 62, 63, 64, 65, 67, 70, 71, 73, 74, 75, 76, 77, 80, 81, 82, 83, 84, 85, 86, 87, 88, 90, 91, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 106, 107, 108, 109, 110, 111, 114, 116, 117, 119, 120, 121, 122, 123, 124, 125, 139, 140, 142, 146, 148, 149, 150, 151, 153, 155, 158, 160, 162, 164, 165, 167, 168, 170], "output": [1, 5, 7, 8, 13, 14, 16, 27, 29, 30, 31, 32, 35, 37, 38, 39, 43, 44, 47, 48, 50, 51, 53, 54, 55, 59, 64, 72, 75, 81, 82, 84, 89, 91, 92, 93, 94, 95, 96, 99, 100, 102, 103, 104, 105, 106, 108, 109, 111, 118, 119, 123, 124, 125, 126, 127, 129, 130, 131, 135, 136, 137, 140, 147, 150, 152, 158, 159, 160, 161, 164, 167, 168], "plotdir": [1, 84, 147], "hardcopi": [1, 82, 84, 147], "file": [1, 5, 6, 7, 8, 9, 11, 12, 14, 15, 18, 19, 20, 21, 22, 24, 25, 27, 29, 30, 32, 35, 37, 38, 39, 41, 43, 44, 45, 47, 48, 49, 50, 52, 54, 56, 62, 63, 64, 66, 70, 75, 77, 78, 81, 83, 86, 89, 91, 93, 94, 96, 97, 98, 99, 100, 101, 103, 106, 107, 109, 111, 112, 113, 115, 118, 119, 120, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 141, 143, 144, 145, 146, 147, 148, 149, 150, 152, 155, 156, 157, 158, 159, 161, 164, 165, 166, 168], "put": [1, 11, 16, 30, 31, 44, 58, 62, 63, 71, 88, 93, 101, 125, 146], "overwrit": [1, 91, 98, 103], "ok": [1, 39, 40, 91, 99, 109, 120, 160, 164], "old": [1, 7, 22, 24, 34, 42, 58, 59, 84, 91, 99, 100, 101, 104, 116, 124, 126, 127, 132, 135, 137, 140, 151, 162], "afterfram": [1, 29, 81], "produc": [1, 3, 24, 29, 32, 37, 38, 39, 43, 47, 48, 55, 57, 58, 63, 71, 76, 80, 81, 97, 115, 116, 132, 147, 164], "frame": [1, 2, 3, 29, 36, 37, 47, 55, 71, 77, 81, 82, 84, 88, 91, 95, 97, 99, 103, 105, 109, 125, 135, 136, 139, 147, 150, 152, 153], "done": [1, 6, 7, 8, 11, 13, 16, 21, 22, 30, 36, 38, 39, 42, 47, 50, 55, 57, 58, 60, 63, 66, 70, 71, 75, 81, 82, 84, 88, 92, 93, 96, 109, 115, 120, 124, 125, 129, 139, 140, 142, 147, 149, 151, 161, 164, 165, 166], "beforefram": [1, 29, 127], "befor": [1, 3, 4, 6, 14, 19, 30, 32, 34, 36, 37, 38, 39, 42, 43, 44, 47, 57, 58, 59, 60, 62, 63, 66, 67, 71, 76, 77, 84, 88, 91, 97, 99, 104, 106, 111, 115, 116, 118, 119, 120, 131, 135, 136, 138, 140, 143, 144, 148, 149, 162, 164, 165], "start": [1, 2, 4, 5, 6, 7, 9, 13, 14, 19, 26, 29, 30, 32, 34, 36, 38, 39, 40, 41, 42, 43, 47, 48, 49, 51, 55, 57, 58, 59, 60, 61, 62, 63, 66, 70, 74, 75, 77, 82, 84, 88, 99, 103, 104, 110, 111, 115, 116, 124, 127, 132, 138, 139, 140, 142, 144, 151, 154, 158, 160, 162, 167], "printfig": 1, "png": [1, 13, 38, 39, 42, 43, 55, 63, 70, 71, 125, 130, 142], "make": [1, 5, 11, 13, 14, 19, 21, 22, 24, 26, 27, 29, 30, 34, 36, 38, 39, 41, 43, 44, 47, 50, 52, 54, 55, 58, 59, 62, 63, 64, 66, 67, 68, 71, 76, 78, 81, 84, 85, 88, 89, 91, 94, 95, 96, 97, 101, 103, 109, 114, 116, 118, 119, 123, 124, 125, 126, 127, 129, 130, 131, 132, 133, 135, 136, 140, 142, 148, 162, 164, 166, 167], "html": [1, 12, 13, 25, 30, 32, 38, 39, 43, 46, 47, 55, 58, 59, 75, 81, 82, 93, 97, 99, 100, 110, 111, 116, 118, 128, 130, 135, 136, 158], "latex": [1, 55, 81, 100], "exist": [1, 19, 23, 32, 33, 36, 38, 39, 55, 62, 66, 70, 71, 82, 94, 98, 101, 103, 106, 109, 120, 126, 127, 144, 158, 164, 166], "print_format": [1, 55], "print_frameno": [1, 55], "list": [1, 3, 4, 7, 8, 9, 11, 13, 17, 18, 19, 20, 24, 27, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 43, 47, 49, 55, 57, 58, 60, 61, 62, 63, 65, 66, 67, 68, 71, 72, 75, 76, 77, 82, 84, 86, 88, 91, 92, 94, 97, 98, 100, 101, 102, 103, 104, 106, 107, 109, 111, 115, 118, 123, 125, 127, 132, 135, 136, 137, 139, 142, 146, 148, 149, 150, 151, 152, 158, 159, 161, 164], "int": [1, 2, 3, 32, 34, 63, 91, 92, 94, 97, 98, 103, 106, 148, 149, 151, 158, 164], "print_figno": [1, 55, 118], "iplotclaw_figno": 1, "interact": [1, 13, 24, 38, 39, 43, 47, 50, 66, 78, 81, 82, 89, 99, 100, 104, 105, 108, 111, 124, 125, 142], "mode": [1, 13, 30, 109, 161], "displai": [1, 13, 38, 39, 43, 47, 55, 63, 82, 98, 116, 151], "latex_fnam": 1, "tex": 1, "latex_titl": 1, "go": [1, 5, 13, 16, 19, 24, 27, 30, 32, 38, 39, 58, 59, 60, 62, 67, 70, 71, 77, 84, 88, 91, 93, 96, 97, 102, 117, 124, 125, 132, 139, 143, 147, 153, 158, 162, 166, 170], "result": [1, 3, 4, 7, 9, 12, 17, 18, 19, 27, 28, 31, 32, 34, 35, 36, 38, 39, 40, 45, 46, 47, 48, 51, 52, 57, 58, 59, 62, 63, 66, 68, 71, 72, 75, 77, 81, 82, 83, 84, 87, 91, 93, 96, 98, 102, 105, 109, 115, 116, 118, 119, 123, 125, 126, 127, 128, 130, 132, 135, 136, 144, 148, 149, 150, 152, 160, 162, 164, 166], "latex_framesperpag": 1, "how": [1, 6, 7, 12, 16, 24, 26, 30, 31, 32, 34, 36, 38, 39, 41, 42, 44, 47, 50, 55, 59, 63, 64, 66, 70, 75, 76, 77, 81, 91, 93, 95, 96, 97, 101, 104, 108, 109, 111, 113, 114, 115, 116, 120, 125, 127, 129, 130, 135, 138, 139, 140, 147, 148, 151, 153, 162, 164, 168], "mani": [1, 3, 4, 6, 12, 13, 18, 19, 22, 23, 24, 30, 36, 38, 39, 40, 44, 45, 46, 49, 50, 55, 56, 58, 63, 64, 66, 67, 70, 75, 76, 77, 82, 84, 85, 86, 88, 93, 96, 101, 103, 108, 109, 115, 117, 118, 119, 125, 127, 128, 129, 130, 134, 137, 140, 142, 147, 148, 149, 151, 162, 167], "try": [1, 30, 31, 38, 39, 40, 47, 55, 57, 62, 63, 70, 82, 90, 93, 96, 97, 103, 105, 107, 108, 109, 111, 116, 148, 160, 164, 165], "page": [1, 4, 9, 11, 13, 15, 17, 19, 20, 24, 26, 30, 52, 57, 59, 60, 61, 62, 93, 96, 99, 100, 107, 110, 112, 116, 118, 126, 130, 135, 136, 137, 143, 145, 147, 153, 156, 157, 166, 167], "latex_framesperlin": 1, "latex_figsperlin": 1, "recal": [1, 12, 42, 149], "latex_pdf": 1, "run": [1, 5, 6, 7, 12, 13, 14, 16, 19, 22, 24, 26, 27, 30, 34, 35, 36, 37, 42, 43, 45, 46, 47, 48, 54, 55, 56, 58, 59, 60, 61, 62, 63, 64, 66, 68, 71, 77, 78, 81, 82, 84, 85, 87, 89, 91, 94, 95, 96, 98, 101, 105, 107, 108, 109, 111, 113, 115, 118, 119, 120, 124, 125, 126, 127, 128, 129, 131, 132, 134, 139, 140, 150, 151, 152, 158, 160, 161, 164, 167], "pdflatex": 1, "pdf": [1, 32], "index": [1, 6, 13, 24, 25, 29, 35, 37, 47, 58, 59, 82, 94, 96, 99, 101, 102, 109, 118, 127, 132, 136, 148, 149, 150, 151, 152], "call": [1, 6, 9, 22, 24, 29, 32, 36, 37, 41, 44, 47, 54, 55, 67, 70, 71, 75, 77, 82, 84, 88, 89, 91, 92, 97, 98, 101, 103, 104, 106, 108, 109, 115, 116, 118, 119, 123, 124, 126, 127, 136, 140, 142, 144, 146, 148, 150, 151, 152, 158, 164, 167], "_plotindex": [1, 47, 118], "These": [1, 4, 5, 12, 16, 18, 19, 20, 25, 30, 31, 32, 34, 36, 41, 45, 47, 52, 55, 58, 63, 64, 67, 70, 71, 78, 82, 84, 88, 93, 96, 97, 98, 100, 106, 108, 112, 114, 115, 116, 118, 119, 125, 126, 127, 128, 132, 135, 136, 137, 139, 149, 153, 158, 159, 162, 166, 170], "new_plotfigur": [1, 2, 47, 55, 82, 147], "figno": [1, 2, 47, 55, 82, 84, 118, 147], "getfram": [1, 3, 84], "frameno": [1, 3, 29, 37], "clawsolut": 1, "solut": [1, 3, 4, 5, 16, 18, 19, 24, 27, 29, 31, 36, 37, 39, 47, 49, 51, 64, 71, 75, 77, 81, 84, 89, 91, 94, 96, 97, 98, 101, 102, 104, 106, 107, 108, 115, 116, 123, 124, 128, 135, 139, 140, 147, 148, 149, 150, 152, 160, 167, 170], "read": [1, 4, 5, 7, 19, 30, 32, 34, 35, 37, 38, 39, 47, 48, 49, 52, 53, 57, 62, 63, 64, 67, 70, 71, 75, 77, 81, 89, 91, 97, 98, 103, 109, 124, 125, 127, 128, 133, 135, 136, 150, 151, 152, 158, 162, 164, 167, 168], "fort": [1, 8, 29, 34, 36, 47, 71, 81, 97, 103, 120, 124, 125, 126, 135, 139, 148, 149, 150, 152, 161, 168], "q000n": [1, 8], "n": [1, 6, 16, 17, 19, 32, 34, 47, 51, 68, 84, 99, 105, 116, 118, 127, 142, 148, 151, 167, 170], "find": [1, 3, 4, 6, 12, 19, 26, 29, 30, 31, 32, 51, 55, 62, 66, 75, 78, 81, 86, 93, 101, 106, 107, 109, 111, 113, 127, 158, 165], "onc": [1, 5, 13, 24, 30, 31, 38, 39, 55, 59, 60, 61, 62, 70, 71, 75, 77, 84, 88, 98, 99, 100, 101, 106, 109, 125, 127, 133], "framesoln_dict": 1, "It": [1, 4, 6, 12, 19, 22, 24, 30, 31, 34, 36, 47, 49, 52, 53, 55, 57, 58, 63, 67, 75, 81, 82, 88, 91, 94, 97, 98, 99, 104, 108, 111, 115, 116, 120, 125, 135, 139, 142, 143, 144, 148, 149, 151, 162, 164, 165, 166, 167], "q": [1, 3, 5, 6, 16, 19, 22, 24, 29, 36, 37, 47, 71, 77, 81, 84, 88, 89, 94, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 108, 115, 120, 123, 125, 141, 148, 149, 150, 152, 162, 167, 168, 170], "onli": [1, 3, 5, 6, 8, 12, 13, 16, 18, 19, 21, 24, 29, 30, 32, 34, 36, 37, 41, 42, 45, 46, 47, 49, 52, 55, 58, 59, 60, 62, 63, 64, 67, 68, 71, 72, 75, 76, 77, 78, 82, 88, 91, 94, 97, 98, 99, 101, 103, 104, 105, 106, 108, 109, 110, 113, 115, 118, 119, 124, 125, 126, 127, 130, 132, 135, 139, 140, 141, 142, 143, 144, 146, 147, 148, 149, 150, 151, 152, 154, 158, 162, 164, 165, 166, 167, 170], "separ": [1, 30, 34, 36, 46, 55, 58, 63, 67, 72, 96, 104, 109, 142, 164], "clearfram": [1, 84], "remov": [1, 3, 22, 31, 36, 43, 56, 58, 62, 63, 66, 84, 99, 111, 118, 119, 122, 123, 135, 137, 144, 151, 164, 165], "more": [1, 2, 3, 4, 5, 7, 10, 12, 13, 14, 16, 17, 18, 19, 22, 24, 26, 28, 30, 31, 32, 34, 36, 38, 41, 47, 48, 49, 50, 52, 55, 57, 58, 59, 61, 62, 63, 64, 65, 66, 70, 71, 72, 75, 81, 82, 83, 84, 85, 86, 89, 91, 92, 94, 96, 97, 98, 99, 100, 101, 102, 104, 105, 106, 108, 109, 111, 114, 115, 116, 118, 119, 120, 123, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 140, 142, 143, 144, 146, 147, 148, 149, 150, 151, 153, 154, 158, 160, 161, 162, 164, 165, 166, 167, 170], "yet": [1, 13, 18, 22, 27, 52, 56, 58, 61, 63, 81, 104, 118, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 140, 148, 150, 169], "clearfigur": 1, "clear": [1, 2, 6, 71, 84, 135], "paramet": [1, 6, 7, 9, 16, 18, 19, 22, 27, 29, 32, 34, 35, 36, 38, 39, 42, 43, 45, 48, 49, 50, 52, 55, 57, 66, 67, 68, 71, 75, 76, 77, 81, 87, 88, 91, 92, 97, 98, 100, 102, 103, 106, 109, 112, 115, 119, 125, 130, 132, 135, 137, 139, 140, 141, 143, 144, 150, 152, 154, 159, 162, 164, 165, 167], "first": [1, 3, 5, 13, 14, 19, 21, 22, 24, 30, 32, 34, 36, 37, 38, 39, 40, 41, 42, 55, 58, 59, 62, 63, 66, 70, 71, 82, 84, 88, 89, 94, 97, 98, 99, 101, 104, 105, 106, 108, 109, 111, 113, 115, 119, 123, 128, 136, 140, 141, 142, 144, 148, 150, 151, 158, 160, 162, 164, 170], "sure": [1, 19, 22, 30, 43, 58, 59, 60, 61, 62, 71, 78, 88, 97, 99, 101, 103, 107, 109, 143, 164, 165, 166], "previou": [1, 30, 31, 47, 57, 59, 61, 62, 67, 70, 71, 84, 88, 104, 113, 119, 124, 125, 126, 127, 132, 139, 144, 148, 149, 150, 152, 162, 164], "chang": [1, 6, 8, 13, 15, 16, 18, 19, 21, 22, 27, 30, 31, 32, 34, 36, 43, 44, 49, 54, 55, 56, 57, 58, 59, 62, 63, 66, 67, 68, 70, 71, 76, 77, 78, 81, 84, 88, 89, 95, 97, 98, 106, 109, 110, 113, 114, 115, 116, 138, 140, 144, 145, 148, 149, 150, 151, 152, 154, 156, 157, 162, 165, 167], "re": [1, 17, 30, 43, 47, 66, 71, 78, 82, 84, 88, 105, 115, 116, 129, 165], "session": [1, 38, 39, 40, 100, 105], "iplotclaw": [1, 13, 24, 38, 39, 47, 50, 81, 82, 100, 111], "being": [1, 3, 4, 8, 13, 18, 19, 34, 42, 47, 49, 52, 57, 62, 70, 72, 84, 91, 97, 102, 103, 104, 109, 111, 113, 115, 118, 124, 126, 128, 137, 140, 142, 144, 148, 151, 165, 167], "getfigur": 1, "fignam": [1, 84], "getax": 1, "axesnam": [1, 84], "clawplotax": [1, 2, 3, 29, 82, 127, 132, 136, 147], "search": [1, 13, 14, 17, 62, 81, 96, 109, 111, 125, 127, 142, 146], "over": [1, 3, 5, 6, 13, 16, 17, 24, 30, 32, 34, 36, 41, 42, 47, 48, 49, 50, 52, 55, 57, 63, 64, 70, 71, 72, 75, 81, 97, 98, 104, 115, 118, 119, 120, 128, 130, 140, 142, 144, 147, 149, 150, 151, 161, 162, 167, 170], "found": [1, 4, 5, 6, 11, 12, 13, 16, 19, 24, 26, 29, 31, 34, 37, 38, 39, 43, 45, 47, 49, 51, 52, 54, 58, 63, 66, 67, 72, 80, 82, 83, 84, 88, 92, 99, 103, 107, 109, 111, 113, 116, 124, 127, 139, 143, 147, 154, 158, 164, 165], "uniqu": [1, 77, 118, 124, 158], "getitem": 1, "itemnam": [1, 84], "showitem": 1, "plotfram": 1, "number": [1, 2, 3, 4, 6, 8, 12, 16, 17, 19, 21, 24, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 46, 47, 49, 55, 58, 63, 66, 71, 76, 77, 78, 84, 88, 89, 91, 92, 93, 94, 96, 97, 98, 99, 101, 103, 104, 106, 108, 109, 110, 113, 115, 116, 118, 119, 120, 122, 123, 124, 125, 126, 127, 129, 136, 139, 140, 142, 148, 149, 150, 151, 152, 158, 159, 160, 164, 167], "conveni": [1, 29, 34, 36, 38, 39, 42, 47, 55, 84, 91, 93, 96, 98, 100, 108, 167, 170], "pyclaw": [1, 3, 4, 12, 17, 25, 26, 29, 30, 31, 46, 47, 59, 60, 61, 77, 78, 84, 85, 95, 99, 101, 107, 111, 138, 140, 141, 146], "plotter": [1, 3, 29, 84], "frametool": [1, 29, 84, 118, 130], "printfram": [1, 81], "still": [1, 5, 7, 8, 13, 16, 18, 19, 24, 26, 28, 34, 42, 45, 47, 49, 55, 56, 67, 70, 71, 77, 81, 86, 97, 104, 110, 115, 116, 118, 123, 124, 125, 126, 127, 128, 130, 135, 137, 139, 140, 151, 158], "clawplotdata": [2, 3, 29, 47, 55, 82, 84, 91, 147], "next": [2, 3, 6, 13, 20, 36, 38, 40, 47, 58, 71, 77, 82, 84, 87, 88, 96, 97, 99, 104, 108, 113, 115, 116, 118, 135, 136, 137, 148, 149, 151], "unus": [2, 97], "1001": 2, "figsiz": [2, 42, 70, 82, 136, 142, 147], "tupl": [2, 3, 32, 51, 63, 75, 82, 94, 97, 98, 164], "size": [2, 22, 32, 36, 37, 42, 47, 55, 63, 76, 77, 81, 94, 97, 99, 104, 125, 130, 135, 149, 150, 152, 154, 162, 164], "facecolor": [2, 82, 118, 136, 147], "background": [2, 81, 127, 147], "behind": [2, 42, 70, 144, 151], "By": [2, 15, 32, 44, 49, 51, 55, 57, 63, 75, 82, 84, 88, 94, 98, 100, 107, 127, 142, 145, 156, 157, 164, 170], "theme": 2, "tan": [2, 82], "public": [2, 4, 13, 17, 23, 138], "probabl": [2, 13, 30, 55, 68, 70, 110, 111], "w": [2, 17, 51, 140, 170], "white": [2, 63, 118], "keyword": [2, 3, 82, 88, 93, 94, 97, 103, 109, 116, 127, 147, 158, 164], "12": [2, 34, 42, 55, 70, 82, 142, 147], "5": [2, 4, 5, 8, 9, 11, 13, 18, 19, 21, 27, 32, 34, 35, 36, 37, 41, 42, 45, 47, 49, 51, 55, 56, 57, 58, 59, 63, 64, 66, 67, 68, 70, 75, 82, 92, 94, 98, 99, 101, 102, 104, 110, 111, 115, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 148, 149, 150, 151, 152, 158, 161, 162, 164, 169], "would": [2, 3, 12, 13, 16, 26, 29, 30, 34, 36, 41, 44, 55, 57, 59, 62, 64, 66, 67, 70, 72, 75, 77, 82, 86, 88, 91, 94, 98, 109, 116, 125, 142, 143, 144, 147, 148, 151, 158, 162, 167], "inch": [2, 55, 63, 82, 147], "red": [2, 3, 30, 47, 63, 82, 116, 147], "option": [2, 12, 13, 16, 19, 22, 24, 27, 30, 31, 32, 34, 36, 37, 38, 39, 43, 44, 51, 54, 57, 60, 62, 66, 71, 77, 81, 82, 88, 89, 91, 93, 94, 95, 97, 98, 100, 103, 104, 105, 108, 109, 111, 112, 115, 116, 118, 120, 123, 124, 125, 128, 130, 133, 135, 137, 142, 146, 147, 148, 150, 151, 152, 153, 158, 164], "clf_each_fram": 2, "clf": 2, "axes1": [2, 84], "shown": [3, 13, 18, 19, 58, 63, 67, 68, 71, 78, 98, 118, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 142, 164, 167], "fragment": 3, "typic": [3, 22, 42, 66, 67, 71, 72, 75, 77, 78, 84, 89, 99, 101, 104, 106, 115, 149, 150, 161, 162, 165, 166, 167, 170], "assum": [3, 5, 22, 24, 32, 34, 36, 37, 39, 42, 49, 51, 52, 55, 57, 58, 59, 63, 71, 75, 81, 97, 98, 100, 101, 102, 108, 109, 115, 123, 136, 142, 143, 148, 151, 158, 159, 162, 164, 166, 170], "instanc": [3, 30, 37, 55, 75, 78, 84, 88, 89, 91, 94, 97, 98, 101, 142, 151], "type": [3, 4, 7, 13, 17, 18, 22, 30, 32, 38, 39, 43, 47, 48, 55, 66, 71, 82, 83, 84, 88, 89, 90, 92, 94, 97, 99, 100, 104, 105, 108, 109, 142, 149, 150, 151, 158, 159, 162, 164, 170], "dimension": [3, 7, 8, 17, 19, 24, 27, 32, 34, 36, 38, 39, 47, 49, 52, 56, 71, 94, 101, 123, 124, 126, 129, 150, 151, 152, 164, 167], "point": [3, 5, 6, 13, 15, 16, 17, 22, 30, 32, 35, 36, 38, 39, 41, 42, 44, 47, 48, 49, 50, 51, 52, 55, 57, 58, 59, 61, 62, 63, 64, 71, 72, 75, 88, 98, 99, 103, 109, 110, 111, 115, 118, 126, 128, 130, 136, 139, 140, 142, 143, 144, 145, 146, 148, 149, 150, 151, 156, 157, 158, 162, 164, 165, 167], "slice": [3, 49, 71, 140], "scatter": [3, 24, 71], "radial": [3, 18, 34, 49, 51, 151, 167], "symmetr": [3, 49, 51, 167], "between": [3, 4, 5, 6, 13, 16, 25, 27, 30, 32, 33, 34, 36, 37, 41, 51, 55, 59, 63, 70, 71, 72, 75, 76, 78, 81, 91, 94, 98, 104, 106, 107, 109, 110, 111, 115, 118, 124, 125, 140, 142, 143, 148, 149, 150, 151, 152, 153, 154, 161, 162, 164, 166, 167], "plot_var": [3, 29, 47, 55, 82, 83], "fill_var2": 3, "diment": 3, "raster": [3, 55, 57, 135, 162], "contour": [3, 32, 47, 55, 57, 71, 110, 147, 164], "pcolor": [3, 47, 81, 110, 118, 135, 164], "2d_schlieren": 3, "schlieren": [3, 71], "2d_patch": [3, 24], "cell": [3, 4, 5, 7, 8, 15, 16, 18, 19, 22, 24, 27, 29, 34, 35, 36, 37, 47, 48, 49, 55, 57, 63, 70, 71, 72, 76, 77, 78, 88, 94, 97, 99, 102, 104, 106, 108, 115, 119, 120, 124, 125, 126, 127, 128, 129, 130, 132, 136, 140, 143, 144, 145, 148, 149, 150, 152, 154, 159, 161, 162, 167, 170], "patch": [3, 6, 7, 16, 19, 24, 29, 34, 42, 55, 71, 75, 76, 77, 81, 82, 97, 99, 103, 106, 115, 125, 127, 130, 132, 144, 147, 149, 161, 162, 167], "edg": [3, 6, 15, 16, 19, 29, 32, 34, 35, 36, 37, 41, 49, 63, 75, 94, 102, 140, 142, 145, 149, 150, 152, 167], "hillshad": [3, 118], "come": [3, 30, 82, 84, 93, 99, 104, 123, 162, 167], "parent": [3, 29, 94, 106, 109], "integ": [3, 34, 35, 36, 47, 55, 63, 68, 70, 82, 89, 97, 103, 115, 118, 126, 129, 140, 148, 151, 158, 164], "compon": [3, 16, 19, 22, 24, 27, 39, 47, 61, 62, 71, 77, 81, 101, 103, 105, 106, 115, 123, 132, 141, 148, 149, 150, 162, 167], "correspond": [3, 6, 12, 25, 27, 29, 32, 35, 36, 37, 47, 49, 51, 52, 57, 58, 59, 63, 71, 75, 82, 88, 92, 94, 97, 98, 101, 103, 106, 115, 116, 140, 142, 143, 148, 149, 150, 151, 152, 158, 162, 166, 167], "appli": [3, 4, 5, 6, 13, 16, 17, 19, 27, 32, 52, 55, 57, 68, 70, 75, 82, 84, 92, 94, 97, 104, 115, 139, 148, 151, 167], "comput": [3, 4, 5, 6, 13, 16, 17, 18, 19, 29, 31, 32, 34, 35, 36, 37, 42, 47, 49, 51, 55, 57, 62, 63, 64, 66, 72, 75, 81, 82, 84, 89, 91, 94, 96, 97, 98, 99, 104, 108, 111, 113, 115, 118, 119, 120, 124, 125, 129, 132, 135, 137, 140, 144, 148, 150, 151, 152, 159, 162, 167, 170], "signatur": [3, 89, 92, 94, 95, 97, 102, 158], "hold": [3, 37, 84, 108, 115], "current": [3, 5, 13, 14, 19, 22, 24, 26, 29, 30, 31, 32, 34, 37, 41, 42, 44, 47, 48, 49, 52, 57, 58, 59, 61, 62, 63, 64, 71, 73, 77, 82, 84, 94, 97, 98, 99, 104, 106, 109, 111, 115, 116, 118, 124, 126, 127, 137, 139, 143, 147, 148, 149, 150, 151, 152, 154, 158, 159, 162, 164, 166], "afteritem": [3, 29], "afterpatch": [3, 29], "There": [3, 6, 13, 24, 36, 39, 43, 55, 58, 59, 66, 70, 75, 77, 84, 85, 98, 105, 113, 126, 127, 147, 148, 154, 159, 160, 167, 169], "calcul": [3, 5, 6, 18, 19, 29, 32, 35, 37, 48, 51, 71, 75, 82, 94, 102, 104, 118, 120, 125, 164], "cd": [3, 13, 30, 38, 39, 40, 56, 58, 59, 61, 62, 84, 93, 96, 99, 105, 116, 160], "On": [3, 5, 13, 55, 76, 85, 126, 136, 142, 146, 167], "ylower": [3, 24, 29, 42, 89, 127, 150, 162, 164], "patchno": [3, 29], "out": [3, 16, 17, 26, 28, 31, 32, 34, 36, 37, 38, 39, 42, 47, 48, 49, 54, 56, 57, 58, 59, 62, 63, 64, 65, 66, 71, 75, 82, 85, 86, 88, 89, 91, 97, 98, 99, 100, 103, 108, 110, 111, 113, 116, 125, 127, 129, 130, 140, 142, 149, 150, 152, 158, 164, 165], "lower": [3, 24, 32, 34, 35, 41, 49, 57, 70, 77, 94, 99, 142, 144, 148, 150, 152, 162, 164, 166], "left": [3, 5, 10, 13, 16, 20, 27, 29, 32, 34, 57, 77, 84, 94, 101, 102, 108, 118, 126, 132, 135, 136, 137, 138, 139, 140, 143, 149, 162, 164, 166, 170], "mappedgrid": [3, 71], "map": [3, 16, 18, 31, 32, 42, 48, 63, 70, 71, 82, 86, 89, 94, 96, 101, 115, 123, 127, 132, 141, 164, 170], "mapc2p": [3, 27, 29, 49, 71, 89, 94, 132], "underli": [3, 55, 125], "requir": [3, 4, 16, 18, 19, 22, 24, 27, 29, 30, 32, 34, 36, 37, 38, 39, 43, 48, 49, 51, 52, 59, 62, 70, 71, 75, 78, 81, 84, 85, 88, 89, 94, 97, 100, 101, 104, 105, 106, 108, 109, 110, 115, 116, 118, 119, 120, 123, 125, 128, 130, 132, 135, 137, 140, 141, 142, 147, 148, 149, 150, 151, 152, 158, 159, 162, 165, 168, 170], "depend": [3, 13, 16, 30, 31, 32, 34, 37, 38, 39, 43, 44, 50, 52, 55, 66, 68, 71, 75, 82, 87, 97, 102, 103, 104, 109, 111, 115, 127, 144, 149, 151, 164, 165, 167, 170], "summar": [3, 30, 33, 115, 117, 167], "plotstyl": [3, 47, 82, 147], "anyth": [3, 6, 30, 31, 62, 67, 116, 127], "valid": [3, 52, 75, 91, 98, 103, 106, 125, 151, 158, 159, 164], "fmt": 3, "group": [3, 13, 26, 30, 32, 52, 93, 97, 99, 107, 124, 140], "solid": [3, 16, 55, 75, 101, 147, 148, 150, 152], "dash": [3, 99], "o": [3, 5, 17, 41, 42, 43, 70, 72, 82, 85, 86, 89, 97, 98, 107, 127, 150, 164, 167], "circl": [3, 51, 82, 118], "bo": 3, "blue": [3, 11, 42, 47, 63, 70, 82, 142, 164], "though": [3, 42, 78, 158, 162], "also": [3, 4, 5, 6, 7, 8, 9, 11, 12, 16, 17, 18, 19, 20, 22, 24, 25, 26, 27, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 44, 45, 46, 47, 48, 49, 51, 52, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 66, 67, 70, 71, 75, 76, 77, 78, 81, 82, 84, 88, 90, 91, 94, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 118, 119, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 146, 148, 149, 150, 151, 152, 153, 156, 157, 158, 159, 160, 161, 162, 164, 165, 166, 167, 169, 170], "overrul": 3, "r": [3, 4, 6, 17, 30, 47, 51, 56, 58, 70, 71, 74, 82, 88, 92, 99, 101, 118, 140, 142, 147, 164, 170], "ff0000": [3, 63], "No": [3, 43, 55, 59, 71, 94, 104, 133, 140, 148, 151, 165], "extra": [3, 55, 141], "give": [3, 6, 9, 10, 13, 16, 17, 18, 19, 26, 30, 32, 34, 35, 36, 38, 39, 47, 49, 56, 63, 64, 70, 72, 75, 76, 77, 82, 84, 99, 100, 104, 116, 120, 124, 125, 129, 132, 142, 148, 151, 162, 164, 166], "polygon": [3, 7, 41, 55, 63, 130, 164], "curv": [3, 47, 81, 142], "fill_between": 3, "plot_var2": 3, "zero": [3, 16, 32, 34, 42, 44, 47, 63, 71, 72, 88, 101, 102, 106, 108, 132, 142, 143], "fill_wher": 3, "plotitem": [3, 29, 47, 82, 147], "mean": [3, 13, 24, 30, 34, 42, 47, 52, 56, 62, 71, 72, 98, 99, 115, 118, 140, 143, 148, 150, 152, 166], "map_2d_to_1d": 3, "In": [3, 5, 6, 8, 11, 12, 15, 16, 18, 19, 21, 22, 24, 29, 32, 34, 36, 41, 44, 47, 48, 49, 52, 55, 56, 57, 58, 59, 62, 63, 64, 66, 67, 70, 71, 72, 74, 75, 77, 78, 82, 83, 84, 88, 89, 94, 96, 97, 98, 99, 100, 101, 102, 104, 106, 109, 111, 112, 113, 115, 118, 119, 120, 123, 124, 125, 127, 128, 132, 136, 139, 140, 142, 144, 145, 146, 148, 149, 151, 156, 157, 162, 164, 165, 167, 170], "about": [3, 5, 7, 13, 14, 16, 18, 19, 24, 27, 35, 36, 37, 38, 39, 43, 49, 51, 52, 57, 59, 63, 66, 68, 71, 77, 83, 85, 88, 96, 97, 99, 104, 111, 116, 124, 128, 130, 135, 136, 140, 147, 149, 150, 151, 162, 165, 167, 170], "j": [3, 4, 5, 15, 17, 22, 24, 29, 35, 42, 56, 63, 70, 71, 77, 84, 96, 97, 115, 119, 120, 144, 145], "v": [3, 16, 27, 31, 32, 34, 36, 37, 51, 64, 67, 116, 124, 149, 162], "radiu": [3, 151, 158, 159, 164], "q0_vs_radiu": 3, "convert": [3, 24, 27, 32, 35, 37, 45, 51, 55, 62, 63, 66, 75, 78, 89, 96, 101, 109, 110, 127, 130, 136, 137, 148, 149, 158, 162, 166], "numpi": [3, 13, 32, 34, 36, 37, 42, 51, 70, 85, 87, 88, 89, 91, 94, 101, 106, 107, 108, 110, 116, 137, 141, 142, 150, 164, 165], "sqrt": [3, 34, 37, 49, 68, 88, 101, 102, 108, 150], "q0": [3, 101], "work": [3, 5, 8, 13, 16, 19, 21, 22, 24, 26, 27, 28, 30, 31, 34, 36, 38, 39, 43, 48, 52, 55, 56, 57, 58, 59, 60, 61, 62, 63, 70, 71, 74, 75, 76, 82, 85, 86, 87, 88, 90, 91, 92, 96, 97, 98, 99, 102, 104, 105, 110, 111, 113, 114, 115, 116, 118, 121, 122, 123, 124, 125, 126, 127, 130, 132, 133, 138, 140, 146, 147, 148, 149, 153, 159, 162, 165, 169], "symbol": [3, 71, 111], "best": [3, 4, 16, 24, 28, 30, 36, 44, 49, 55, 57, 59, 60, 66, 72, 74, 76, 81, 82, 97, 101, 113, 114, 115, 116, 127, 138, 140, 151, 155, 158, 162, 167], "descript": [3, 4, 6, 9, 24, 25, 27, 32, 36, 37, 63, 71, 75, 78, 81, 96, 97, 109, 113, 115, 137, 140, 141, 151, 158, 162, 170], "celledges_show": [3, 24], "draw": 3, "amr_celledges_show": 3, "level": [3, 6, 7, 16, 19, 25, 29, 31, 34, 36, 41, 42, 47, 48, 50, 51, 52, 55, 58, 59, 61, 62, 71, 72, 76, 77, 89, 91, 94, 96, 97, 98, 104, 111, 112, 115, 116, 119, 120, 124, 125, 127, 130, 139, 142, 143, 146, 148, 149, 150, 152, 161, 162, 164, 166, 167], "patchedges_show": [3, 24], "mostli": [3, 81, 96, 130, 137], "contour_level": [3, 164], "three": [3, 13, 17, 24, 32, 34, 37, 52, 55, 67, 71, 75, 99, 103, 109, 116, 142, 148, 151, 162, 164, 167], "contour_nlevel": 3, "contour_min": 3, "minimum": [3, 19, 34, 47, 55, 75, 108, 125, 151, 164], "contour_max": 3, "maximum": [3, 24, 32, 34, 35, 36, 48, 71, 72, 104, 108, 115, 119, 120, 127, 130, 148, 149, 150, 152, 158, 159], "contour_color": 3, "specif": [3, 5, 12, 19, 24, 30, 32, 47, 48, 49, 51, 55, 56, 62, 65, 67, 68, 77, 86, 87, 89, 91, 96, 97, 98, 102, 103, 109, 113, 125, 126, 127, 130, 147, 148, 149, 150, 152, 159, 162], "b": [3, 5, 17, 30, 32, 34, 35, 36, 37, 42, 47, 49, 56, 58, 59, 68, 72, 82, 104, 115, 123, 130, 142, 143, 144, 151, 164, 166], "0000ff": [3, 63], "colormap": [3, 32, 42, 50, 55, 70, 71, 81, 83, 124, 130, 164], "amr_contour_color": 3, "As": [3, 18, 19, 39, 42, 48, 49, 52, 58, 59, 63, 64, 88, 108, 110, 114, 118, 119, 130, 140, 141, 144, 151, 154, 160, 167], "black": [3, 47], "subsequ": [3, 10, 71], "both": [3, 16, 18, 19, 30, 32, 35, 36, 37, 38, 39, 41, 42, 47, 52, 57, 60, 62, 67, 70, 71, 75, 77, 89, 97, 98, 99, 104, 105, 115, 116, 123, 124, 127, 130, 135, 140, 141, 142, 144, 148, 149, 150, 152, 156, 162, 167], "fine": [3, 19, 34, 35, 36, 42, 49, 58, 74, 78, 96, 101, 115, 118, 125, 132, 142, 144, 148, 149, 151, 162, 167], "coars": [3, 34, 36, 55, 115, 118, 125, 132, 148, 162, 167], "anoth": [3, 19, 24, 34, 36, 42, 47, 51, 55, 62, 63, 77, 81, 85, 93, 104, 107, 116, 127, 158, 167], "refin": [3, 4, 5, 7, 8, 17, 19, 24, 36, 48, 49, 52, 55, 56, 57, 70, 71, 77, 78, 88, 125, 127, 128, 130, 132, 142, 144, 147, 148, 149, 150, 161, 162, 167], "region": [3, 6, 7, 13, 16, 19, 24, 34, 36, 41, 42, 48, 52, 53, 55, 63, 68, 72, 75, 78, 113, 118, 127, 130, 132, 143, 144, 149, 150, 154, 162, 164], "lack": 3, "hidden": [3, 66, 82], "blank": [3, 35, 63, 158], "coarser": [3, 16, 19, 57, 125, 144, 148, 149, 167], "easili": [3, 13, 30, 34, 55, 58, 71, 82, 89, 94, 105, 109, 116, 118, 130, 153], "contour_show": 3, "commonli": [3, 19, 71, 82, 84], "amr_contour_show": 3, "determin": [3, 5, 6, 32, 34, 37, 42, 47, 48, 49, 52, 54, 55, 58, 63, 72, 75, 82, 92, 94, 97, 102, 106, 111, 115, 120, 124, 125, 139, 142, 143, 147, 148, 149, 151, 164, 167], "whether": [3, 6, 13, 16, 24, 51, 57, 60, 62, 64, 65, 66, 71, 86, 94, 97, 98, 102, 103, 104, 115, 116, 125, 140, 142, 148, 149, 151, 164], "view": [3, 4, 24, 36, 38, 39, 47, 48, 49, 51, 55, 57, 58, 63, 77, 81, 83, 84, 88, 99, 105, 110, 123, 127, 153, 155], "finest": [3, 19, 34, 36, 42, 47, 72, 127, 161, 164], "contour_kwarg": [3, 164], "pcolor_cmap": [3, 55], "pcolor_cmin": 3, "pcolor_cmax": 3, "thei": [3, 5, 6, 13, 16, 18, 19, 26, 29, 30, 32, 34, 36, 41, 42, 45, 47, 49, 52, 55, 58, 59, 62, 63, 64, 67, 70, 71, 77, 81, 94, 96, 101, 104, 109, 115, 116, 125, 132, 144, 147, 151, 154, 158, 162, 164, 167], "chosen": [3, 31, 34, 41, 42, 49, 55, 57, 70, 108, 115, 132, 143, 149], "vari": [3, 15, 17, 27, 32, 42, 48, 49, 57, 68, 72, 101, 103, 123, 130, 140, 141, 143, 145, 149, 151, 170], "yield": [3, 18, 19], "veri": [3, 5, 16, 17, 18, 19, 24, 49, 52, 55, 59, 60, 63, 75, 82, 86, 89, 97, 98, 99, 100, 101, 104, 116, 118, 120, 124, 135, 142, 144, 148, 159, 162], "confus": [3, 57, 62, 111, 132, 140], "add_colorbar": [3, 32, 164], "ad": [3, 12, 16, 22, 24, 26, 27, 29, 31, 34, 36, 37, 44, 47, 51, 57, 58, 59, 62, 63, 64, 68, 71, 72, 75, 82, 87, 89, 92, 94, 95, 98, 99, 111, 112, 113, 115, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 133, 135, 136, 137, 139, 144, 148, 149, 151, 154, 158, 161, 164, 168], "imshow_cmap": 3, "imshow_cmin": 3, "imshow_cmax": 3, "hillshade_vertical_exagger": 3, "vertic": [3, 32, 41, 52, 55, 63, 70, 142, 143, 151, 164, 166], "exagger": 3, "calul": 3, "hillshade_azimuth_degre": 3, "light": [3, 55, 71, 115], "sourc": [3, 4, 17, 18, 19, 25, 27, 30, 32, 44, 48, 49, 55, 56, 58, 59, 61, 62, 63, 65, 67, 68, 81, 86, 89, 93, 94, 95, 104, 105, 107, 108, 109, 113, 114, 116, 118, 125, 126, 127, 136, 137, 141, 143, 148, 150, 151, 152, 155, 156, 157, 158, 162], "azimuth": 3, "angl": [3, 16, 32, 51, 75], "315": 3, "northwest": 3, "360": [3, 51, 55, 75], "degre": [3, 32, 49, 51, 55, 63, 72, 75], "clockwis": [3, 34, 51, 75, 164], "north": [3, 34, 42, 49, 51, 70, 75], "recommend": [3, 4, 18, 19, 32, 34, 36, 38, 39, 58, 59, 60, 62, 76, 81, 90, 94, 96, 97, 99, 100, 104, 105, 107, 108, 115, 127, 135, 137, 148, 150, 152, 168], "proper": [3, 6, 15, 42, 47, 56, 57, 58, 59, 63, 68, 70, 71, 97, 109, 119, 125, 145, 149, 150, 156, 157, 158, 167], "interpret": [3, 32, 57, 75, 97, 127, 162], "peopl": [3, 4, 12, 13, 86], "hillshade_altitude_degre": 3, "altitud": 3, "horizon": 3, "45": [3, 104], "90": [3, 27, 32, 49, 55, 67, 75, 105, 107, 136], "hillshade_latlon": 3, "correct": [3, 18, 19, 22, 30, 44, 58, 59, 67, 68, 71, 82, 88, 94, 97, 99, 103, 109, 119, 120, 124, 144, 148, 150, 151, 152], "unit": [3, 32, 49, 50, 51, 56, 75, 94, 125, 136, 158], "z": [3, 42, 57, 63, 70, 71, 88, 94, 102, 108, 142, 148, 149, 162, 164], "111200": 3, "reflect": [3, 4, 5, 16, 30, 115, 127, 148, 150, 152], "relat": [3, 7, 19, 24, 26, 58, 78, 102, 113, 126, 130, 132, 143], "pre": [3, 13, 35, 59, 90, 97], "pend": 3, "amr_": [3, 7], "whose": [3, 49, 82, 89, 101, 102, 144, 148, 149, 164], "origin": [3, 6, 13, 16, 18, 19, 22, 30, 32, 36, 37, 45, 47, 56, 58, 63, 70, 76, 77, 89, 104, 109, 119, 125, 132, 139, 149, 150, 151, 152, 164], "hand": [3, 5, 19, 20, 21, 22, 68, 88, 116, 118, 135, 136, 137, 142], "higher": [3, 6, 18, 19, 55, 94, 104, 105, 115, 130, 140, 142, 143, 144], "shorter": [3, 115, 164], "last": [3, 20, 29, 34, 36, 59, 61, 82, 88, 89, 101, 108, 118, 124, 135, 136, 137, 148, 158], "repeatedli": [3, 99, 105, 149], "finer": [3, 7, 19, 34, 55, 115, 119, 120, 142, 148, 149], "celledg": [3, 32, 49], "colorbar_shrink": [3, 32], "colorbar_label": 3, "colorbar_tick": 3, "colorbar_tick_label": 3, "colorbar_extend": [3, 136], "colorbar_kwarg": [3, 127], "stand": [4, 132], "conserv": [4, 5, 6, 17, 18, 19, 98, 104, 106, 128, 141, 167, 170], "law": [4, 17, 63, 151, 170], "packag": [4, 27, 30, 31, 38, 39, 55, 59, 60, 67, 77, 78, 81, 85, 86, 88, 94, 96, 98, 100, 101, 103, 105, 108, 110, 111, 118, 129, 130, 165, 168], "wa": [4, 5, 6, 14, 19, 21, 22, 27, 31, 32, 34, 35, 36, 37, 42, 49, 52, 54, 58, 59, 66, 68, 70, 71, 75, 82, 99, 103, 104, 106, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 139, 142, 144, 161, 162, 164], "initi": [4, 5, 7, 12, 13, 18, 19, 24, 27, 32, 36, 37, 47, 48, 49, 51, 52, 55, 59, 64, 67, 71, 72, 75, 77, 78, 84, 86, 87, 88, 89, 91, 92, 94, 95, 97, 98, 102, 103, 104, 106, 107, 109, 112, 115, 124, 127, 130, 132, 140, 143, 148, 149, 150, 152, 154, 158, 162, 164], "develop": [4, 6, 7, 12, 13, 19, 20, 24, 25, 45, 52, 56, 58, 61, 62, 65, 70, 71, 81, 85, 86, 89, 96, 101, 104, 105, 111, 113, 116, 118, 127, 128, 130, 132, 135, 136, 137, 140, 143, 144, 150], "linear": [4, 5, 17, 18, 19, 32, 36, 37, 47, 49, 55, 72, 75, 82, 88, 92, 104, 118, 128, 140, 141, 142], "nonlinear": [4, 5, 17, 52, 92, 140, 148, 170], "hyperbol": [4, 5, 6, 17, 18, 19, 45, 78, 89, 96, 101, 102, 108, 140, 148, 151, 167, 170], "system": [4, 16, 17, 18, 19, 25, 39, 40, 48, 55, 56, 62, 63, 67, 76, 77, 86, 96, 97, 98, 99, 101, 102, 105, 108, 111, 116, 118, 140, 148, 150, 152, 160, 167, 170], "focu": [4, 48], "high": [4, 17, 34, 52, 55, 70, 72, 75, 78, 89, 96, 104, 140, 143, 144, 166, 167], "resolut": [4, 6, 17, 32, 34, 36, 42, 47, 64, 72, 75, 94, 104, 108, 109, 119, 123, 127, 128, 135, 140, 143, 162, 164, 166, 167], "godunov": [4, 94, 104, 148, 150, 152, 167], "method": [4, 5, 7, 17, 19, 34, 36, 37, 41, 45, 47, 57, 70, 72, 82, 84, 88, 91, 92, 94, 99, 103, 104, 109, 115, 116, 123, 140, 147, 148, 149, 150, 152, 158, 161, 162, 164, 167], "framework": [4, 86, 89, 124, 125], "applic": [4, 6, 15, 16, 18, 19, 21, 22, 24, 25, 26, 30, 31, 36, 37, 38, 39, 40, 44, 45, 46, 47, 48, 50, 59, 61, 62, 67, 70, 76, 77, 84, 93, 94, 95, 96, 98, 104, 109, 112, 114, 115, 116, 118, 119, 122, 123, 125, 126, 127, 129, 130, 140, 142, 144, 145, 148, 151, 156, 157, 162, 164, 165, 167, 168], "finit": [4, 17, 34, 36, 45, 49, 57, 63, 70, 71, 72, 75, 104, 130, 142, 151, 161, 162, 167], "volum": [4, 17, 31, 34, 36, 45, 49, 57, 63, 70, 71, 72, 96, 130, 142, 149, 151, 161, 162, 167], "riemann": [4, 5, 8, 22, 24, 25, 30, 31, 48, 59, 62, 67, 78, 86, 88, 94, 95, 104, 105, 106, 108, 111, 146, 148, 150, 152, 156, 157, 170], "solver": [4, 5, 6, 22, 24, 25, 27, 30, 48, 49, 60, 61, 62, 67, 85, 86, 87, 91, 94, 95, 98, 106, 118, 121, 123, 125, 126, 127, 128, 129, 130, 132, 137, 148, 150, 152, 156, 157, 170], "resolv": [4, 34, 36, 55, 58, 62, 113, 127, 144], "jump": [4, 5, 71, 84, 94, 104, 125, 148, 170], "discontinu": [4, 104, 170], "interfac": [4, 21, 24, 71, 86, 89, 92, 96, 97, 102, 104, 109, 140, 167, 168, 170], "wave": [4, 5, 6, 16, 17, 18, 27, 34, 42, 48, 49, 52, 55, 56, 75, 92, 94, 96, 101, 102, 104, 115, 123, 125, 126, 132, 141, 142, 143, 148, 149, 150, 151, 152, 154, 167], "propag": [4, 5, 6, 17, 18, 19, 27, 32, 49, 52, 55, 56, 75, 94, 96, 104, 115, 125, 140], "neighbor": [4, 18, 19, 36, 42, 70, 72, 115, 125, 144, 149, 150, 164], "formul": [4, 5, 19, 52, 68, 140, 148], "allow": [4, 6, 13, 24, 29, 30, 31, 34, 36, 37, 41, 42, 47, 48, 51, 54, 55, 57, 58, 62, 68, 70, 71, 75, 76, 78, 81, 82, 91, 96, 97, 98, 104, 106, 109, 110, 111, 115, 116, 119, 120, 123, 124, 125, 126, 127, 129, 130, 132, 135, 136, 137, 140, 142, 148, 150, 151, 152, 153, 158, 162, 164, 166], "easi": [4, 6, 11, 31, 41, 62, 71, 89, 98, 99, 100, 142, 153, 167], "extens": [4, 17, 19, 24, 26, 30, 32, 52, 55, 58, 62, 67, 71, 89, 96, 97, 109, 125, 126, 132, 148, 160, 164, 170], "problem": [4, 5, 7, 16, 17, 18, 19, 22, 26, 27, 29, 30, 31, 38, 39, 42, 45, 48, 49, 62, 66, 70, 71, 72, 75, 78, 82, 85, 87, 88, 93, 95, 96, 99, 102, 104, 107, 111, 116, 119, 120, 122, 123, 126, 130, 132, 136, 137, 140, 142, 144, 148, 149, 150, 151, 152, 153, 154, 161, 165], "algorithm": [4, 7, 19, 27, 34, 41, 42, 48, 56, 88, 94, 96, 97, 104, 108, 115, 127, 140, 142, 148, 150, 152, 164], "brief": [4, 59, 141, 151], "subroutin": [4, 6, 9, 16, 24, 34, 36, 67, 115, 123, 140, 148, 149, 161, 167, 170], "equat": [4, 5, 16, 17, 18, 27, 38, 39, 48, 49, 52, 64, 68, 82, 87, 88, 89, 91, 96, 97, 98, 101, 104, 105, 106, 118, 120, 123, 125, 127, 128, 140, 148, 150, 151, 152, 154, 162, 167, 170], "solv": [4, 5, 8, 16, 17, 18, 19, 22, 28, 38, 39, 49, 52, 60, 62, 64, 87, 89, 91, 94, 96, 101, 102, 105, 118, 128, 140, 141, 148, 162, 167, 170], "adapt": [4, 7, 17, 19, 32, 42, 49, 56, 57, 70, 71, 78, 88, 115, 127, 130, 132, 140, 142, 147, 148, 149, 151, 167], "mesh": [4, 7, 17, 19, 35, 49, 56, 70, 71, 78, 81, 88, 115, 130, 147, 148, 167], "amrclaw": [4, 5, 6, 12, 15, 16, 19, 21, 22, 24, 25, 26, 30, 38, 39, 41, 42, 44, 46, 47, 48, 50, 56, 59, 60, 61, 62, 64, 70, 71, 76, 77, 78, 85, 96, 97, 105, 111, 112, 115, 116, 139, 140, 142, 145, 146, 148, 151, 156, 157, 160, 161, 165], "detail": [4, 5, 10, 16, 24, 25, 27, 28, 30, 31, 32, 34, 36, 38, 39, 41, 44, 47, 50, 52, 55, 58, 61, 62, 64, 65, 66, 70, 71, 75, 78, 82, 86, 91, 92, 93, 94, 96, 97, 98, 99, 100, 101, 102, 104, 114, 115, 116, 120, 125, 127, 132, 135, 140, 142, 147, 148, 151, 153, 158, 162, 165, 166, 167, 170], "content": [4, 6, 25, 37, 45, 55, 59, 77, 78, 89, 96, 151, 162, 167, 168], "routin": [4, 5, 6, 16, 18, 19, 22, 27, 29, 32, 34, 38, 39, 47, 48, 49, 50, 55, 56, 66, 71, 72, 76, 77, 78, 81, 84, 86, 89, 91, 94, 97, 100, 101, 104, 106, 107, 115, 118, 119, 120, 123, 125, 127, 128, 130, 140, 144, 148, 150, 152, 158, 164, 165, 167, 168, 170], "special": [4, 7, 16, 48, 50, 55, 65, 78, 86, 97, 115, 135, 142, 164], "depth": [4, 5, 16, 17, 18, 19, 24, 32, 34, 35, 37, 42, 47, 48, 49, 52, 68, 72, 75, 81, 83, 141, 143, 144, 151, 162], "averag": [4, 6, 15, 17, 18, 19, 34, 42, 48, 49, 52, 53, 57, 71, 72, 102, 106, 120, 132, 140, 144, 145, 162, 164, 167], "geophys": [4, 16, 17, 25, 48, 52, 78, 148], "flow": [4, 16, 17, 25, 34, 35, 48, 50, 52, 78, 96, 113, 118, 130, 135, 140, 148, 151, 162, 167], "geoclaw": [4, 7, 12, 17, 18, 19, 25, 26, 30, 31, 32, 34, 35, 36, 37, 39, 41, 44, 46, 47, 56, 57, 59, 60, 61, 62, 63, 64, 68, 70, 72, 75, 77, 78, 81, 85, 96, 105, 111, 113, 114, 116, 139, 140, 141, 143, 144, 146, 148, 149, 154, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167], "parallel": [4, 24, 25, 47, 76, 87, 93, 95, 96, 98, 101, 103, 105, 109, 115, 116, 118, 125, 149], "ten": [4, 78], "thousand": [4, 78], "core": [4, 12, 78, 116, 127, 137], "wish": [4, 13, 14, 15, 24, 31, 38, 39, 52, 55, 62, 71, 80, 81, 96, 101, 104, 105, 107, 111, 113, 115, 125, 145, 153, 156, 157, 165], "discrib": 4, "book": [4, 12, 17, 27, 31, 46, 85, 103, 140], "levequ": [4, 16, 17, 26, 32, 56, 78, 92, 94, 96, 104, 110, 140, 148, 167, 170], "fvmhp": [4, 12, 16, 17, 27, 46, 78, 140, 148, 167, 170], "virtual": [4, 13, 27, 29, 106], "were": [4, 6, 14, 19, 22, 34, 45, 47, 58, 64, 67, 71, 72, 89, 115, 118, 119, 125, 128, 132, 135, 136, 137, 142, 144, 154, 162], "4": [4, 7, 8, 9, 13, 16, 17, 25, 27, 30, 32, 34, 35, 36, 39, 41, 42, 44, 45, 47, 48, 52, 55, 57, 58, 59, 66, 67, 68, 70, 71, 72, 76, 77, 81, 82, 84, 95, 96, 97, 98, 99, 101, 102, 104, 105, 109, 111, 115, 116, 118, 119, 124, 127, 132, 133, 135, 137, 139, 142, 148, 149, 150, 151, 152, 160, 161, 162, 164, 169], "3": [4, 6, 7, 15, 16, 19, 22, 24, 26, 27, 32, 34, 35, 36, 39, 41, 45, 47, 48, 55, 57, 59, 62, 63, 68, 71, 72, 75, 77, 82, 84, 85, 88, 91, 92, 94, 97, 98, 99, 102, 103, 104, 106, 110, 111, 115, 125, 127, 130, 136, 138, 140, 142, 145, 148, 149, 150, 151, 152, 160, 161, 162, 164, 167, 170], "pointer": [4, 16, 18, 19, 58, 75, 81, 84, 104, 109, 123], "code": [4, 5, 6, 7, 8, 12, 14, 16, 21, 22, 23, 24, 25, 26, 29, 31, 34, 35, 36, 37, 38, 39, 41, 43, 44, 45, 47, 48, 49, 52, 54, 56, 57, 58, 60, 65, 66, 67, 68, 74, 75, 76, 77, 78, 80, 82, 84, 85, 86, 88, 89, 94, 96, 97, 98, 99, 101, 104, 105, 108, 110, 111, 114, 117, 118, 119, 120, 123, 124, 125, 126, 127, 128, 129, 130, 132, 137, 139, 140, 141, 142, 146, 148, 149, 150, 151, 152, 153, 158, 160, 161, 162], "bibliographi": [4, 27], "paper": [4, 5, 6, 16, 19, 32, 48, 58, 92, 96], "distribut": [4, 12, 13, 31, 32, 58, 65, 75, 78, 86, 104, 110, 130], "under": [4, 7, 24, 34, 36, 40, 55, 56, 58, 61, 65, 67, 81, 86, 94, 96, 116, 125, 127, 138], "term": [4, 18, 19, 27, 48, 49, 52, 65, 75, 89, 94, 95, 104, 115, 118, 126, 127, 136, 137, 141, 148, 150, 151, 152, 156, 157], "berkelei": [4, 65, 86], "bsd": [4, 65, 86, 127], "contribut": [4, 26, 27, 61, 86, 89, 96, 101, 104, 113, 116], "its": [4, 6, 13, 18, 19, 24, 31, 34, 42, 52, 55, 65, 67, 70, 75, 77, 86, 91, 92, 93, 94, 96, 101, 103, 104, 106, 109, 115, 150, 164, 170], "incept": 4, "1994": [4, 65], "major": [4, 24, 59, 86, 89, 117, 119, 120, 121, 126, 128, 133, 136, 137], "design": [4, 29, 30, 55, 86, 88, 108, 142, 166], "made": [4, 19, 20, 24, 30, 32, 37, 62, 103, 106, 118, 119, 120, 125, 127, 130, 132, 135, 136, 137, 142, 144, 151, 159, 162, 164, 167], "individu": [4, 24, 25, 55, 63, 66, 67, 71, 94, 115, 116, 158], "randal": [4, 17, 96], "univers": [4, 17, 26, 58, 65, 86, 103], "washington": [4, 17, 26, 58, 65, 129, 142, 164], "rjlevequ": [4, 19, 30, 31], "marsha": [4, 6, 17], "berger": [4, 6, 17], "courant": [4, 6, 49, 115, 126, 148, 149, 150, 152], "institut": 4, "nyu": 4, "mjberger": 4, "jan": [4, 59], "olav": 4, "langseth": [4, 17], "norwegian": 4, "defenc": 4, "research": [4, 17, 48, 52, 86, 104, 114], "establish": 4, "david": [4, 17, 86, 96, 104], "georg": [4, 17, 32], "usg": [4, 32, 166], "cascad": 4, "volcano": 4, "observatori": 4, "dlgeorg": 4, "ketcheson": [4, 17, 79, 86, 96, 104], "kaust": [4, 26], "ketch": 4, "kyle": [4, 17, 86, 92, 96, 97, 102], "mandli": [4, 17, 86, 92, 96, 97, 102], "ut": 4, "austin": 4, "contributor": [4, 26, 65, 96], "aron": [4, 17, 86, 96], "ahmadia": [4, 17, 86, 96], "amal": [4, 17, 86, 96], "alghamdi": [4, 17, 86, 96], "ghamdi": 4, "ian": 4, "bollig": 4, "bolliger32": 4, "peter": 4, "blossei": 4, "donna": [4, 17], "calhoun": [4, 17, 55], "donnabois": 4, "ond\u0159ej": 4, "\u010dert\u00edk": 4, "certik": [4, 86], "brisa": 4, "davi": [4, 17], "brisadavi": [4, 128], "gradi": [4, 17, 86], "lemoin": [4, 17, 86], "gradylemoin": 4, "sorin": 4, "mitran": [4, 17], "matteo": [4, 17, 86, 96], "parsani": [4, 17, 86, 96], "mparsani": 4, "xinsheng": [4, 56], "qin": [4, 56], "xinshengqin": [4, 56], "avi": 4, "schwarzschild": 4, "aks2203": 4, "andi": 4, "terrel": 4, "aterrel": 4, "chri": 4, "vogl": 4, "cjvogl": 4, "numer": [4, 17, 55, 110, 128], "student": 4, "toward": [4, 32], "bug": [4, 8, 12, 24, 26, 44, 55, 68, 76, 82, 86, 118, 122, 123, 124, 125, 127, 132, 133, 134, 137], "suggest": [4, 18, 19, 26, 31, 51, 57, 58, 60, 62, 84, 85, 110, 138, 140, 151, 169], "improv": [4, 13, 24, 26, 34, 36, 55, 58, 97, 110, 118, 119, 120, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 148], "explor": [4, 36, 63, 82, 84], "thank": [4, 96], "pleas": [4, 26, 30, 58, 60, 61, 62, 86, 88, 91, 93, 96, 97, 99, 101, 103, 104, 105, 107, 113, 127, 132, 138, 140, 158], "itself": [4, 75, 81, 110, 130, 140, 151, 164], "well": [4, 6, 19, 30, 35, 48, 49, 55, 56, 58, 62, 63, 70, 75, 76, 77, 78, 81, 84, 85, 103, 104, 113, 126, 127, 130, 135, 141, 144, 148, 149, 156, 157, 158, 167, 170], "citat": [4, 19, 59], "similar": [4, 13, 16, 18, 30, 34, 36, 39, 47, 49, 55, 64, 88, 89, 97, 101, 104, 108, 127, 132, 151, 158, 159, 160, 162], "team": [4, 26, 65], "2024": [4, 20, 138], "10": [4, 17, 18, 19, 30, 32, 34, 36, 42, 49, 55, 56, 57, 59, 61, 62, 82, 88, 91, 94, 115, 124, 125, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 142, 148, 149, 150, 152, 154, 162], "http": [4, 12, 13, 17, 19, 26, 28, 30, 31, 32, 42, 51, 55, 56, 58, 59, 61, 62, 65, 70, 75, 85, 86, 89, 90, 97, 99, 101, 110, 111, 118, 122, 124, 125, 126, 128, 129, 132, 133, 134, 135, 136, 137, 138, 141, 158, 164], "www": [4, 13, 17, 32, 42, 48, 58, 65, 70, 86, 89, 94, 97, 99, 118, 126, 128, 135, 136, 158, 164], "org": [4, 17, 19, 48, 56, 58, 59, 65, 86, 89, 90, 94, 97, 99, 110, 111, 118, 124, 126, 128, 132, 133, 134, 135, 136, 137, 164], "doi": [4, 17, 56, 59, 61, 118, 130, 131, 132, 133, 134, 135, 136, 137, 138], "5281": [4, 59, 118, 130, 131, 132, 133, 134, 135, 136, 137, 138], "zenodo": [4, 61, 118, 130, 131, 132, 133, 134, 135, 136, 137, 138], "10896214": [4, 138], "here": [4, 13, 16, 18, 19, 31, 36, 41, 42, 52, 59, 62, 63, 70, 78, 82, 84, 88, 91, 96, 97, 99, 101, 102, 107, 108, 111, 113, 115, 123, 140, 141, 142, 159, 164, 170], "bibtex": [4, 59], "misc": [4, 129, 131], "url": [4, 12, 17, 55, 59, 127, 128, 162, 164], "year": [4, 17, 24, 55, 63, 96, 117, 128, 158], "releas": [4, 19, 20, 24, 27, 30, 31, 46, 49, 55, 60, 61, 62, 90, 96, 97, 104, 105, 110], "refer": [4, 5, 19, 22, 32, 34, 35, 36, 38, 39, 41, 48, 50, 55, 59, 66, 67, 71, 75, 88, 92, 94, 97, 98, 102, 104, 106, 111, 113, 127, 129, 139, 140, 142, 151, 158, 162, 164, 166, 167], "particular": [4, 6, 12, 22, 24, 30, 32, 34, 44, 47, 48, 50, 52, 55, 56, 59, 65, 66, 67, 71, 78, 82, 83, 85, 86, 88, 102, 103, 104, 106, 108, 113, 114, 115, 116, 118, 120, 123, 124, 125, 126, 127, 129, 130, 132, 147, 158, 159, 170], "obtain": [4, 6, 12, 34, 46, 47, 49, 50, 52, 62, 63, 72, 97, 98, 99, 115, 118, 132, 140, 144, 153, 162, 170], "your": [4, 6, 15, 16, 18, 19, 21, 22, 26, 27, 28, 36, 38, 40, 44, 47, 57, 58, 59, 60, 61, 62, 76, 81, 82, 84, 86, 87, 88, 89, 90, 93, 95, 96, 97, 98, 107, 108, 110, 111, 112, 113, 115, 116, 119, 127, 137, 140, 145, 146, 156, 157, 162, 165, 167], "multipl": [4, 5, 6, 13, 25, 30, 34, 35, 42, 47, 81, 88, 94, 97, 98, 109, 111, 116, 119, 125, 129, 139, 140, 149, 158, 159], "past": [4, 23, 27, 58, 64, 70, 103, 125, 128, 132, 138, 142, 143, 151], "17605": [4, 59, 138], "osf": [4, 138], "io": [4, 58, 59, 85, 98, 103, 138], "kmw6h": [4, 59, 138], "recent": [4, 13, 24, 29, 32, 49, 54, 58, 61, 66, 68, 76, 82, 84, 85, 118, 124, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 140, 154, 166], "articl": [4, 17, 96, 153], "l": [4, 7, 17, 34, 43, 61, 115, 140, 146, 150], "hadjimichael": [4, 17, 86], "2016": [4, 17, 26, 58], "build": [4, 17, 30, 31, 58, 59, 62, 71, 89, 99, 109, 126, 137, 142], "open": [4, 13, 17, 27, 30, 31, 32, 51, 55, 63, 81, 86, 90, 94, 97, 109, 142, 146, 166, 168], "ecosystem": [4, 17], "pde": [4, 5, 17, 60, 61, 62, 78, 85, 96, 108, 148, 167], "peerj": [4, 17], "scienc": [4, 17, 86], "7717": [4, 17], "c": [4, 16, 17, 30, 31, 32, 44, 55, 63, 65, 82, 86, 88, 89, 94, 102, 107, 108, 140], "68": [4, 17], "mandli2016clawpack": [4, 17], "yianni": [4, 17, 86], "journal": [4, 17, 56, 96, 153], "e68": [4, 17], "publish": [4, 17, 58, 96], "inc": [4, 17, 71], "least": [4, 5, 6, 13, 37, 47, 55, 63, 64, 70, 71, 107, 115, 116, 124, 125, 132, 148, 150, 154, 162, 164], "regard": [4, 41, 124, 158], "click": [4, 12, 13, 20, 30, 55, 58, 59, 116, 118, 126, 135, 136, 137, 138], "link": [4, 11, 13, 15, 17, 20, 21, 22, 26, 27, 30, 34, 36, 44, 45, 48, 55, 56, 57, 58, 59, 61, 63, 110, 111, 112, 118, 126, 135, 136, 137, 138, 140, 141, 143, 145, 152, 156, 157, 162, 166], "classic": [4, 6, 12, 15, 16, 21, 22, 24, 25, 26, 30, 44, 45, 46, 50, 59, 60, 61, 62, 67, 74, 76, 77, 78, 85, 86, 88, 91, 93, 94, 95, 96, 97, 101, 111, 112, 116, 139, 140, 145, 146, 149, 151, 157, 165, 167], "2d": [4, 7, 8, 15, 16, 18, 21, 24, 27, 29, 32, 34, 36, 37, 41, 42, 48, 49, 51, 56, 63, 71, 76, 81, 86, 88, 94, 96, 100, 104, 110, 112, 115, 118, 123, 125, 126, 127, 128, 129, 132, 136, 141, 142, 144, 145, 148, 149, 152, 154, 156, 157, 164, 168, 170], "leveque97": [4, 17], "3d": [4, 7, 15, 19, 24, 32, 71, 76, 81, 86, 96, 100, 104, 112, 115, 118, 119, 121, 123, 124, 125, 128, 136, 140, 142, 145, 148, 149, 156, 157, 168, 170], "langsethleveque00": [4, 17], "amr": [4, 7, 8, 16, 18, 19, 22, 25, 27, 29, 30, 34, 36, 37, 41, 47, 48, 49, 56, 63, 71, 72, 73, 77, 78, 81, 86, 94, 118, 124, 126, 127, 128, 130, 132, 135, 144, 147, 148, 150, 152, 161, 167], "bergerleveque98": [4, 6, 7, 17], "f": [4, 5, 6, 16, 17, 18, 22, 24, 27, 29, 30, 33, 66, 67, 89, 91, 97, 98, 101, 102, 104, 106, 107, 109, 119, 123, 126, 127, 128, 132, 141, 148, 149, 150, 152, 164, 165, 167], "balelevmitross02": [4, 17, 148, 170], "bergergeorgelevequemandli11": [4, 17], "levequegeorgeberg": [4, 17], "order": [4, 5, 6, 13, 16, 17, 18, 19, 31, 32, 34, 36, 47, 52, 57, 62, 64, 67, 70, 71, 72, 75, 77, 78, 82, 84, 85, 86, 88, 91, 92, 94, 96, 97, 98, 100, 101, 104, 108, 109, 110, 111, 115, 118, 123, 127, 132, 136, 140, 142, 144, 147, 148, 149, 150, 152, 158, 162, 164, 165, 167, 170], "sharpclaw": [4, 25, 27, 78, 86, 93, 95, 96, 101, 119, 140], "ketparlev13": [4, 17, 78, 96, 140], "ketchesonmandliet": [4, 17], "support": [4, 8, 13, 18, 19, 24, 36, 37, 41, 44, 49, 52, 55, 60, 61, 73, 75, 77, 85, 86, 88, 89, 94, 97, 98, 100, 102, 104, 115, 118, 123, 125, 126, 127, 128, 132, 133, 135, 136, 140, 142, 148, 149, 151, 158, 159, 162, 165, 168], "part": [4, 5, 19, 24, 26, 32, 36, 48, 51, 52, 62, 63, 64, 86, 89, 99, 105, 106, 108, 110, 114, 116, 118, 129, 167], "nsf": 4, "grant": [4, 86], "dm": 4, "8657319": 4, "9204329": 4, "9303404": 4, "9505021": 4, "96226645": 4, "9803442": 4, "0106511": 4, "cm": [4, 32, 75, 82, 142], "0245206": 4, "0609661": 4, "0914942": 4, "1216732": 4, "ear": 4, "1331412": 4, "cmmi": 4, "1536198": 4, "doe": [4, 5, 11, 16, 19, 22, 29, 30, 36, 42, 43, 49, 52, 55, 57, 58, 62, 71, 78, 82, 85, 94, 103, 106, 109, 115, 116, 120, 125, 129, 132, 135, 139, 140, 141, 144, 158, 164, 165, 167], "de": [4, 17, 86, 96, 142], "fg06": 4, "93er25181": 4, "fg03": 4, "96er25292": 4, "fg02": 4, "88er25053": 4, "92er25139": 4, "00er2592": 4, "fc02": 4, "01er25474": 4, "afosr": 4, "f49620": 4, "94": 4, "0132": 4, "nih": 4, "5r01ar53652": 4, "onr": 4, "n00014": 4, "09": [4, 94, 102, 161], "0649": 4, "council": 4, "nfr": 4, "through": [4, 13, 30, 36, 38, 39, 47, 49, 52, 55, 70, 71, 78, 81, 89, 101, 106, 108, 109, 111, 114, 115], "program": [4, 50, 52, 67, 78], "101039": 4, "420": 4, "scientif": [4, 17, 85, 96, 99, 110, 137], "divis": [4, 55], "nation": [4, 52, 158], "center": [4, 5, 29, 32, 34, 35, 36, 37, 42, 47, 55, 57, 63, 72, 75, 88, 94, 101, 102, 108, 115, 127, 142, 144, 149, 150, 151, 158, 159, 162, 167], "atmospher": 4, "ncar": 4, "boe": 4, "professorship": 4, "founder": 4, "depart": [4, 158], "mathemat": 4, "comot": 4, "fellowship": 4, "king": [4, 86], "abdullah": [4, 86], "technologi": [4, 86], "contract": [4, 65, 86], "state": [4, 13, 17, 19, 27, 30, 58, 75, 82, 88, 89, 91, 94, 96, 97, 98, 99, 101, 102, 103, 104, 107, 108, 116, 132, 133, 140, 141, 142, 148, 162, 170], "emerg": 4, "manag": [4, 12, 13, 55, 98, 158], "tsunami": [4, 5, 16, 17, 19, 26, 27, 34, 36, 42, 48, 50, 56, 68, 75, 98, 115, 119, 122, 128, 129, 135, 142, 143, 144, 151, 159, 162], "hazard": [4, 34, 48, 68, 143], "mitig": [4, 52], "nasa": 4, "asteroid": [4, 19], "threat": 4, "assess": [4, 52, 143], "project": [4, 5, 26, 27, 32, 52, 55, 58, 59, 75, 86, 90, 125, 126, 137, 149, 164], "planetari": 4, "defens": 4, "offic": 4, "opinion": 4, "conclus": [4, 55], "express": [4, 32, 65, 86, 105, 142], "materi": [4, 45, 65, 75, 86, 113, 130], "those": [4, 6, 10, 12, 18, 19, 24, 26, 52, 55, 56, 59, 70, 78, 88, 89, 91, 98, 101, 106, 115, 116, 119, 130, 132, 138, 139, 153, 160, 164, 167], "necessarili": [4, 42, 77, 97, 116], "agenc": [4, 60, 158, 159], "approach": [5, 7, 13, 18, 19, 30, 31, 41, 47, 49, 58, 61, 74, 81, 89, 96, 99, 101, 109, 115, 123, 125, 126, 128, 140, 141, 147, 167, 170], "introduc": [5, 16, 21, 34, 35, 36, 37, 42, 49, 82, 118, 130, 132, 139, 142, 144, 149, 170], "6": [5, 19, 24, 27, 30, 32, 34, 36, 41, 42, 44, 47, 51, 52, 55, 58, 63, 68, 70, 71, 72, 76, 82, 95, 96, 97, 101, 102, 104, 105, 110, 111, 115, 130, 138, 140, 142, 148, 149, 162, 169], "what": [5, 6, 9, 13, 14, 18, 19, 24, 27, 30, 32, 33, 34, 41, 49, 52, 54, 55, 58, 59, 61, 62, 63, 66, 67, 70, 71, 72, 77, 81, 88, 91, 95, 103, 106, 108, 111, 114, 115, 116, 124, 142, 143, 147, 148, 150, 151, 152, 153, 162, 164, 166, 167], "forward": [5, 64, 104, 115, 128, 167], "becaus": [5, 18, 19, 24, 29, 34, 36, 42, 55, 59, 70, 72, 97, 98, 99, 119, 140, 143, 148], "impact": [5, 19, 75], "autonom": 5, "shift": [5, 32, 52, 57], "perform": [5, 6, 17, 24, 29, 52, 55, 57, 76, 78, 81, 82, 91, 94, 97, 101, 104, 109, 116, 129, 132, 139, 140, 146, 151, 160], "snapshot": [5, 30, 98, 128], "save": [5, 13, 27, 28, 35, 36, 37, 42, 54, 63, 77, 91, 95, 104, 124, 125, 127, 132, 139, 159, 164], "space": [5, 6, 7, 16, 17, 27, 32, 34, 35, 36, 37, 47, 48, 51, 55, 57, 75, 77, 94, 98, 101, 115, 118, 123, 135, 139, 142, 148, 149, 150, 151, 152, 162, 164, 167], "interpol": [5, 6, 16, 19, 27, 32, 35, 37, 42, 47, 48, 57, 63, 64, 71, 75, 82, 118, 125, 132, 135, 142, 143, 144, 158, 159, 164], "regrid": [5, 10, 115, 119, 120, 125, 128, 129, 149, 150, 161], "davisleveque2018": [5, 17], "davis2018": [5, 17], "discuss": [5, 18, 19, 26, 30, 32, 52, 57, 70, 75, 97, 108, 110, 111, 115, 118, 125, 127, 140, 151, 154, 170], "when": [5, 14, 15, 16, 19, 22, 30, 31, 32, 34, 36, 37, 42, 43, 44, 47, 49, 53, 54, 55, 57, 58, 59, 61, 62, 64, 68, 70, 71, 75, 76, 77, 78, 81, 82, 84, 88, 95, 96, 97, 99, 100, 104, 107, 111, 115, 116, 118, 119, 120, 122, 124, 125, 126, 130, 132, 134, 135, 136, 140, 142, 143, 144, 145, 147, 148, 149, 150, 151, 152, 153, 158, 162, 164, 165, 166, 167, 168, 170], "accur": [5, 18, 19, 49, 52, 72, 75, 96, 104, 132, 148, 167, 170], "entir": [5, 6, 36, 41, 52, 55, 63, 70, 72, 75, 76, 78, 88, 98, 103, 113, 115, 120, 142, 164], "domain": [5, 6, 16, 17, 35, 36, 41, 42, 49, 52, 55, 58, 63, 75, 77, 87, 88, 89, 91, 99, 101, 103, 106, 113, 115, 118, 135, 149, 150, 151, 152, 162], "dimens": [5, 6, 7, 16, 22, 24, 27, 47, 48, 51, 57, 63, 71, 72, 88, 89, 91, 97, 99, 101, 102, 103, 106, 108, 115, 118, 127, 130, 140, 148, 149, 150, 152, 164, 167], "int_a": 5, "phi": 5, "dx": [5, 15, 17, 32, 34, 35, 36, 51, 57, 64, 75, 77, 89, 94, 98, 123, 127, 145, 162, 164, 167], "leq": [5, 142], "backward": [5, 30, 32, 35, 51, 63, 75, 77, 97, 120, 121, 136, 164], "small": [5, 16, 19, 36, 42, 47, 68, 70, 115, 116, 118, 119, 124, 139, 148, 150, 151, 162, 164, 166], "sai": [5, 13, 16, 30, 63, 107, 115], "x_1": [5, 142], "x_2": [5, 142], "might": [5, 10, 13, 14, 16, 24, 30, 31, 37, 38, 39, 40, 41, 42, 51, 55, 57, 58, 62, 67, 70, 71, 72, 76, 82, 85, 88, 98, 102, 111, 113, 114, 115, 119, 148, 149, 162, 164, 166, 167], "box": [5, 32, 35, 55, 63, 142, 164], "interv": [5, 47, 49, 51, 88, 108, 115, 132, 142, 148, 151], "elsewher": [5, 26, 42, 96, 142], "sharpli": 5, "peak": 5, "gaussian": [5, 88, 108, 152], "final": [5, 32, 37, 44, 58, 64, 71, 75, 88, 91, 98, 108, 113, 119, 139, 141, 148, 150, 152, 164], "necessari": [5, 6, 13, 18, 19, 30, 36, 37, 38, 39, 50, 52, 55, 58, 59, 62, 63, 71, 75, 77, 78, 84, 88, 89, 94, 97, 118, 123, 125, 127, 139, 140, 147, 148, 149, 162, 165, 167], "place": [5, 16, 22, 26, 30, 32, 38, 39, 55, 58, 62, 66, 67, 74, 96, 98, 99, 101, 105, 111, 119, 125, 137, 167], "earlier": [5, 19, 22, 24, 32, 34, 41, 47, 57, 75, 88, 101, 119, 126, 139, 162, 164], "help": [5, 7, 9, 25, 26, 27, 30, 31, 42, 43, 53, 58, 60, 66, 81, 84, 96, 99, 105, 109, 116, 124, 130, 140, 153, 165], "identifi": [5, 38, 39, 42, 55, 70, 89, 115, 130, 158], "hat": 5, "given": [5, 19, 32, 42, 51, 55, 57, 63, 68, 71, 75, 92, 97, 99, 103, 104, 106, 109, 115, 132, 142, 143, 144, 151, 162, 164, 167], "t_r": 5, "reach": [5, 115, 139], "acoustics_1d_adjoint": 5, "acoustics_2d_adjoint": 5, "main": [5, 11, 12, 19, 21, 30, 42, 46, 58, 59, 70, 71, 78, 89, 91, 97, 101, 108, 109, 116, 118, 126, 135], "subdirectori": [5, 12, 22, 24, 25, 38, 39, 58, 59, 62, 66, 74, 84, 93, 98, 111, 116, 135, 147, 151, 153, 160, 164], "must": [5, 6, 13, 16, 18, 19, 22, 24, 30, 32, 34, 36, 42, 46, 49, 50, 55, 58, 61, 65, 66, 67, 70, 71, 75, 76, 77, 86, 89, 96, 97, 98, 101, 103, 104, 106, 107, 108, 109, 111, 115, 119, 123, 140, 142, 143, 144, 148, 149, 150, 151, 152, 158, 164, 165, 166, 167, 170], "makefil": [5, 6, 11, 14, 15, 16, 21, 22, 25, 27, 30, 36, 38, 39, 44, 58, 76, 78, 82, 84, 89, 95, 96, 115, 118, 119, 123, 125, 127, 128, 130, 136, 144, 145, 148, 150, 151, 152, 153, 156, 157, 162, 165, 167], "coeffici": [5, 68, 101, 102, 104, 106, 107, 108, 140, 151], "matric": [5, 140, 170], "transpos": 5, "vice": 5, "versa": 5, "q_t": [5, 101, 102, 104, 108, 167, 170], "q_x": [5, 102, 108, 170], "_x": [5, 42, 70, 102, 104, 164, 167, 170], "eigenvalu": 5, "unchang": [5, 71], "upon": [5, 106], "transform": [5, 44], "eigenvector": [5, 140, 170], "right": [5, 19, 32, 34, 65, 68, 75, 86, 94, 99, 101, 102, 106, 108, 132, 139, 140, 142, 170], "rp1_acoustics_variable_adjoint": 5, "f90": [5, 9, 15, 18, 19, 22, 33, 34, 36, 42, 47, 49, 56, 66, 67, 76, 77, 85, 101, 112, 115, 119, 123, 125, 127, 128, 129, 130, 132, 133, 136, 140, 141, 144, 145, 154, 156, 157, 162, 165, 167], "boundari": [5, 7, 19, 22, 27, 42, 55, 63, 67, 70, 75, 76, 89, 94, 102, 104, 108, 113, 120, 123, 127, 142, 148, 150, 152], "condit": [5, 7, 19, 22, 27, 65, 67, 78, 86, 87, 88, 89, 91, 98, 104, 112, 119, 120, 123, 127, 143, 148, 150, 151, 152], "adjust": [5, 13, 18, 19, 22, 34, 35, 48, 63, 77, 94, 98, 136, 139, 143, 148, 167], "principl": [5, 164, 167], "vanish": 5, "dure": [5, 24, 34, 42, 47, 63, 75, 78, 119, 143, 144, 150, 151, 152, 154, 162], "integr": [5, 24, 57, 64, 86, 96, 98, 104, 119, 120, 124, 150, 152, 161, 162, 167], "qinit": [5, 22, 24, 42, 48, 66, 67, 89, 132, 143, 144, 167], "setrun": [5, 6, 7, 8, 14, 16, 21, 22, 27, 34, 35, 36, 37, 38, 39, 41, 42, 43, 45, 48, 49, 50, 52, 63, 64, 66, 68, 70, 77, 78, 82, 96, 112, 113, 115, 119, 123, 124, 125, 128, 130, 132, 135, 136, 137, 139, 140, 143, 144, 154, 158, 162, 165, 167], "clawdata": [5, 19, 41, 49, 77, 119, 123, 139, 148, 149, 150, 151, 152], "tfinal": [5, 77, 88, 91, 108, 139, 148, 150, 152], "via": [5, 13, 24, 25, 26, 30, 31, 32, 36, 38, 39, 44, 47, 50, 52, 55, 58, 59, 61, 62, 64, 66, 70, 71, 75, 76, 78, 82, 85, 88, 94, 97, 100, 103, 105, 107, 111, 115, 116, 118, 127, 130, 140, 142, 146, 151, 153, 156, 157, 162, 164, 167], "num_output_tim": [5, 77, 88, 91, 98, 139, 148, 150, 152], "larg": [5, 6, 12, 19, 22, 36, 37, 38, 39, 42, 52, 55, 57, 58, 71, 76, 81, 96, 98, 99, 115, 116, 118, 124, 132, 135, 139, 142, 144, 148, 149, 164, 166], "frequent": [5, 22, 29, 36, 47, 64, 107, 124, 135], "enough": [5, 47, 49, 58, 64, 70, 149, 159, 161, 162], "them": [5, 13, 20, 24, 30, 31, 32, 34, 47, 51, 55, 58, 71, 78, 86, 88, 93, 97, 98, 99, 101, 109, 113, 116, 118, 120, 129, 135, 136, 137, 142, 155, 158, 164, 167], "reason": [5, 19, 49, 52, 55, 63, 75, 76, 78, 99, 101, 115, 148], "output_format": [5, 36, 37, 77, 91, 98, 135, 148, 150, 152], "binari": [5, 36, 44, 47, 59, 65, 86, 98, 100, 124, 135, 136, 139, 148, 164, 168], "manner": [5, 36, 42, 47, 55, 64, 70, 75, 81, 127, 144, 148, 156, 157, 162], "attribut": [5, 7, 18, 24, 32, 36, 37, 41, 47, 70, 75, 81, 83, 84, 88, 91, 94, 97, 99, 101, 103, 104, 115, 118, 119, 124, 128, 136, 139, 147, 148, 149, 151, 158, 164], "clawutil": [5, 11, 14, 21, 22, 25, 30, 43, 44, 54, 59, 60, 61, 66, 111, 116, 146, 148, 149, 150, 152, 164, 165], "clawrundata": [5, 47, 63, 128, 139, 148, 149, 150, 152], "adjointdata": [5, 128, 129], "ia": 5, "attribur": 5, "toler": [5, 34, 102, 109, 115, 116, 125, 149, 150, 151], "rundata": [5, 18, 19, 24, 34, 36, 41, 42, 47, 49, 63, 64, 115, 119, 130, 137, 139, 144, 148, 149, 150, 151, 152, 154], "use_adjoint": 5, "adjoint_outdir": 5, "abspath": [5, 41], "_output": [5, 13, 14, 34, 36, 38, 39, 47, 54, 64, 71, 82, 84, 93, 98, 100, 103, 124, 131, 165], "period": [5, 6, 16, 34, 66, 88, 101, 115, 118, 148, 150, 152], "t1": [5, 41, 47, 63, 64, 115, 132, 149, 150, 151], "t0": [5, 18, 19, 77, 139, 148, 150, 151, 152, 162], "t2": [5, 41, 47, 63, 64, 115, 132, 149, 150, 151], "addit": [5, 7, 13, 16, 17, 19, 25, 26, 30, 31, 34, 36, 39, 40, 41, 48, 49, 50, 63, 70, 75, 77, 78, 82, 83, 89, 92, 94, 96, 98, 104, 105, 106, 113, 115, 118, 123, 125, 126, 127, 128, 131, 132, 134, 135, 136, 140, 142, 148, 152, 158, 161, 162, 167, 168], "aux": [5, 6, 15, 22, 24, 29, 47, 57, 89, 96, 97, 98, 101, 103, 104, 106, 107, 119, 120, 125, 127, 140, 141, 145, 148, 149, 150, 151, 152, 167], "inner": [5, 115, 128], "product": [5, 32, 65, 86, 109, 115, 128], "amrdata": [5, 24, 34, 115, 130, 132, 149, 150, 151], "aux_typ": [5, 149, 150], "append": [5, 22, 34, 36, 41, 42, 47, 55, 64, 82, 91, 103, 115, 124, 125, 137, 139, 140, 150, 151], "num_aux": [5, 89, 97, 99, 101, 102, 106, 140, 148, 149, 150, 152, 167], "len": [5, 32, 37, 94, 150, 152, 164], "innerprod_index": 5, "base": [5, 6, 13, 19, 22, 23, 24, 30, 31, 32, 34, 35, 36, 48, 49, 51, 55, 56, 57, 58, 63, 64, 67, 68, 70, 71, 75, 78, 89, 91, 92, 94, 96, 97, 102, 103, 104, 106, 108, 109, 115, 117, 123, 126, 128, 132, 135, 136, 143, 148, 149, 150, 151, 152, 158, 164, 167, 170], "richardson": [5, 7, 24, 149, 150], "error": [5, 16, 22, 38, 39, 43, 55, 62, 71, 76, 82, 91, 96, 97, 98, 109, 115, 116, 128, 132, 137, 149, 150, 158, 165], "estimat": [5, 150], "flag_richardson": [5, 115, 124, 149, 150], "flag_richardson_tol": [5, 115, 149, 150], "1e": [5, 70, 152], "flag2refin": [5, 7, 24, 149, 150], "flag2refine_tol": [5, 115, 149, 150], "01": [5, 17, 42, 77, 94, 164], "we": [5, 6, 18, 19, 24, 26, 28, 34, 38, 39, 41, 42, 47, 52, 55, 57, 58, 59, 60, 62, 67, 70, 72, 75, 81, 84, 88, 89, 90, 91, 93, 94, 97, 98, 99, 100, 101, 104, 105, 106, 107, 108, 109, 110, 113, 116, 127, 130, 135, 137, 140, 141, 142, 164], "attempt": [5, 8, 11, 22, 35, 38, 39, 66, 97, 103, 109, 116, 119, 133, 158, 164, 165], "estim": [5, 68, 115, 149, 151], "step": [5, 6, 10, 16, 18, 19, 21, 30, 34, 36, 38, 39, 40, 47, 55, 58, 59, 64, 71, 77, 78, 81, 84, 86, 87, 88, 89, 91, 98, 101, 104, 106, 108, 113, 115, 118, 119, 124, 125, 135, 139, 140, 146, 148, 149, 150, 151, 152, 162, 170], "extrapol": [5, 7, 16, 24, 72, 101, 108, 127, 148, 149, 150, 152], "togeth": [5, 16, 30, 31, 32, 58, 60, 75, 115, 135], "experiment": [5, 86], "simpli": [5, 13, 19, 36, 38, 39, 40, 42, 47, 49, 55, 57, 66, 67, 70, 72, 88, 90, 91, 93, 98, 99, 105, 116, 118, 140, 142, 153, 158, 164, 167, 168], "magnitud": [5, 32, 115, 127, 151], "greater": [5, 34, 63, 68, 70, 105, 115, 139, 148, 149, 151], "model": [5, 12, 16, 17, 18, 19, 26, 27, 32, 34, 44, 48, 49, 50, 56, 57, 68, 98, 115, 124, 129, 130, 131, 142, 143, 144, 151, 154, 158, 159, 162], "davisleveque2016": [5, 17], "chile2010_adjoint": 5, "shallow": [5, 15, 16, 17, 18, 19, 27, 34, 36, 42, 48, 49, 52, 56, 70, 78, 89, 96, 112, 118, 120, 121, 123, 125, 127, 128, 136, 137, 140, 144, 145, 151, 156, 157, 162, 167], "water": [5, 16, 17, 18, 19, 27, 36, 42, 47, 48, 49, 50, 51, 52, 63, 70, 78, 81, 89, 96, 118, 120, 121, 125, 127, 128, 137, 140, 142, 143, 144, 151, 162, 164, 166, 167], "while": [5, 13, 16, 19, 32, 42, 55, 71, 75, 82, 84, 89, 94, 98, 99, 104, 109, 127, 140, 144, 151, 166], "suitabl": [5, 8, 16, 18, 19, 22, 48, 52, 55, 73, 77, 103, 114, 140, 143, 158, 164], "To": [5, 6, 13, 14, 18, 19, 20, 24, 27, 30, 31, 38, 39, 40, 41, 42, 43, 47, 50, 53, 55, 56, 59, 66, 69, 70, 71, 75, 76, 77, 82, 84, 85, 88, 90, 92, 93, 96, 97, 98, 99, 100, 101, 104, 105, 108, 111, 113, 114, 115, 116, 118, 123, 125, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 139, 143, 146, 148, 149, 153, 162, 168], "date": [5, 17, 30, 43, 51, 55, 58, 59, 66, 82, 158, 165], "across": [5, 115, 125, 162, 164], "ocean": [5, 16, 17, 19, 34, 49, 52, 55, 113, 115, 142, 151, 156, 157, 162], "wai": [5, 6, 13, 16, 19, 28, 30, 36, 38, 39, 41, 42, 47, 49, 55, 57, 58, 61, 62, 63, 65, 66, 82, 84, 85, 86, 88, 91, 93, 94, 99, 101, 103, 105, 108, 110, 111, 113, 114, 119, 125, 126, 127, 130, 137, 138, 140, 142, 147, 148, 155, 159, 162, 167, 169, 170], "target": [5, 62, 82, 89, 101, 130], "possibli": [5, 32, 36, 70, 88, 94, 111, 118, 124, 144], "deep": [5, 49, 70], "amplitud": [5, 125], "compar": [5, 18, 19, 24, 39, 47, 49, 52, 55, 59, 82, 98, 115, 116, 143, 149, 160, 166, 170], "essenti": [5, 57, 71, 104, 151, 162], "rest": [5, 24, 84, 113, 127, 143, 156, 157, 162, 164], "henc": [5, 36, 57, 58, 67, 72, 104, 110, 111, 115, 144], "take": [5, 6, 24, 29, 30, 32, 34, 37, 51, 58, 68, 70, 71, 75, 82, 88, 94, 101, 104, 108, 109, 110, 115, 116, 118, 122, 128, 136, 144, 148, 149, 150, 151, 164, 167, 170], "rpn2_geoclaw_adjoint_qwav": 5, "rpt2_geoclaw_adjoint_qwav": 5, "non": [5, 16, 59, 70, 78, 89, 101, 108, 128, 130, 148, 150, 152, 158, 170], "vector": [5, 24, 88, 92, 98, 106, 127, 135, 140, 141], "split": [5, 6, 76, 94, 97, 104, 123, 124, 132, 148, 149, 150, 152, 161, 167, 170], "flux": [5, 17, 34, 36, 37, 94, 102, 104, 140, 148, 170], "comment": [5, 11, 19, 26, 53, 59, 126, 135, 139], "rpn2": [5, 140], "basic": [6, 10, 12, 27, 32, 38, 40, 48, 61, 70, 71, 88, 94, 96, 97, 98, 102, 104, 116, 140, 141, 158, 170], "strategi": 6, "logic": [6, 16, 17, 34, 132, 151], "rectangular": [6, 7, 16, 17, 32, 34, 37, 41, 42, 48, 50, 63, 70, 94, 115, 127, 130, 135, 149, 151, 162], "too": [6, 19, 51, 55, 58, 59, 118, 124, 142, 150, 152, 154], "portion": [6, 36, 42, 55, 70, 89, 135, 161], "factor": [6, 55, 149, 151, 161, 164], "direct": [6, 8, 16, 24, 32, 34, 36, 38, 39, 47, 49, 51, 55, 59, 63, 65, 66, 71, 75, 76, 82, 86, 91, 101, 108, 115, 126, 140, 148, 149, 151, 164], "anisotrop": [6, 24], "perhap": [6, 12, 19, 34, 42, 47, 58, 82, 106, 109, 115, 142], "section": [6, 13, 16, 36, 38, 39, 42, 44, 49, 50, 52, 58, 59, 67, 71, 81, 84, 96, 116, 132, 139, 148, 151, 164], "cfl": [6, 49, 94, 98, 104, 108, 118, 119, 124, 148, 150, 151, 152], "spatial": [6, 17, 27, 32, 36, 37, 41, 42, 47, 48, 49, 64, 68, 72, 101, 115, 119, 123, 130, 132, 140, 143, 149, 150, 151, 152, 170], "reduc": [6, 16, 36, 42, 49, 55, 118, 124, 126, 135, 170], "thu": [6, 51, 98, 101, 127, 158], "proce": [6, 18, 19, 30, 151], "advanc": [6, 17, 36, 56, 70, 76, 108, 124, 136, 148, 149, 167], "taken": [6, 34, 70, 75, 98, 104, 115, 148, 167], "around": [6, 32, 34, 42, 63, 97, 113, 116, 130, 149, 150, 158, 164, 167], "librari": [6, 13, 15, 16, 18, 19, 22, 24, 27, 29, 30, 34, 36, 38, 39, 44, 47, 49, 56, 63, 66, 76, 77, 78, 86, 92, 97, 99, 104, 109, 111, 112, 115, 125, 130, 144, 145, 149, 156, 157, 165, 167], "bcnamr": [6, 16, 127, 148, 150, 167], "check": [6, 14, 15, 16, 22, 34, 38, 39, 43, 44, 54, 55, 56, 58, 59, 60, 62, 66, 71, 82, 85, 88, 89, 91, 96, 99, 103, 104, 106, 108, 109, 111, 112, 115, 120, 129, 142, 144, 145, 149, 150, 156, 157, 158, 164, 165, 166, 167], "denot": [6, 19, 24, 37, 47, 57, 140, 164], "procedur": [6, 16, 42, 48, 49, 59, 167], "updat": [6, 12, 13, 24, 25, 27, 34, 53, 56, 61, 62, 64, 84, 96, 104, 106, 107, 110, 113, 118, 119, 123, 125, 126, 127, 128, 129, 130, 140, 149, 150, 152, 155, 158, 161, 167], "consist": [6, 27, 34, 36, 51, 55, 59, 63, 99, 110, 125, 135, 136, 140, 142, 151, 162, 167], "replac": [6, 13, 31, 36, 41, 47, 52, 56, 58, 59, 61, 64, 66, 81, 89, 93, 97, 99, 100, 101, 102, 106, 109, 116, 118, 119, 125, 127, 129, 130, 135, 139, 140, 144, 164, 165], "ly": [6, 70], "within": [6, 16, 30, 36, 37, 58, 62, 70, 72, 78, 82, 100, 109, 111, 115, 140, 142, 147, 153, 164], "approxim": [6, 16, 18, 19, 27, 35, 52, 55, 72, 75, 140], "lead": [6, 13, 24, 34, 36, 52, 55, 68, 71, 75, 111, 114, 132, 144, 149], "total": [6, 32, 36, 55, 75, 77, 98, 104, 148, 149, 150, 152, 161], "mass": [6, 98, 118, 154], "restor": 6, "global": [6, 14, 94, 106, 109, 118, 143, 162, 166, 167], "fix": [6, 21, 22, 24, 27, 35, 37, 41, 47, 48, 49, 58, 59, 63, 64, 66, 70, 72, 86, 97, 102, 118, 119, 120, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 141, 148, 150, 152, 164], "up": [6, 13, 19, 24, 30, 31, 32, 34, 36, 38, 39, 42, 43, 47, 48, 55, 58, 59, 63, 66, 70, 71, 75, 77, 82, 88, 89, 91, 93, 95, 96, 97, 99, 104, 105, 108, 111, 113, 115, 116, 118, 123, 124, 127, 130, 132, 137, 142, 144, 147, 150, 152, 161, 162, 165, 166], "style": [6, 24, 30, 32, 36, 41, 53, 55, 70, 73, 82, 86, 91, 127, 151], "olig": [6, 17], "colella": [6, 17], "bergeroliger84": [6, 17], "bergercolella89": [6, 17], "fortran": [6, 9, 11, 13, 14, 19, 22, 25, 29, 30, 32, 34, 35, 36, 37, 38, 47, 48, 50, 57, 60, 62, 66, 67, 68, 72, 76, 77, 78, 81, 84, 86, 88, 89, 91, 94, 96, 97, 99, 101, 102, 104, 105, 106, 109, 111, 118, 123, 124, 125, 127, 128, 129, 135, 136, 140, 141, 146, 149, 150, 151, 152, 158, 160, 161, 162], "written": [6, 11, 27, 32, 34, 36, 37, 43, 47, 62, 63, 64, 65, 75, 77, 78, 82, 86, 95, 96, 97, 101, 125, 140, 148, 149, 150, 151, 152, 158, 164, 167], "ga": [6, 102], "dynam": [6, 22, 32, 36, 52, 75, 78, 149], "merg": [6, 13, 27, 30, 56, 58, 59, 62, 123], "earli": [6, 22, 144], "mjb": [6, 17], "rjl": [6, 17, 111, 129], "fulli": [6, 52, 55, 56, 126, 130, 140, 151, 158, 159], "consid": [6, 42, 52, 62, 70, 89, 111, 146, 153, 164], "adjac": [6, 16, 34, 48, 115, 144, 148], "equival": [6, 47, 56, 57, 63, 64, 77, 129, 135, 162], "copi": [6, 14, 15, 16, 19, 38, 39, 47, 55, 58, 59, 62, 71, 88, 91, 101, 106, 112, 113, 114, 115, 120, 124, 127, 131, 144, 145, 149, 153, 156, 157, 162, 167], "interior": [6, 16, 42, 77, 106], "howev": [6, 13, 16, 18, 19, 24, 34, 38, 39, 42, 44, 49, 50, 52, 55, 62, 65, 67, 70, 72, 75, 76, 77, 86, 89, 96, 115, 116, 125, 127, 129, 143, 144, 147, 151, 161], "lie": [6, 34, 35, 37, 70, 72, 115, 130, 142], "outsid": [6, 16, 41, 63, 70, 130, 142, 144, 162, 164], "li": [6, 16, 34, 37, 72, 115, 142], "along": [6, 14, 16, 19, 26, 29, 32, 34, 42, 47, 55, 58, 61, 75, 77, 111, 115, 118, 123, 138, 139, 142, 144, 151, 166], "unless": [6, 34, 43, 44, 63, 102, 110, 143, 148, 149, 164], "standard": [6, 16, 19, 32, 34, 36, 49, 55, 57, 71, 77, 89, 92, 104, 111, 115, 116, 150, 151, 152, 153, 162, 167, 170], "beyond": [6, 32, 110, 127], "modifi": [6, 9, 14, 15, 16, 18, 19, 22, 24, 29, 34, 38, 39, 42, 47, 48, 58, 59, 62, 64, 66, 71, 74, 82, 89, 92, 94, 96, 101, 111, 112, 113, 114, 115, 122, 124, 125, 126, 127, 132, 142, 144, 145, 148, 150, 151, 152, 156, 157, 162, 164, 167], "damag": [6, 65, 86], "bcn": [6, 16, 152, 167], "nd": [6, 16, 115, 127, 130, 167], "actual": [6, 29, 32, 36, 57, 62, 63, 71, 75, 82, 92, 97, 109, 113, 143, 151], "softwar": [6, 13, 26, 27, 31, 48, 52, 65, 86, 96, 97, 98, 153, 162], "With": [6, 24, 30, 47, 51, 53, 55, 62, 70, 78, 115, 124, 140, 142, 148], "opposit": [6, 16, 97], "side": [6, 16, 19, 20, 34, 55, 58, 68, 75, 97, 116, 118, 135, 136, 137, 140, 170], "everi": [6, 12, 30, 34, 36, 47, 64, 66, 67, 77, 88, 91, 93, 97, 98, 106, 115, 116, 118, 125, 126, 140, 144, 146, 148, 150, 152, 158, 162, 164, 167], "few": [6, 12, 13, 19, 24, 28, 30, 31, 39, 49, 52, 58, 70, 71, 89, 104, 108, 110, 115, 116, 130, 143, 160, 162, 167], "coarsest": [6, 19, 36, 55, 77, 119, 139, 148], "revis": [6, 125], "shock": [6, 17, 52, 104, 115], "accord": [6, 57, 97], "criteria": [6, 7, 24, 27, 34, 70, 106], "cluster": [6, 17, 115, 149, 150], "rigoutsi": 6, "bergerrigoutsis91": [6, 17], "nonoverlap": 6, "rectangl": [6, 7, 27, 32, 36, 70, 75, 115, 130, 164], "balanc": [6, 17, 78, 126, 141, 156, 157], "conflict": [6, 30, 62, 66, 71, 107, 111], "goal": 6, "possibl": [6, 13, 24, 28, 30, 32, 34, 36, 37, 47, 49, 51, 52, 55, 64, 65, 66, 75, 82, 86, 94, 97, 99, 100, 104, 109, 111, 115, 140, 142, 143, 148, 149, 162, 166, 167], "minim": [6, 62, 70, 97, 142, 149, 164], "overhead": [6, 76, 115, 161], "cutoff": [6, 150], "control": [6, 7, 25, 27, 34, 36, 44, 47, 58, 62, 64, 71, 77, 84, 87, 92, 94, 96, 97, 98, 99, 101, 115, 125, 130, 141, 151], "fraction": [6, 13, 32, 115, 148, 167, 170], "7": [6, 14, 31, 34, 36, 41, 42, 47, 51, 58, 64, 68, 70, 77, 82, 85, 94, 105, 111, 115, 132, 138, 142, 143, 144, 149, 150], "70": [6, 36, 55], "realli": [6, 72, 116, 167], "At": [6, 13, 29, 30, 36, 38, 39, 42, 70, 99, 104, 108, 110, 115, 130, 148], "present": [6, 26, 63, 72, 94, 97, 102, 103, 104, 109, 153, 154, 167, 170], "previous": [6, 24, 34, 70, 77, 84, 118, 123, 130, 144], "bilinear": [6, 34, 42, 47, 57, 72, 119, 120, 162], "doxygen": [6, 7, 27, 126], "flowchart": [6, 7, 27], "capabl": [7, 12, 19, 24, 34, 36, 47, 52, 56, 64, 70, 78, 89, 96, 119, 124, 125, 127, 128, 129, 130, 131, 135, 136, 164, 166], "block": [7, 32, 35, 42, 63, 75, 77, 78, 88, 97, 106, 109, 116, 167], "structur": [7, 10, 24, 34, 36, 37, 41, 59, 62, 66, 78, 103, 104, 125, 142, 147, 164], "input": [7, 14, 16, 22, 25, 27, 29, 32, 35, 37, 43, 48, 55, 63, 67, 70, 71, 77, 88, 91, 92, 94, 96, 102, 103, 104, 109, 113, 124, 127, 128, 129, 140, 150, 151, 152, 158, 159, 162, 164, 167], "indic": [7, 16, 19, 22, 24, 27, 31, 32, 34, 36, 41, 42, 44, 47, 48, 55, 57, 59, 62, 67, 71, 72, 80, 84, 94, 98, 99, 102, 104, 108, 111, 115, 116, 125, 130, 132, 140, 141, 148, 149, 150, 151, 152, 154, 162, 164, 167], "tool": [7, 8, 17, 24, 25, 30, 32, 34, 35, 36, 37, 38, 39, 42, 48, 49, 50, 51, 52, 55, 57, 60, 61, 62, 63, 71, 75, 80, 81, 82, 83, 85, 96, 111, 114, 120, 121, 125, 126, 130, 131, 151, 153, 162, 164, 166, 168], "matlab": [7, 24, 27, 38, 39, 80, 81, 82, 100, 110, 118, 127, 130, 131], "deprec": [7, 32, 48, 58, 62, 118, 123, 127, 135, 137, 162, 164], "debug": [7, 18, 44, 66, 77, 81, 98, 106, 111, 116, 135, 148, 150], "flag": [7, 12, 13, 18, 24, 27, 30, 31, 41, 43, 44, 48, 56, 62, 76, 89, 107, 109, 111, 118, 123, 128, 132, 150, 151], "sampl": [7, 8, 14, 17, 18, 27, 31, 36, 44, 47, 48, 51, 55, 64, 75, 111, 116, 135, 139, 142, 148, 149, 162, 164, 167], "ghost": [7, 16, 19, 76, 77, 94, 97, 104, 106, 125, 132, 136, 148, 150, 152, 161, 167, 170], "flagregion": [7, 27, 70, 115, 130, 132, 142, 149, 151], "rule": [7, 13, 27, 63, 70, 89], "convex": [7, 34], "slu": 7, "bounding_box": [7, 35], "mask_outsid": [7, 70], "write": [7, 30, 32, 35, 36, 37, 41, 42, 47, 48, 54, 57, 58, 68, 75, 77, 78, 81, 88, 91, 94, 95, 97, 98, 99, 103, 118, 125, 127, 150, 152, 158, 162, 164], "instanti": [7, 91, 99, 101, 104, 106, 136, 150, 152], "make_kml": 7, "simpl": [7, 31, 38, 39, 41, 48, 59, 72, 75, 89, 96, 101, 102, 104, 109, 114, 116, 164], "select": [7, 12, 13, 15, 16, 30, 34, 42, 70, 97, 98, 104, 112, 115, 119, 126, 130, 138, 145, 148, 151, 156, 157, 166], "continent": [7, 70], "shelf": [7, 70], "guid": [7, 13, 17, 20, 25, 26, 27, 48, 50, 56, 61, 96, 110, 115, 118, 126, 130, 135, 136, 137, 155], "adjoint": [7, 17, 27, 56, 115, 127, 128], "gaug": [7, 27, 34, 36, 48, 49, 63, 72, 94, 95, 106, 113, 119, 123, 124, 125, 126, 127, 130, 135, 139, 143, 147, 150], "extend": [8, 16, 24, 42, 63, 70, 71, 94, 127, 142, 144, 151, 162, 164, 170], "directli": [8, 18, 19, 21, 25, 34, 48, 52, 61, 71, 75, 82, 84, 88, 89, 92, 96, 106, 109, 111, 127, 135, 164, 168], "obviou": [8, 55], "elimin": [8, 24, 70, 89, 111, 127, 151], "gallery_classic_amrclaw": 8, "num_cel": [8, 24, 49, 94, 140, 148, 149, 150, 152], "refinement_ratios_i": [8, 149, 150], "sweep": [8, 140], "transvers": [8, 94, 125, 132, 140, 141, 148, 167, 170], "graph": 9, "understand": [9, 27, 38, 39, 52, 81, 96, 108, 115, 140], "filpatch": [9, 42, 125, 129, 132], "idea": [10, 26, 32, 70, 71, 78, 88, 108, 120, 164, 170], "overal": [10, 88], "who": [10, 12, 21, 24, 26, 34, 44, 52, 60, 118], "gori": 10, "monster": 10, "column": [10, 32, 34, 47, 49, 52, 64, 98, 102, 123, 142, 164], "markup": 11, "languag": [11, 81, 109], "restructur": [11, 58], "text": [11, 58, 59, 63, 77, 91, 97, 104, 123], "sphinx": [11, 25, 27, 59, 126], "covert": 11, "convert_readm": 11, "brows": [11, 26, 45, 55, 71, 153, 167], "insert": [11, 16, 75, 97, 118, 146], "script": [11, 21, 22, 30, 32, 34, 36, 43, 47, 55, 58, 66, 71, 78, 81, 86, 89, 93, 95, 96, 98, 99, 104, 109, 111, 116, 127, 131, 140, 147, 151, 152, 164], "invok": [11, 14, 19, 76, 144, 165], "minor": [11, 19, 55, 58, 98, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 130, 132, 134, 136, 137], "syntax": [11, 61, 146], "highlight": [11, 13], "header": [11, 32, 34, 36, 42, 47, 57, 70, 75, 77, 97, 103, 123, 125, 127, 158, 162, 164], "complex": [12, 19, 36, 41, 94], "archiv": [12, 23, 39, 55, 59, 116, 153, 160, 164, 166], "github": [12, 15, 19, 24, 25, 26, 27, 28, 31, 56, 58, 61, 62, 93, 101, 105, 112, 116, 118, 122, 124, 125, 126, 135, 138, 140, 141, 145, 156, 157, 165], "app": [12, 13, 20, 25, 28, 30, 31, 40, 45, 46, 75, 113, 114, 118, 122, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 141], "com": [12, 13, 19, 25, 26, 28, 30, 31, 51, 56, 58, 59, 61, 62, 97, 99, 101, 105, 122, 124, 125, 126, 135, 138, 141], "fvmbook": [12, 17, 45, 46], "galleri": [12, 17, 27, 34, 36, 38, 39, 40, 45, 48, 49, 59, 80, 81, 93, 96, 110, 116, 122, 126, 153, 160, 167], "anim": [12, 16, 36, 45, 49, 55, 123, 130, 131, 135, 153], "instal": [12, 13, 19, 20, 25, 27, 31, 38, 46, 55, 58, 59, 84, 86, 87, 90, 95, 97, 108, 110, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 146, 169], "collect": [12, 27, 28, 30, 32, 34, 75, 81, 88, 104, 153], "either": [12, 16, 19, 22, 32, 34, 36, 42, 48, 50, 55, 64, 66, 70, 71, 75, 77, 82, 84, 88, 94, 96, 97, 98, 104, 109, 111, 115, 116, 123, 124, 125, 127, 135, 140, 142, 144, 149, 151, 158, 162, 164, 167, 170], "clone": [12, 20, 25, 26, 45, 56, 58, 59, 62, 85, 99, 105, 114, 118, 135, 136, 137, 165], "git": [12, 13, 25, 26, 27, 28, 56, 59, 62, 96, 105, 116, 129], "navig": [12, 31, 58, 153], "green": [12, 18, 19, 63, 70, 75, 82, 116, 164], "button": [12, 13, 30, 55, 63, 126], "download": [12, 13, 30, 31, 32, 39, 40, 42, 48, 55, 59, 61, 62, 93, 99, 105, 127, 128, 138, 160, 164, 165, 166], "zip": [12, 55, 59], "illustr": [12, 27, 32, 34, 38, 46, 48, 49, 55, 70, 71, 75, 77, 114, 122, 123, 127, 129, 140, 142, 153, 154, 164], "variou": [12, 19, 22, 24, 32, 36, 41, 46, 52, 58, 71, 72, 75, 82, 84, 94, 108, 110, 111, 115, 125, 140, 147, 151, 154, 158], "visibl": [12, 13, 46, 55, 114, 153], "render": [12, 24, 34, 46, 55, 63, 168], "advantag": [12, 19, 36, 47, 64, 81, 97, 110, 116, 142], "independ": [12, 25, 32, 36, 37], "contact": [12, 93, 96, 105], "u": [12, 13, 16, 26, 31, 34, 36, 37, 51, 52, 59, 60, 62, 64, 86, 93, 96, 102, 105, 106, 107, 108, 113, 126, 140, 149, 152, 158, 166], "storm": [12, 17, 26, 27, 48, 123, 126, 127, 128, 129, 131, 132, 133], "surg": [12, 17, 26, 27, 48, 123, 126, 127, 128, 129, 132, 158], "empti": [12, 36, 47, 103, 106, 109, 111, 118, 148, 151, 158, 164], "gitmodul": 12, "pull": [12, 26, 28, 31, 58, 59, 61, 93, 101, 116, 122, 125, 126, 132, 135, 140], "request": [12, 26, 28, 32, 36, 37, 47, 58, 61, 77, 88, 93, 94, 98, 101, 103, 116, 118, 125, 127, 132, 140, 151, 158, 164], "init": [12, 27, 30, 42, 48, 56, 59, 61, 143, 151], "leav": [12, 13, 16, 47, 62, 149, 164], "off": [12, 13, 47, 52, 55, 63, 71, 84, 91, 98, 115, 135, 149, 164], "won": [12, 13, 70, 89, 164], "hurt": [12, 67], "maintain": [12, 30, 110, 127, 149, 162, 167], "flavor": [12, 23, 97], "demonstr": [12, 27, 93, 99], "agre": [12, 30, 42, 57, 140, 161, 164, 167], "seen": [12, 24, 34, 38, 39, 40, 52, 76, 101, 148, 153], "cloud": 13, "elast": [13, 75], "sign": [13, 26, 82, 132, 158], "account": [13, 26, 30, 59, 90, 99, 139], "750": 13, "free": [13, 55, 66, 75, 86, 90, 101, 105, 107], "micro": 13, "suffici": [13, 16, 18, 19, 22, 36, 47, 75, 76, 77, 113, 119, 135, 148, 151], "tier": 13, "inform": [13, 14, 24, 27, 34, 35, 37, 38, 39, 49, 50, 51, 52, 53, 54, 62, 67, 77, 82, 83, 84, 88, 89, 94, 96, 98, 99, 100, 102, 103, 109, 111, 124, 127, 128, 130, 136, 138, 139, 140, 143, 146, 148, 149, 151, 158, 161, 162, 165, 166, 167, 168], "uw": [13, 26], "escienc": 13, "aw": 13, "tutori": [13, 31, 59, 84, 87, 91, 96, 105, 111, 114], "gear": 13, "faq": [13, 27, 81], "price": 13, "charg": 13, "per": [13, 32, 37, 47, 49, 55, 63, 71, 76, 97, 149], "thereof": 13, "regardless": [13, 37, 42, 70, 115, 148], "cpu": [13, 56, 124, 127, 129, 161], "consol": [13, 98, 151], "tab": [13, 58, 138], "east": [13, 162], "cheaper": 13, "rate": 13, "menu": [13, 20, 27, 58, 63, 118, 126, 135, 136, 137, 138, 143, 166], "imag": [13, 38, 39, 42, 59, 63, 70, 116, 127, 142], "platform": [13, 55, 91, 99, 110, 116], "finish": [13, 82, 88], "load": [13, 63, 98, 100, 103, 109, 116, 164, 168], "databas": [13, 32, 75, 109, 113, 127, 162], "uwamath": 13, "bar": [13, 58, 158], "screen": [13, 30, 55, 63, 91, 98, 99, 124, 150, 152], "shapshot": 13, "machin": [13, 27, 76, 78, 116, 125, 146], "disk": [13, 47, 88, 97, 98, 116, 125], "ubuntu": 13, "linux": [13, 74, 85, 107, 116, 146], "popup": 13, "look": [13, 14, 24, 27, 30, 32, 42, 55, 58, 59, 63, 71, 82, 84, 89, 94, 99, 103, 104, 108, 109, 111, 116, 120, 127, 136, 142, 148, 149, 151, 161, 164, 165], "sort": [13, 42, 127, 147, 165], "larger": [13, 22, 34, 49, 55, 63, 75, 76, 77, 82, 94, 119, 125, 132, 149, 151, 162], "cost": [13, 104], "continu": [13, 24, 30, 32, 51, 53, 58, 86, 110, 118, 140, 148, 170], "eventu": [13, 48, 130], "don": [13, 29, 30, 58, 59, 82, 97, 98, 99, 105, 116, 150, 165], "pair": [13, 51, 97, 116, 164], "secur": 13, "quick": [13, 27, 39, 48, 50, 60, 85, 116, 160], "close": [13, 42, 55, 58, 63, 70, 71, 97, 115, 118, 130, 149, 158], "back": [13, 29, 31, 58, 59, 126], "statu": [13, 30, 54, 91, 108], "wait": 13, "until": [13, 34, 64, 70, 137, 144], "refresh": [13, 47], "bottom": [13, 15, 19, 32, 38, 39, 48, 52, 68, 70, 75, 88, 101, 102, 125, 126, 145, 156, 157], "scroll": 13, "down": [13, 32, 98, 124, 158, 162, 164], "dn": 13, "screenshot": [13, 55], "rjlkei": 13, "pem": 13, "abl": [13, 58, 111], "ssh": [13, 30], "keypair": 13, "50": [13, 17, 34, 51, 55, 72, 104, 120, 150], "19": [13, 17, 26, 133, 134, 138, 161], "75": [13, 17, 92, 108, 142], "229": 13, "amazonaw": 13, "gfortran": [13, 62, 76, 85, 87, 107, 118, 146, 165], "ipython": [13, 78, 82, 84, 89, 90, 96, 98, 105, 108, 111, 123, 124], "scipi": [13, 37, 89, 110, 137, 158, 164], "netcdf": [13, 37, 44, 48, 124, 127, 129, 131, 158, 164, 166], "apach": 13, "server": [13, 31, 42, 55, 58, 59, 70, 127, 162, 166], "apt": [13, 85], "fetch": [13, 51], "bring": [13, 55, 58, 71, 151], "master": [13, 15, 27, 31, 58, 59, 62, 101, 112, 118, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 141, 145, 156, 157], "make_lib": 13, "compil": [13, 18, 19, 27, 38, 39, 43, 50, 62, 67, 76, 78, 84, 85, 89, 96, 97, 101, 105, 109, 118, 119, 140, 141, 146], "bashrc": [13, 44, 107, 146], "Of": [13, 28, 75, 108, 113, 162], "cours": [13, 28, 34, 47, 50, 64, 75, 99, 100, 108, 110, 113, 151, 162], "tar": [13, 129, 138], "instruct": [13, 19, 20, 26, 27, 38, 39, 42, 55, 56, 58, 59, 88, 90, 96, 99, 105, 108, 111, 118, 126, 133, 135, 136, 137, 138, 139, 165], "window": [13, 32, 71, 84, 146], "respons": [13, 52, 88, 103], "pretti": 13, "slow": [13, 55, 98, 107], "_plot": [13, 38, 39, 47, 71, 84, 118, 147, 153], "local": [13, 17, 19, 22, 27, 30, 55, 58, 63, 66, 67, 71, 92, 94, 101, 106, 125, 127, 136, 144, 162, 164, 167], "sftp": 13, "much": [13, 19, 30, 34, 36, 44, 49, 55, 77, 78, 81, 85, 110, 115, 119, 123, 130, 135, 136, 142, 148, 151, 161, 164], "smaller": [13, 36, 55, 68, 78, 94, 98, 119, 135, 144, 148, 150, 151, 152, 164], "quicker": [13, 142], "browser": [13, 30, 31, 38, 39, 55, 58, 153], "explain": [13, 19, 34, 52, 70, 132, 148, 153], "webserv": 13, "inbound": 13, "port": [13, 31, 95, 96, 101, 149], "22": [13, 26, 149, 164], "80": [13, 17, 55, 99, 142], "drop": [13, 18, 19, 58, 85, 130, 132, 144, 148], "tcp": 13, "Then": [13, 16, 30, 31, 32, 36, 47, 58, 59, 60, 67, 70, 75, 76, 84, 88, 91, 99, 105, 106, 107, 111, 118, 140, 142, 164, 165], "someth": [13, 29, 30, 58, 66, 74, 81, 98, 103, 104, 111, 118, 162, 165, 167], "shot": 13, "ln": 13, "expos": [13, 78], "home": [13, 31, 32, 62, 146], "scp": 13, "TO": [13, 65, 86], "send": [13, 26, 101, 140], "remot": [13, 55, 59, 127, 164, 166], "rel": [13, 18, 19, 22, 32, 43, 50, 52, 55, 75, 76, 82, 96, 109, 111, 116, 118, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 143, 149, 151, 153, 162, 166], "end": [13, 31, 32, 34, 35, 36, 47, 51, 55, 59, 63, 91, 98, 102, 108, 110, 113, 115, 118, 124, 125, 127, 139, 141, 142, 150, 152, 158, 161], "retriev": [13, 37, 51, 84, 89, 104, 164, 166], "sit": 13, "idl": 13, "action": [13, 14, 89], "restart": [13, 27, 47, 77, 84, 96, 118, 124, 125, 126, 127, 129, 132, 136, 148, 150, 152], "later": [13, 36, 37, 42, 54, 55, 62, 84, 104, 139], "But": [13, 19, 34, 42, 55, 72, 82, 107, 120, 127, 144, 146], "futur": [13, 24, 27, 28, 38, 39, 42, 49, 52, 57, 63, 68, 88, 104, 110, 124, 125, 127, 130, 136, 149, 158, 162], "job": [13, 134], "eb": 13, "runclaw": [14, 54, 118, 120, 129, 131, 137, 140], "autom": [14, 58, 89, 116], "certain": [14, 34, 48, 61, 70, 98, 115, 124, 142, 148], "keep": [14, 27, 30, 34, 35, 37, 38, 39, 76, 88, 91, 96, 106, 109, 116, 120], "log": [14, 27, 30, 31, 94, 95, 96, 103, 104], "came": 14, "rundir": [14, 91], "environ": [14, 18, 19, 27, 30, 38, 39, 40, 43, 54, 55, 58, 61, 62, 71, 74, 76, 78, 100, 107, 109, 111, 125, 164, 165], "noth": [15, 64, 106, 128, 145, 156, 157, 164, 167], "rememb": [15, 29, 76, 82, 99, 145, 156, 157], "b4step1": [15, 67, 167], "b4step2": [15, 145, 167], "b4step3": 15, "branch": [15, 20, 27, 31, 44, 54, 56, 59, 61, 62, 112, 116, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 145, 156, 157], "tag": [15, 55, 59, 61, 112, 145, 149, 150, 156, 157], "bathymetri": [15, 48, 52, 55, 63, 102, 113, 125, 127, 141, 143, 145, 151, 162, 164], "area": [15, 24, 48, 104, 113, 125, 144, 145], "dy": [15, 51, 57, 63, 64, 77, 89, 94, 98, 123, 127, 145, 162, 164], "capac": [15, 102, 145, 148, 149, 150, 152], "length": [15, 32, 37, 49, 52, 63, 75, 101, 106, 125, 132, 145, 148, 149, 150, 151, 167], "latter": [15, 18, 47, 70, 72, 101, 130, 142, 145, 148, 158, 167], "quantiti": [15, 18, 19, 34, 37, 63, 71, 72, 91, 95, 96, 102, 106, 141, 145, 151], "coordinate_system": [15, 18, 49, 64, 145, 151], "impos": [16, 89, 115, 156, 157, 170], "chapter": [16, 140, 148, 167], "choic": [16, 48, 81, 104, 148, 150, 151, 152, 167], "bc_lower": [16, 88, 101, 108, 148, 150, 152], "bc_upper": [16, 88, 101, 108, 148, 150, 152], "extrap": [16, 101, 108, 148, 150], "outflow": [16, 148, 150, 152], "move": [16, 34, 38, 39, 48, 58, 62, 64, 75, 101, 115, 119, 121, 126, 151, 154, 162, 163], "normal": [16, 19, 35, 36, 56, 58, 64, 82, 101, 111, 140, 141, 148, 149, 150, 151, 152], "fairli": [16, 52, 125], "good": [16, 19, 30, 52, 55, 65, 76, 86, 108, 113, 116, 125, 132, 140], "outgo": 16, "let": [16, 48, 62, 86, 113, 126, 132, 140], "without": [16, 24, 35, 43, 47, 52, 63, 65, 66, 67, 70, 71, 82, 84, 86, 92, 96, 97, 98, 109, 111, 116, 136, 142, 146, 150, 152, 158, 165, 167], "particularli": [16, 19, 29, 31, 34, 36, 54, 55, 60, 61, 62, 75, 77, 111, 120, 123, 127, 132, 136, 144, 162], "perfect": 16, "hit": [16, 17, 36, 71, 77, 84, 98, 148], "obliqu": 16, "perfectli": 16, "wall": [16, 44, 101, 108, 124, 127, 129, 148, 150, 152, 161], "veloc": [16, 34, 36, 51, 64, 71, 84, 101, 102, 108, 125, 135, 143, 148, 149, 150, 151, 152, 167], "momentum": [16, 18, 34, 36, 37, 52, 64, 68, 98, 132, 141, 151, 154, 162], "third": [16, 18, 19, 34, 57, 92, 161, 164], "acoust": [16, 31, 38, 39, 52, 87, 88, 91, 93, 96, 104, 105, 123, 140, 150, 167], "p": [16, 17, 31, 84, 86, 88, 94, 97, 98, 102, 106, 118, 140, 170], "hu": [16, 18, 19, 36, 37, 64, 68, 102, 141, 151], "hv": [16, 19, 36, 37, 64, 68, 141, 151], "equal": [16, 19, 32, 34, 35, 36, 37, 49, 51, 55, 72, 75, 77, 99, 101, 115, 139, 142, 148, 150, 152, 162, 164], "far": [16, 18, 19, 41, 45, 70, 81, 128, 130, 132, 135], "symmetri": [16, 49], "physic": [16, 19, 47, 49, 55, 89, 94, 96, 108, 115, 170], "slightli": [16, 19, 42, 57, 125, 126, 132, 142], "complic": [16, 82, 89, 142, 147], "alwai": [16, 19, 24, 28, 29, 30, 34, 36, 37, 44, 57, 58, 62, 71, 88, 97, 114, 115, 119, 120, 132, 136, 144, 148, 150, 152, 162, 167], "alon": [16, 55], "topographi": [16, 17, 19, 27, 34, 35, 36, 37, 47, 48, 49, 52, 57, 63, 68, 72, 75, 83, 113, 114, 118, 119, 120, 121, 123, 124, 127, 130, 133, 136, 142, 143, 144, 156, 157, 163], "artifici": [16, 144], "ignor": [16, 49, 55, 63, 97, 123, 132, 143, 164], "incom": 16, "truncat": [16, 36, 77, 97, 148], "spuriou": [16, 34, 116], "extropl": 16, "dry": [16, 17, 27, 34, 48, 102, 130, 133, 141, 144], "land": [16, 42, 48, 50, 55, 58, 59, 63, 70, 72, 83, 130, 144, 151, 164], "tank": [16, 49, 52], "bc2amr": [16, 127], "calhounhelzellevequ": 16, "envis": 16, "fold": 16, "piec": [16, 52, 94], "glu": 16, "inflat": 16, "websit": [16, 55, 58, 97, 153, 164], "bergercalhounhelzellevequ": 16, "hint": [16, 27, 48, 81, 84, 111, 151, 165], "suppos": [16, 67, 70, 71, 82, 111, 115], "bit": [16, 24, 32, 59, 97, 99, 107, 141], "examin": [16, 38, 39, 47, 70, 111, 135], "own": [16, 22, 26, 30, 36, 62, 88, 89, 95, 96, 105, 106, 113, 115, 127, 140, 153], "todo": [16, 140, 158, 164, 170], "poster": 17, "resourc": [17, 26, 30, 50, 110], "bale": 17, "rossmanith": 17, "siam": [17, 26, 27, 96, 140], "sci": 17, "24": [17, 55, 72, 142], "2002": 17, "955": [17, 142], "978": 17, "author": [17, 27, 48, 52, 92, 96, 97, 102, 114], "1989": 17, "hydrodynam": 17, "phy": 17, "82": 17, "64": [17, 94, 97, 99, 107], "84": [17, 55], "34": [17, 55, 63, 96], "2011": [17, 26, 86], "pp": 17, "1195": 17, "1206": 17, "adv": 17, "awr11": 17, "1998": 17, "anal": 17, "35": [17, 34, 57, 75, 96], "2298": 17, "2316": 17, "bergerleveque2023": [17, 18, 19, 49], "2023": [17, 45, 118, 136, 137, 138], "implicit": [17, 19, 86, 104], "dispers": [17, 18, 48, 49, 52], "submit": 17, "1984": 17, "partial": [17, 78, 113], "differenti": [17, 32], "53": 17, "484": 17, "512": 17, "rigoutso": 17, "1991": 17, "ieee": 17, "tran": 17, "sy": [17, 42, 70, 91, 150, 152], "man": [17, 27, 48, 52, 151, 156, 157], "cyber": 17, "21": [17, 71, 92, 94, 123, 124, 138], "1278": 17, "1286": 17, "2018": [17, 26, 58, 127, 128, 138], "phd": 17, "thesi": [17, 104], "pure": [17, 56, 84, 94, 96, 97, 99, 104, 116, 141], "appl": 17, "geophi": 17, "173": 17, "4055": 17, "4074": 17, "info": [17, 31, 32, 35, 36, 37, 47, 59, 63, 71, 91, 94, 97, 98, 104, 125, 135, 149, 150, 158], "analysi": 17, "evalu": [17, 29, 32, 36, 37, 68, 72, 88, 94, 104, 164, 167], "preprint": 17, "2000": [17, 57, 162, 164], "165": [17, 161], "126": [17, 164], "166": 17, "leveque96": 17, "1996": 17, "advect": [17, 82, 96, 99, 140, 141, 152, 167], "incompress": 17, "leveque1996": 17, "33": [17, 94, 142], "627": 17, "665": 17, "1997": [17, 96], "multi": [17, 55, 88, 119, 121, 124, 127, 167], "131": [17, 96], "327": [17, 96], "353": [17, 96], "wpalg": 17, "cambridg": 17, "press": [17, 99, 105], "uk": [17, 32], "fvmhp_materi": 17, "acta": 17, "numerica": 17, "211": 17, "289": 17, "dg": 17, "actanum2011": 17, "techniqu": [17, 28], "2013": [17, 26, 96], "a351": [17, 96], "a377": [17, 96], "manuel": [17, 86, 96], "quezada": [17, 86, 96], "luna": [17, 86, 96], "matthew": [17, 86, 96], "kneplei": [17, 86, 96], "emmett": [17, 86, 96], "2012": [17, 24, 26, 52, 96], "scalabl": [17, 96], "c210": [17, 96], "c231": [17, 96], "sisc": [17, 96], "month": [17, 55, 96], "nov": [17, 96], "kimetal2017": [17, 19], "kim": [17, 19], "pedersen": 17, "lovholt": 17, "boussinesq": [17, 27, 48, 49, 52, 118, 137], "studi": [17, 19, 52, 68], "break": [17, 18, 30, 32, 48, 52, 55, 63, 75, 116, 124, 144, 151, 164], "phenomena": [17, 19], "long": [17, 18, 19, 30, 32, 49, 51, 52, 55, 63, 74, 96, 124, 132, 149, 164], "coastal": [17, 52, 130, 143, 144, 151, 162], "engin": [17, 55], "122": [17, 42, 70, 142, 164], "2017": [17, 26, 59, 102, 125, 126, 127, 138], "86": 17, "1016": 17, "coastaleng": 17, "005": 17, "kim201775": 17, "jihwan": [17, 19], "geir": 17, "finn": 17, "vholt": 17, "mandlietal2016": 17, "googl": [17, 26, 27, 30, 42, 48, 51, 63, 70, 93, 97, 99, 107, 123, 125, 133, 140, 142], "scholar": 17, "hundr": [17, 36], "calhellev08": 17, "helzel": 17, "circular": 17, "spheric": [17, 49, 55, 118, 137], "review": [17, 92], "2008": [17, 86, 92, 102], "723": 17, "752": 17, "leveque09": 17, "reproduc": [17, 57, 65, 86], "cise": 17, "11": [17, 34, 82, 102, 131, 132, 138], "2009": [17, 92, 97, 102], "27": [17, 55, 63, 72, 142], "levyon03": 17, "darryl": 17, "yong": 17, "solitari": 17, "layer": [17, 27, 47, 63, 94, 119, 121, 124, 125, 127], "media": 17, "math": [17, 51, 55, 108], "63": [17, 142], "2003": 17, "1539": 17, "1560": 17, "mandli13a": 17, "72": [17, 55, 75], "91": 17, "2013it": 17, "aug": [17, 128], "mandli13b": 17, "dawson": 17, "36": [17, 51, 77, 94], "2014": [17, 26, 102, 117, 119, 120, 121, 122, 123, 138], "clint": 17, "okada85": [17, 32, 75], "okada": [17, 27, 32, 48, 49, 114, 162, 166], "deform": [17, 32, 35, 37, 48, 75, 166], "due": [17, 26, 32, 42, 51, 75, 116, 126, 127, 132, 144, 154, 165], "shear": [17, 32], "tensil": 17, "fault": [17, 27, 32, 48, 49, 114, 127, 134, 162, 166], "bull": [17, 32], "seism": [17, 32], "soc": [17, 32], "am": [17, 32], "1985": [17, 32], "1135": 17, "1154": 17, "repositori": [18, 19, 24, 26, 27, 28, 31, 39, 40, 45, 46, 48, 49, 56, 61, 62, 66, 67, 96, 104, 111, 113, 114, 116, 122, 125, 138, 155], "literatur": [18, 19, 52, 140], "situat": [18, 19, 49, 55, 70, 71, 132], "wavelength": [18, 19, 49, 52], "fluid": [18, 19, 34, 36, 49, 52, 64, 72, 118, 143], "swe": [18, 48], "deriv": [18, 19, 65, 75, 86, 91, 95, 96, 106, 116], "longer": [18, 19, 22, 30, 47, 58, 59, 63, 85, 110, 125, 127, 130, 132, 136, 137, 139, 140, 151, 162, 166], "respect": [18, 32, 34, 49, 55, 63, 96, 97, 102, 164], "txx": 18, "altern": [18, 19, 32, 35, 36, 38, 39, 47, 48, 51, 55, 60, 66, 71, 81, 96, 99, 111, 115, 118, 123, 124, 125], "ellipt": [18, 19], "involv": [18, 19, 26, 101, 104, 113, 154, 159], "xx": [18, 118], "tridiagon": 18, "sgn": [18, 48], "serr": [18, 19], "naghdi": [18, 19], "madsen": [18, 48], "sorensen": [18, 48], "properti": [18, 32, 37, 49, 64, 71, 88, 91, 94, 103, 106, 164], "less": [18, 19, 42, 52, 55, 64, 68, 76, 104, 115, 116, 132, 148], "stabl": [18, 19, 85, 94, 132], "plane": [18, 32, 49, 75, 124, 142, 166], "planar": [18, 49, 75, 140, 141], "axisymmetr": [18, 49], "sphere": [18, 27, 32, 48, 49, 51, 89, 118, 120, 136, 137, 141, 151], "topo": [18, 27, 34, 35, 42, 48, 49, 52, 55, 57, 63, 70, 72, 83, 111, 118, 119, 121, 127, 129, 132, 136, 143, 151, 162, 164], "dtopo": [18, 27, 32, 35, 48, 52, 57, 63, 75, 111, 119, 121, 122, 130, 132, 144, 151, 162, 164, 166], "ident": [18, 42, 67, 94, 97, 99, 116, 164], "bouss_": 18, "templat": [18, 89], "bouss": [18, 19, 49, 118], "lapack": [18, 19, 118, 119], "fflag": [18, 19, 30, 43, 66, 76, 89, 109, 162], "llapack": [18, 107], "lbla": [18, 107], "explicit": [18, 109, 149], "lapack_tridiag": 18, "soubroutin": 18, "bla": [18, 19, 118], "bouss_wavetank_matsuyama": 18, "openmp": [18, 24, 27, 44, 78, 109, 115, 124, 130, 161], "somewher": [18, 19, 123], "boussdata1d": 18, "add_data": [18, 19], "bouss_data": [18, 19], "deepbouss": 18, "switch": [18, 31, 48, 55, 62, 101, 111, 116, 118, 126, 143, 166], "bouss_equ": [18, 19], "alpha": [18, 19, 55, 59, 104], "153": [18, 19], "hardwir": [18, 19, 76], "bouss_modul": [18, 19], "tip": [18, 19, 26, 48, 62, 81, 95, 96, 101, 110], "similarli": [18, 36, 43, 56, 93, 99, 101, 142, 161], "bparam": [18, 19], "15": [18, 19, 34, 42, 57, 59, 63, 70, 75, 94, 142, 150, 161, 164], "caus": [18, 19, 24, 36, 52, 55, 58, 65, 66, 72, 78, 84, 86, 107, 116, 124, 125, 126, 128, 132, 147, 149, 162, 164], "revert": [18, 19, 55], "nondispers": [18, 19], "bouss_min_depth": [18, 19], "criterion": [18, 19, 34, 115, 150], "onshor": [18, 19, 34, 49, 63, 68, 70, 142, 144], "nearest": [18, 19, 37, 42, 47, 164], "omit": [18, 19, 62, 116, 118, 125, 139, 151], "unknown": [18, 19, 32, 106], "inund": [18, 19, 34, 48, 49, 55, 68, 115, 130, 143, 166], "shore": [18, 19, 36, 42, 48, 115, 130, 144], "simplest": [18, 19, 62, 74, 108], "known": [19, 34, 44, 71, 75, 76, 82, 105, 107, 116, 126, 148], "landslid": [19, 52], "realist": [19, 55], "test": [19, 24, 27, 32, 38, 41, 44, 54, 55, 59, 60, 61, 62, 68, 81, 86, 87, 89, 95, 96, 102, 109, 110, 115, 120, 124, 125, 126, 127, 130, 132, 136, 140, 152, 158, 161, 162, 164], "One": [19, 25, 27, 28, 32, 34, 47, 48, 55, 58, 64, 70, 71, 72, 89, 109, 115, 118, 123, 164], "momenta": [19, 64], "effici": [19, 52, 56, 86, 96, 97, 98, 106, 115, 142, 149], "consider": [19, 52, 88], "oper": [19, 53, 116, 125], "spars": [19, 118], "huc": 19, "hvc": 19, "expand": [19, 28, 42, 55, 63], "petsc": [19, 24, 25, 78, 86, 88, 95, 98, 105, 106, 107, 109, 118], "mpi": [19, 78, 99, 118], "prerequesit": 19, "simplic": 19, "practic": [19, 30, 111, 113, 154], "variant": [19, 22, 60, 109, 116, 118], "tune": [19, 28, 149], "match": [19, 32, 36, 41, 55, 63, 97, 103, 116, 158, 164], "airi": 19, "theori": [19, 65, 86, 170], "incorpor": [19, 24, 52, 58, 86, 104, 119, 126, 141, 164], "bonneton": 19, "et": 19, "al": 19, "histor": [19, 52, 75, 166], "boussclaw": 19, "successfulli": [19, 66, 103], "reveal": [19, 47, 108], "stabil": [19, 104, 132, 148], "report": [19, 26, 32, 34, 54, 111, 116, 124, 127, 146, 148, 150], "except": [19, 24, 29, 32, 42, 49, 97, 102, 109, 130, 137, 148, 151, 158, 162], "investig": [19, 116], "radial_flat": 19, "num_eqn": [19, 77, 88, 89, 92, 97, 99, 101, 102, 103, 106, 108, 140, 148, 150, 152, 167], "facilit": [19, 47, 64, 96, 116, 123, 125, 130, 136, 153, 158], "boussdata": 19, "bouss_min_level": 19, "bouss_max_level": 19, "bouss_solv": 19, "bouss_tstart": 19, "avoid": [19, 42, 55, 58, 63, 66, 71, 94, 98, 115, 118, 119, 120, 124, 125, 132, 134, 139, 148, 151, 170], "altogeth": 19, "neighborhood": 19, "recogn": [19, 50, 57, 62, 162], "extrem": [19, 55, 107], "motion": [19, 75, 162], "did": [19, 127, 132, 142, 162], "petsc_dir": [19, 99], "petsc_arch": [19, 99], "shell": [19, 30, 61, 62, 76, 82, 84, 99, 105, 108, 111, 125, 146], "dhave_petsc": 19, "petsc_opt": 19, "options_fil": 19, "petscmpiopt": 19, "adequ": [19, 52], "briefli": [19, 170], "gmre": 19, "krylov": 19, "algebra": 19, "multigrid": 19, "precondition": 19, "manualpag": 19, "ksp": 19, "kspsetfromopt": 19, "pc": 19, "pcsetfromopt": 19, "ex": [19, 38, 39, 91, 118], "xgeoclaw": 19, "runex": [19, 118], "bin": [19, 47, 99, 139], "mpiexec": [19, 99], "word": [19, 98, 127, 158], "process": [19, 27, 36, 38, 39, 48, 55, 56, 75, 88, 93, 94, 99, 105, 106, 109, 116, 118, 125, 135, 137, 148, 165], "incorrectli": [19, 124], "configur": [19, 82, 88, 99, 164], "environment": 19, "implicitamr": 19, "accompani": [19, 20, 23, 118, 135, 136, 137], "march": [20, 26, 27, 34, 41, 42, 48, 119, 120, 138, 142], "29": [20, 138], "featur": [20, 24, 27, 30, 34, 42, 55, 58, 71, 82, 89, 115, 116, 118, 122, 124, 125, 127, 132, 135, 136, 137, 138, 158, 162], "dev": [20, 26, 30, 58, 59, 99, 118, 127, 128, 133, 134, 135, 136, 137, 138], "diff": [20, 54, 59, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "tarfil": [20, 59, 62, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "pip": [20, 27, 30, 55, 59, 60, 90, 96, 99, 105, 107, 111, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 146], "doc": [20, 25, 26, 30, 32, 55, 59, 92, 109, 110, 111, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 155], "docker": [20, 27, 59, 60, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 169], "migrat": 21, "intermedi": [21, 34, 37, 75, 139, 167], "easiest": [21, 30, 44, 78, 82, 84, 115, 167], "bulk": [21, 88, 102, 108, 140, 150, 167], "convers": [21, 27, 89, 97, 115, 142, 162, 166], "convert43to46": 21, "inspect": [21, 22, 55], "broken": [21, 22, 30, 75, 116], "renam": [22, 24, 38, 39, 66, 101, 104], "achiev": [22, 89, 156, 157], "convert46to50": 22, "_4": 22, "complet": [22, 24, 30, 51, 66, 84, 88, 89, 99, 109, 116, 137], "delet": [22, 30, 58, 62, 137], "combin": [22, 58, 63, 124, 166], "properli": [22, 34, 38, 39, 42, 43, 52, 55, 57, 58, 62, 63, 70, 74, 77, 91, 116, 119, 122, 127, 130, 132, 146, 148, 151, 154, 162, 164, 165, 167], "permut": 22, "th": [22, 24, 47, 140, 167], "reorder": [22, 24], "pattern": [22, 50, 55, 143], "carefulli": [22, 24, 68], "setaux": [22, 24, 67, 89, 119, 120, 140, 148, 150, 152], "sequenc": [22, 24, 36, 37, 67, 70, 72, 99, 105, 108, 109, 116, 119, 126, 140, 167], "maxmx": [22, 89], "maxmi": [22, 89], "maxmz": 22, "declar": [22, 24, 106, 132, 167], "memori": [22, 24, 76, 77, 78, 88, 91, 98, 106, 132, 149, 150], "alloc": [22, 104, 123, 132, 149], "mx": [22, 24, 49, 57, 77, 89, 99, 102, 140, 150, 162, 167], "resp": [22, 32, 132], "mz": [22, 24], "driver": [22, 67], "led": [22, 128], "homepag": [23, 27], "reorgan": [24, 89, 117, 133], "changelog": [24, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 138], "concern": [24, 48, 149], "evolv": [24, 88, 91, 104], "organ": [24, 25, 38, 39, 91], "affect": [24, 66, 125, 126, 132, 135, 137, 148, 162, 165], "assist": [24, 130], "older": [24, 44, 56, 58, 61, 62, 104, 118, 131, 135, 138, 149], "compris": [24, 96, 164], "webpag": [24, 26, 38, 39, 45, 50, 55, 59, 66, 128, 143], "primari": [24, 30, 31, 48, 113, 116, 158], "auxiliari": [24, 89, 91, 97, 102, 103, 104, 106, 140, 148, 150, 152, 167], "cach": [24, 51, 59, 84, 86, 130, 149], "stride": [24, 164], "contingu": 24, "maux": [24, 140, 167], "ma": [24, 36, 42, 70, 142, 164], "relev": [24, 29, 42, 44, 48, 55, 58, 97, 115, 116, 158], "flexibl": [24, 32, 63, 89, 123, 126, 140, 142, 149], "clean": [24, 58, 59, 109, 118, 123, 127, 137], "systemat": 24, "obscur": 24, "clarifi": 24, "regress": [24, 27, 30, 54, 96, 99, 125, 126, 160], "travi": [24, 132], "miss": [24, 27, 97, 118, 129, 136, 137, 154, 158, 162, 164, 165], "conform": [24, 30, 35, 103, 127, 162], "construct": [24, 32, 34, 57, 72, 88, 94, 109, 136, 158, 159, 162], "visit": [24, 27, 81, 138], "gui": [24, 168], "monitor": [24, 27, 35, 36, 41, 48, 70, 72, 76, 120, 122, 125, 135], "arriv": [24, 34, 36, 42, 48, 125, 143, 144], "fgmax": [24, 27, 36, 41, 48, 63, 72, 76, 120, 122, 125, 126, 130, 131, 135, 136, 137, 151], "ndim": [24, 77, 84, 148, 149], "num_dim": [24, 41, 94, 97, 101, 148, 149, 150, 152], "zlower": 24, "yupper": [24, 150, 164], "zupper": 24, "upper": [24, 34, 35, 41, 49, 92, 94, 101, 142, 148, 150, 152, 162, 164], "mxnest": 24, "neg": [24, 42, 144, 151, 162, 164], "ins": 24, "forc": [24, 27, 43, 48, 66, 70, 109, 115, 130, 141, 144, 149, 159, 164, 165], "prohibit": 24, "again": [24, 43, 66, 70, 75, 82, 84, 88, 89, 98, 102, 107, 111, 127, 133, 162, 165], "2d_grid": 24, "attirbut": 24, "gridlines_show": 24, "grideges_show": 24, "openli": 25, "super": [25, 30, 127, 164], "util": [25, 27, 30, 37, 48, 55, 77, 81, 84, 96, 111, 116, 118, 147, 163, 164, 165], "graphic": [25, 30, 56, 71, 81, 135], "visual": [25, 26, 30, 36, 38, 39, 47, 48, 61, 62, 71, 77, 78, 81, 96, 100, 101, 111, 118, 123, 130, 168], "web": [25, 27, 30, 38, 39, 55, 58, 59, 127, 153, 164], "latest": [25, 27, 46, 55, 58, 59, 61, 62, 90, 99, 105, 118, 120, 124], "legaci": [25, 59, 62], "welcom": [26, 86], "answer": 26, "question": [26, 30, 51, 103], "slack": 26, "channel": [26, 45], "workspac": [26, 71, 106], "join": [26, 82], "experi": [26, 52, 104, 137, 154], "warn": [26, 30, 97, 98, 104, 118, 132, 148, 165], "activ": [26, 34, 36, 41, 58, 104, 113, 151], "gitter": 26, "post": [26, 27, 28, 30, 36, 55, 99, 133, 134, 135, 148, 153], "ask": 26, "twitter": 26, "rais": [26, 32, 62, 97, 103, 105, 109, 158, 164], "photo": [26, 27], "ve": [26, 90, 105, 108], "fork": [26, 58, 59], "track": [26, 27, 30, 34, 35, 36, 47, 48, 55, 58, 60, 62, 76, 88, 96, 109, 116, 119, 128, 130, 133, 135, 141, 158], "youtub": [26, 113, 130], "video": [26, 113, 130], "introductori": 26, "webinar": 26, "csdm": 26, "2019": [26, 56, 128, 129, 130, 138], "randi": [26, 32, 92, 94], "plan": [26, 30, 52, 60, 61, 62, 68, 97, 104, 136, 158], "schedul": 26, "2020": [26, 27, 58, 65, 110, 113, 130, 131, 132, 138, 140], "annual": 26, "meet": 26, "took": 26, "onlin": [26, 110, 114, 127, 155, 162], "covid": 26, "four": [26, 72, 94, 115, 116], "short": [26, 49, 52, 101, 132], "slide": 26, "tulan": 26, "clifford": 26, "lectur": 26, "april": [26, 130, 131, 138], "minisymposterium": 26, "cse": 26, "confer": 26, "februari": [26, 126, 132, 133, 138], "boulder": 26, "2015": [26, 59, 102, 123, 124, 125, 138], "summari": [26, 27, 45, 59, 127, 148, 149, 150, 151], "tackl": [26, 30], "progress": [26, 30, 104, 113, 118, 123, 162, 164], "held": [26, 52], "zoom": [26, 55], "conjunct": [26, 42, 70, 97, 115], "23": [26, 130, 131, 138, 149], "25": [26, 34, 42, 45, 57, 70, 75, 88, 94], "28": [26, 122, 123, 126, 127, 128, 129, 130, 138], "unives": 26, "colorado": 26, "immedi": [26, 52, 71, 88, 90, 91, 98], "august": [26, 127, 135, 136, 138], "utah": 26, "hpc": 26, "swag": 26, "introduct": 27, "commit": [27, 32, 54, 58, 59, 116], "licens": [27, 48, 52, 96, 114, 127], "cite": [27, 59, 61, 138], "fund": [27, 60, 96], "troubleshoot": [27, 60, 61, 96], "amazon": 27, "servic": [27, 65, 86], "ec2": 27, "ami": 27, "77": [27, 67, 107], "statist": [27, 124], "b4run": [27, 131], "sytl": [27, 36, 81], "checkpoint": [27, 47, 118, 124, 125, 127, 129, 132, 148, 150, 152], "share": [27, 28, 55, 62, 76, 78, 94, 97, 99], "gpu": [27, 129], "cautionari": [27, 48, 67, 151], "registr": [27, 48, 127, 162, 164], "earth": [27, 42, 48, 51, 56, 63, 70, 75, 123, 125, 133, 142, 151], "slip": [27, 32, 48, 49, 114, 162, 166], "sea_level": [27, 34, 42, 48, 52, 63, 102, 130, 144, 151, 162, 164], "eta": [27, 32, 36, 37, 42, 47, 48, 72, 115, 123, 130, 143, 151], "lagrangian": [27, 47, 48, 130], "particl": [27, 36, 47, 48, 130, 135], "friction": [27, 48, 52, 151, 156, 157], "fgout": [27, 34, 47, 48, 63, 72, 135, 137, 151], "nearshor": [27, 34, 36, 47, 48, 52], "front": [27, 34, 41, 42, 48, 71, 103, 109, 142], "geometri": [27, 32, 49, 75, 96, 97, 101, 103, 106, 123], "jupyt": [27, 46, 48, 75, 78, 96, 110, 114, 123, 124, 130, 140], "notebook": [27, 32, 34, 42, 46, 48, 58, 70, 75, 78, 90, 96, 98, 114, 123, 124, 130, 140, 141, 142, 164], "concept": [27, 140], "pointwis": [27, 34, 57, 106, 123, 162], "potenti": [27, 71, 125, 143], "fly": 27, "commun": [27, 55, 86, 106, 109, 111, 115, 127], "hope": [28, 116], "greatli": [28, 36, 86, 118, 135, 143], "submodul": [28, 30, 56, 59, 61], "stai": [28, 34], "annot": [29, 63], "map2d_to_1d": 29, "unavail": 29, "sens": [29, 55, 64, 127, 132, 170], "context": [29, 55, 167], "plotdata": [29, 36, 37, 47, 82, 84, 91, 118, 124, 125, 147], "els": [29, 30, 62, 70, 106, 127, 142, 144, 152], "scalar": [29, 32, 42, 98, 106, 140, 144, 148, 170], "moment": [29, 32, 128], "outn": 29, "outaux": 29, "prepar": 30, "substanti": [30, 58, 86, 123, 129, 132], "incompat": [30, 55], "built": [30, 31, 49, 68, 78, 87, 96, 99, 101, 103, 115, 116, 156, 157], "correctli": [30, 34, 89, 95, 123], "Be": [30, 71, 143, 166], "verbos": [30, 32, 35, 37, 51, 63, 70, 91, 94, 98, 104, 116, 142, 148, 150, 152, 158, 164], "messag": [30, 43, 51, 58, 62, 71, 76, 91, 94, 98, 100, 103, 104, 106, 107, 118, 132, 148, 150, 152, 165], "wise": [30, 104], "especi": [30, 55, 89, 101], "necessit": 30, "modif": [30, 43, 65, 71, 82, 86, 92, 151], "compat": [30, 32, 35, 51, 55, 63, 75, 77, 81, 97, 99, 107, 120, 121, 125, 126, 136, 164], "explan": 30, "tracker": 30, "increasingli": 30, "push": [30, 58, 59], "unlik": [30, 34, 58, 59, 77], "accid": 30, "subrepositori": [30, 59], "oppos": [30, 159], "inter": [30, 126], "proceed": [30, 58], "txt": [30, 34, 47, 54, 59, 64, 86, 98, 118, 125, 126, 127, 139, 158], "isol": [30, 62], "editabl": 30, "site": [30, 55, 62, 111], "pull_al": [30, 59], "sh": [30, 58, 59, 99], "prompt": [30, 31, 71, 82, 84, 93, 96, 108, 164], "shortli": [30, 116], "handi": [30, 66], "uncommit": [30, 54, 59], "checkout": [30, 56, 58, 59, 61], "claw_git_statu": [30, 54, 59, 131], "claw_git_diff": [30, 54, 59], "usernam": [30, 31], "mind": 30, "password": 30, "whenev": [30, 124, 167], "brought": 30, "new_featur": 30, "accident": [30, 82], "recov": [30, 35], "histori": [30, 37, 59, 62, 84], "throw": [30, 137], "awai": [30, 143], "recreat": [30, 43, 66, 130], "rebas": 30, "onto": [30, 32, 55, 144, 164], "newer": [30, 76, 92, 127], "head": [30, 32, 58], "cleaner": [30, 125], "recompil": [30, 43, 44, 66, 76, 109, 118, 130, 149, 167], "nosetest": [30, 39, 40, 99, 105, 116, 160], "fail": [30, 97, 99, 109, 116, 123, 158], "pr": [30, 59, 116, 127], "someon": [30, 66], "propos": [30, 170], "rid": 30, "cross": [30, 49], "poor": 30, "whole": [30, 55, 98, 99], "lot": [30, 42, 118, 130], "doesn": [30, 34, 62, 67, 106], "pep8": 30, "aim": 30, "vim": 30, "nice": [30, 63, 89, 101, 120, 142], "underlin": 30, "nose": [30, 39, 40, 87, 99, 116, 136, 160], "suit": [30, 55, 116], "exactli": [30, 35, 36, 54, 56, 72, 106, 142, 148], "overrid": [30, 44, 55, 88, 89, 109], "bind": [30, 55, 81, 89, 99], "dockerhub": [31, 59], "riemann_book": [31, 141], "0_dockerimag": 31, "8889": 31, "0_contain": 31, "serv": 31, "jovyan": 31, "exit": [31, 82, 99, 105], "ctrl": [31, 82], "quit": [31, 71, 82, 84, 154], "whatev": [31, 88, 103, 140], "ip": [31, 82, 84], "localhost": 31, "token": 31, "wherev": [31, 165], "ones": [31, 88, 89, 106, 127, 148, 149], "ipynb": [31, 32, 34, 42, 75, 114, 124, 141, 142], "chile2010a": [31, 114], "exercis": [31, 48, 114, 116], "transfer": 31, "laptop": [31, 96], "accomplish": [31, 42, 66], "0_geoclaw_dockerimag": 31, "contains": 31, "rm": [31, 58, 59, 66, 165], "1_contain": 31, "rmi": 31, "1_dockerimag": 31, "prune": 31, "dockeril": 31, "root": [31, 62, 97, 98, 103], "dockerfile_v5": 31, "0_geoclaw": 31, "test_bind": 31, "subfault": [32, 48, 127, 128, 166], "seafloor": [32, 52, 75, 144, 166], "rise_tim": [32, 75], "rise": [32, 75, 143, 144], "rise_time_start": [32, 75], "piecewis": [32, 34, 42, 47, 49, 57, 72, 75, 120, 140, 142, 162], "quadrat": [32, 75], "rise_time_end": [32, 75], "rise_fract": [32, 75], "csv": [32, 75, 127], "erron": [32, 75], "dtopotools_exampl": [32, 75, 114], "test_dtopotool": 32, "deal": [32, 52, 81, 98, 99, 106, 158, 164], "sub": [32, 116, 164], "dtopographi": [32, 75], "ucsbfault": [32, 75], "csvfault": [32, 75], "siftfault": [32, 75, 127], "segmentedplanefault": [32, 75], "fault1d": 32, "subfault1d": 32, "dtopography1d": 32, "plot_dz_contour": 32, "plot_dz_color": 32, "mw": [32, 127], "strike_direct": 32, "input_unit": 32, "coordinate_specif": [32, 75], "subclass": 32, "row": [32, 34, 57, 92, 115, 162, 164], "rupture_typ": [32, 75], "static": [32, 75, 127], "dtopo_typ": [32, 35, 49, 63, 75], "repres": [32, 49, 88, 94, 97, 101, 102, 104, 106, 164, 170], "dz_at_t": 32, "dz": [32, 35, 49, 144, 162], "dz_max": 32, "ab": [32, 56, 101, 109, 115, 142, 164], "self": [32, 35, 37, 104, 136, 164], "cmax_dz": 32, "dz_interv": 32, "colorbar_ticks": 32, "colorbar_labels": 32, "fig_kwarg": [32, 164], "appar": [32, 72, 76], "dz_cellave_at_t": 32, "compos": [32, 88], "mo": 32, "seismic": [32, 37, 48, 75], "containing_rect": 32, "create_dtopo_xi": [32, 75], "rect": [32, 142], "016666666666666666": 32, "buffer_s": [32, 75], "buffer": [32, 42, 47, 115, 124, 125, 149, 150, 164], "x1": [32, 34, 35, 36, 41, 51, 63, 89, 98, 115, 142, 149, 150, 151, 164], "x2": [32, 34, 35, 36, 41, 51, 63, 98, 115, 142, 149, 150, 151, 164], "y1": [32, 34, 35, 36, 41, 51, 63, 89, 98, 115, 142, 149, 150, 151, 164], "y2": [32, 34, 35, 36, 41, 51, 63, 98, 115, 142, 149, 150, 151, 164], "create_dtopographi": [32, 75], "valueerror": [32, 158, 164], "plot_subfault": 32, "plot_centerlin": 32, "slip_color": 32, "cmap_slip": 32, "cmin_slip": 32, "cmax_slip": 32, "slip_tim": 32, "plot_rak": 32, "xylim": 32, "plot_box": [32, 164], "axessubplot": 32, "centroid": [32, 75], "dip": [32, 49, 75], "jet": [32, 71], "rake": [32, 75], "drawn": [32, 55, 147], "plot_subfaults_depth": 32, "column_map": 32, "skiprow": 32, "delimit": 32, "dict": [32, 37, 91, 97, 102, 103, 106, 158, 164], "strike": [32, 75], "calculate_geometri": 32, "kinemat": [32, 48], "skip": [32, 130], "width": [32, 36, 49, 55, 63, 75, 77, 94, 101, 106, 115, 142, 150, 152], "rigid": [32, 127], "mu": [32, 127], "set_dynamic_slip": 32, "slip_at_dynamic_t": 32, "column_list": 32, "output_unit": 32, "adopt": [32, 104], "Not": [32, 55, 94, 125, 132], "noaa": [32, 42, 51, 57, 70, 75, 127, 143, 158, 162, 166], "sift": [32, 75, 127], "ucsb": [32, 75, 166], "definit": [32, 71, 88, 115, 122], "gov": [32, 42, 51, 70, 75, 99, 158], "aboutu": 32, "020204mag_polici": 32, "php": [32, 65, 86], "sift_slip": 32, "longitude_shift": 32, "subset": [32, 34, 42, 70, 127, 142, 162, 164, 166], "load_sift_unit_sourc": 32, "pmel": [32, 75], "pub": [32, 158], "gica2937": 32, "although": [32, 55, 67, 71, 100, 101, 103, 115, 128, 134, 164], "notat": [32, 51, 63, 140], "compress": [32, 97, 164], "info_sz": 32, "dat": [32, 158], "acsza1": 32, "acszb1": 32, "set_subfault": 32, "assign": [32, 34, 36, 88, 91, 97, 103], "coodin": 32, "pascal": [32, 158], "centerlin": 32, "respecitv": 32, "mix": [32, 41, 55, 75], "nctr": [32, 75], "upstrik": [32, 75], "updip": [32, 75], "calculate_geometry_triangl": 32, "triangular": [32, 48, 127], "lat": [32, 51, 55, 57, 63, 162, 164], "convert_to_standard_unit": 32, "measur": [32, 47, 49, 51, 75], "dynamic_slip": [32, 128], "rupture_tim": [32, 75], "rise_shap": 32, "gauss_pt": 32, "latitutd": 32, "modulu": [32, 102, 108, 150, 167], "shape": [32, 37, 42, 51, 63, 70, 89, 94, 97, 99, 106, 142, 164], "displac": [32, 36, 48, 49, 52, 75, 144, 151, 166], "1992": 32, "okadamap": 32, "rigin": 32, "dave": 32, "xiaom": 32, "wang": 32, "rewritten": 32, "dicuss": 32, "movement": 32, "sec": 32, "pw": [32, 34], "smooth": [32, 72, 104, 115, 167], "ruptur": [32, 48], "set_corn": 32, "projection_zon": 32, "iter": [32, 42, 70, 102], "1000000": 32, "x0": [32, 51], "orthogon": 32, "subdividedplanefault": 32, "base_subfault": 32, "nstrike": 32, "ndip": 32, "slip_funct": 32, "subdivid": [32, 75], "uniform": [32, 34, 36, 37, 48, 70, 75, 78, 89, 127, 162], "subdivis": 32, "slip_distribut": 32, "xi": [32, 167], "rescal": 32, "tensorproductfault": 32, "fault_plan": 32, "slip_along_strik": 32, "slip_down_dip": 32, "goe": [32, 48, 58], "constant": [32, 34, 36, 49, 52, 63, 68, 72, 99, 102, 140, 141, 142, 144, 151, 164, 167], "tensor": 32, "chen": [32, 166], "ji": [32, 166], "geol": 32, "edu": [32, 55, 97, 129], "faculti": 32, "big_earthquak": 32, "sea": [32, 47, 48, 50, 52, 55, 72, 75, 112, 123, 130, 143, 162, 164, 166], "floor": [32, 48, 75], "durat": [32, 132, 143], "slope": [32, 104, 132], "rf": [32, 58, 59], "bear": [32, 51, 118], "movabl": 32, "latlong": [32, 55], "happen": [33, 55, 66, 88, 103, 106, 130, 165], "filenam": [33, 55, 123, 135, 136, 164], "fgmax_tool": [34, 122, 130, 136, 151], "increment": [34, 47, 55, 94, 109, 148, 150, 152], "record": [34, 45, 47, 64, 106, 138, 158, 166], "observ": [34, 52, 119, 132, 143, 148, 151, 159, 166], "align": [34, 36, 42, 55, 63, 70, 130, 132, 151], "arbitrari": [34, 36, 63, 104, 119, 142, 151], "transect": [34, 51, 63, 118, 151], "coastlin": [34, 55, 70, 72, 130, 142, 151, 166], "quadrilater": [34, 63], "dem": [34, 48, 57, 63, 127, 162, 164, 166], "topo_typ": [34, 42, 49, 57, 63, 70, 123, 124, 127, 130, 162, 164], "point_styl": [34, 35, 70, 122], "fgmax_grid": [34, 35, 63, 130, 136, 151], "junction": 34, "purpos": [34, 36, 48, 52, 57, 65, 71, 77, 86, 94, 114, 116, 139, 142, 148], "maxima": [34, 76], "fgmax_data": [34, 151], "fgmaxgrid": [34, 35, 136, 151], "fgmax0001": 34, "fgno": [34, 35, 36, 37, 136], "sequenti": [34, 36], "fg_maxnum_fgrid": 34, "fgmax_modul": 34, "recomil": 34, "everyth": [34, 59, 62, 76, 99, 108, 109, 116, 127], "fg": 34, "tstart_max": 34, "tend_max": 34, "dt_check": 34, "min_level_check": 34, "arrival_tol": 34, "interp_method": 34, "npt": [34, 51], "xy_fil": 34, "regular": [34, 164], "cartesian": [34, 50, 63, 89, 151], "nx": [34, 36], "ny": [34, 36], "n12": 34, "n23": 34, "x3": [34, 63, 98], "y3": [34, 63, 98], "x4": [34, 63], "y4": [34, 63], "fourth": [34, 57], "perimet": 34, "intersect": [34, 49, 70, 75], "connect": [34, 49, 51, 58, 63, 70, 118, 130, 142], "expect": [34, 72, 102, 108, 109, 110, 116, 127, 128, 130, 132, 150, 151, 152, 158], "topofil": [34, 35, 49, 57, 63, 127, 128, 129, 130, 151, 162, 164], "south": [34, 49, 162], "preprocess": [34, 123], "satisfi": [34, 42, 70, 104, 115, 142, 170], "captur": [34, 47, 52, 64, 142, 162], "posit": [34, 42, 55, 75, 78, 109, 151, 162, 164], "digit": [34, 36, 42, 57, 63, 64, 82, 125, 126, 127, 164], "correspondingli": 34, "1e9": [34, 41, 64], "simul": [34, 38, 39, 40, 42, 50, 52, 55, 71, 72, 91, 94, 96, 98, 99, 101, 105, 108, 113, 125, 126, 127, 129, 142, 144, 158], "exce": [34, 55, 115, 149], "care": [34, 42, 48, 99], "start_max": 34, "natur": [34, 49, 58, 140, 170], "discard": [34, 104], "reiniti": [34, 125], "depress": 34, "margin": [34, 48], "fgmax_valu": 34, "eta_tild": 34, "speed": [34, 36, 37, 49, 88, 92, 102, 108, 118, 125, 130, 140, 141, 148, 151, 158, 159, 164, 167, 170], "harbor": 34, "ship": 34, "ground": [34, 75, 130], "fg_num_val": 34, "num_fgmax_v": [34, 151], "govern": [34, 151], "fgmax_interpol": 34, "fgmax_interpolate0": 34, "fgmax_interp": [34, 132], "unrealist": [34, 72], "island": [34, 42, 70, 142], "65": 34, "amr_levels_max": [34, 115, 149, 150], "8000": 34, "e10": 34, "stop": [34, 76, 82, 118, 119, 127, 150, 152, 164], "20": [34, 42, 53, 55, 57, 63, 70, 79, 82, 102, 115, 149, 150, 151, 162, 164], "const": 34, "fg1": 34, "valuemax": 34, "aux1": 34, "fgmax0002": 34, "explicitli": [34, 67, 71, 96, 132, 148, 165, 170], "dealt": [34, 42], "read_output": [34, 35, 136], "paragraph": 34, "qoi": [34, 37], "2n": 34, "hmin": 34, "13": [34, 47, 161], "99999000e": 34, "99": [34, 150, 152], "never": [34, 72, 101, 106, 112, 115, 130, 142, 148, 150, 152, 165], "met": [34, 65, 86], "make_input_fil": 34, "readm": [34, 36, 58, 59, 130, 140, 146, 167], "chile2010_fgmax": [34, 36, 135], "bound": [35, 37, 89, 92, 99, 136, 142, 148, 164], "interp_dz": 35, "dtopo_path": 35, "b0": [35, 37], "event": [35, 48, 52, 63, 65, 75, 86, 143, 144, 148], "ps4_to_arrai": 35, "mask": [35, 42, 48, 53, 142, 164], "topo_styl": 35, "xy_fnam": 35, "read_fgmax_grids_data": 35, "data_fil": [35, 37], "ij": [35, 136], "xy": [35, 63, 136], "layout": [35, 58, 136], "unexpect": [35, 51, 55, 63, 66, 158], "indent": [35, 51, 63], "quot": [35, 63], "unind": [35, 63, 158], "topotool": [35, 42, 48, 51, 57, 63, 70, 120, 121, 122, 123, 124, 127, 128, 133, 136, 162, 163], "write_to_fgmax_data": 35, "fid": [35, 37], "adjust_fgmax_1d": 35, "x1_desir": 35, "x2_desir": 35, "x1_domain": 35, "x1_new": 35, "x2_new": 35, "npoint": 35, "linspac": [35, 71, 91, 108, 142], "fgout_tool": [36, 151], "complement": 36, "coincid": 36, "wherea": [36, 47, 55, 72, 81, 99], "occur": [36, 66, 75, 158, 159], "signific": [36, 68, 135, 138, 143, 164], "increas": [36, 37, 47, 55, 63, 76, 142, 151], "degrad": 36, "had": [36, 47, 56, 57, 125, 126, 127, 128, 132, 144], "tempor": [36, 47, 64], "seri": [36, 47, 64, 72, 158], "fact": [36, 55, 72, 97, 106, 110, 115, 144], "gauag": 36, "massless": 36, "tracer": [36, 141], "debri": 36, "fixedgrid": [36, 48, 135, 137], "carri": 36, "throughout": [36, 72, 125], "fgout_data": [36, 151], "fgout_grid": [36, 37, 63, 151], "fgoutgrid": [36, 37, 151], "runtim": [36, 109], "binary32": [36, 47, 77, 97, 135, 148, 150, 152], "200": [36, 55, 88, 108, 123, 152], "250": 36, "115": 36, "55": 36, "tstart": [36, 104], "tend": [36, 42, 104], "nout": [36, 77, 152], "37": [36, 51], "ascii": [36, 47, 57, 71, 88, 91, 98, 103, 125, 135, 136, 139, 148, 150, 152, 162, 168], "binary64": [36, 47, 77, 97, 135, 148, 150, 152], "float64": [36, 135, 148], "kind": [36, 91, 93, 98, 118, 129, 135, 140, 148], "float32": [36, 135, 148], "dump": [36, 77, 97, 135, 136, 148], "raw": [36, 97, 135, 148], "almost": [36, 148, 154], "precis": [36, 37, 44, 47, 63, 77, 89, 94, 97, 140, 148, 164], "fgout0001": 36, "t0000": [36, 71], "q0000": [36, 71, 148], "b0000": 36, "amr_level": [36, 77], "hierarchi": [36, 55, 94, 111], "file_prefix": [36, 97, 103, 135], "easier": [36, 62, 81, 125, 127, 142, 167], "manipul": [36, 47, 164], "fgframe": 36, "read_fram": [36, 37], "lazi": 36, "hss": [36, 37], "plottool": [36, 42, 70, 130], "pcolorcel": [36, 42, 70, 130, 142], "minimalist": 36, "geoplot": [36, 53, 55, 83], "cmap": [36, 42, 55, 63, 70, 82, 142, 164], "land_color": 36, "masked_wher": 36, "eta_plot": 36, "tsunami_colormap": 36, "overlap": [36, 115, 119, 120, 162], "fgout_interp": 36, "fgout_modul": 36, "unphys": 36, "intepol": 36, "fgout_writ": 36, "fgoutfram": 37, "make_fgout_fcn_xi": 37, "make_fgout_fcn_xyt": 37, "write_netcdf": 37, "read_netcdf": [37, 42, 70, 127, 128, 162, 164], "reconstruct": [37, 96, 104, 158], "read_netcdf_arrai": 37, "extract": [37, 55, 97, 136, 158, 164, 166], "print_netcdf_info": 37, "drytol": 37, "extent_cent": 37, "extent": [37, 41, 42, 52, 60, 63, 68, 70, 71, 88, 94, 106, 119, 132, 142, 162, 164], "extent_edg": 37, "read_fgout_grids_data": 37, "set_plotdata": 37, "write_to_fgout_data": 37, "get_as_arrai": 37, "rootgrp": 37, "bounds_error": 37, "fill_valu": [37, 97, 164], "nan": [37, 51, 164], "behavior": [37, 48, 58, 72, 115, 116, 124, 130, 132, 154], "regulargridinterpol": 37, "fgout1": 37, "fgout2": 37, "method_xi": 37, "method_t": 37, "linearli": 37, "fname_nc": 37, "contin": 37, "bfinal": 37, "qoi_arrai": 37, "fgout_fram": 37, "nc": [37, 42, 70, 127, 158, 162], "datatyp": 37, "f4": 37, "include_b0": 37, "include_bfin": 37, "metadata": [37, 77, 162, 164], "f8": 37, "byte": [37, 47, 77, 97], "twice": [37, 55, 139, 148], "downstream": 37, "field": [37, 47, 63, 101, 103, 106, 125, 127, 135, 158, 159], "first_test": 38, "euler_2d": [38, 40, 96, 101], "shock_bubble_interact": [38, 40, 93, 96, 105], "iplot": [38, 40, 93, 96, 99], "That": [38, 40, 42, 108, 162], "ensur": [38, 39, 40, 71, 113], "install_prerequisit": 38, "acoustics_1d_example1": [38, 39, 74], "statement": [38, 39, 71, 77, 110, 111, 118, 125, 134, 150], "troubl": [38, 39, 81, 96], "xclaw": [38, 39, 91], "plotting_makeplot": [38, 39], "fortfil": [38, 39], "install_fortran": 39, "prerequisit": [39, 40, 48, 60, 62, 118], "sv": [39, 160], "runtest": [39, 99, 160], "acoustics_1d_heterogen": [39, 160, 167], "regression_test": [39, 160], "acoustics1dheterogeneoustest": [39, 160], "acoustics_3d_heterogen": [39, 160], "acoustics3dheterogeneoustest": [39, 160], "advection_2d_annulu": [39, 160], "advection2dannulustest": [39, 160], "ran": [39, 160], "639": [39, 160], "manual": [40, 89, 98, 105, 107, 116, 160], "launch": [40, 93, 99, 100, 105], "setup": [40, 59, 88, 89, 93, 96, 99, 101, 104, 105, 106, 114, 146, 165], "regiondata": [41, 115, 150, 151], "minlevel": [41, 115, 132, 142, 149, 150, 151], "maxlevel": [41, 71, 115, 132, 142, 149, 150, 151], "clariti": 41, "ultim": 41, "flagregiondata": [41, 130], "everywher": [41, 42, 51, 68, 106, 144], "supplement": [41, 70, 153], "rundatat": 41, "region_domain": 41, "spatial_region_typ": 41, "spatial_region": 41, "restrict": [41, 55, 127, 142, 151, 162], "insid": [41, 94, 99, 103, 140, 142, 164], "trapezoid": 41, "region_trapezoid": 41, "spatial_region_fil": 41, "ruledrectangle_trapezoid": 41, "region_tool": [41, 42, 70, 130, 131, 142], "rr": [41, 70, 71, 84, 142], "ruledrectangl": [41, 70, 130, 142], "piecewiselinear": 41, "ixi": [41, 70, 140, 142], "advection_2d_flagregion": 41, "constraint": [42, 47, 142, 149, 170], "dike": [42, 70, 130, 151], "creation": [42, 82, 96, 119], "even": [42, 52, 55, 62, 65, 75, 86, 97, 109, 115, 130, 149, 150, 162, 165, 167], "inlin": [42, 141], "marching_front": [42, 70, 130], "zmin": [42, 70], "60": [42, 55, 70, 75, 76, 130, 149], "zmax": [42, 70], "40": [42, 55, 70, 77, 115, 151, 161], "land_cmap": 42, "make_colormap": [42, 70, 82], "sea_cmap": 42, "norm": [42, 63, 70, 115, 164], "add_colormap": [42, 70, 124, 130], "data_limit": [42, 70], "data_break": [42, 70, 164], "sea_cmap_dri": 42, "cmap_dri": [42, 70], "norm_dri": [42, 70], "sw": [42, 57, 70, 141], "coast": [42, 70, 115, 144, 164], "whidbei": [42, 70, 142], "maxwelton": [42, 70], "beach": [42, 70, 141], "marchingfront": 42, "region1_png": [42, 70], "imread": [42, 70], "region1": [42, 70], "46": [42, 70, 164], "38": [42, 70], "47": [42, 70, 142], "93": [42, 70, 124], "96": [42, 70], "imshow": [42, 70, 118, 164], "48": [42, 55, 70, 142], "puget": [42, 70, 142], "sound": [42, 70, 88, 102, 108, 142], "ncei": [42, 70, 143, 162, 166], "thredd": [42, 70, 162, 166], "ngdc": [42, 70, 143], "dodsc": [42, 70], "puget_sound_13_mhw_2014": [42, 70], "colorbar": [42, 63, 70, 127, 130, 142, 147, 164], "mhw": [42, 48, 52, 143, 162, 166], "wetland": [42, 70], "lake": [42, 48, 70, 144, 151, 162], "repeat": [42, 70, 84, 139, 149, 151], "wet_point": [42, 70], "select_by_flood": [42, 70], "z1": [42, 70], "z2": [42, 70], "max_it": [42, 70], "zdry": [42, 70], "masked_arrai": [42, 70, 142], "279936": [42, 70], "112": [42, 70], "59775": [42, 70], "mislead": [42, 72], "pink": [42, 63, 82, 147], "distinguish": 42, "wet": [42, 48, 70, 72, 142, 151], "mask_dri": 42, "logical_not": [42, 70], "z_dry": 42, "mask_dry_onshor": 42, "logical_and": [42, 70], "z_allow_wet": 42, "rotat": [42, 49, 53, 136], "dry_point": 42, "shorelin": [42, 55, 164], "inland": [42, 70, 151], "sum": [42, 47, 75, 98, 106, 161], "3x3": 42, "dry_points_sum": 42, "reset": [42, 44, 58, 109], "white_r": 42, "461": 42, "379": 42, "929": 42, "961": 42, "z_format": [42, 70, 164], "1i": [42, 70], "fuction": 42, "set_xyz": [42, 164], "force_dry_init_topo": 42, "_y": [42, 70, 164], "_z": [42, 70, 164], "generate_2d_coordin": [42, 70, 164], "fname_force_dry_init": 42, "864": 42, "ncol": [42, 123], "324": 42, "nrow": 42, "224599074275750e": 42, "02": [42, 63, 97, 102, 150], "793009258334999e": 42, "259259000800000e": 42, "05": [42, 92, 102], "cellsiz": [42, 57, 123, 162], "9999": [42, 57, 162, 164], "nodata_valu": [42, 164], "forcedri": [42, 151], "force_dri": [42, 63, 130], "fname": [42, 63, 132, 142, 150, 151, 152], "qinit_data": [42, 144, 151], "force_dry_list": [42, 151], "setprob": [42, 67, 150, 152, 167], "qinit_modul": 42, "filval": 42, "t_stays_dri": 42, "gotten": 42, "offer": [43, 55, 116], "Or": [43, 63, 84, 142, 164], "dot": [43, 47, 55, 63, 66, 165], "unix": [43, 74], "invis": [43, 123], "encount": [43, 55, 82, 105, 107], "catch": [43, 96], "bash": [44, 55, 61, 62, 71, 76, 99, 111, 146], "export": [44, 55, 61, 62, 71, 76, 99, 107, 146], "f77": [44, 165], "compliant": 44, "yourself": [44, 47, 61], "rerun": [44, 47, 57, 59, 62], "scan": 44, "abil": [44, 118, 123, 125, 129, 158, 164], "meant": [44, 94, 104, 158], "pedant": 44, "fbound": 44, "ffpe": 44, "trap": 44, "invalid": [44, 103], "overflow": [44, 118, 126], "optim": [44, 86, 109], "o2": [44, 76], "fopenmp": [44, 76, 109], "dnetcdf": [44, 162], "lnetcdf": 44, "netcdf4_dir": 44, "ifort": 44, "cb": 44, "cu": 44, "fpe0": 44, "ftrapuv": 44, "fp": 44, "qopenmp": 44, "omp_num_thread": [44, 76, 125, 161], "thread": [44, 76, 115, 130, 161], "2006": [45, 151], "playlist": 45, "pressur": [47, 71, 84, 98, 102, 108, 126, 127, 151, 158, 159], "tide": [47, 48, 51, 127, 143, 164], "behav": [47, 49], "difficult": 47, "clearli": [47, 52, 55, 142], "accuraci": [47, 68, 78, 150, 152], "nonphys": 47, "oscil": [47, 170], "prior": [47, 64, 65, 86, 138, 144, 150, 152, 167], "gaugedata": [47, 64, 150], "gaugeno": [47, 64, 150], "meqn": [47, 77, 140, 167], "varieti": [47, 91], "basi": [47, 71], "file_format": [47, 97, 103, 135, 158], "smallest": [47, 115, 142], "reduct": [47, 118], "display_format": [47, 64], "e15": 47, "q_out_field": 47, "aux_out_field": 47, "min_time_incr": [47, 64], "amount": [47, 52, 58], "decreas": [47, 144, 162], "effect": [47, 55, 68, 71, 94, 98, 115, 116, 143, 151, 154, 164], "turn": [47, 50, 52, 63, 79, 82, 98, 116, 124, 130, 135], "id": [47, 51, 103], "e26": 47, "16": [47, 55, 63, 75, 94, 142, 148], "e8": 47, "multilay": [47, 120, 123, 126, 127, 128], "accumul": [47, 125, 139], "intermit": [47, 125], "max_buff": [47, 125], "gauges_modul": [47, 123, 125], "distinct": [47, 125], "gauge00001": [47, 64, 125], "quickli": [47, 58, 63, 90, 125, 144, 164], "overwritten": [47, 97, 98, 125, 139, 167], "gaugexxxxx": [47, 125, 139], "monoton": [47, 148, 151], "pars": [47, 109], "gaugesolut": 47, "gauge_id": 47, "getgaug": 47, "plotfigur": [47, 82, 118, 147], "300": [47, 142], "each_gaug": 47, "1d_plot": [47, 82, 84, 147], "setgaug": [47, 124], "each_fram": 47, "plotclaw": [47, 81, 82, 84, 147], "plotgaug": 47, "loop": [47, 71, 81, 109, 115, 118, 127, 130, 132, 140, 144, 147, 148, 167], "cleargaug": 47, "_output_from_previous_run": 47, "2d_pcolor": [47, 55], "addgaug": 47, "plot_gauge_loc": 47, "format_str": 47, "ko": 47, "add_label": 47, "overview": [48, 55, 81, 117, 121, 130], "teach": [48, 52, 114], "guarante": [48, 52, 104, 114], "liabil": [48, 52, 65, 86, 114], "underwat": [48, 55], "robust": [48, 127, 141, 164], "gallery_geoclaw": 48, "dtopotool": [48, 75, 121, 122, 124, 127, 128, 162, 163], "kmltool": [48, 51, 130, 131, 133, 163], "geo": [48, 68], "chile": [48, 63, 75], "2010": [48, 63, 75, 151], "dart": 48, "buoi": 48, "previous_pts_chosen": 48, "arcsecond": [48, 162], "force_dry_init": [48, 130], "topograpi": [48, 162], "wide": [49, 62, 111, 141], "insur": [49, 54, 58, 66, 84, 115, 119, 123, 149, 151, 162], "contrast": [49, 57, 142], "newli": 49, "roughli": [49, 56, 142, 161], "transit": [49, 136, 137], "sometim": [49, 62, 66, 70, 78, 82, 88, 98, 118, 127, 134, 143, 144, 151, 159, 166], "prefer": [49, 63, 99, 101, 146, 149, 158], "topo1d": 49, "1d_classic": [49, 118], "geo_data": [49, 64, 137, 151, 154], "rotation": 49, "geometr": [49, 154, 167], "spread": 49, "crater": 49, "endpoint": 49, "pole": 49, "ordinari": [49, 140], "Near": 49, "disturb": [49, 55], "decai": 49, "refocu": 49, "grid_data": 49, "grid_typ": 49, "te": 49, "nonuniform": [49, 71], "fname_celledg": 49, "nonuniform_grid_tool": 49, "make_mapc2p": 49, "deeper": [49, 142, 151, 162], "ocean_shelf_beach": 49, "topo_data": [49, 151], "topofile_path": 49, "dtopo_data": [49, 119, 151], "dtopofil": [49, 63, 75, 151], "dtopofile_path": 49, "mt": [49, 162], "okada_dtopo": 49, "dms2decim": 51, "decim": [51, 63], "dist_meters2latlong": 51, "dist_latlong2met": 51, "haversin": 51, "great": [51, 93, 118], "inv_haversin": 51, "invert": 51, "gctransect": [51, 118], "fetch_noaa_tide_data": 51, "predict": 51, "y0": 51, "bearing_unit": 51, "radian": 51, "beta": [51, 92, 104, 152], "sin": [51, 82], "longitudin": 51, "latitudin": 51, "coord": [51, 55], "negat": [51, 162], "30": [51, 55, 57, 115, 149, 151, 162], "51": 51, "span": [51, 55, 63], "station": [51, 143, 166], "begin_d": 51, "end_dat": 51, "time_zon": 51, "gmt": 51, "datum": [51, 52, 102, 143, 151, 166], "stnd": 51, "metric": 51, "cache_dir": 51, "begin": [51, 63, 94, 98, 102, 108, 141, 158], "op": 51, "api": [51, 127], "tidesandcurr": 51, "scratch": [51, 70, 108], "charact": 51, "datetim": [51, 158], "date_tim": 51, "ndarrai": [51, 92, 94, 102, 106, 158, 164], "water_level": 51, "preliminari": [51, 127, 166], "verifi": [51, 109, 116, 166], "rearth": 51, "6367500": 51, "pm": 51, "tohoku": 51, "crescent": 51, "citi": 51, "xtran": [51, 63], "ytran": [51, 63], "142": 51, "124": 51, "41": [51, 161], "74": [51, 55], "transect2kml": [51, 63], "kml": [51, 63, 123, 125, 126, 127, 130, 131, 142], "formula": [51, 68, 144], "stackexchang": 51, "1783746": 51, "rsphere": [51, 89], "believ": [52, 110, 125, 130], "real": [52, 59, 68, 109, 140, 166], "world": [52, 68, 96, 99, 158], "intend": [52, 89, 127], "approv": 52, "nhtmp": 52, "benchmark": 52, "nthmp": 52, "awar": [52, 99], "scenario": [52, 143], "invest": 52, "learn": [52, 93, 110], "geohazard": 52, "geoscientist": 52, "expert": 52, "cautiou": 52, "sensit": [52, 68], "confirm": 52, "imposs": [52, 148], "encapsul": 52, "knowledg": 52, "inaccuraci": 52, "uncertainti": [52, 68], "subduct": [52, 75], "zone": [52, 55, 63, 149, 150], "understood": 52, "turbul": [52, 104], "bore": 52, "inaccur": 52, "becom": [52, 107, 170], "agreement": 52, "caution": 52, "empir": [52, 68], "corioli": [52, 151, 156, 157], "littl": [52, 75, 97, 143], "coriolis_forc": [52, 151], "know": [52, 62, 66, 75, 86, 113, 126, 130, 132, 140, 143, 164, 165, 166], "upward": 52, "realiti": 52, "hard": [53, 58, 76, 82, 164], "disabl": [53, 97, 105, 151], "plain": 53, "mean_latitud": 53, "hash": [54, 58, 116], "print_git_statu": 54, "git_statu": 54, "power": [55, 60, 81], "georeferenc": 55, "simultan": [55, 125], "gi": [55, 125, 162], "critic": [55, 98, 140], "decis": 55, "nevertheless": 55, "lxml": 55, "pykml": 55, "conda": 55, "pyramid": 55, "geospati": 55, "abstract": 55, "osx": [55, 85], "macport": 55, "homebrew": [55, 85], "gdal_data": 55, "gc": 55, "cv": [55, 71], "epsg": 55, "wkt": 55, "georefer": 55, "warp": 55, "anaconda": [55, 105], "gdal_test": 55, "frame0005fig1": 55, "1440": 55, "1440p": 55, "1440l": 55, "frame0005fig1_tmp": 55, "vrt": 55, "band": [55, 164], "destin": 55, "100": [55, 75, 88, 91, 94, 103, 106, 108, 124, 127, 142, 152, 164], "receiv": [55, 116], "libgdal": 55, "dylib": 55, "liblzma": 55, "xz": 55, "setplot_fil": 55, "setplot_kml": 55, "chile_2010": 55, "slider": [55, 63], "panel": 55, "chile2010": [55, 114, 115, 119, 122, 128, 162], "kml_name": 55, "kml_starttim": 55, "utc": [55, 63], "kml_tz_offset": 55, "kml_index_fnam": 55, "_googleearth": 55, "kml_user_fil": 55, "santiago": 55, "kml_publish": 55, "kml_map_topo_to_latlong": 55, "sidebar": [55, 58], "kml_timezon": 55, "japan": [55, 63], "address": [55, 58, 125], "host": 55, "kml_xlimit": 55, "kml_ylimit": 55, "kml_use_figure_limit": 55, "member": [55, 101, 103, 108], "googleearth": [55, 63], "placemark": 55, "geograph": 55, "viewabl": [55, 91], "remain": [55, 62, 101, 109, 111, 119, 156, 157, 158], "use_for_kml": 55, "120": 55, "kml_use_for_initial_view": 55, "kml_figsiz": 55, "kml_dpi": [55, 63], "kml_tile_imag": 55, "longitude_min": 55, "longitude_max": 55, "latitude_min": 55, "latitude_max": 55, "camera": 55, "size_x_inch": 55, "size_y_inch": 55, "dpi": [55, 63], "pixel": [55, 63], "qualiti": [55, 131], "backend": 55, "furthermor": [55, 108], "pseudo": [55, 71], "height": [55, 102, 164], "transpar": [55, 63], "surface_or_depth": [55, 83], "cmin": [55, 63], "googleearth_transpar": 55, "kml_colorbar": 55, "cmax": [55, 63], "kml_build_colorbar": [55, 63], "alter": 55, "occupi": 55, "contourf": [55, 81], "googleearth_lightblu": 55, "googleearth_darkblu": 55, "appeal": 55, "overlaid": [55, 63], "ridg": 55, "lighter": 55, "darker": 55, "folder": 55, "hide": [55, 71], "unalt": 55, "map_topo_to_latlong": 55, "contan": 55, "referenc": [55, 138, 143, 162], "un": 55, "unzip": 55, "zipinfo": 55, "groundoverlai": 55, "edit": [55, 58, 59, 62, 84], "entri": [55, 64, 88, 98, 109, 158], "low": [55, 70, 89, 164, 166], "unapp": 55, "8x6": 55, "1600": [55, 77], "1200": 55, "notic": [55, 65, 86, 108, 116], "stripe": 55, "plaid": 55, "neither": [55, 63, 65, 86, 125], "evenli": [55, 98], "30x30": 55, "360x360": 55, "baselin": 55, "unaccept": 55, "sharper": [55, 63], "32768": 55, "accordingli": [55, 162], "subject": [55, 70, 115, 149, 151], "round": 55, "prevent": 55, "118": 55, "116": [55, 122], "18": [55, 102, 120, 121, 138], "rcl": 55, "1200x1680": 55, "overland": 55, "flood": [55, 70, 144], "topograph": 55, "longtitud": 55, "crucial": [55, 162], "assumpt": [55, 58], "48000": 55, "17540": 55, "map_cart_to_latlong": 55, "xc": [55, 108], "yc": 55, "topo_xlim": 55, "ge_xlim": 55, "111": [55, 125], "96132553": 55, "36256443": 55, "slope_x": 55, "xp": [55, 89], "topo_ylim": 55, "17500": 55, "ge_ylim": 55, "43": 55, "79453362": 55, "95123268": 55, "slope_i": 55, "yp": [55, 89], "teton": 55, "dam": [55, 144], "collabor": [55, 153], "weight": 55, "boisest": 55, "detect": [55, 66, 97, 105, 109, 165], "clawpack_gpu": 56, "cpp": 56, "cannot": [56, 62, 97, 132, 144, 158], "comparison": 56, "motlei": 56, "1029": 56, "2019ms001635": 56, "acceler": [56, 102], "arxiv": 56, "1808": 56, "02638": 56, "tree": [56, 62, 101, 146], "geo_gpu_pap": 56, "esri": [57, 162], "wikipedia": 57, "tell": [57, 77, 82, 88, 97, 111, 116], "llcorner": [57, 162, 164], "llcenter": [57, 162, 164], "xllcenter": [57, 127, 162], "yllcenter": [57, 127, 162], "nodatavalu": [57, 162], "3000": [57, 162], "4000": [57, 162], "xllcorner": [57, 162], "yllcorner": [57, 162], "smoothli": [57, 72], "our": [57, 67, 88, 113], "represent": [57, 94, 97, 103, 109, 164], "grid_registr": [57, 164], "crop": [57, 164], "coarsen": [57, 115, 127, 128, 149, 162, 164], "subsampl": [57, 162, 166], "coarsen_method": 57, "lon": [57, 162], "md": [58, 59, 127, 146], "intersphinx": 58, "documen": 58, "retir": 58, "conf": [58, 59], "mess": 58, "ff": [58, 63], "hasn": 58, "improperli": 58, "html_theme": 58, "_theme": 58, "flask_loc": 58, "_static": 58, "clawlogo": 58, "jpg": [58, 71], "logo": [58, 126], "clawicon": 58, "ico": 58, "icon": 58, "_templat": [58, 59], "literalinclud": 58, "setaux_default": 58, "rst": [58, 59, 130], "_build1": 58, "rebuilt": 58, "rebuild": 58, "multivers": 58, "sphinxcontrib": 58, "_build": 58, "smv_branch_whitelist": 58, "cp": [58, 59, 74], "fix_links_top_level": 58, "sphinx_web": 58, "decoupl": 58, "resid": [58, 66, 94], "remak": 58, "rsync": 58, "azv": 58, "extra_fil": 58, "cname": 58, "godaddi": 58, "verbatim": 58, "recurs": [58, 59, 74, 119], "rsync_clawpack": 58, "clawdev2013": 58, "redirect": 58, "an11": 58, "geoclawdev": 58, "clawdev": 58, "offici": [59, 85, 127], "subrepo": 59, "__init__": [59, 101, 111, 136], "1rc": 59, "rc": 59, "kentzo": 59, "prefix": [59, 91, 97, 98, 103], "gzip": [59, 97, 130], "draft": 59, "gz": [59, 61], "attach": [59, 97, 106], "upstream": 59, "repo": 59, "permiss": [59, 62, 65, 86], "trickeri": 59, "temp": 59, "mv": 59, "xf": 59, "python3": [59, 111, 126, 132, 137], "sdist": 59, "dist": 59, "xzf": [59, 61], "pkg": [59, 152], "cf": [59, 162], "upload": 59, "testpypi": 59, "twine": 59, "credenti": 59, "okai": 59, "pip3": 59, "uninstal": [59, 62, 111], "dir": [59, 99, 168], "820730": [59, 138], "changes_to_mast": 59, "release_5_x_x": 59, "5_x_x": 59, "installing_pip": 59, "installing_fortcod": 59, "docker_imag": 59, "ideal": [59, 102, 143], "sept": [59, 132], "regist": 60, "untar": 61, "pythonpath": [61, 62], "pypi": [62, 97], "think": [62, 68, 70, 72, 102], "clawpack_src": [62, 111], "egg": 62, "f2py": [62, 78, 89, 96, 101, 109, 140], "installing_opt": 62, "mechan": [62, 106, 138], "fc": [62, 89, 107, 109, 118, 165], "comfort": [62, 101], "claw_vers": 62, "wrong": [62, 67, 71, 98, 111], "pth": 62, "went": [62, 141], "overlai": [63, 133], "bgr": 63, "hex": [63, 82], "00ff00": 63, "yellow": [63, 82], "deg2dm": 63, "regions2kml": 63, "outlin": [63, 71, 84, 130, 140, 147], "box2kml": 63, "quad2kml": 63, "poly2kml": 63, "line2kml": 63, "gauges2kml": 63, "marker": 63, "topo2kml": 63, "dtopo2kml": 63, "fgmax2kml": [63, 130], "fgout2kml": 63, "make_input_data_kml": 63, "pcolorcells_for_kml": [63, 130], "pcolormesh": [63, 70], "png2kml": 63, "wrap": [63, 86, 89, 94, 104, 109, 158], "ge": 63, "topo2kmz": [63, 133], "kmz": [63, 125], "offshor": [63, 68, 70, 142, 144], "kml_header": 63, "kml_footer": 63, "kml_region": 63, "kml_gaug": 63, "kml_png": 63, "kml_cb": 63, "aabbggrr": 63, "dtopo_file_nam": 63, "8888ff": 63, "f2": 63, "num_digit": 63, "trail": 63, "NOT": [63, 65, 82, 86], "cb_filenam": 63, "close_fig": 63, "nrm": 63, "kml_timespan": 63, "event_tim": 63, "tz": 63, "tscale": 63, "timespan": 63, "27t06": 63, "00": [63, 77, 150], "03": [63, 102], "27t07": 63, "04": [63, 94, 102], "daylight": 63, "dst": 63, "timezon": 63, "magic": 63, "tabl": [63, 68, 81, 97], "wisdom": 63, "00ffff": 63, "png_filenam": 63, "dpc": 63, "max_inch": 63, "sharp": 63, "x_edg": [63, 142], "y_edg": [63, 142], "allot": 63, "smear": 63, "slowli": 63, "x_inch": 63, "y_inch": 63, "dcp": 63, "x_cell": 63, "y_cell": 63, "fig": [63, 142], "png_extent": 63, "savefig": [63, 135], "construc": 63, "png_file": 63, "png_name": 63, "radio_styl": 63, "cb_file": 63, "cb_name": 63, "cb_xfrac": 63, "cb_yfrac": 63, "radio": 63, "poli": 63, "max_vertices_in_descript": 63, "quad": 63, "region00": 63, "topo_file_nam": 63, "zlim": 63, "mask_outside_zlim": 63, "eas": [63, 136], "outsiz": 63, "pyplot": [63, 141, 164], "xg": 64, "yg": 64, "stationari": [64, 162], "huge": [64, 70, 144, 162], "frequenc": [64, 75, 104], "ug": 64, "vg": 64, "dt": [64, 89, 94, 98, 104, 118, 148, 150, 152, 162, 167], "euler": [64, 96, 104, 121, 123, 126, 128, 140, 167], "gtype": 64, "particle_tool": [64, 130], "opensourc": [65, 86], "copyright": [65, 86], "reserv": [65, 86], "redistribut": [65, 86], "permit": [65, 86], "retain": [65, 86, 97], "disclaim": [65, 86], "nor": [65, 86], "endors": [65, 86], "promot": [65, 86], "BY": [65, 86], "THE": [65, 86], "holder": [65, 86], "AND": [65, 86], "AS": [65, 86], "OR": [65, 86, 158], "impli": [65, 86, 151], "warranti": [65, 86], "BUT": [65, 86], "OF": [65, 86], "merchant": [65, 86], "fit": [65, 86], "FOR": [65, 86], "IN": [65, 86], "NO": [65, 86], "shall": [65, 86], "BE": [65, 82, 86], "liabl": [65, 86], "indirect": [65, 86], "incident": [65, 86], "exemplari": [65, 86], "consequenti": [65, 86], "procur": [65, 86], "substitut": [65, 86], "loss": [65, 86], "profit": [65, 86], "busi": [65, 86], "interrupt": [65, 86], "ON": [65, 82, 86], "strict": [65, 86], "tort": [65, 86], "neglig": [65, 76, 86, 151], "aris": [65, 86, 118], "IF": [65, 86, 151], "advis": [65, 86], "SUCH": [65, 86], "isn": [66, 76, 77, 165], "bomb": [66, 76], "abort": 66, "claw_outdir": [66, 82], "regener": 66, "safer": 66, "run1": 66, "suffix": [66, 164], "conlict": 66, "advection_1d_example1": 67, "classic_1d": 67, "exclud": 67, "exclude_modul": 67, "exclude_sourc": 67, "rp1_advect": 67, "lib": [67, 111], "common_sourc": 67, "bc1": [67, 109], "claw1ez": 67, "claw1": [67, 109], "copyq1": 67, "inlinelimit": 67, "opendatafil": 67, "out1": 67, "src1": [67, 157, 167, 170], "step1": 67, "wouldn": 67, "spite": [67, 70, 111], "bc1_inflow": 67, "matter": [67, 123], "_t": 68, "cdot": [68, 101, 142], "gamma": [68, 102], "frac": [68, 102, 108, 170], "gn": 68, "gravit": [68, 102, 151, 167], "rough": 68, "terrain": 68, "seab": 68, "025": [68, 151], "enhanc": [68, 86, 127], "threshold": 68, "friction_depth": [68, 151], "runup": 68, "discov": 68, "expon": 68, "arithmet": 68, "3333": 68, "d0": 68, "inadequaci": 68, "ztopo": 70, "pt_chosen": 70, "protect": [70, 130], "levi": [70, 130, 151], "unset": [70, 115], "geq0": 70, "force_dry_arrai": 70, "prev_pts_chosen": 70, "unchosen": 70, "converg": [70, 81], "pts_chosen": [70, 142], "touch": 70, "preserv": [70, 78, 104], "zmask": 70, "subtleti": 70, "ruledrectangle_covering_selected_point": [70, 142], "stretch": [70, 164], "farther": 70, "cmap_land": 70, "cmap_sea": 70, "cmap_topo": 70, "norm_topo": 70, "cmap_sea_dri": 70, "cultu": 70, "bai": [70, 143, 166], "183": 70, "89871": 70, "steep": [70, 170], "fist": 70, "1e6": 70, "arbitrarili": 70, "06": [70, 151], "84800": 70, "augment": [70, 141], "163": 70, "94297": 70, "pts_chosen_shallow": 70, "177": 70, "249577": 70, "zshallow": 70, "pts_chosen_nearshor": 70, "znearshor": 70, "compact": [70, 162], "fname_fgmax_mask": 70, "fgmax_pts_topostyl": 70, "topo_fgmax_mask": 70, "fewer": [70, 115, 164], "121": [70, 142], "pad": 70, "xv": [70, 142], "yv": [70, 142], "925": 70, "965": 70, "69788": 70, "76005": 70, "barrier": [70, 109], "mathwork": 71, "manifold": 71, "isosurfac": 71, "border": [71, 167], "cube": 71, "matlabpath": 71, "perman": [71, 118, 130, 131, 132, 133, 134, 135, 136, 137], "pathtool": 71, "q0001": 71, "t0001": 71, "enter": [71, 97, 99, 105], "plotclaw1": 71, "plotclaw2": 71, "plotclaw3": 71, "_": [71, 82, 101, 102, 113, 164, 170], "setplot2": 71, "ye": 71, "success": [71, 103, 164, 167], "0625": 71, "keyboard": 71, "redraw": [71, 84], "setplot1": 71, "setplot3": 71, "Such": 71, "rho": [71, 102, 108, 150], "rhou": 71, "rhov": 71, "outputdir": 71, "plottyp": 71, "mq": 71, "uservari": 71, "uservariablefil": 71, "temporarili": 71, "encourag": 71, "daspect": 71, "showpatchbord": 71, "showgridlin": 71, "gridlin": 71, "drawcontourlin": 71, "caxi": 71, "shg": 71, "fstr": 71, "framenam": 71, "frame0000": 71, "dpng": 71, "aftergrid": 71, "topic": 71, "clawgraph": 71, "t0002": 71, "doubl": [71, 89, 94, 109, 140, 149], "xxxx": 71, "unpredict": 71, "clash": 71, "strongli": [71, 110], "overridden": [71, 104, 106], "nearbi": [72, 143], "delta": [72, 92, 94, 101, 104, 140, 164, 167, 170], "polynomi": [72, 140], "a_0": 72, "a_1x": 72, "a_2i": 72, "a_3xi": 72, "greatest": [72, 115], "midpoint": [72, 94], "conclud": 72, "intact": [74, 124], "newdir": 74, "moreov": 75, "superposit": 75, "halfspac": 75, "rock": 75, "km": [75, 143], "shallowest": 75, "orient": [75, 89], "downward": 75, "counterclockwis": 75, "hang": 75, "foot": 75, "closer": [75, 150], "instati": [75, 164], "450": 75, "e3": 75, "104": 75, "668": 75, "826": 75, "chile_dtopo": 75, "tt3": [75, 164], "arcminut": [75, 162], "simplifi": [75, 81, 82, 97, 116, 126, 127, 167], "recangl": 75, "translat": 75, "homogen": [75, 104, 167, 170], "steadi": [75, 162], "rare": [75, 125], "flat": 75, "isotrop": 75, "justifi": 75, "poisson": 75, "triangl": 75, "multicor": [76, 125], "stack": [76, 85, 123, 142], "omp_stacks": 76, "16m": 76, "ulimit": 76, "unlimit": [76, 97], "mac": [76, 85, 107, 116, 146], "max1d": [76, 130, 149], "amr_modul": [76, 115, 123, 129, 130], "somewhat": [76, 81, 115, 116, 125, 148], "safe": 76, "output_styl": [77, 88, 91, 98, 135, 139, 148, 150, 152], "output_t0": [77, 136, 139, 148, 150, 152], "elif": [77, 150, 152], "output_tim": [77, 98, 139, 148, 150], "1800": 77, "7200": 77, "iout": [77, 152], "timestep": [77, 91, 98, 124, 126, 148, 150, 152, 158], "ntot": [77, 152], "output_step_interv": [77, 148, 150, 152], "total_step": [77, 148, 150, 152], "postprocess": [77, 98], "editor": 77, "valout": [77, 127, 130, 136, 161], "40000000e": 77, "ngrid": 77, "naux": 77, "nghost": 77, "preceed": [77, 167], "grid_numb": 77, "00000000e": 77, "xlow": 77, "ylow": 77, "25000000e": 77, "former": [77, 82, 167], "cut": [77, 149], "b0002": 77, "decompos": [77, 140, 170], "contigu": [77, 97, 106, 142], "output_aux_compon": [77, 148, 150, 152], "axxxx": [77, 97], "output_aux_onlyonc": [77, 148, 150, 152], "reli": [78, 89, 100, 110, 125], "weno": [78, 96, 104], "rk": [78, 104], "cake": 79, "belki": 79, "shoot": [81, 96], "favorit": 81, "hood": [81, 96], "task": 81, "phoni": 82, "plotexampl": 82, "acou": 82, "add_true_solut": 82, "qtrue": 82, "add_titl": 82, "4e": 82, "iplotclaw_": 82, "plotloop": [82, 84], "mid": 82, "stream": 82, "inherit": [82, 94, 104], "belong": [82, 94, 99, 103, 106], "getcwd": 82, "_output2": [82, 84], "plu": [82, 119, 150, 152, 164], "duplic": [82, 122, 136, 139], "wider": 82, "preced": 82, "pinkfig": 82, "acquir": 82, "get_cmap": 82, "fade": 82, "yellow_red_blu": 82, "ffff00": 82, "rgb": 82, "predefin": 82, "showcolor": 82, "call_setplot": 82, "inadvertantli": 82, "resetplot": [82, 84], "spot": 82, "exam": 82, "pd": [82, 84], "attributeerror": 82, "traceback": 82, "new_plotfgur": 82, "mi": 82, "spell": 82, "debugg": 82, "pdb": 82, "ipdb": 82, "plot_topo_fil": [83, 123], "replot": 84, "vi": [84, 91], "recomput": [84, 88, 120, 129], "my_setplot_fil": 84, "xcode": 85, "python2": [85, 132, 137], "brew": 85, "maco": 85, "scipysuperpack": 85, "pypa": 85, "en": 85, "upgrad": 85, "Their": 86, "appreci": 86, "surviv": 86, "alphabet": 86, "programmat": 86, "petclaw": [86, 99, 100, 101, 103, 109, 111, 116], "jed": 86, "brown": [86, 164], "ondrej": 86, "lisandro": 86, "dalcin": 86, "pyweno": [86, 104], "mainten": 86, "interleav": [86, 102], "kristof": 86, "unterweg": 86, "peanoclaw": 86, "chanc": 86, "reprint": 86, "inhabit": 88, "sigma": 88, "omega": 88, "meshgrid": [88, 101, 142, 164], "exp": [88, 98, 108], "cosin": 88, "imped": [88, 102, 108], "problem_data": [88, 102, 103, 106, 108, 141], "cparam": [88, 106], "set_cparam": [88, 106], "sol": 88, "readi": [88, 89, 91, 105], "clawsolver1d": [88, 91, 94, 104, 108, 140], "bc": [88, 95, 101, 108, 150, 152, 161], "pick": [88, 104], "rp": 88, "acoustics_1d": [88, 96, 102, 108], "decid": [88, 104], "my_rp_modul": 88, "my_acoustics_rp": 88, "tvd": [88, 94, 104, 170], "vanleer": [88, 104, 148, 150, 152], "evolve_to_tim": [88, 104], "keep_copi": [88, 91, 98], "behaviour": 88, "count": 88, "count_from_zero": 88, "write_aux_init": [88, 91], "write_aux_alwai": [88, 91, 98], "compute_p": [88, 91], "accept": [88, 98, 104, 148], "stress": [88, 98], "mp": [88, 98, 106], "clawdata2pyclaw": 89, "aid": 89, "therefor": [89, 99, 127, 162], "reutil": 89, "inde": [89, 99], "computation": [89, 104], "intens": 89, "shallow_spher": [89, 116, 141], "heavili": 89, "succesfulli": 89, "initialize_sourc": 89, "src2": [89, 136, 154, 157, 167], "distutil": [89, 137], "dummi": [89, 104, 167], "queri": [89, 94, 109], "namespac": 89, "docstr": [89, 93, 116], "zp": 89, "num_ghost": [89, 94, 97, 101, 102, 104, 106, 140, 148, 150, 152], "dxc": 89, "dyc": 89, "intent": [89, 140], "cf2py": 89, "multidimension": [89, 96], "fortran_src_wrapp": 89, "xlowerg": 89, "ylowerg": 89, "whith": 89, "hoc": 89, "step2": 89, "step2qcor": 89, "qcor": 89, "two_d_classic_sourc": 89, "flux2": 89, "philim": 89, "output_filenam": 89, "input_filenam": 89, "sagemathcloud": 90, "sagemath": 90, "termin": [90, 146, 148, 149], "my_solv": 91, "my_initial_solut": 91, "entireti": 91, "check_valid": 91, "tradit": [91, 97], "run_data": 91, "f_file_nam": [91, 98], "f_path": 91, "compute_f": [91, 98], "densiti": [91, 98, 102, 106, 108, 149, 150, 167], "file_prefix_p": 91, "prepend": 91, "nstepout": [91, 98], "out_tim": 91, "outdir_p": 91, "output_file_prefix": [91, 98], "_pyclaw_io": 91, "output_opt": 91, "runmak": 91, "xdir": 91, "xclawcmd": 91, "savecod": 91, "viewable_attribut": 91, "cygwin": 91, "xclawerr": 91, "xclawout": 91, "dtdx": 92, "act": [92, 164], "num_wav": [92, 102, 140, 148, 150, 152], "07": [92, 102, 161], "minmod": [92, 94, 104, 148, 150, 152], "minmod_limit": 92, "superbe": [92, 148, 150, 152], "superbee_limit": 92, "van": [92, 104, 148, 150, 152], "leer": [92, 104, 148, 150, 152], "mc": [92, 99, 148, 150, 152], "mc_limit": 92, "beam": 92, "warm": 92, "frommm": 92, "albada": 92, "klein": 92, "sharpen": 92, "van_leer_klein_sharpening_limit": 92, "roe": [92, 102, 132, 140], "scheme": [92, 102], "arora": 92, "arora_ro": 92, "theta": 92, "95": [92, 105], "safeti": 92, "theta_limit": 92, "ultrabe": 92, "cfl_superbe": 92, "cfl_superbee_theta": 92, "beta_limit": 92, "hyperbe": 92, "hyperbee_limit": 92, "superpow": 92, "superpower_limit": 92, "cada": 92, "torrilhon": 92, "cada_torrilhon_limit": 92, "cada_torrilhon_limiter_nonlinear": 92, "1st": [92, 104, 148, 150, 152, 167], "upper_bound_limit": 92, "friedemann": 92, "kemm": 92, "kemm_2009": 92, "08": [92, 94, 161], "depdend": 92, "6666666666666666": 92, "epsilon": 92, "caut": 92, "use_petsc": [93, 99], "solver_typ": [93, 104], "shouldn": 93, "htmlplot": 93, "acoustics_1d_homogen": [93, 116], "love": [93, 140], "nearli": 94, "arg": [94, 103], "patch_index": 94, "add_dimens": 94, "get_dim_attribut": 94, "attr": [94, 103], "lower_glob": 94, "num_cells_glob": 94, "upper_glob": 94, "node": [94, 127], "unmap": 94, "set_printopt": 94, "doctest": 94, "roundoff": 94, "c_center": 94, "p_node": 94, "grid1d": 94, "c_centers_with_ghost": 94, "lambda": [94, 164], "xarr": 94, "p_center": [94, 108], "49": [94, 164], "81": [94, 142, 151], "add_gaug": [94, 98], "gauge_coord": 94, "ind": 94, "c_nodes_with_ghost": 94, "mark_nod": 94, "mark_cent": 94, "setup_gauge_fil": 94, "_compute_c_cent": 94, "c_node": 94, "_compute_c_nod": 94, "gauge_dir_nam": 94, "gauge_file_nam": 94, "gauge_fil": 94, "_compute_p_cent": 94, "_compute_p_nod": 94, "on_lower_boundari": 94, "on_upper_boundari": 94, "995": 94, "101": [94, 161], "centers_with_ghost": 94, "ndarrari": 94, "nodes_with_ghost": 94, "geom": [94, 106], "clawsolver2d": [94, 104], "dimensional_split": [94, 123, 148, 150, 152], "strang": [94, 104, 148, 150, 152, 167], "enabl": [94, 97, 98, 105, 109, 125], "unsplit": [94, 148, 150, 152], "transverse_wav": [94, 148, 150, 152], "no_tran": 94, "trans_inc": 94, "trans_cor": 94, "mthlim": [94, 104], "famili": [94, 104, 150, 152], "enumer": [94, 104], "lax": [94, 104, 148, 150, 152, 170], "wendroff": [94, 104, 148, 150, 152, 170], "source_split": [94, 104, 148, 150, 152, 167], "fwave": [94, 102, 104, 140], "step_sourc": [94, 101, 104], "kernel_languag": [94, 104, 109, 116], "callabl": [96, 109], "precompil": 96, "massiv": 96, "biggest": 96, "supercomput": [96, 98, 99], "rung": [96, 104], "kutta": [96, 104], "intuit": 96, "guidelin": 96, "pyflak": 96, "pylint": 96, "coverag": [96, 116], "advection_1d": [96, 102], "burger": [96, 140, 167], "burgers_1d": [96, 102], "euler_exact_1d": [96, 102], "euler_hll_1d": [96, 102], "euler_hllc_1d": [96, 102], "euler_roe_1d": [96, 102], "shallow_exact_1d": [96, 102], "shallow_fwave_1d": [96, 102, 141], "shallow_hll_1d": [96, 102, 141], "shallow_roe_1d": [96, 102, 141], "2nd": [96, 101, 104, 148, 150, 152, 167], "leveque1997": 96, "32": [97, 99, 107, 149], "netcdf3": 97, "netcdf4": [97, 162, 164], "read_": [97, 103], "write_": 97, "write_aux": [97, 103], "thoroughli": 97, "read_aux": [97, 103], "txxxx": 97, "qxxxx": 97, "read_arrai": 97, "num_var": 97, "read_patch_head": 97, "read_t": 97, "nstate": 97, "write_p": [97, 103], "write_arrai": 97, "why": 97, "bxxxx": 97, "h5py": 97, "pytabl": 97, "moin": 97, "whichev": 97, "wrapper": [97, 164], "hdfgroup": 97, "obtain5": 97, "lzf": 97, "szip": 97, "dataset": [97, 162, 164, 166], "deflat": 97, "compression_opt": 97, "filter": [97, 164], "legal": 97, "ec": 97, "nn": 97, "chunk": 97, "guess": 97, "shuffl": 97, "fletcher32": 97, "pupyner": 97, "effort": 97, "unidata": 97, "ucar": 97, "17": [97, 125, 126, 138, 167], "netcdf3_class": 97, "netcdf3_64bit": 97, "netcdf4_class": 97, "clobber": [97, 124], "zlib": 97, "complevel": 97, "fastest": [97, 105], "poorest": 97, "slowest": 97, "checksum": 97, "trigger": 97, "chunksiz": 97, "hdf": 97, "least_significant_digit": 97, "quantiz": 97, "lossi": 97, "significantli": [97, 127], "endian": 97, "big": 97, "nativ": 97, "gain": 97, "ness": 97, "_fillvalu": 97, "silent": 97, "customari": 98, "_outdir": 98, "hdf5": 98, "write_aux_int": 98, "energi": [98, 102], "trace": 98, "p_function": 98, "absolut": [98, 115, 116, 127, 149, 150], "mf": [98, 106], "elementwis": 98, "total_energi": 98, "tidal": [98, 143], "whenc": 98, "compute_gauge_valu": 98, "sent": [98, 106], "logger": [98, 106], "interac": 98, "silenc": 98, "gone": 98, "reject": [98, 104, 148], "problemat": 98, "shaheen": 98, "getlogg": 98, "setlevel": 98, "desktop": 99, "mainli": 99, "mpirun": [99, 105, 116], "ll": [99, 108], "toolkit": [99, 168], "petsc4pi": [99, 105, 106, 116], "mercuri": 99, "anl": 99, "hg": 99, "bitbucket": 99, "buildsystem": 99, "config": 99, "zsh": 99, "architectur": 99, "csh": 99, "tcsh": 99, "setenv": 99, "cc": [99, 102, 108], "gcc": [99, 105], "cxx": 99, "mpich": 99, "phase": [99, 110, 124, 130, 149], "googlecod": 99, "iinstal": 99, "cython": 99, "demo": 99, "petsc_hello_world": 99, "hello": 99, "easy_instal": 99, "serial": [99, 103, 109, 161], "certainli": 99, "importantli": 99, "ng": 99, "lowerg": 99, "addition": [99, 158], "excerpt": 99, "320": 99, "partit": 99, "html_plot": 100, "interactive_plot": [100, 108], "3rd": [101, 104, 141], "user_bc_low": 101, "custom_bc": 101, "dim": [101, 102, 104], "qbc": [101, 104, 106], "xrang": 101, "aux_bc_low": 101, "aux_bc_upp": 101, "auxbc": [101, 104, 106], "damiansra": 101, "empyclaw": 101, "maxwell_1d_homogen": 101, "mail": [101, 107], "worthwhil": 101, "impati": 101, "reaction": 101, "diffus": 101, "psi": [101, 167, 170], "dq_src": [101, 104], "shockbubbl": 101, "rp_sourc": 101, "rp_": 102, "q_l": [102, 140, 141], "q_r": [102, 140, 141], "aux_l": [102, 140], "aux_r": [102, 140], "oft": 102, "he": 102, "miscellan": 102, "amdq": [102, 140], "fluctuat": [102, 104, 170], "apdq": [102, 140], "ith": 102, "leveque_book_2002": 102, "matrix": 102, "acoustics_1d_pi": 102, "zz": [102, 108], "advection_1d_pi": 102, "u_t": [102, 108], "burgers_1d_pi": 102, "efix": [102, 141], "entropi": [102, 141], "euler_1d_pi": 102, "exact": 102, "hll": 102, "w_1": 102, "q_hat": 102, "s_1": [102, 142], "u_l": [102, 141], "c_l": 102, "lambda_roe_1": 102, "lambda_roe_2": 102, "w_2": 102, "s_2": [102, 142], "u_r": [102, 141], "c_r": 102, "heat": 102, "gamma1": 102, "hllc": 102, "q_hat_l": 102, "q_hat_r": 102, "s_m": 102, "w_3": 102, "s_3": 102, "p_r": 102, "p_l": 102, "rho_l": 102, "s_l": 102, "rho_r": 102, "s_r": 102, "e_l": 102, "e_r": 102, "aug_glob": 102, "26": [102, 135, 136, 138], "calucl": 102, "newton": 102, "shallow_1d_pi": [102, 141], "wari": 102, "grav": [102, 141], "dry_toler": 102, "ubar": 102, "h_l": [102, 141], "h_r": [102, 141], "cbar": [102, 164], "a1": 102, "delta_hu": 102, "delta_h": 102, "a2": 102, "karg": 103, "reachabl": 103, "truli": 103, "capa": 103, "is_valid": [103, 106], "ioerror": 103, "unsuccess": 103, "signitur": 103, "set_all_st": 103, "Will": 103, "start_fram": 103, "acoustics_2d": 104, "sharpclawsolver2d": 104, "expens": [104, 115, 120, 125], "galerkin": 104, "instantan": 104, "bubbl": 104, "clawsolv": [104, 140], "sharpclawsolv": 104, "superclass": 104, "t_end": 104, "sharpclawsolver1d": 104, "riemann_solv": 104, "claw_packag": 104, "sharpclawnd": 104, "semi": 104, "discret": 104, "dq": [104, 162], "ought": 104, "molsolv": 104, "lim_typ": 104, "weno_ord": 104, "17th": 104, "time_integr": 104, "ssp33": 104, "strong": [104, 110], "shu": 104, "osher": 104, "ssp104": 104, "4th": 104, "ssplmm32": 104, "multistep": 104, "ssplmm43": 104, "ssprk22": 104, "butcher": 104, "lmm": 104, "char_decomp": 104, "characterist": 104, "transmiss": 104, "tfluct_solv": 104, "tfluct": 104, "default_tfluct": 104, "aux_time_dep": 104, "cfl_desir": [104, 148, 150, 152], "cfl_max": [104, 148, 150, 152], "call_before_step_each_stag": 104, "before_step": 104, "stage": [104, 143, 144, 162, 164], "accept_reject_step": 104, "check_3rd_ord_cond": 104, "step_index": 104, "dtfe": 104, "ssplmm": 104, "posteriori": 104, "violat": [104, 164], "muct": 104, "dqdt": 104, "get_dt_new": 104, "take_one_step": 104, "update_saved_valu": 104, "check_lmm_cond": 104, "0001": 104, "max_step": 104, "500": [104, 149, 152], "get_dt": 104, "succeed": 104, "step_hyperbol": 104, "my_custom_bc": 104, "soon": 104, "bc_arrai": 104, "difficulti": [105, 107, 111], "modern": [105, 118, 127, 140], "gnu": 105, "ibm": 105, "xlf": 105, "wiki": 105, "gfortranbinari": 105, "ce": 105, "enthought": [105, 107], "canopi": 105, "live": 106, "constructor": 106, "get_aux_glob": 106, "get_auxbc_from_aux": 106, "get_q_glob": 106, "get_qbc_from_q": 106, "set_aux_from_auxbc": 106, "fortran_modul": 106, "seem": [106, 111, 130, 147, 154], "fragil": 106, "interdepend": 106, "set_num_ghost": 106, "set_q_from_qbc": 106, "gauge_data": 106, "keep_gaug": 106, "hack": 106, "stencil_width": 106, "da": 106, "stencil": 106, "worth": 106, "temporari": 106, "processor": 106, "fset": 106, "consult": 107, "g77": 107, "undefin": 107, "bash_profil": [107, 146], "academ": 107, "epd": 107, "ordinarili": 107, "kappa": [108, 170], "eqnarrai": 108, "p_t": 108, "u_x": 108, "p_x": 108, "tipe": 108, "haven": [108, 110], "deepli": 108, "acquaint": 108, "framecount": 109, "counter": [109, 164], "get_count": 109, "reset_count": 109, "set_count": 109, "new_frame_num": 109, "verifyerror": 109, "add_parent_doc": 109, "check_diff": [109, 116], "abstol": 109, "reltol": 109, "compile_librari": 109, "source_list": 109, "module_nam": 109, "interface_funct": 109, "local_path": 109, "library_path": 109, "f2py_flag": 109, "ioexcept": 109, "f95": 109, "lgomp": 109, "o3": 109, "funrol": 109, "finlin": 109, "fdefault": 109, "construct_function_handl": 109, "function_nam": 109, "func": [109, 158], "convert_fort_double_to_float": 109, "0d0": 109, "gen_vari": [109, 116], "disable_petsc": 109, "runnabl": 109, "kernel": 109, "against": [109, 116, 124, 160], "test_app": [109, 116], "unrecogn": 109, "read_data_lin": 109, "inputfil": [109, 164], "num_entri": 109, "data_typ": 109, "run_app_from_main": 109, "run_seri": 109, "fun": 109, "decor": 109, "comm_world": 109, "check_valu": [109, 116], "januari": [110, 117, 125, 138], "ceas": 110, "python3stat": 110, "howto": 110, "pyport": 110, "bewar": [111, 164], "__file__": 111, "subpackag": 111, "_subpackag": 111, "forestclaw": [111, 123], "getusersitepackag": 111, "getsitepackag": 111, "bad": [111, 116], "harm": 111, "drawback": 111, "cmdline": 111, "echo": 111, "perturb": [112, 151, 162], "workshop": [113, 130], "ik": 113, "basin": 113, "distant": [113, 115], "parameter": [113, 127, 142, 151, 158, 159], "_surge_modul": 113, "workflow": [113, 153, 158], "concentr": 113, "hurrican": [113, 158], "katrina": 113, "directorti": 113, "orlean": 113, "atcf": [113, 127, 158, 159], "chile2010b": 114, "topotools_exampl": [114, 164], "regrid_interv": [115, 149, 150], "surround": [115, 164], "escap": [115, 150], "regrid_buffer_width": [115, 149, 150], "tradeoff": 115, "clustering_cutoff": [115, 149, 150], "amrnez": 115, "undivid": 115, "q_": [115, 140, 170], "divid": [115, 148], "exceed": [115, 127], "largest": [115, 143], "suppli": [115, 158, 167, 170], "constrain": 115, "forbidden": 115, "amrflag": 115, "doflag": 115, "dontflag": 115, "adjoint_flag": 115, "tolsp": 115, "errest": 115, "anywher": 115, "wave_toler": [115, 151], "perfom": 116, "yml": 116, "_output_old": 116, "_output_new": 116, "xxdiff": 116, "opendiff": 116, "_plots_old": 116, "_plots_new": 116, "discoveri": 116, "supplementari": 116, "prime": 116, "stdout": 116, "spawn": 116, "occasion": [116, 125], "failur": [116, 128, 144], "acoustics_3d_vari": 116, "combinatori": 116, "test_acoust": 116, "comprehens": 116, "test_shallow_spher": 116, "novemb": [118, 124, 125, 137, 138], "meson": [118, 137], "sphere_sourc": [118, 136, 137, 154], "checkpt_styl": [118, 124, 139, 148, 150], "granular": 118, "clawpack_tan": 118, "imshow_norm": 118, "imshow_alpha": 118, "facet": 118, "mpeg": 118, "movi": 118, "ffmpeg": 118, "mp4_movi": 118, "movie_fign": 118, "mp4": 118, "jsanim": [118, 119, 123, 135], "gif": 118, "movie_name_prefix": 118, "chile2010_": 118, "movie_": 118, "chile2010_fign": 118, "kill": 118, "enddo": [118, 167], "storag": [118, 124, 132], "topo_modul": 118, "ntogo": 118, "di": [118, 119], "cleanup": [118, 126], "ipython_displai": 119, "underflow": 119, "nest": [119, 125, 149, 150], "refactor": [119, 120, 121, 123, 125, 126, 128, 132], "geolib": [119, 123], "dtopo_modul": 119, "movetopo": 119, "cellgridintegr": 119, "topo_upd": 119, "cellgridintegrate2": 119, "dt_max_dtopo": [119, 151], "dt_initi": [119, 148, 150, 151, 152], "juli": [120, 121, 138], "nohup": 120, "recalcul": 120, "unnecessarili": 120, "clamshel": 120, "test_topotool": [120, 164], "octob": [121, 122, 123, 129, 130, 133, 134, 136, 137, 138], "dtdx1d": 121, "dtdy1d": 121, "jsanimation_frametool": 121, "rpn2_vc_advect": 121, "dtdtopo": 122, "refinementdata": 122, "ticklabel": 122, "114": 122, "didn": 122, "glitch": 122, "nbtool": 123, "formerli": 123, "makefile_kml": 123, "extran": 123, "compare_gaug": 123, "topoplotdata": 123, "favor": [123, 127, 137, 149, 164], "riemann_tool": [123, 141], "amrlib": 123, "dumpgaug": 123, "stepgrid_dimsplit": 123, "step2x": 123, "step2i": 123, "flux2_dimsplit": 123, "step3x": 123, "step3i": 123, "step3z": 123, "flux3_dimsplit": 123, "advection_3d_swirl": [123, 161], "advection_2d_inflow": 123, "allocat": 123, "igetsp": 123, "holland_storm_modul": 123, "stommel_storm_modul": 123, "constant_storm_modul": 123, "storm_modul": 123, "friction_modul": 123, "geoclaw_modul": 123, "consolid": 123, "amr_data_show": 124, "datadir": 124, "riemann_interact": 124, "nbviewer": 124, "maojr": 124, "ipynotebook": 124, "blob": [124, 141], "interactive_test": 124, "unstabl": 124, "guard": 124, "crash": [124, 148, 149], "chk00100": 124, "tck00100": 124, "chkaaaaa": 124, "tckaaaaa": 124, "chkbbbbb": 124, "tckbbbbb": 124, "tck": 124, "chk": 124, "flush": 124, "lose": 124, "unneed": 124, "spend": 124, "inconsist": 124, "__future__": 125, "absolute_import": 125, "print_funct": 125, "capabilit": 125, "num_proc": 125, "coupl": [125, 170], "instabl": [125, 132], "transon": 125, "insidi": 125, "enlarg": 125, "june": [126, 127, 128, 129, 138], "woodward": 126, "collela": 126, "blast": 126, "219": 126, "legend_tool": 126, "legend": [126, 142], "riemann_aug_jcp": 126, "geoclaw_riemann_util": 126, "challeng": 126, "timer": 126, "gradient": [126, 170], "xllower": 127, "yllower": 127, "capabili": 127, "landfal": 127, "highli": [127, 144], "code_of_conduct": 127, "conduct": 127, "plot_timing_stat": [127, 129], "226": 127, "cumul": 127, "maxgr": 127, "rnode": 127, "listofgrid": 127, "10000": [127, 164], "resiz": 127, "10k": 127, "bndlist": 127, "amr_2d": [127, 128], "nodal": 127, "owner": 127, "lookup": 127, "rearrang": 127, "303": 127, "capabilti": 127, "hurdat": [127, 158, 159], "jma": [127, 158, 159], "ibtrac": [127, 158], "tcvital": [127, 158, 159], "wind": [127, 151, 158, 159, 164], "holland": [127, 151, 159], "1980": [127, 151, 159], "stub": 127, "establis": 127, "hwrf": [127, 151, 159], "mimic": 127, "test_etopo1": [127, 162], "etopotool": [127, 162], "etopo1": [127, 142, 143, 162, 164, 166], "gave": 127, "incorrect": [127, 128, 144, 158], "308": 127, "287": 127, "hlle": 128, "adjoint_modul": 128, "amr_1d": 128, "adjointsup_modul": 128, "robustli": 128, "maketopo": [128, 162], "typo": 128, "subprocess": 129, "staff": 129, "timing_plot": 129, "mhd": 129, "faster": [129, 130, 132, 164], "clearer": [129, 132, 133], "topo_miss": 129, "bowl": 129, "slosh": 129, "3764278": [130, 138], "among": 130, "bzip2": 130, "unpack": 130, "get_remote_fil": [130, 164], "notebook_html": 130, "nbconvert": 130, "animation_tool": [130, 131], "ride": 130, "skip_patches_outside_xylimit": [130, 132], "ruled_rectangl": 130, "lagrangian_gaug": 130, "million": 130, "set_eta_init": [130, 144], "subsid": [130, 144, 151], "uplift": [130, 144, 151], "septemb": [131, 138], "4025432": [131, 138], "weren": 131, "verbosity_regrid": [131, 149, 150], "2021": [132, 133, 134, 135, 138], "4503024": [132, 138], "memsiz": [132, 149], "implicitli": [132, 151], "rpt2_geoclaw": [132, 141], "unnecessari": 132, "prepc": 132, "thought": [132, 143], "advertis": 132, "topotyp": [132, 151, 162], "5595424": [133, 138], "rp1_shallow_hl": 133, "geotiff": 133, "decemb": [134, 135, 138], "5781749": [134, 138], "segment": [134, 142], "2022": [135, 136, 138], "7026045": [135, 138], "trucat": 135, "svg": 135, "pcolor_kwarg": 135, "286": 135, "to_jshtml": 135, "8400237": [136, 138], "claw_python": 136, "pytest": 136, "add_attribut": 136, "cmd": 136, "fgmax_fin": 136, "fgmaxdata": 136, "compabl": 136, "xxx": [137, 162], "redon": 137, "fixed_grid_data": 137, "10076317": 138, "3528429": 138, "3237295": 138, "1405834": 138, "262111": 138, "50982": 138, "tchknnnnn": 139, "chknnnnn": [139, 148, 150, 152], "nnnnn": [139, 148], "containt": 139, "restart_fil": [139, 148, 150, 152], "commenc": 139, "undesir": 139, "fashion": 139, "traffic": [140, 167], "rp1": [140, 170], "maxm": 140, "ql": 140, "qr": 140, "auxl": 140, "auxr": 140, "mwave": 140, "q_i": [140, 170], "x_": [140, 170], "ell": 140, "cal": [140, 167, 170], "p_": [140, 170], "_ptwise": 140, "rp1_ptwise": 140, "rpn2_ptwise": 140, "rpt2_ptwise": 140, "har": 140, "x_i": [140, 167, 170], "jacobian": [140, 170], "use_fwav": [140, 148, 150, 152], "my_riemann_solv": 140, "solver_nam": 140, "sole": 140, "bmatrix": 141, "graviti": [141, 151], "rp1_shallow_roe_with_efix": 141, "shallow_roe_with_efix_1d": 141, "shallow_1d": 141, "dam_break": 141, "passiv": 141, "rp1_shallow_roe_trac": 141, "shallow_roe_tracer_1d": 141, "shallow_trac": 141, "rp1_shallow_bathymetry_fwav": 141, "shallow_bathymetry_fwave_1d": 141, "sill": 141, "rpn2_shallow_roe_with_efix": 141, "rpt2_shallow_roe_with_efix": 141, "shallow_roe_with_efix_2d": 141, "shallow_2d": 141, "radial_dam_break": 141, "rpn2_shallow_bathymetry_fwav": 141, "shallow_bathymetry_fwave_2d": 141, "rpn2_shallow_spher": 141, "rpt2_shallow_spher": 141, "shallow_sphere_2d": 141, "rossby_wav": 141, "costli": 141, "rpn2_geoclaw": 141, "sw_aug_2d": 141, "rpn2_sw_aug": 141, "reval": 141, "riemann_solut": 141, "plot_phas": 141, "inclus": 142, "union": [142, 162], "y_": 142, "scriptstyl": 142, "x_c": 142, "y_c": 142, "ldot": 142, "unequ": 142, "vstack": 142, "31": 142, "zm": 142, "rrzigzag": 142, "rr2": 142, "readlin": 142, "strip": [142, 164], "nrule": 142, "000000000": 142, "admiralti": 142, "inlet": 142, "kitsap": 142, "peninsula": 142, "strait": 142, "juan": 142, "fuca": 142, "ruledrectangle_admiraltyinlet": 142, "400": 142, "851": 142, "529": 142, "036": 142, "578": 142, "577": 142, "187": 142, "623": 142, "191": 142, "684": 142, "221": 142, "755": 142, "rr_admiralti": 142, "rr_name": 142, "compactli": 142, "enforc": 142, "x_center": 142, "y_center": 142, "logical_or": 142, "edgecolor": 142, "dark": 142, "loc": [142, 164], "129": 142, "degener": 142, "vancouv": 142, "shoal": 142, "inundataion": [143, 166], "relief": [143, 166], "msl": [143, 166], "hilo": [143, 166], "feet": [143, 166], "arc": 143, "presum": 143, "vastli": 143, "fall": [143, 151], "mhhw": 143, "astronom": 143, "aht": 143, "worst": 143, "spacial": 144, "variable_eta_init": [144, 151], "nearfield": 144, "steepli": 144, "siesmic": 144, "eta_init": 144, "ever": [147, 151], "ff9999": 147, "claw_pkg": [148, 149, 150, 151, 152], "analog": [148, 149], "capa_index": [148, 150, 152], "dt_variabl": [148, 150, 152], "output_q_compon": [148, 150, 152], "unsur": 148, "lenght": 148, "dt_max": [148, 150, 152], "stiff": 148, "retak": [148, 150, 152], "contamin": 148, "500000": 148, "steps_max": [148, 150, 152], "infinit": 148, "donor": [148, 150, 152], "upwind": 148, "transmit": 148, "transport": [148, 150, 152], "tranpsort": 148, "central": [148, 158, 159], "decomposit": 148, "srcn": [148, 167], "hyperol": 148, "src_split": [148, 150, 152], "thn": 148, "harder": 148, "checkpt_tim": [148, 150], "checkpt_interv": [148, 150], "refinement_ratios_x": [149, 150], "refinement_ratios_t": [149, 150, 151], "variable_dt_refinement_ratio": [149, 151], "xleft": [149, 150], "yleft": [149, 150], "travel": 149, "pt": [149, 150], "forbiddn": 149, "omp": 149, "spent": [149, 161], "1048575": 149, "4194303": 149, "8388607": 149, "dprint": [149, 150], "eprint": [149, 150], "edebug": [149, 150], "gprint": [149, 150], "bisect": [149, 150], "nprint": [149, 150], "pprint": [149, 150], "rprint": [149, 150], "sprint": [149, 150], "tprint": [149, 150], "uprint": [149, 150], "upbnd": [149, 150], "acoustics_2d_radi": [150, 167], "assert": [150, 152], "probdata": [150, 152], "new_userdata": [150, 152], "add_param": [150, 152], "medium": [150, 167], "000000e": 150, "000000": 150, "chk00006": [150, 152], "ntime": 150, "step_interv": 150, "00000e": 150, "900000": 150, "50000": 150, "amr_level_max": 150, "auxtyp": 150, "001000e": 150, "alg": 150, "toggl": 150, "err": 150, "est": 150, "proj": 150, "__name__": [150, 152], "__main__": [150, 152], "argv": [150, 152], "setrun_setgeo": 151, "refinement_data": 151, "speed_toler": 151, "earth_radiu": 151, "6367": 151, "5e3": 151, "friction_forc": 151, "manning_coeffici": 151, "delin": 151, "manning_break": 151, "file1info": 151, "file2info": 151, "dtopotyp": [151, 162], "qinit_typ": [151, 162], "qinitfil": 151, "qinitdata": 151, "coseism": 151, "surge_data": 151, "wind_forc": 151, "drag": 151, "drag_law": 151, "deterimin": [151, 164], "garret": 151, "powel": 151, "pressure_forc": 151, "wind_index": 151, "pressure_index": 151, "display_landfall_tim": 151, "wind_refin": 151, "r_refin": 151, "storm_specification_typ": 151, "chava": 151, "lin": 151, "emmanuel": 151, "storm_fil": [151, 158], "storm_specif": 151, "classic4": 152, "tout": 152, "javascript": 153, "publicli": 153, "develp": 154, "tropic": 154, "polar": 154, "variat": 154, "circumst": 154, "src1d": 157, "src3": [157, 167], "ensembl": 158, "my_storm": 158, "my_geoclaw_storm": 158, "imd": [158, 159], "nodataerror": 158, "nhc": 158, "japanes": 158, "meterolog": 158, "indian": 158, "meteorlog": 158, "datetiem": 158, "time_offset": 158, "eye_loc": 158, "ey": [158, 159], "decimc": 158, "max_wind_spe": 158, "max_wind_radiu": 158, "central_pressur": 158, "storm_radiu": 158, "iso": 158, "wind_spe": 158, "34kt": 158, "50kt": 158, "64kt": 158, "radii": 158, "categori": 158, "categor": 158, "cat_nam": 158, "car_nam": 158, "read_atcf": 158, "read_geoclaw": 158, "human": 158, "readabl": [158, 159], "read_hurdat": 158, "aoml": 158, "hrd": 158, "data_storm": 158, "single_storm": 158, "risen": 158, "read_ibtrac": 158, "sid": 158, "storm_nam": 158, "start_dat": 158, "agency_pref": 158, "wmo": 158, "usa": 158, "tokyo": 158, "newdelhi": 158, "reunion": 158, "bom": 158, "nadi": 158, "wellington": 158, "cma": 158, "hko": 158, "ds824": 158, "td9636": 158, "td9635": 158, "neumann": 158, "mlc": 158, "v4": 158, "unnam": 158, "wmo_": 158, "wmo_ag": 158, "usa_ag": 158, "closest": 158, "read_imd": 158, "read_jma": 158, "jp": 158, "eng": 158, "rsmc": 158, "hp": 158, "eg": 158, "besttrack": 158, "e_format_bst": 158, "read_tcvit": 158, "write_atcf": 158, "write_geoclaw": 158, "max_wind_radius_fil": 158, "storm_radius_fil": 158, "forecast": 158, "redund": 158, "write_hurdat": 158, "write_imd": 158, "write_jma": 158, "write_tcvit": 158, "available_format": 158, "available_model": 158, "fill_rad_w_other_sourc": 158, "storm_targ": 158, "interp_kwarg": 158, "tri": 158, "storm_ibtrac": 158, "path_to_ibtrac": 158, "2018300n26315": 158, "storm_atcf": 158, "path_to_atcf": 158, "fill_mwr": 158, "out_path": 158, "make_multi_structur": 158, "observerd": 159, "parametr": 159, "gride": 159, "dens": 159, "profil": [159, 164], "_storm_modul": 159, "stepgrid": 161, "850": 161, "853": 161, "288e": 161, "214": 161, "552": 161, "373e": 161, "92": 161, "774": 161, "370": 161, "259": 161, "260e": 161, "108": 161, "838": 161, "414": 161, "664": 161, "301e": 161, "440": 161, "392": 161, "473": 161, "014": 161, "801": 161, "508": 161, "447": 161, "413": 161, "402": 161, "483": 161, "472": 161, "470": 161, "85": 161, "uniformli": 162, "nw": 162, "deduc": 162, "input_path": 162, "output_path": 162, "nodatav": 162, "northernmost": 162, "west": 162, "convens": 162, "subsurfac": 162, "gigabyt": 162, "remote_topo_url": [162, 164], "topo1": 162, "navd88": 162, "determine_topo_typ": 164, "create_topo_func": 164, "topo1writ": 164, "topo2writ": 164, "topo3writ": 164, "swaphead": 164, "capab": 164, "mayb": 164, "in_poli": 164, "topo_func": 164, "unstructur": 164, "topo_fil": 164, "filter_region": 164, "generate_2d_topo": 164, "rai": 164, "cast": 164, "versu": 164, "arrang": 164, "x_mask": 164, "maskedarrai": 164, "interp_unstructur": 164, "fill_topo": 164, "delta_limit": 164, "no_data_valu": 164, "buffer_length": 164, "proximity_radiu": 164, "resolution_limit": 164, "gap": 164, "griddata": 164, "delta_x": 164, "delta_i": 164, "make_shoreline_xi": 164, "shoreline_xi": 164, "segement": 164, "npy": 164, "reload": 164, "long_lat": 164, "cb_kwarg": 164, "linestyl": 164, "compens": 164, "shrink": 164, "nc_param": 164, "read_head": 164, "swap": 164, "replace_no_data_valu": 164, "replace_valu": 164, "smooth_data": 164, "ball": 164, "inf": 164, "oscillatori": 164, "header_styl": 164, "7e": 164, "infer": 164, "arcgi": 164, "asc": 164, "millimet": 164, "15e": 164, "7i": 164, "coorind": 164, "specfi": 164, "topgraphi": 164, "__________________o": 164, "fetch_topo_url": 164, "local_fnam": 164, "ask_us": 164, "get_topo": 164, "claw_topo_download": 164, "run_exampl": 164, "topo_fnam": 164, "remote_directori": 164, "zvar": 164, "return_topo": 164, "return_xarrai": 164, "band1": 164, "xarrai": 164, "xarray_d": 164, "etopo_sample_2min": 164, "0f": 164, "western": 164, "outputfil": 164, "outfil": 164, "nxpoint": 164, "nypoint": 164, "topotype1": 164, "99999": 164, "forget": 165, "whichclaw": 165, "gnufcompil": 165, "tarbal": 165, "config_fc": 165, "fcompil": 165, "printenv": 165, "154": 165, "wc": 166, "catalog": 166, "mllw": 166, "gloss": 166, "sonel": 166, "mbc": 167, "5d0": 167, "heterogen": 167, "b4stepn": 167, "advection_2d_swirl": 167, "1drad": 167, "mx1d": 167, "q1d": 167, "aux1d": 167, "reader": 168, "time_files_scanf": 168, "04d": 168, "grid_files_scanf": 168, "silo": 168, "vm": 169, "equiv": 170, "m_w": 170, "sum_": 170, "sum_p": 170, "qquad": 170, "nonconserv": 170, "eqn": 170, "claw_1dnoncon": 170, "tild": 170, "f_": 170, "kappa_i": 170}, "objects": {"": [[0, 0, 1, "", "ClawPlotAxes"], [1, 0, 1, "", "ClawPlotData"], [2, 0, 1, "", "ClawPlotFigure"], [3, 0, 1, "", "ClawPlotItem"], [1, 2, 1, "", "clearfigures"], [1, 2, 1, "", "clearframes"], [1, 2, 1, "", "getaxes"], [1, 2, 1, "", "getfigure"], [3, 2, 1, "", "getframe"], [3, 2, 1, "", "gethandle"], [1, 2, 1, "", "getitem"], [1, 2, 1, "", "iplotclaw"], [2, 2, 1, "", "new_plotaxes"], [1, 2, 1, "", "new_plotfigure"], [0, 2, 1, "", "new_plotitem"], [1, 2, 1, "", "plotframe"], [1, 2, 1, "", "printframes"], [1, 2, 1, "", "showitems"]], "clawpack.geoclaw": [[32, 1, 0, "-", "dtopotools"], [35, 1, 0, "-", "fgmax_tools"], [37, 1, 0, "-", "fgout_tools"], [63, 1, 0, "-", "kmltools"], [164, 1, 0, "-", "topotools"], [51, 1, 0, "-", "util"]], "clawpack.geoclaw.dtopotools": [[32, 0, 1, "", "CSVFault"], [32, 0, 1, "", "DTopography"], [32, 0, 1, "", "DTopography1d"], [32, 0, 1, "", "Fault"], [32, 0, 1, "", "Fault1d"], [32, 3, 1, "", "Mw"], [32, 0, 1, "", "SiftFault"], [32, 0, 1, "", "SubFault"], [32, 0, 1, "", "SubFault1d"], [32, 0, 1, "", "SubdividedPlaneFault"], [32, 0, 1, "", "TensorProductFault"], [32, 0, 1, "", "UCSBFault"], [32, 3, 1, "", "plot_dZ_colors"], [32, 3, 1, "", "plot_dZ_contours"], [32, 3, 1, "", "rise_fraction"], [32, 3, 1, "", "strike_direction"]], "clawpack.geoclaw.dtopotools.CSVFault": [[32, 2, 1, "", "read"]], "clawpack.geoclaw.dtopotools.DTopography": [[32, 2, 1, "", "dZ_at_t"], [32, 2, 1, "", "dZ_max"], [32, 2, 1, "", "plot_dZ_colors"], [32, 2, 1, "", "plot_dZ_contours"], [32, 2, 1, "", "read"], [32, 2, 1, "", "write"]], "clawpack.geoclaw.dtopotools.DTopography1d": [[32, 2, 1, "", "dZ_at_t"], [32, 2, 1, "", "dZ_cellave_at_t"], [32, 2, 1, "", "read"], [32, 2, 1, "", "write"]], "clawpack.geoclaw.dtopotools.Fault": [[32, 2, 1, "", "Mo"], [32, 2, 1, "", "Mw"], [32, 2, 1, "", "containing_rect"], [32, 2, 1, "", "create_dtopo_xy"], [32, 2, 1, "", "create_dtopography"], [32, 2, 1, "", "plot_subfaults"], [32, 2, 1, "", "plot_subfaults_depth"], [32, 2, 1, "", "read"], [32, 2, 1, "", "set_dynamic_slip"], [32, 2, 1, "", "write"]], "clawpack.geoclaw.dtopotools.SiftFault": [[32, 2, 1, "", "set_subfaults"]], "clawpack.geoclaw.dtopotools.SubFault": [[32, 2, 1, "", "Mo"], [32, 2, 1, "", "calculate_geometry"], [32, 2, 1, "", "calculate_geometry_triangles"], [32, 4, 1, "", "centers"], [32, 2, 1, "", "convert_to_standard_units"], [32, 5, 1, "", "coordinate_specification"], [32, 4, 1, "", "corners"], [32, 5, 1, "", "depth"], [32, 5, 1, "", "dip"], [32, 2, 1, "", "dynamic_slip"], [32, 4, 1, "", "gauss_pts"], [32, 5, 1, "", "latitude"], [32, 5, 1, "", "length"], [32, 5, 1, "", "longitude"], [32, 5, 1, "", "mu"], [32, 2, 1, "", "okada"], [32, 5, 1, "", "rake"], [32, 5, 1, "", "rise_shape"], [32, 5, 1, "", "rise_time"], [32, 5, 1, "", "rise_time_starting"], [32, 5, 1, "", "rupture_time"], [32, 5, 1, "", "rupture_type"], [32, 2, 1, "", "set_corners"], [32, 5, 1, "", "slip"], [32, 5, 1, "", "strike"], [32, 5, 1, "", "width"]], "clawpack.geoclaw.dtopotools.SubFault1d": [[32, 5, 1, "", "coordinate_specification"], [32, 5, 1, "", "latitude"], [32, 5, 1, "", "length"], [32, 5, 1, "", "longitude"], [32, 5, 1, "", "rake"], [32, 5, 1, "", "strike"]], "clawpack.geoclaw.dtopotools.SubdividedPlaneFault": [[32, 2, 1, "", "subdivide"]], "clawpack.geoclaw.dtopotools.UCSBFault": [[32, 2, 1, "", "read"]], "clawpack.geoclaw.fgmax_tools": [[35, 0, 1, "", "FGmaxGrid"], [35, 3, 1, "", "adjust_fgmax_1d"]], "clawpack.geoclaw.fgmax_tools.FGmaxGrid": [[35, 2, 1, "", "bounding_box"], [35, 2, 1, "", "interp_dz"], [35, 2, 1, "", "ps4_to_arrays"], [35, 2, 1, "", "read_fgmax_grids_data"], [35, 2, 1, "", "read_output"], [35, 2, 1, "", "write_to_fgmax_data"]], "clawpack.geoclaw.fgout_tools": [[37, 0, 1, "", "FGoutFrame"], [37, 0, 1, "", "FGoutGrid"], [37, 3, 1, "", "get_as_array"], [37, 3, 1, "", "make_fgout_fcn_xy"], [37, 3, 1, "", "make_fgout_fcn_xyt"], [37, 3, 1, "", "print_netcdf_info"], [37, 3, 1, "", "read_netcdf"], [37, 3, 1, "", "read_netcdf_arrays"], [37, 3, 1, "", "write_netcdf"]], "clawpack.geoclaw.fgout_tools.FGoutFrame": [[37, 4, 1, "", "B"], [37, 4, 1, "", "eta"], [37, 4, 1, "", "h"], [37, 4, 1, "", "hss"], [37, 4, 1, "", "hu"], [37, 4, 1, "", "hv"], [37, 4, 1, "", "s"], [37, 4, 1, "", "u"], [37, 4, 1, "", "v"]], "clawpack.geoclaw.fgout_tools.FGoutGrid": [[37, 4, 1, "", "X"], [37, 4, 1, "", "Y"], [37, 4, 1, "", "extent_centers"], [37, 4, 1, "", "extent_edges"], [37, 2, 1, "", "read_fgout_grids_data"], [37, 2, 1, "", "read_frame"], [37, 2, 1, "", "set_plotdata"], [37, 2, 1, "", "write_to_fgout_data"], [37, 4, 1, "", "x"], [37, 4, 1, "", "y"]], "clawpack.geoclaw.kmltools": [[63, 3, 1, "", "box2kml"], [63, 3, 1, "", "deg2dms"], [63, 3, 1, "", "dtopo2kml"], [63, 3, 1, "", "f2s"], [63, 3, 1, "", "fgmax2kml"], [63, 3, 1, "", "fgout2kml"], [63, 3, 1, "", "gauges2kml"], [63, 3, 1, "", "kml_build_colorbar"], [63, 3, 1, "", "kml_cb"], [63, 3, 1, "", "kml_png"], [63, 3, 1, "", "kml_timespan"], [63, 3, 1, "", "line2kml"], [63, 3, 1, "", "make_input_data_kmls"], [63, 3, 1, "", "pcolorcells_for_kml"], [63, 3, 1, "", "png2kml"], [63, 3, 1, "", "poly2kml"], [63, 3, 1, "", "quad2kml"], [63, 3, 1, "", "regions2kml"], [63, 3, 1, "", "topo2kml"], [63, 3, 1, "", "topo2kmz"], [63, 3, 1, "", "transect2kml"]], "clawpack.geoclaw.surge": [[158, 1, 0, "-", "storm"]], "clawpack.geoclaw.surge.storm": [[158, 6, 1, "", "NoDataError"], [158, 0, 1, "", "Storm"], [158, 3, 1, "", "available_formats"], [158, 3, 1, "", "available_models"], [158, 3, 1, "", "fill_rad_w_other_source"], [158, 3, 1, "", "make_multi_structure"]], "clawpack.geoclaw.surge.storm.Storm": [[158, 2, 1, "", "category"], [158, 2, 1, "", "read"], [158, 2, 1, "", "read_atcf"], [158, 2, 1, "", "read_geoclaw"], [158, 2, 1, "", "read_hurdat"], [158, 2, 1, "", "read_ibtracs"], [158, 2, 1, "", "read_imd"], [158, 2, 1, "", "read_jma"], [158, 2, 1, "", "read_tcvitals"], [158, 2, 1, "", "write"], [158, 2, 1, "", "write_atcf"], [158, 2, 1, "", "write_geoclaw"], [158, 2, 1, "", "write_hurdat"], [158, 2, 1, "", "write_imd"], [158, 2, 1, "", "write_jma"], [158, 2, 1, "", "write_tcvitals"]], "clawpack.geoclaw.topotools": [[164, 0, 1, "", "Topography"], [164, 3, 1, "", "create_topo_func"], [164, 3, 1, "", "determine_topo_type"], [164, 3, 1, "", "fetch_topo_url"], [164, 3, 1, "", "get_topo"], [164, 3, 1, "", "read_netcdf"], [164, 3, 1, "", "swapheader"], [164, 3, 1, "", "topo1writer"], [164, 3, 1, "", "topo2writer"], [164, 3, 1, "", "topo3writer"]], "clawpack.geoclaw.topotools.Topography": [[164, 4, 1, "", "X"], [164, 4, 1, "", "Y"], [164, 4, 1, "", "Z"], [164, 2, 1, "", "crop"], [164, 4, 1, "", "delta"], [164, 4, 1, "", "extent"], [164, 2, 1, "", "generate_2d_coordinates"], [164, 2, 1, "", "generate_2d_topo"], [164, 2, 1, "", "in_poly"], [164, 2, 1, "", "interp_unstructured"], [164, 2, 1, "", "make_shoreline_xy"], [164, 2, 1, "", "plot"], [164, 2, 1, "", "read"], [164, 2, 1, "", "read_header"], [164, 2, 1, "", "replace_no_data_values"], [164, 2, 1, "", "replace_values"], [164, 2, 1, "", "set_xyZ"], [164, 2, 1, "", "smooth_data"], [164, 2, 1, "", "write"], [164, 4, 1, "", "x"], [164, 4, 1, "", "y"], [164, 4, 1, "", "z"]], "clawpack.geoclaw.util": [[51, 3, 1, "", "bearing"], [51, 3, 1, "", "dist_latlong2meters"], [51, 3, 1, "", "dist_meters2latlong"], [51, 3, 1, "", "dms2decimal"], [51, 3, 1, "", "fetch_noaa_tide_data"], [51, 3, 1, "", "gctransect"], [51, 3, 1, "", "haversine"], [51, 3, 1, "", "inv_haversine"]], "clawpack.petclaw.geometry": [[94, 0, 1, "", "Domain"], [94, 0, 1, "", "Patch"]], "clawpack.petclaw.geometry.Domain": [[94, 5, 1, "", "dimensional_split"], [94, 5, 1, "", "fwave"], [94, 5, 1, "", "kernel_language"], [94, 5, 1, "", "mthlim"], [94, 5, 1, "", "order"], [94, 5, 1, "", "source_split"], [94, 5, 1, "", "step_source"], [94, 5, 1, "", "transverse_waves"], [94, 5, 1, "", "verbosity"]], "clawpack.petclaw.state": [[106, 0, 1, "", "State"]], "clawpack.petclaw.state.State": [[106, 4, 1, "", "F"], [106, 4, 1, "", "aux"], [106, 4, 1, "", "fset"], [106, 5, 1, "", "gauge_data"], [106, 2, 1, "", "get_aux_global"], [106, 2, 1, "", "get_auxbc_from_aux"], [106, 2, 1, "", "get_q_global"], [106, 2, 1, "", "get_qbc_from_q"], [106, 5, 1, "", "keep_gauges"], [106, 4, 1, "", "mF"], [106, 4, 1, "", "mp"], [106, 4, 1, "", "num_aux"], [106, 4, 1, "", "num_eqn"], [106, 4, 1, "", "p"], [106, 5, 1, "", "problem_data"], [106, 4, 1, "", "q"], [106, 2, 1, "", "set_num_ghost"], [106, 5, 1, "", "t"]], "clawpack.pyclaw.classic.solver": [[104, 0, 1, "", "ClawSolver"]], "clawpack.pyclaw.classic.solver.ClawSolver": [[104, 5, 1, "", "fwave"], [104, 5, 1, "", "kernel_language"], [104, 5, 1, "", "mthlim"], [104, 5, 1, "", "order"], [104, 2, 1, "", "setup"], [104, 5, 1, "", "source_split"], [104, 2, 1, "", "step"], [104, 2, 1, "", "step_hyperbolic"], [104, 5, 1, "", "step_source"], [104, 5, 1, "", "verbosity"]], "clawpack.pyclaw.controller": [[91, 0, 1, "", "Controller"]], "clawpack.pyclaw.controller.Controller": [[91, 5, 1, "", "F_file_name"], [91, 4, 1, "", "F_path"], [91, 2, 1, "", "check_validity"], [91, 5, 1, "", "compute_F"], [91, 5, 1, "", "compute_p"], [91, 5, 1, "", "file_prefix_p"], [91, 5, 1, "", "frames"], [91, 5, 1, "", "keep_copy"], [91, 5, 1, "", "nstepout"], [91, 5, 1, "", "num_output_times"], [91, 5, 1, "", "out_times"], [91, 5, 1, "", "outdir"], [91, 4, 1, "", "outdir_p"], [91, 5, 1, "", "output_file_prefix"], [91, 5, 1, "", "output_format"], [91, 5, 1, "", "output_options"], [91, 5, 1, "", "output_style"], [91, 5, 1, "", "overwrite"], [91, 2, 1, "", "plot"], [91, 5, 1, "", "plotdata"], [91, 2, 1, "", "run"], [91, 5, 1, "", "rundir"], [91, 5, 1, "", "runmake"], [91, 5, 1, "", "savecode"], [91, 5, 1, "", "solver"], [91, 5, 1, "", "tfinal"], [91, 4, 1, "", "verbosity"], [91, 5, 1, "", "viewable_attributes"], [91, 5, 1, "", "write_aux_always"], [91, 5, 1, "", "write_aux_init"], [91, 5, 1, "", "xclawcmd"], [91, 5, 1, "", "xclawerr"], [91, 5, 1, "", "xclawout"], [91, 5, 1, "", "xdir"]], "clawpack.pyclaw.fileio": [[97, 1, 0, "-", "ascii"], [97, 1, 0, "-", "binary"], [97, 1, 0, "-", "hdf5"], [97, 1, 0, "-", "netcdf"]], "clawpack.pyclaw.fileio.ascii": [[97, 3, 1, "", "read"], [97, 3, 1, "", "read_array"], [97, 3, 1, "", "read_patch_header"], [97, 3, 1, "", "read_t"], [97, 3, 1, "", "write"], [97, 3, 1, "", "write_array"]], "clawpack.pyclaw.fileio.binary": [[97, 3, 1, "", "read"]], "clawpack.pyclaw.fileio.hdf5": [[97, 3, 1, "", "read"], [97, 3, 1, "", "write"]], "clawpack.pyclaw.fileio.netcdf": [[97, 3, 1, "", "read"], [97, 3, 1, "", "write"]], "clawpack.pyclaw.geometry": [[94, 0, 1, "", "Dimension"], [94, 0, 1, "", "Domain"], [94, 0, 1, "", "Grid"], [94, 0, 1, "", "Patch"]], "clawpack.pyclaw.geometry.Dimension": [[94, 4, 1, "", "centers"], [94, 2, 1, "", "centers_with_ghost"], [94, 4, 1, "", "delta"], [94, 4, 1, "", "nodes"], [94, 2, 1, "", "nodes_with_ghost"]], "clawpack.pyclaw.geometry.Domain": [[94, 4, 1, "", "grid"], [94, 4, 1, "", "num_dim"], [94, 4, 1, "", "patch"]], "clawpack.pyclaw.geometry.Grid": [[94, 2, 1, "", "add_dimension"], [94, 2, 1, "", "add_gauges"], [94, 2, 1, "", "c_center"], [94, 4, 1, "", "c_centers"], [94, 2, 1, "", "c_centers_with_ghost"], [94, 4, 1, "", "c_nodes"], [94, 2, 1, "", "c_nodes_with_ghost"], [94, 4, 1, "", "dimensions"], [94, 5, 1, "", "gauge_dir_name"], [94, 5, 1, "", "gauge_file_names"], [94, 5, 1, "", "gauge_files"], [94, 5, 1, "", "gauges"], [94, 2, 1, "", "get_dim_attribute"], [94, 4, 1, "", "num_dim"], [94, 2, 1, "", "p_center"], [94, 4, 1, "", "p_centers"], [94, 4, 1, "", "p_nodes"], [94, 2, 1, "", "plot"], [94, 2, 1, "", "setup_gauge_files"]], "clawpack.pyclaw.geometry.Patch": [[94, 2, 1, "", "add_dimension"], [94, 4, 1, "", "delta"], [94, 4, 1, "", "dimensions"], [94, 2, 1, "", "get_dim_attribute"], [94, 5, 1, "", "level"], [94, 4, 1, "", "lower_global"], [94, 4, 1, "", "name"], [94, 4, 1, "", "num_cells_global"], [94, 4, 1, "", "num_dim"], [94, 5, 1, "", "patch_index"], [94, 4, 1, "", "upper_global"]], "clawpack.pyclaw.limiters": [[92, 1, 0, "-", "tvd"]], "clawpack.pyclaw.limiters.tvd": [[92, 3, 1, "", "arora_roe"], [92, 3, 1, "", "beta_limiter"], [92, 3, 1, "", "cada_torrilhon_limiter"], [92, 3, 1, "", "cada_torrilhon_limiter_nonlinear"], [92, 3, 1, "", "cfl_superbee"], [92, 3, 1, "", "cfl_superbee_theta"], [92, 3, 1, "", "hyperbee_limiter"], [92, 3, 1, "", "limit"], [92, 3, 1, "", "mc_limiter"], [92, 3, 1, "", "minmod_limiter"], [92, 3, 1, "", "superbee_limiter"], [92, 3, 1, "", "superpower_limiter"], [92, 3, 1, "", "theta_limiter"], [92, 3, 1, "", "upper_bound_limiter"], [92, 3, 1, "", "van_leer_klein_sharpening_limiter"]], "clawpack.pyclaw.sharpclaw.solver": [[104, 0, 1, "", "SharpClawSolver"]], "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver": [[104, 2, 1, "", "accept_reject_step"], [104, 5, 1, "", "aux_time_dep"], [104, 5, 1, "", "call_before_step_each_stage"], [104, 5, 1, "", "cfl_desired"], [104, 5, 1, "", "cfl_max"], [104, 5, 1, "", "char_decomp"], [104, 2, 1, "", "check_3rd_ord_cond"], [104, 2, 1, "", "dq"], [104, 5, 1, "", "dq_src"], [104, 2, 1, "", "dqdt"], [104, 5, 1, "", "fwave"], [104, 2, 1, "", "get_dt_new"], [104, 5, 1, "", "kernel_language"], [104, 5, 1, "", "lim_type"], [104, 5, 1, "", "num_ghost"], [104, 2, 1, "", "setup"], [104, 2, 1, "", "step"], [104, 5, 1, "", "tfluct"], [104, 5, 1, "", "tfluct_solver"], [104, 5, 1, "", "time_integrator"], [104, 2, 1, "", "update_saved_values"], [104, 5, 1, "", "weno_order"]], "clawpack.pyclaw.solution": [[103, 0, 1, "", "Solution"]], "clawpack.pyclaw.solution.Solution": [[103, 2, 1, "", "is_valid"], [103, 4, 1, "", "patch"], [103, 2, 1, "", "plot"], [103, 2, 1, "", "read"], [103, 2, 1, "", "set_all_states"], [103, 4, 1, "", "start_frame"], [103, 4, 1, "", "state"], [103, 2, 1, "", "write"]], "clawpack.pyclaw.state": [[106, 0, 1, "", "State"]], "clawpack.pyclaw.state.State": [[106, 5, 1, "", "F"], [106, 5, 1, "", "gauge_data"], [106, 2, 1, "", "get_aux_global"], [106, 2, 1, "", "get_auxbc_from_aux"], [106, 2, 1, "", "get_q_global"], [106, 2, 1, "", "get_qbc_from_q"], [106, 2, 1, "", "is_valid"], [106, 5, 1, "", "keep_gauges"], [106, 4, 1, "", "mF"], [106, 4, 1, "", "mp"], [106, 4, 1, "", "num_aux"], [106, 4, 1, "", "num_eqn"], [106, 5, 1, "", "p"], [106, 5, 1, "", "problem_data"], [106, 2, 1, "", "set_aux_from_auxbc"], [106, 2, 1, "", "set_cparam"], [106, 2, 1, "", "set_num_ghost"], [106, 2, 1, "", "set_q_from_qbc"], [106, 5, 1, "", "t"]], "clawpack.pyclaw": [[109, 1, 0, "-", "util"]], "clawpack.pyclaw.util": [[109, 0, 1, "", "FrameCounter"], [109, 6, 1, "", "VerifyError"], [109, 3, 1, "", "add_parent_doc"], [109, 3, 1, "", "check_diff"], [109, 3, 1, "", "compile_library"], [109, 3, 1, "", "construct_function_handle"], [109, 3, 1, "", "convert_fort_double_to_float"], [109, 3, 1, "", "gen_variants"], [109, 3, 1, "", "read_data_line"], [109, 3, 1, "", "run_app_from_main"], [109, 3, 1, "", "run_serialized"], [109, 3, 1, "", "test_app"]], "clawpack.pyclaw.util.FrameCounter": [[109, 2, 1, "", "get_counter"], [109, 2, 1, "", "increment"], [109, 2, 1, "", "reset_counter"], [109, 2, 1, "", "set_counter"]], "clawpack.riemann": [[102, 1, 0, "-", "acoustics_1D_py"], [102, 1, 0, "-", "advection_1D_py"], [102, 1, 0, "-", "burgers_1D_py"], [102, 1, 0, "-", "euler_1D_py"], [102, 1, 0, "-", "shallow_1D_py"]], "clawpack.riemann.acoustics_1D_py": [[102, 3, 1, "", "acoustics_1D"]], "clawpack.riemann.advection_1D_py": [[102, 3, 1, "", "advection_1D"]], "clawpack.riemann.burgers_1D_py": [[102, 3, 1, "", "burgers_1D"]], "clawpack.riemann.euler_1D_py": [[102, 3, 1, "", "euler_exact_1D"], [102, 3, 1, "", "euler_hll_1D"], [102, 3, 1, "", "euler_hllc_1D"], [102, 3, 1, "", "euler_roe_1D"]], "clawpack.riemann.shallow_1D_py": [[102, 3, 1, "", "shallow_exact_1D"], [102, 3, 1, "", "shallow_fwave_1d"], [102, 3, 1, "", "shallow_hll_1D"], [102, 3, 1, "", "shallow_roe_1D"]]}, "objtypes": {"0": "py:class", "1": "py:module", "2": "py:method", "3": "py:function", "4": "py:property", "5": "py:attribute", "6": "py:exception"}, "objnames": {"0": ["py", "class", "Python class"], "1": ["py", "module", "Python module"], "2": ["py", "method", "Python method"], "3": ["py", "function", "Python function"], "4": ["py", "property", "Python property"], "5": ["py", "attribute", "Python attribute"], "6": ["py", "exception", "Python exception"]}, "titleterms": {"clawplotax": 0, "attribut": [0, 1, 2, 3, 29, 34, 55, 82, 142], "gaug": [0, 47, 55, 64, 98, 166], "plot": [0, 3, 13, 24, 27, 34, 36, 47, 50, 53, 55, 64, 66, 71, 80, 81, 82, 83, 84, 93, 99, 100, 116, 147, 153, 165, 168], "method": [0, 1, 2, 3, 142, 170], "clawplotdata": 1, "clawplotfigur": 2, "clawplotitem": [3, 82], "special": [3, 149], "all": [3, 62, 70], "1d": [3, 8, 18], "plot_typ": 3, "1d_plot": 3, "1d_fill_between": 3, "1d_from_2d_data": 3, "2d": [3, 19, 140], "2d_contour": 3, "2d_pcolor": 3, "2d_imshow": 3, "2d_hillshad": 3, "amr": [3, 5, 6, 24, 70, 76, 115, 142, 149, 151], "colorbar": [3, 55], "about": [4, 86], "thi": [4, 58], "softwar": [4, 17], "licens": [4, 65, 86], "author": 4, "cite": [4, 96], "work": [4, 35, 37, 93, 163, 164, 167], "fund": [4, 86], "guid": [5, 30, 58, 59, 113, 114], "adjoint": 5, "flag": [5, 6, 66, 70, 115, 142, 149], "us": [5, 13, 18, 19, 27, 31, 36, 41, 52, 56, 62, 64, 67, 71, 73, 76, 78, 98, 101, 104, 107, 140, 141, 144, 147, 165, 167], "geoclaw": [5, 15, 16, 20, 24, 27, 42, 48, 49, 50, 51, 52, 53, 55, 76, 79, 83, 112, 115, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 142, 145, 151, 156, 157], "adapt": [6, 16, 27, 41], "mesh": [6, 27], "refin": [6, 16, 27, 41, 115, 151], "algorithm": [6, 17, 70, 78, 170], "ghost": 6, "cell": [6, 42, 142, 151], "boundari": [6, 16, 101, 167, 170], "condit": [6, 16, 101, 108, 167, 170], "choos": [6, 70], "initi": [6, 42, 70, 101, 108, 144, 151, 167], "finer": 6, "grid": [6, 16, 34, 35, 36, 37, 49, 57, 64, 76, 94, 151], "For": 6, "more": [6, 39, 43], "detail": [6, 7, 48], "amrclaw": [7, 8, 9, 10, 20, 27, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 149, 150, 167], "descript": [7, 48], "content": [7, 27, 30, 42, 48, 70, 82, 88, 98, 104, 116, 142], "problem": [8, 89, 101, 108, 167], "old": 8, "approach": 8, "deprec": [8, 151], "doxygen": 9, "document": [9, 11, 32, 35, 37, 51, 58, 59, 63, 96, 126, 127, 155, 164], "flowchart": 10, "applic": [11, 12, 17, 27, 28, 66, 74, 99], "convert": [11, 21, 22], "readm": 11, "rst": 11, "html": [11, 84], "code": [11, 18, 19, 27, 30, 42, 50, 61, 62, 79, 116, 165, 167], "clawcode2html": 11, "clawpack": [12, 13, 17, 20, 21, 22, 23, 24, 25, 26, 27, 31, 46, 56, 58, 59, 60, 61, 66, 78, 79, 89, 92, 104, 105, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 141, 152, 169], "repositori": [12, 20, 25, 30, 54, 58, 59, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 140], "jupyt": [12, 31, 40, 153], "notebook": [12, 31, 40, 110, 153], "submodul": 12, "exampl": [12, 19, 27, 28, 34, 36, 38, 39, 40, 42, 45, 47, 50, 55, 62, 70, 71, 74, 80, 93, 96, 99, 142], "includ": [12, 58], "amazon": 13, "web": 13, "servic": 13, "ec2": 13, "ami": 13, "find": [13, 70, 82], "launch": 13, "an": [13, 38, 39, 40, 55, 64, 70, 74, 99], "instanc": 13, "log": [13, 98], "your": [13, 30, 31, 39, 55, 99, 101, 105, 153, 160], "view": 13, "result": [13, 50, 55, 100, 153], "webpag": [13, 58, 153], "directli": [13, 36], "from": [13, 21, 22, 24, 27, 30, 32, 35, 37, 40, 42, 45, 51, 58, 63, 70, 84, 89, 93, 100, 142, 164], "transfer": 13, "file": [13, 31, 33, 34, 36, 42, 55, 57, 58, 59, 61, 67, 71, 82, 84, 116, 139, 142, 151, 162, 167], "stop": [13, 31], "creat": [13, 31, 42, 55, 59, 70, 71, 74, 88], "own": [13, 31, 101], "b4run": 14, "function": [14, 51, 63, 69, 70, 84, 98, 104, 170], "b4step": [15, 167], "default": [15, 112, 144, 145, 156, 157], "routin": [15, 24, 67, 83, 112, 145, 156, 157], "clamshel": 16, "sphere": [16, 154], "user": [16, 26, 78, 167], "defin": [16, 142], "bibliographi": 17, "paper": 17, "describ": 17, "other": [17, 20, 25, 26, 31, 34, 58, 82, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 142, 144], "refer": [17, 27, 56, 96, 110], "boussinesq": [18, 19], "solver": [18, 19, 78, 88, 96, 101, 102, 104, 108, 140, 141, 167], "One": [18, 49, 140, 141, 170], "space": [18, 19, 49, 170], "dimens": [18, 19, 49, 94, 141, 170], "makefil": [18, 19, 43, 66, 67, 101, 139], "setrun": [18, 19, 24, 47, 148, 149, 150, 151, 152], "py": [18, 19, 24, 36, 82, 111, 147, 148, 149, 150, 151, 152], "two": [19, 141], "type": 19, "dispers": 19, "equat": [19, 102, 108, 141], "The": [19, 55, 69, 70, 71, 108], "sgn": 19, "madsen": 19, "sorensen": 19, "m": 19, "prerequisit": [19, 85], "wave": [19, 140, 170], "break": 19, "switch": [19, 71], "swe": 19, "chang": [20, 24, 82, 104, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "master": [20, 30], "sinc": 20, "v5": [20, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "10": [20, 118], "0": [20, 22, 24, 31, 117, 118, 119, 120, 123, 125, 127, 128, 130, 132, 135], "ar": [20, 82, 118, 127, 128, 129, 130, 131, 132, 133, 134, 135], "backward": [20, 118, 127, 128, 129, 130, 131, 132, 133, 134, 135], "compat": [20, 118, 127, 128, 129, 130, 131, 132, 133, 134, 135], "gener": [20, 24, 32, 35, 37, 51, 58, 63, 127, 128, 129, 130, 131, 132, 133, 134, 135, 137, 151, 164], "classic": [20, 27, 38, 39, 104, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 148, 152, 160], "clawutil": [20, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "visclaw": [20, 27, 64, 81, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "riemann": [20, 27, 96, 101, 102, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 140, 141, 167], "pyclaw": [20, 24, 27, 38, 40, 62, 86, 87, 88, 89, 90, 91, 92, 93, 94, 96, 97, 98, 100, 103, 104, 105, 106, 108, 109, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 160], "4": [21, 22, 23, 24, 89, 125, 126, 138], "3": [21, 42, 70, 123, 124], "6": [21, 22, 89, 128, 129], "5": [22, 24, 31, 127], "python": [22, 84, 85, 105, 110, 111, 130, 163], "convers": 22, "tool": [22, 27, 47, 53, 64, 116, 158, 163], "x": [23, 24, 89, 138], "link": 23, "fortran": [24, 27, 33, 39, 42, 43, 44, 61, 85, 107, 116, 165, 167], "packag": [24, 62, 97, 102], "input": [24, 34, 36, 97, 148, 149], "paramet": [24, 47, 82, 84, 108, 148, 149, 151], "compon": [25, 82], "commun": [26, 30, 79], "workshop": [26, 79], "clinic": 26, "tutori": [26, 108, 110], "avail": [26, 45], "stream": 26, "upcom": 26, "recent": [26, 30], "develop": [26, 27, 30, 79], "sprint": [26, 79], "session": 26, "previou": [26, 58], "event": [26, 55], "full": 27, "tabl": [27, 96], "overview": [27, 147], "get": [27, 31, 50, 71], "start": [27, 31, 50, 113, 114], "geophys": 27, "flow": [27, 88], "visual": [27, 55], "migrat": 27, "older": 27, "version": [27, 31, 43, 54, 56, 58, 59, 62, 111], "resourc": 27, "contribut": [28, 30, 141], "current_data": [29, 84], "guidelin": 30, "report": 30, "fix": [30, 34, 36, 76, 151], "bug": 30, "instal": [30, 39, 40, 60, 61, 62, 78, 85, 96, 99, 105, 107, 111, 160, 165], "instruct": [30, 62], "clone": [30, 61], "most": 30, "github": [30, 59], "check": [30, 116], "out": [30, 70], "branch": [30, 58], "each": [30, 167], "updat": [30, 58, 59], "latest": 30, "never": 30, "commit": 30, "ad": [30, 55, 93, 101, 140], "fork": 30, "remot": 30, "modifi": [30, 67, 139], "issu": 30, "pull": 30, "request": 30, "test": [30, 39, 40, 99, 105, 116, 160], "top": 30, "level": [30, 144, 151], "git": [30, 54, 58, 61, 85], "workflow": 30, "catch": 30, "error": [30, 107], "pyflak": 30, "pylint": 30, "coverag": 30, "troubl": [30, 71, 165], "shoot": [30, 71], "tip": [30, 43, 53, 55, 99], "docker": 31, "9": [31, 135, 136, 137], "abov": 31, "contain": 31, "restart": [31, 88, 139], "run": [31, 38, 39, 40, 50, 88, 90, 93, 99, 100, 116, 148, 149, 165], "move": [31, 32, 49], "between": [31, 82], "host": 31, "machin": [31, 169], "some": [31, 82, 151, 166], "command": [31, 40, 71, 84, 93, 165], "imag": [31, 55], "dockerfil": [31, 59], "binder": 31, "dtopotool": 32, "modul": [32, 35, 37, 51, 63, 96, 109, 150, 152, 164], "topographi": [32, 42, 50, 55, 70, 151, 162, 164, 166], "auto": [32, 35, 37, 51, 63, 164], "docstr": [32, 35, 37, 51, 63, 164], "77": 33, "v": 33, "90": 33, "monitor": [34, 151], "fgmax": [34, 35, 70], "specif": [34, 36, 108, 116, 151, 158, 167], "differ": [34, 55, 62, 67, 78, 82], "point": [34, 70], "style": [34, 58, 77], "valu": [34, 88], "choic": [34, 36], "interpol": [34, 36, 72], "procedur": [34, 36], "A": [34, 36, 142], "simpl": [34, 36, 142], "process": [34, 81], "output": [34, 36, 66, 70, 71, 73, 76, 77, 88, 97, 98, 116, 139, 148, 149, 151, 165], "format": [34, 36, 77, 162], "fgmax_tool": 35, "fgout": [36, 37, 64], "setplot": [36, 71, 82, 84, 147], "produc": [36, 84], "read": [36, 42, 142], "arrai": [36, 42, 70, 77, 107], "registr": [36, 57], "fgout_tool": 37, "ipython": [40, 93], "interpret": 40, "line": [40, 84, 93, 116, 165], "specifi": [41, 64, 82, 84, 115, 147, 148, 149, 151, 167], "flagregion": 41, "rule": [41, 142], "rectangl": [41, 142], "forc": [42, 151], "dry": [42, 70, 151], "sampl": [42, 70, 150, 152], "1": [42, 70, 119, 121, 124, 126, 129, 131, 133, 136], "arcsecond": [42, 70], "dem": [42, 70], "force_dry_init": 42, "usag": 42, "intern": 42, "modif": 42, "compil": [44, 66, 107, 155, 165], "fc": [44, 146], "environ": [44, 146], "variabl": [44, 66, 101, 146], "fflag": 44, "lflag": 44, "pre": 44, "processor": 44, "ppflag": 44, "gfortran": [44, 105], "intel": 44, "book": 45, "fvmhp": 45, "youtub": 45, "video": 45, "galleri": [46, 58, 71], "locat": 47, "coordin": [49, 53, 55], "system": [49, 85], "uniform": 49, "map": [49, 55], "topograpi": 49, "data": [49, 55, 77, 147, 151, 159, 162, 164, 165, 166, 167], "dtopo": [49, 163], "set": [50, 71, 82, 84, 101, 143, 144, 146, 165], "up": [50, 101], "new": [50, 58, 74, 93, 116], "util": [51, 63, 109], "cautionari": 52, "hint": [52, 82, 110], "tsunami": [52, 55, 114, 166], "hazard": 52, "model": [52, 75, 113, 114, 166], "water": [53, 102, 141, 154], "depth": 53, "surfac": [53, 144], "elev": [53, 70, 144], "latitud": [53, 55], "longitud": [53, 55], "ax": 53, "keep": 54, "track": [54, 64], "googl": 55, "earth": 55, "basic": [55, 87, 100], "requir": [55, 167], "option": [55, 61, 84, 99, 101], "gdal": 55, "librari": [55, 67], "chile": 55, "2010": [55, 79], "need": 55, "plotdata": 55, "plotfigur": 55, "figur": [55, 82], "plotax": 55, "plotitem": 55, "overlai": 55, "addit": [55, 149, 151], "kml": 55, "kmz": 55, "tile": 55, "faster": 55, "load": 55, "remov": 55, "alias": 55, "artifact": 55, "multipl": 55, "resolut": [55, 170], "publish": 55, "gpu": 56, "netcdf": [57, 73, 77, 97, 162], "tag": 58, "configur": 58, "doc": 58, "releas": [58, 59, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138], "To": 58, "major": 58, "extra": 58, "built": [58, 93], "sphinx": [58, 155], "page": 58, "do": 59, "prepar": 59, "number": 59, "candid": 59, "tar": [59, 61], "final": 59, "pypi": 59, "zenodo": 59, "open": 59, "scienc": 59, "framework": 59, "osf": 59, "app": 59, "next": [60, 61, 62, 105], "step": [60, 61, 62, 105, 167], "pip": [62, 85, 165], "quick": [62, 113, 114], "experi": 62, "directori": [62, 66, 74, 82], "troubleshoot": [62, 107, 165], "kmltool": 63, "lagrangian": 64, "particl": 64, "altern": 64, "duplic": 66, "base": 66, "sourc": [66, 75, 101, 154, 159, 166, 167, 170], "name": [66, 67], "replac": 67, "same": 67, "man": 68, "friction": 68, "term": [68, 101, 154, 167, 170], "mapc2p": 69, "march": 70, "front": 70, "argument": 70, "mask": 70, "topofil": 70, "region": [70, 115, 142, 151], "previous_pts_chosen": 70, "below": 70, "given": 70, "buffer": 70, "zone": 70, "along": 70, "shore": 70, "onli": 70, "write": [70, 101, 116, 142], "indic": [70, 96], "determin": 70, "area": 70, "mhw": 70, "matlab": 71, "search": 71, "path": [71, 111], "plotclaw": 71, "afterfram": 71, "help": 71, "found": 71, "maxfram": 71, "nearshor": 72, "copi": 74, "exist": 74, "earthquak": [75, 166], "fault": 75, "slip": 75, "okada": 75, "rectangular": 75, "subfault": 75, "kinemat": 75, "ruptur": 75, "triangular": 75, "openmp": 76, "sytl": 77, "ascii": [77, 97], "fort": [77, 82], "t0002": 77, "q0002": 77, "raw": 77, "binari": [77, 97], "aux": [77, 88], "which": [78, 111], "should": 78, "i": [78, 98], "interfac": 78, "parallel": [78, 94, 99, 100, 106], "comput": [78, 139], "photo": 79, "2016": 79, "univers": 79, "washington": 79, "2015": 79, "utah": 79, "2014": 79, "hpc3": 79, "kaust": 79, "2013": 79, "claw": [79, 146], "dev": 79, "uw": 79, "2012": 79, "2011": 79, "hack": 79, "post": 81, "fly": 81, "faq": 82, "what": [82, 84, 98, 141], "": [82, 93, 104, 141, 170], "make": [82, 99, 153, 165], "how": [82, 84, 98], "someth": 82, "than": 82, "q": 82, "add": 82, "anoth": 82, "curv": 82, "e": 82, "g": 82, "true": 82, "solut": [82, 88, 103], "titl": 82, "outdir": 82, "item": 82, "provid": 82, "size": 82, "background": 82, "color": 82, "colormap": 82, "pcolor": 82, "contourf": 82, "debug": [82, 149], "latex": 84, "interact": [84, 93], "iplotclaw": 84, "access": 84, "printfram": 84, "oper": 85, "contributor": 86, "understand": 88, "class": [88, 91, 158], "simul": 88, "creation": 88, "control": [88, 91, 108], "deriv": [88, 98], "quantiti": [88, 98], "port": 89, "cloud": 90, "sage": 90, "math": 90, "limit": 92, "tvd": 92, "cfl": 92, "independ": 92, "depend": [92, 105], "geometri": 94, "serial": [94, 106, 116], "object": [94, 147], "domain": [94, 108], "patch": 94, "petclaw": [94, 106], "go": 95, "further": 95, "featur": 96, "fileio": 97, "hdf5": 97, "frame": 98, "when": 98, "save": [98, 153], "written": 98, "where": 98, "petsc": 99, "correctli": 99, "pass": 99, "script": 101, "auxiliari": 101, "acoust": [102, 108], "advect": 102, "burger": 102, "euler": 102, "shallow": [102, 141, 154], "sharpclaw": 104, "custom": [104, 140], "bc": 104, "signatur": 104, "numpi": 105, "matplotlib": 105, "obtain": 105, "nose": 105, "state": 106, "order": 107, "solv": 108, "drop": 110, "support": [110, 130], "2": [110, 120, 121, 122, 134, 137], "7": [110, 130, 131], "whichclaw": 111, "wa": 111, "import": 111, "sy": 111, "easi": 111, "pth": 111, "pythonpath": [111, 146], "qinit": [112, 151, 162], "storm": [113, 151, 158, 159], "surg": [113, 159], "criteria": 115, "flag2refin": 115, "richardson": 115, "extrapol": 115, "implement": 115, "regress": 116, "travi": 116, "continu": 116, "integr": 116, "diff": 116, "chardiff": 116, "comparison": 116, "imagediff": 116, "pixel": 116, "simultan": 116, "doctest": 116, "note": [117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138], "global": 125, "8": [132, 133, 134], "checkpoint": 139, "after": 139, "dimension": 140, "pointwis": 140, "f": [140, 170], "layer": 141, "potenti": 141, "miss": 141, "demonstr": 141, "roe": 141, "hll": 141, "relat": 142, "convex": 142, "polygon": 142, "d": 142, "slu": 142, "bounding_box": 142, "mask_outsid": 142, "instanti": 142, "make_kml": 142, "cover": 142, "select": 142, "continent": 142, "shelf": 142, "sea_level": 143, "eta": 144, "init": 144, "spatial": [144, 167], "vari": [144, 167], "behavior": 144, "adjust": [144, 151], "sea": [144, 151], "seismic": 144, "deform": 144, "case": 144, "setaux": [145, 167], "desir": 147, "time": [148, 149, 151, 161, 167], "print": 149, "geo": 151, "fixedgrid": 151, "maximum": 151, "arriv": 151, "share": 153, "local": 155, "src1d": [156, 167], "src": [157, 167], "statist": 161, "download": 162, "displac": 162, "topo": 163, "topotool": 164, "f2py": 165, "ex": 165, "bathymetri": 166, "dart": 166, "buoi": 166, "tide": 166, "done": 167, "befor": 167, "visit": 168, "virtual": 169, "propag": 170, "godunov": 170, "high": 170, "formul": 170, "capac": 170}, "envversion": {"sphinx.domains.c": 2, "sphinx.domains.changeset": 1, "sphinx.domains.citation": 1, "sphinx.domains.cpp": 8, "sphinx.domains.index": 1, "sphinx.domains.javascript": 2, "sphinx.domains.math": 2, "sphinx.domains.python": 3, "sphinx.domains.rst": 2, "sphinx.domains.std": 2, "sphinx": 57}, "alltitles": {"ClawPlotAxes": [[0, "clawplotaxes"]], "Attributes": [[0, "attributes"], [1, "attributes"], [2, "attributes"], [3, "attributes"]], "Attributes for gauge plots": [[0, "attributes-for-gauge-plots"]], "Methods": [[0, "methods"], [1, "methods"], [2, "methods"], [3, "methods"]], "ClawPlotData": [[1, "clawplotdata"]], "ClawPlotFigure": [[2, "clawplotfigure"]], "ClawPlotItem": [[3, "clawplotitem"]], "Special attributes for all 1d plots,  plot_type = \u20181d\u2026\u2019": [[3, "special-attributes-for-all-1d-plots-plot-type-1d"]], "Special attributes for plot_type = \u20181d_plot\u2019": [[3, "special-attributes-for-plot-type-1d-plot"]], "Special attributes for plot_type = \u20181d_fill_between\u2019": [[3, "special-attributes-for-plot-type-1d-fill-between"]], "Special attributes for plot_type = \u20181d_from_2d_data\u2019": [[3, "special-attributes-for-plot-type-1d-from-2d-data"]], "Special attributes for all 2d plots,  plot_type = \u20182d\u2026\u2019": [[3, "special-attributes-for-all-2d-plots-plot-type-2d"]], "Special attributes for plot_type = \u20182d_contour\u2019": [[3, "special-attributes-for-plot-type-2d-contour"]], "Special attributes for plot_type = \u20182d_pcolor\u2019": [[3, "special-attributes-for-plot-type-2d-pcolor"]], "Special attributes for plot_type = \u20182d_imshow\u2019": [[3, "special-attributes-for-plot-type-2d-imshow"]], "Special attributes for plot_type = \u20182d_hillshade\u2019": [[3, "special-attributes-for-plot-type-2d-hillshade"]], "AMR Attributes": [[3, "amr-attributes"]], "Colorbar attributes": [[3, "colorbar-attributes"]], "About this software": [[4, "about-this-software"]], "License": [[4, "license"], [65, "license"], [86, "license"]], "Authors": [[4, "authors"]], "Citing this work": [[4, "citing-this-work"]], "Funding": [[4, "funding"], [86, "funding"]], "Guiding AMR with adjoint flagging": [[5, "guiding-amr-with-adjoint-flagging"]], "Using adjoint flagging in GeoClaw": [[5, "using-adjoint-flagging-in-geoclaw"]], "Adaptive mesh refinement (AMR) algorithms": [[6, "adaptive-mesh-refinement-amr-algorithms"]], "Ghost cells and boundary conditions for AMR": [[6, "ghost-cells-and-boundary-conditions-for-amr"]], "Choosing and initializing finer grids": [[6, "choosing-and-initializing-finer-grids"]], "Flagging cells for refinement": [[6, "flagging-cells-for-refinement"]], "For more details": [[6, "for-more-details"]], "AMRClaw Description and Detailed Contents": [[7, "amrclaw-description-and-detailed-contents"]], "AMRClaw for 1d problems": [[8, "amrclaw-for-1d-problems"]], "Old approach, deprecated:": [[8, "old-approach-deprecated"]], "Doxygen documentation of AMRClaw": [[9, "doxygen-documentation-of-amrclaw"]], "AMRClaw Flowcharts": [[10, "amrclaw-flowcharts"]], "Application documentation": [[11, "application-documentation"]], "Converting README.rst to README.html": [[11, "converting-readme-rst-to-readme-html"]], "Converting code to html with clawcode2html": [[11, "converting-code-to-html-with-clawcode2html"]], "Clawpack Applications repository": [[12, "clawpack-applications-repository"]], "Jupyter Notebooks": [[12, "jupyter-notebooks"]], "Submodules": [[12, "submodules"]], "Examples included with Clawpack": [[12, "examples-included-with-clawpack"]], "Amazon Web Services EC2 Clawpack AMI": [[13, "amazon-web-services-ec2-clawpack-ami"]], "Finding the Clawpack AMI": [[13, "finding-the-clawpack-ami"]], "Launching an instance": [[13, "launching-an-instance"]], "Logging on to your instance": [[13, "logging-on-to-your-instance"]], "Using Clawpack": [[13, "using-clawpack"]], "Viewing plots of results": [[13, "viewing-plots-of-results"]], "Viewing webpages directly from your instance": [[13, "viewing-webpages-directly-from-your-instance"]], "Transferring files to/from your instance": [[13, "transferring-files-to-from-your-instance"]], "Stopping your instance": [[13, "stopping-your-instance"]], "Creating your own AMI": [[13, "creating-your-own-ami"]], "b4run function": [[14, "b4run-function"]], "b4step default routines": [[15, "b4step-default-routines"]], "b4step routine in GeoClaw": [[15, "b4step-routine-in-geoclaw"]], "Boundary conditions": [[16, "boundary-conditions"], [170, "boundary-conditions"]], "Boundary conditions for adaptive refinement": [[16, "boundary-conditions-for-adaptive-refinement"]], "Boundary conditions for GeoClaw": [[16, "boundary-conditions-for-geoclaw"]], "Boundary conditions for clamshell grids on the sphere": [[16, "boundary-conditions-for-clamshell-grids-on-the-sphere"]], "User-defined boundary conditions": [[16, "user-defined-boundary-conditions"]], "Bibliography": [[17, "bibliography"]], "Papers describing the Clawpack software and algorithms": [[17, "papers-describing-the-clawpack-software-and-algorithms"]], "Papers describing applications": [[17, "papers-describing-applications"]], "Other references": [[17, "other-references"]], "Boussinesq solvers in One Space Dimension": [[18, "boussinesq-solvers-in-one-space-dimension"]], "Using the 1d Boussinesq code": [[18, "using-the-1d-boussinesq-code"]], "Makefile": [[18, "makefile"], [19, "makefile"]], "setrun.py": [[18, "setrun-py"], [19, "setrun-py"]], "Boussinesq solvers in Two Space Dimensions": [[19, "boussinesq-solvers-in-two-space-dimensions"]], "Boussinesq-type dispersive equations": [[19, "boussinesq-type-dispersive-equations"]], "The SGN equations": [[19, "the-sgn-equations"]], "The Madsen-Sorensen (MS) equations": [[19, "the-madsen-sorensen-ms-equations"]], "Using the 2d Boussinesq code": [[19, "using-the-2d-boussinesq-code"]], "Prerequisites for the 2d Boussinesq code": [[19, "prerequisites-for-the-2d-boussinesq-code"]], "Wave breaking and switching to SWE": [[19, "wave-breaking-and-switching-to-swe"]], "Examples": [[19, "examples"], [42, "examples"], [47, "examples"], [70, "examples"], [96, "examples"], [142, "examples"]], "Changes to master since v5.10.0": [[20, "changes-to-master-since-v5-10-0"]], "Changes that are not backward compatible": [[20, "changes-that-are-not-backward-compatible"], [118, "changes-that-are-not-backward-compatible"], [127, "changes-that-are-not-backward-compatible"], [128, "changes-that-are-not-backward-compatible"], [129, "changes-that-are-not-backward-compatible"], [130, "changes-that-are-not-backward-compatible"], [131, "changes-that-are-not-backward-compatible"], [132, "changes-that-are-not-backward-compatible"], [133, "changes-that-are-not-backward-compatible"], [134, "changes-that-are-not-backward-compatible"], [135, "changes-that-are-not-backward-compatible"]], "General changes": [[20, "general-changes"], [127, "general-changes"], [128, "general-changes"], [129, "general-changes"], [130, "general-changes"], [131, "general-changes"], [132, "general-changes"], [133, "general-changes"], [134, "general-changes"], [135, "general-changes"], [137, "general-changes"]], "Changes to classic": [[20, "changes-to-classic"], [118, "changes-to-classic"], [119, "changes-to-classic"], [120, "changes-to-classic"], [121, "changes-to-classic"], [122, "changes-to-classic"], [123, "changes-to-classic"], [124, "changes-to-classic"], [125, "changes-to-classic"], [126, "changes-to-classic"], [127, "changes-to-classic"], [128, "changes-to-classic"], [129, "changes-to-classic"], [130, "changes-to-classic"], [131, "changes-to-classic"], [132, "changes-to-classic"], [133, "changes-to-classic"], [134, "changes-to-classic"], [135, "changes-to-classic"], [136, "changes-to-classic"], [137, "changes-to-classic"]], "Changes to clawutil": [[20, "changes-to-clawutil"], [118, "changes-to-clawutil"], [119, "changes-to-clawutil"], [120, "changes-to-clawutil"], [121, "changes-to-clawutil"], [122, "changes-to-clawutil"], [123, "changes-to-clawutil"], [124, "changes-to-clawutil"], [125, "changes-to-clawutil"], [126, "changes-to-clawutil"], [127, "changes-to-clawutil"], [128, "changes-to-clawutil"], [129, "changes-to-clawutil"], [130, "changes-to-clawutil"], [131, "changes-to-clawutil"], [132, "changes-to-clawutil"], [133, "changes-to-clawutil"], [134, "changes-to-clawutil"], [135, "changes-to-clawutil"], [136, "changes-to-clawutil"], [137, "changes-to-clawutil"]], "Changes to visclaw": [[20, "changes-to-visclaw"], [118, "changes-to-visclaw"], [119, "changes-to-visclaw"], [120, "changes-to-visclaw"], [121, "changes-to-visclaw"], [122, "changes-to-visclaw"], [123, "changes-to-visclaw"], [124, "changes-to-visclaw"], [125, "changes-to-visclaw"], [126, "changes-to-visclaw"], [127, "changes-to-visclaw"], [128, "changes-to-visclaw"], [129, "changes-to-visclaw"], [130, "changes-to-visclaw"], [131, "changes-to-visclaw"], [132, "changes-to-visclaw"], [133, "changes-to-visclaw"], [134, "changes-to-visclaw"], [135, "changes-to-visclaw"], [136, "changes-to-visclaw"], [137, "changes-to-visclaw"]], "Changes to riemann": [[20, "changes-to-riemann"], [118, "changes-to-riemann"], [119, "changes-to-riemann"], [120, "changes-to-riemann"], [121, "changes-to-riemann"], [122, "changes-to-riemann"], [123, "changes-to-riemann"], [124, "changes-to-riemann"], [125, "changes-to-riemann"], [126, "changes-to-riemann"], [127, "changes-to-riemann"], [128, "changes-to-riemann"], [129, "changes-to-riemann"], [130, "changes-to-riemann"], [131, "changes-to-riemann"], [132, "changes-to-riemann"], [133, "changes-to-riemann"], [134, "changes-to-riemann"], [135, "changes-to-riemann"], [136, "changes-to-riemann"], [137, "changes-to-riemann"]], "Changes to amrclaw": [[20, "changes-to-amrclaw"], [118, "changes-to-amrclaw"], [119, "changes-to-amrclaw"], [120, "changes-to-amrclaw"], [121, "changes-to-amrclaw"], [122, "changes-to-amrclaw"], [123, "changes-to-amrclaw"], [124, "changes-to-amrclaw"], [125, "changes-to-amrclaw"], [126, "changes-to-amrclaw"], [127, "changes-to-amrclaw"], [128, "changes-to-amrclaw"], [129, "changes-to-amrclaw"], [130, "changes-to-amrclaw"], [131, "changes-to-amrclaw"], [132, "changes-to-amrclaw"], [133, "changes-to-amrclaw"], [134, "changes-to-amrclaw"], [135, "changes-to-amrclaw"], [136, "changes-to-amrclaw"], [137, "changes-to-amrclaw"]], "Changes to geoclaw": [[20, "changes-to-geoclaw"], [118, "changes-to-geoclaw"], [119, "changes-to-geoclaw"], [120, "changes-to-geoclaw"], [121, "changes-to-geoclaw"], [122, "changes-to-geoclaw"], [123, "changes-to-geoclaw"], [124, "changes-to-geoclaw"], [125, "changes-to-geoclaw"], [126, "changes-to-geoclaw"], [127, "changes-to-geoclaw"], [128, "changes-to-geoclaw"], [129, "changes-to-geoclaw"], [130, "changes-to-geoclaw"], [131, "changes-to-geoclaw"], [132, "changes-to-geoclaw"], [133, "changes-to-geoclaw"], [134, "changes-to-geoclaw"], [135, "changes-to-geoclaw"], [136, "changes-to-geoclaw"], [137, "changes-to-geoclaw"]], "Changes to PyClaw": [[20, "changes-to-pyclaw"], [117, "changes-to-pyclaw"], [118, "changes-to-pyclaw"], [119, "changes-to-pyclaw"], [120, "changes-to-pyclaw"], [121, "changes-to-pyclaw"], [122, "changes-to-pyclaw"], [123, "changes-to-pyclaw"], [124, "changes-to-pyclaw"], [125, "changes-to-pyclaw"], [126, "changes-to-pyclaw"], [127, "changes-to-pyclaw"], [128, "changes-to-pyclaw"], [129, "changes-to-pyclaw"], [130, "changes-to-pyclaw"], [131, "changes-to-pyclaw"], [132, "changes-to-pyclaw"], [133, "changes-to-pyclaw"], [134, "changes-to-pyclaw"], [135, "changes-to-pyclaw"], [136, "changes-to-pyclaw"], [137, "changes-to-pyclaw"]], "Other Clawpack Repositories": [[20, "other-clawpack-repositories"], [118, "other-clawpack-repositories"], [126, "other-clawpack-repositories"], [127, "other-clawpack-repositories"], [128, "other-clawpack-repositories"], [129, "other-clawpack-repositories"], [130, "other-clawpack-repositories"], [131, "other-clawpack-repositories"], [132, "other-clawpack-repositories"], [133, "other-clawpack-repositories"], [134, "other-clawpack-repositories"], [135, "other-clawpack-repositories"], [136, "other-clawpack-repositories"], [137, "other-clawpack-repositories"]], "Converting from Clawpack 4.3 to 4.6": [[21, "converting-from-clawpack-4-3-to-4-6"]], "Converting from Clawpack 4.6 to 5.0": [[22, "converting-from-clawpack-4-6-to-5-0"]], "Python conversion tool": [[22, "python-conversion-tool"]], "Clawpack 4.x links": [[23, "clawpack-4-x-links"]], "Changes in Clawpack 5.0": [[24, "changes-in-clawpack-5-0"]], "PyClaw in 5.0": [[24, "pyclaw-in-5-0"]], "Fortran package changes": [[24, "fortran-package-changes"]], "Changes to input parameters in setrun.py from 4.x to 5.0": [[24, "changes-to-input-parameters-in-setrun-py-from-4-x-to-5-0"]], "Changes to general parameters": [[24, "changes-to-general-parameters"]], "Changes to AMR parameters": [[24, "changes-to-amr-parameters"]], "Changes to GeoClaw parameters": [[24, "changes-to-geoclaw-parameters"]], "Changes to plotting routines": [[24, "changes-to-plotting-routines"]], "Clawpack components": [[25, "clawpack-components"]], "Other repositories": [[25, "other-repositories"]], "Clawpack Community": [[26, "clawpack-community"]], "User Workshops, Clinics, and Tutorials": [[26, "user-workshops-clinics-and-tutorials"]], "Available for streaming": [[26, "available-for-streaming"]], "Upcoming": [[26, "upcoming"], [26, "id1"]], "Recent": [[26, "recent"]], "Developer Workshops and Sprint Sessions": [[26, "developer-workshops-and-sprint-sessions"]], "Previous": [[26, "previous"]], "Other Clawpack events": [[26, "other-clawpack-events"]], "Contents": [[27, "id1"], [30, "contents"], [42, "contents"], [70, "contents"], [82, "contents"], [88, "contents"], [98, "contents"], [104, "contents"], [116, "contents"], [142, "contents"]], "Full Table of Contents": [[27, "full-table-of-contents"]], "Overview and Getting Started": [[27, "overview-and-getting-started"]], "Examples and Applications": [[27, "examples-and-applications"]], "Classic, AMRClaw, and GeoClaw": [[27, "classic-amrclaw-and-geoclaw"]], "Using the Fortran codes": [[27, "using-the-fortran-codes"]], "AMRClaw: adaptive mesh refinement": [[27, "amrclaw-adaptive-mesh-refinement"]], "GeoClaw: geophysical flows": [[27, "geoclaw-geophysical-flows"]], "PyClaw": [[27, "pyclaw"], [38, "pyclaw"], [96, "pyclaw"], [116, "pyclaw"], [160, "pyclaw"]], "Riemann": [[27, "riemann"]], "VisClaw: Plotting and Visualization Tools": [[27, "visclaw-plotting-and-visualization-tools"]], "Migrating applications from older versions of Clawpack": [[27, "migrating-applications-from-older-versions-of-clawpack"]], "Developers\u2019 resources": [[27, "developers-resources"]], "References": [[27, "references"], [56, "references"]], "Contributing examples and applications": [[28, "contributing-examples-and-applications"]], "current_data": [[29, "current-data"]], "Attributes of current_data:": [[29, "attributes-of-current-data"]], "Developers\u2019 Guide": [[30, "developers-guide"]], "Guidelines for contributing": [[30, "guidelines-for-contributing"]], "Reporting and fixing bugs": [[30, "reporting-and-fixing-bugs"]], "Developer communication": [[30, "developer-communication"]], "Installation instructions for developers": [[30, "installation-instructions-for-developers"]], "Cloning the most recent code from Github": [[30, "cloning-the-most-recent-code-from-github"]], "Checking out the master branch on each repository": [[30, "checking-out-the-master-branch-on-each-repository"]], "Updating to the latest master branch": [[30, "updating-to-the-latest-master-branch"]], "Never commit to master": [[30, "never-commit-to-master"]], "Adding your fork as a remote": [[30, "adding-your-fork-as-a-remote"]], "Modifying code": [[30, "modifying-code"]], "Issuing a pull request": [[30, "issuing-a-pull-request"]], "Testing a pull request": [[30, "testing-a-pull-request"]], "Top-level pull requests": [[30, "top-level-pull-requests"]], "Git workflow": [[30, "git-workflow"]], "Catching errors with Pyflakes and Pylint": [[30, "catching-errors-with-pyflakes-and-pylint"]], "Checking test coverage": [[30, "checking-test-coverage"]], "Trouble-Shooting Tips": [[30, "trouble-shooting-tips"]], "Docker for Clawpack": [[31, "docker-for-clawpack"]], "Using Version 5.9.0 or above": [[31, "using-version-5-9-0-or-above"]], "Getting started": [[31, "getting-started"]], "Stopping a container": [[31, "stopping-a-container"]], "Restarting a container": [[31, "restarting-a-container"]], "Running Jupyter notebooks": [[31, "running-jupyter-notebooks"]], "Moving files between the docker container and the host machine": [[31, "moving-files-between-the-docker-container-and-the-host-machine"]], "Some other useful docker commands": [[31, "some-other-useful-docker-commands"]], "Creating your own docker image": [[31, "creating-your-own-docker-image"]], "Dockerfiles for binder": [[31, "dockerfiles-for-binder"]], "dtopotools module for moving topography": [[32, "dtopotools-module-for-moving-topography"]], "Documentation auto-generated from the module docstrings": [[32, "module-clawpack.geoclaw.dtopotools"], [35, "module-clawpack.geoclaw.fgmax_tools"], [37, "module-clawpack.geoclaw.fgout_tools"], [51, "module-clawpack.geoclaw.util"], [63, "module-clawpack.geoclaw.kmltools"], [164, "module-clawpack.geoclaw.topotools"]], "Fortran 77 vs. Fortran 90 files": [[33, "fortran-77-vs-fortran-90-files"]], "Fixed grid monitoring (fgmax)": [[34, "fixed-grid-monitoring-fgmax"]], "Input file specification": [[34, "input-file-specification"], [36, "input-file-specification"]], "Different point styles": [[34, "different-point-styles"]], "Other attributes": [[34, "other-attributes"]], "Values to monitor": [[34, "values-to-monitor"]], "Choice of interpolation procedure": [[34, "choice-of-interpolation-procedure"], [36, "choice-of-interpolation-procedure"]], "A simple example": [[34, "a-simple-example"], [36, "a-simple-example"]], "Processing and plotting fgmax output": [[34, "processing-and-plotting-fgmax-output"]], "Format of the output files": [[34, "format-of-the-output-files"]], "fgmax examples": [[34, "fgmax-examples"]], "fgmax_tools module for working with fgmax grids": [[35, "fgmax-tools-module-for-working-with-fgmax-grids"]], "Fixed grid output (fgout)": [[36, "fixed-grid-output-fgout"]], "Format of fgout output": [[36, "format-of-fgout-output"]], "Using setplot.py to produce plots": [[36, "using-setplot-py-to-produce-plots"]], "Reading and plotting fgout arrays directly": [[36, "reading-and-plotting-fgout-arrays-directly"]], "fgout grid registration": [[36, "fgout-grid-registration"]], "fgout examples": [[36, "fgout-examples"]], "fgout_tools module for working with fgout grids": [[37, "fgout-tools-module-for-working-with-fgout-grids"]], "Running an example": [[38, "running-an-example"], [39, "running-an-example"], [40, "running-an-example"]], "Classic": [[38, "classic"], [39, "classic"], [160, "classic"]], "Testing your Fortran installation and running an example": [[39, "testing-your-fortran-installation-and-running-an-example"]], "More examples": [[39, "more-examples"]], "Testing a PyClaw installation and running an example": [[40, "testing-a-pyclaw-installation-and-running-an-example"]], "From the Jupyter notebook": [[40, "from-the-jupyter-notebook"]], "From the IPython interpreter": [[40, "from-the-ipython-interpreter"]], "From the command line": [[40, "from-the-command-line"], [93, "from-the-command-line"]], "Specifying flagregions for adaptive refinement": [[41, "specifying-flagregions-for-adaptive-refinement"]], "Using ruled rectangles as flagregions": [[41, "using-ruled-rectangles-as-flagregions"]], "Force Cells to be Dry Initially": [[42, "force-cells-to-be-dry-initially"]], "Sample topography from a 1/3 arcsecond DEM": [[42, "sample-topography-from-a-1-3-arcsecond-dem"], [70, "sample-topography-from-a-1-3-arcsecond-dem"]], "Creating the force_dry_init array": [[42, "creating-the-force-dry-init-array"]], "Create file to read into GeoClaw": [[42, "create-file-to-read-into-geoclaw"]], "Usage in GeoClaw Fortran code": [[42, "usage-in-geoclaw-fortran-code"]], "Internal GeoClaw modifications": [[42, "internal-geoclaw-modifications"]], "Fortran version": [[43, "fortran-version"]], "Makefiles": [[43, "makefiles"]], "More tips": [[43, "more-tips"]], "Fortran Compilers": [[44, "fortran-compilers"]], "FC environment variable": [[44, "fc-environment-variable"]], "FFLAGS environment variable": [[44, "fflags-environment-variable"]], "LFLAGS environment variable": [[44, "lflags-environment-variable"]], "Pre-Processor and the PPFLAGS environment variable": [[44, "pre-processor-and-the-ppflags-environment-variable"]], "gfortran compiler": [[44, "gfortran-compiler"]], "Intel fortran compiler": [[44, "intel-fortran-compiler"]], "Examples from the book FVMHP": [[45, "examples-from-the-book-fvmhp"]], "Available examples": [[45, "available-examples"]], "YouTube Videos": [[45, "youtube-videos"]], "Clawpack Gallery": [[46, "clawpack-gallery"]], "Gauges": [[47, "gauges"]], "Gauge parameters in setrun": [[47, "gauge-parameters-in-setrun"]], "Plotting tools": [[47, "plotting-tools"]], "Plotting gauge locations": [[47, "plotting-gauge-locations"]], "GeoClaw Description and Detailed Contents": [[48, "geoclaw-description-and-detailed-contents"]], "GeoClaw in One Space Dimension": [[49, "geoclaw-in-one-space-dimension"]], "Coordinate systems": [[49, "coordinate-systems"]], "Uniform and mapped grids": [[49, "uniform-and-mapped-grids"]], "Topograpy data": [[49, "topograpy-data"]], "Moving topograpy (dtopo) data": [[49, "moving-topograpy-dtopo-data"]], "Getting started with GeoClaw": [[50, "getting-started-with-geoclaw"]], "Running a GeoClaw code": [[50, "running-a-geoclaw-code"]], "Topography": [[50, "topography"]], "Plotting GeoClaw results": [[50, "plotting-geoclaw-results"]], "Setting up a new example": [[50, "setting-up-a-new-example"]], "geoclaw.util module of utility functions": [[51, "geoclaw-util-module-of-utility-functions"]], "Cautionary Hints on using GeoClaw": [[52, "cautionary-hints-on-using-geoclaw"]], "Tsunami hazard modeling": [[52, "tsunami-hazard-modeling"]], "GeoClaw plotting tools": [[53, "geoclaw-plotting-tools"]], "Plotting water depth or surface elevation": [[53, "plotting-water-depth-or-surface-elevation"]], "Tips on latitude-longitude coordinate axes": [[53, "tips-on-latitude-longitude-coordinate-axes"]], "Keeping track of repository versions with Git": [[54, "keeping-track-of-repository-versions-with-git"]], "Visualizing GeoClaw results in Google Earth": [[55, "visualizing-geoclaw-results-in-google-earth"]], "Basic requirements": [[55, "basic-requirements"]], "Optional GDAL library": [[55, "optional-gdal-library"]], "An example : The Chile 2010 tsunami event": [[55, "an-example-the-chile-2010-tsunami-event"]], "Plotting attributes needed for Google Earth": [[55, "plotting-attributes-needed-for-google-earth"]], "plotdata attributes": [[55, "plotdata-attributes"]], "plotfigure attributes": [[55, "plotfigure-attributes"]], "Creating the figures": [[55, "creating-the-figures"]], "plotaxes attributes": [[55, "plotaxes-attributes"]], "plotitem attributes": [[55, "plotitem-attributes"]], "Adding a colorbar overlay": [[55, "adding-a-colorbar-overlay"]], "Gauge plots": [[55, "gauge-plots"]], "Additional plotdata attributes": [[55, "additional-plotdata-attributes"]], "Plotting tips": [[55, "plotting-tips"]], "KML and KMZ files": [[55, "kml-and-kmz-files"]], "Tiling images for faster loading": [[55, "tiling-images-for-faster-loading"]], "Removing aliasing artifacts": [[55, "removing-aliasing-artifacts"]], "Creating multiple figures at different resolutions": [[55, "creating-multiple-figures-at-different-resolutions"]], "Mapping topography data to latitude/longitude coordinates": [[55, "mapping-topography-data-to-latitude-longitude-coordinates"]], "Publishing your results": [[55, "id1"]], "Using the GPU version of Clawpack": [[56, "using-the-gpu-version-of-clawpack"]], "Grid registration": [[57, "grid-registration"]], "NetCDF files": [[57, "netcdf-files"]], "Guide for updating this documentation": [[58, "guide-for-updating-this-documentation"]], "Git branches and tags": [[58, "git-branches-and-tags"]], "Configuration and style files": [[58, "configuration-and-style-files"]], "Updating the docs for a new release": [[58, "updating-the-docs-for-a-new-release"]], "To generate docs including previous versions": [[58, "to-generate-docs-including-previous-versions"]], "Updating for a new major version": [[58, "updating-for-a-new-major-version"]], "Updating the gallery": [[58, "updating-the-gallery"]], "Updating the webpages": [[58, "updating-the-webpages"]], "Extra files for webpages not built by Sphinx": [[58, "extra-files-for-webpages-not-built-by-sphinx"]], "Pages from other clawpack repositories": [[58, "pages-from-other-clawpack-repositories"]], "Guide for doing a Clawpack release": [[59, "guide-for-doing-a-clawpack-release"]], "Preparation": [[59, "preparation"]], "Version numbers": [[59, "version-numbers"]], "Release candidates": [[59, "release-candidates"]], "Create a tar file and a Github release": [[59, "create-a-tar-file-and-a-github-release"]], "Final release": [[59, "final-release"]], "Pypi": [[59, "pypi"]], "Zenodo": [[59, "zenodo"]], "Open Science Framework (OSF)": [[59, "open-science-framework-osf"]], "Updating the documentation": [[59, "updating-the-documentation"]], "Updating the apps repository": [[59, "updating-the-apps-repository"]], "Updating the Dockerfile": [[59, "updating-the-dockerfile"]], "Installing Clawpack": [[60, "installing-clawpack"]], "Next steps:": [[60, "next-steps"], [61, "next-steps"], [62, "next-steps"]], "Options for installing Clawpack Fortran codes": [[61, "options-for-installing-clawpack-fortran-codes"]], "tar file": [[61, "tar-file"]], "git clone": [[61, "git-clone"]], "pip install instructions": [[62, "pip-install-instructions"]], "Quick Installation of PyClaw with pip": [[62, "quick-installation-of-pyclaw-with-pip"]], "Quick Installation of all packages with pip": [[62, "quick-installation-of-all-packages-with-pip"]], "Using pip to install a different version": [[62, "using-pip-to-install-a-different-version"]], "Experimenting with code in the examples directories": [[62, "experimenting-with-code-in-the-examples-directories"]], "Troubleshooting pip install": [[62, "troubleshooting-pip-install"]], "kmltools module of utility functions": [[63, "kmltools-module-of-utility-functions"]], "Lagrangian gauges for particle tracking": [[64, "lagrangian-gauges-for-particle-tracking"]], "Specifying Lagrangian Gauges": [[64, "specifying-lagrangian-gauges"]], "Visclaw tools for plotting": [[64, "visclaw-tools-for-plotting"]], "An alternative using fgout grids": [[64, "an-alternative-using-fgout-grids"]], "Clawpack Makefiles": [[66, "clawpack-makefiles"]], "Applications directory Makefiles": [[66, "applications-directory-makefiles"]], "output": [[66, "output"]], "plots": [[66, "plots"]], "Variables": [[66, "variables"]], "Compiler flags": [[66, "compiler-flags"]], "Duplicate Base Source Name": [[66, "duplicate-base-source-name"]], "Library routines in Makefiles": [[67, "library-routines-in-makefiles"]], "Replacing files with the same name as library files": [[67, "replacing-files-with-the-same-name-as-library-files"]], "Using a modified library routine with a different name": [[67, "using-a-modified-library-routine-with-a-different-name"]], "Manning friction term": [[68, "manning-friction-term"]], "The mapc2p function": [[69, "the-mapc2p-function"]], "Marching Front algorithm": [[70, "marching-front-algorithm"]], "Function arguments": [[70, "function-arguments"]], "output array": [[70, "output-array"]], "creating a masked array": [[70, "creating-a-masked-array"]], "topofile mask for initializing dry points": [[70, "topofile-mask-for-initializing-dry-points"]], "fgmax points": [[70, "fgmax-points"]], "flag regions": [[70, "flag-regions"]], "The mask argument": [[70, "the-mask-argument"]], "The previous_pts_chosen argument": [[70, "the-previous-pts-chosen-argument"]], "Finding all points below a given elevation": [[70, "finding-all-points-below-a-given-elevation"]], "Create a buffer zone along shore": [[70, "create-a-buffer-zone-along-shore"]], "Choose points only near shore": [[70, "choose-points-only-near-shore"]], "Write out the masked array indicating fgmax points": [[70, "write-out-the-masked-array-indicating-fgmax-points"]], "Creating an AMR flag region": [[70, "creating-an-amr-flag-region"]], "Determining dry areas below MHW": [[70, "determining-dry-areas-below-mhw"]], "Plotting using Matlab": [[71, "plotting-using-matlab"]], "The Matlab search path": [[71, "the-matlab-search-path"]], "Creating output files": [[71, "creating-output-files"]], "The plotclaw command": [[71, "the-plotclaw-command"]], "The setplot file": [[71, "the-setplot-file"]], "The afterframe file": [[71, "the-afterframe-file"]], "Getting help": [[71, "getting-help"]], "Trouble shooting": [[71, "trouble-shooting"]], "Output files not found": [[71, "output-files-not-found"]], "MaxFrames not set": [[71, "maxframes-not-set"]], "Switching examples": [[71, "switching-examples"]], "Matlab Gallery": [[71, "matlab-gallery"]], "Nearshore interpolation": [[72, "nearshore-interpolation"]], "Using NetCDF output": [[73, "using-netcdf-output"]], "Creating a new application directory": [[74, "creating-a-new-application-directory"]], "Copying an existing example": [[74, "copying-an-existing-example"]], "Earthquake sources: Fault slip and the Okada model": [[75, "earthquake-sources-fault-slip-and-the-okada-model"]], "Fault slip on rectangular subfaults": [[75, "fault-slip-on-rectangular-subfaults"]], "Okada model": [[75, "okada-model"]], "Kinematic rupture": [[75, "kinematic-rupture"]], "Fault slip on triangular subfaults": [[75, "fault-slip-on-triangular-subfaults"]], "Using OpenMP": [[76, "using-openmp"]], "Using OpenMP with AMR": [[76, "using-openmp-with-amr"]], "Fixed grid output in GeoClaw": [[76, "fixed-grid-output-in-geoclaw"]], "Output data sytles and formats": [[77, "output-data-sytles-and-formats"]], "Output style": [[77, "output-style"]], "Output data formats": [[77, "output-data-formats"]], "ASCII output data format": [[77, "ascii-output-data-format"]], "fort.t0002": [[77, "fort-t0002"]], "fort.q0002": [[77, "fort-q0002"]], "Raw binary output data formats": [[77, "raw-binary-output-data-formats"]], "NetCDF output data format": [[77, "netcdf-output-data-format"]], "Output of aux arrays": [[77, "output-of-aux-arrays"]], "Which Clawpack solver should I use?": [[78, "which-clawpack-solver-should-i-use"]], "Installation and user interface": [[78, "installation-and-user-interface"]], "Algorithmic differences": [[78, "algorithmic-differences"]], "Parallel computing": [[78, "parallel-computing"]], "Clawpack Community Photos": [[79, "clawpack-community-photos"]], "2016 Developers\u2019 workshop at University of Washington": [[79, "id1"]], "2015 Developers\u2019 workshop at University of Utah": [[79, "id2"]], "2014 HPC3 workshop at KAUST": [[79, "id3"]], "2013 Claw-Dev workshop at UW": [[79, "id4"]], "2012 HPC3 workshop at KAUST": [[79, "id6"]], "2011 coding sprints at UW": [[79, "coding-sprints-at-uw"]], "2010 GeoClaw hacking UW": [[79, "geoclaw-hacking-uw"]], "Plotting examples": [[80, "plotting-examples"]], "Plotting with Visclaw": [[81, "plotting-with-visclaw"]], "Plotting as post-processing": [[81, "plotting-as-post-processing"]], "Plotting on the fly": [[81, "plotting-on-the-fly"]], "Plotting hints and FAQ": [[82, "plotting-hints-and-faq"]], "What\u2019s the difference between make .plots and make plots ?": [[82, "what-s-the-difference-between-make-plots-and-make-plots"]], "How to plot a something other than a component of q?": [[82, "how-to-plot-a-something-other-than-a-component-of-q"]], "How to add another curve to a plot, e.g. the true solution?": [[82, "how-to-add-another-curve-to-a-plot-e-g-the-true-solution"]], "How to change the title in a plot?": [[82, "how-to-change-the-title-in-a-plot"]], "How to specify outdir, the directory to find fort.* files for plotting?": [[82, "how-to-specify-outdir-the-directory-to-find-fort-files-for-plotting"]], "How to specify a different outdir for some plot item?": [[82, "how-to-specify-a-different-outdir-for-some-plot-item"]], "How to set plot parameters that are not provided as attributes of ClawPlotItem?": [[82, "how-to-set-plot-parameters-that-are-not-provided-as-attributes-of-clawplotitem"]], "How to change the size or background color of a figure?": [[82, "how-to-change-the-size-or-background-color-of-a-figure"]], "Specifying colormaps for pcolor or contourf plots": [[82, "specifying-colormaps-for-pcolor-or-contourf-plots"]], "How to debug setplot.py?": [[82, "how-to-debug-setplot-py"]], "Plotting routines for GeoClaw": [[83, "plotting-routines-for-geoclaw"]], "Plotting options in Python": [[84, "plotting-options-in-python"]], "Producing html plots from the command line": [[84, "producing-html-plots-from-the-command-line"]], "Producing a latex file with plots from the command line": [[84, "producing-a-latex-file-with-plots-from-the-command-line"]], "Setting plot parameters with a setplot function": [[84, "setting-plot-parameters-with-a-setplot-function"]], "Interactive plotting with Iplotclaw": [[84, "interactive-plotting-with-iplotclaw"]], "Access to current_data": [[84, "access-to-current-data"]], "printframes": [[84, "printframes"]], "Specifying what and how to plot": [[84, "specifying-what-and-how-to-plot"]], "Installation Prerequisites": [[85, "installation-prerequisites"]], "Operating system": [[85, "operating-system"]], "Fortran": [[85, "fortran"]], "Python": [[85, "python"]], "pip": [[85, "pip"]], "Git": [[85, "git"]], "About PyClaw": [[86, "about-pyclaw"]], "Contributors": [[86, "contributors"]], "PyClaw Basics": [[87, "pyclaw-basics"]], "Understanding Pyclaw Classes": [[88, "understanding-pyclaw-classes"]], "Flow of a Pyclaw Simulation": [[88, "flow-of-a-pyclaw-simulation"]], "Creation of a Pyclaw Solution": [[88, "creation-of-a-pyclaw-solution"]], "Creation of a Pyclaw Solver": [[88, "creation-of-a-pyclaw-solver"]], "Creating and Running a Simulation with Controller": [[88, "creating-and-running-a-simulation-with-controller"]], "Restarting a simulation": [[88, "restarting-a-simulation"]], "Outputting aux values": [[88, "outputting-aux-values"]], "Outputting derived quantities": [[88, "outputting-derived-quantities"], [98, "outputting-derived-quantities"]], "Porting a problem from Clawpack 4.6.x to PyClaw": [[89, "porting-a-problem-from-clawpack-4-6-x-to-pyclaw"]], "Running PyClaw in the cloud": [[90, "running-pyclaw-in-the-cloud"]], "Sage Math Cloud": [[90, "sage-math-cloud"]], "Pyclaw Controller Class": [[91, "pyclaw-controller-class"]], "pyclaw.controller.Controller": [[91, "pyclaw-controller-controller"]], "Pyclaw Limiters": [[92, "pyclaw-limiters"]], "clawpack.pyclaw.limiters.tvd": [[92, "module-clawpack.pyclaw.limiters.tvd"]], "CFL Independent Limiters": [[92, "cfl-independent-limiters"]], "CFL Dependent Limiters": [[92, "cfl-dependent-limiters"]], "Working with PyClaw\u2019s built-in examples": [[93, "working-with-pyclaw-s-built-in-examples"]], "Running and plotting examples": [[93, "running-and-plotting-examples"]], "Interactively in IPython": [[93, "interactively-in-ipython"]], "Built-in examples": [[93, "built-in-examples"]], "Adding new examples": [[93, "adding-new-examples"]], "PyClaw Geometry": [[94, "pyclaw-geometry"]], "Serial Geometry Objects": [[94, "serial-geometry-objects"]], "pyclaw.geometry.Domain": [[94, "pyclaw-geometry-domain"]], "pyclaw.geometry.Patch": [[94, "pyclaw-geometry-patch"]], "pyclaw.geometry.Grid": [[94, "pyclaw-geometry-grid"]], "pyclaw.geometry.Dimension": [[94, "pyclaw-geometry-dimension"]], "Parallel Geometry Objects": [[94, "parallel-geometry-objects"]], "petclaw.geometry.Domain": [[94, "petclaw-geometry-domain"]], "petclaw.geometry.Patch": [[94, "petclaw-geometry-patch"]], "Going Further": [[95, "going-further"]], "PyClaw installation": [[96, "pyclaw-installation"]], "Features": [[96, "features"]], "PyClaw Documentation": [[96, "pyclaw-documentation"]], "PyClaw Modules reference documentation": [[96, "pyclaw-modules-reference-documentation"]], "Riemann Solvers reference documentation": [[96, "riemann-solvers-reference-documentation"]], "Indices and tables": [[96, "indices-and-tables"]], "Citing PyClaw": [[96, "citing-pyclaw"]], "Pyclaw Input/Output Package": [[97, "pyclaw-input-output-package"]], "pyclaw.fileio.ascii": [[97, "module-clawpack.pyclaw.fileio.ascii"]], "pyclaw.fileio.binary": [[97, "module-clawpack.pyclaw.fileio.binary"]], "pyclaw.fileio.hdf5": [[97, "module-clawpack.pyclaw.fileio.hdf5"]], "pyclaw.fileio.netcdf": [[97, "module-clawpack.pyclaw.fileio.netcdf"]], "PyClaw output": [[98, "pyclaw-output"]], "Output frames": [[98, "output-frames"]], "When output is saved/written": [[98, "when-output-is-saved-written"]], "Where and how output is written": [[98, "where-and-how-output-is-written"]], "What output is written": [[98, "what-output-is-written"]], "Outputting functionals": [[98, "outputting-functionals"]], "Using gauges": [[98, "using-gauges"]], "Logging": [[98, "logging"]], "Running in parallel": [[99, "running-in-parallel"]], "Installing PETSc": [[99, "installing-petsc"]], "Testing your installation": [[99, "testing-your-installation"], [160, "testing-your-installation"]], "Running and plotting an example": [[99, "running-and-plotting-an-example"]], "Tips for making your application run correctly in parallel": [[99, "tips-for-making-your-application-run-correctly-in-parallel"]], "Passing options to PETSc": [[99, "passing-options-to-petsc"]], "Plotting PyClaw results": [[100, "plotting-pyclaw-results"]], "Basics": [[100, "basics"]], "Plotting result from parallel runs": [[100, "plotting-result-from-parallel-runs"]], "Setting up your own problem": [[101, "setting-up-your-own-problem"]], "Writing the initialization script": [[101, "writing-the-initialization-script"]], "Setting initial conditions": [[101, "setting-initial-conditions"]], "Setting auxiliary variables": [[101, "setting-auxiliary-variables"]], "Setting boundary conditions": [[101, "setting-boundary-conditions"]], "Setting solver options": [[101, "setting-solver-options"]], "Using your own Riemann solver": [[101, "using-your-own-riemann-solver"]], "Adding source terms": [[101, "adding-source-terms"]], "Setting up the Makefile": [[101, "setting-up-the-makefile"]], "Riemann Solver Package": [[102, "riemann-solver-package"]], "Acoustics": [[102, "acoustics"]], "Advection": [[102, "advection"]], "Burgers Equation": [[102, "burgers-equation"]], "Euler Equations": [[102, "euler-equations"]], "Shallow Water Equations": [[102, "shallow-water-equations"]], "PyClaw Solutions": [[103, "pyclaw-solutions"]], "pyclaw.solution.Solution": [[103, "pyclaw-solution-solution"]], "Using PyClaw\u2019s solvers: Classic and SharpClaw": [[104, "using-pyclaw-s-solvers-classic-and-sharpclaw"]], "SharpClaw Solvers": [[104, "sharpclaw-solvers"]], "pyclaw.sharpclaw": [[104, "pyclaw-sharpclaw"]], "Pyclaw Classic Clawpack Solvers": [[104, "pyclaw-classic-clawpack-solvers"]], "pyclaw.classic.solver": [[104, "pyclaw-classic-solver"]], "Change to Custom BC Function Signatures": [[104, "change-to-custom-bc-function-signatures"]], "Installing PyClaw": [[105, "installing-pyclaw"]], "Dependencies: Python, gfortran, numpy, and matplotlib": [[105, "dependencies-python-gfortran-numpy-and-matplotlib"]], "Obtaining Python, numpy, and matplotlib": [[105, "obtaining-python-numpy-and-matplotlib"]], "Clawpack": [[105, "clawpack"]], "Testing your installation with nose": [[105, "testing-your-installation-with-nose"]], "Next steps": [[105, "next-steps"]], "PyClaw State": [[106, "pyclaw-state"]], "Serial pyclaw.state.State": [[106, "serial-pyclaw-state-state"]], "Parallel petclaw.state.State": [[106, "parallel-petclaw-state-state"]], "Troubleshooting": [[107, "troubleshooting"], [165, "troubleshooting"]], "Compilation errors": [[107, "compilation-errors"]], "Use Fortran-ordered arrays": [[107, "use-fortran-ordered-arrays"]], "Installation": [[107, "installation"]], "PyClaw tutorial: Solve the acoustics equations": [[108, "pyclaw-tutorial-solve-the-acoustics-equations"]], "The Solver": [[108, "the-solver"]], "The domain": [[108, "the-domain"]], "Initial condition": [[108, "initial-condition"]], "Problem-specific parameters": [[108, "problem-specific-parameters"]], "The controller": [[108, "the-controller"]], "Pyclaw Utility Module": [[109, "pyclaw-utility-module"]], "pyclaw.util": [[109, "module-clawpack.pyclaw.util"]], "Python Hints": [[110, "python-hints"]], "Dropping support for Python 2.7": [[110, "dropping-support-for-python-2-7"]], "References and tutorials": [[110, "references-and-tutorials"]], "Notebooks": [[110, "notebooks"]], "Python path": [[111, "python-path"]], "whichclaw.py": [[111, "whichclaw-py"]], "Which version was imported?": [[111, "which-version-was-imported"]], "sys.path": [[111, "sys-path"]], "easy-install.pth": [[111, "easy-install-pth"]], "PYTHONPATH": [[111, "pythonpath"], [146, "pythonpath"]], "qinit default routines": [[112, "qinit-default-routines"]], "qinit routine in GeoClaw": [[112, "qinit-routine-in-geoclaw"]], "Quick start guide for storm surge modeling": [[113, "quick-start-guide-for-storm-surge-modeling"]], "Quick start guide for tsunami modeling": [[114, "quick-start-guide-for-tsunami-modeling"]], "AMR refinement criteria": [[115, "amr-refinement-criteria"]], "Flagging criteria": [[115, "flagging-criteria"]], "flag2refine": [[115, "flag2refine"]], "Richardson extrapolation": [[115, "richardson-extrapolation"]], "Specifying AMR regions": [[115, "specifying-amr-regions"]], "Implementation": [[115, "implementation"]], "Flagging criteria in GeoClaw": [[115, "flagging-criteria-in-geoclaw"]], "Regression testing": [[116, "regression-testing"]], "Running the tests": [[116, "running-the-tests"], [116, "id2"]], "Fortran codes": [[116, "fortran-codes"]], "Travis continuous integration": [[116, "travis-continuous-integration"]], "Diff tools for checking test output": [[116, "diff-tools-for-checking-test-output"]], "chardiff tool for line-by-line comparison of output files": [[116, "chardiff-tool-for-line-by-line-comparison-of-output-files"]], "imagediff tool for pixel comparison of plots": [[116, "imagediff-tool-for-pixel-comparison-of-plots"]], "Running and writing tests in PyClaw": [[116, "running-and-writing-tests-in-pyclaw"]], "Running serial tests simultaneously": [[116, "running-serial-tests-simultaneously"]], "Running a specific test": [[116, "running-a-specific-test"]], "Doctests": [[116, "doctests"]], "Writing New Tests": [[116, "writing-new-tests"]], "v5.0.0 release notes": [[117, "v5-0-0-release-notes"]], "Changes to classic, riemann, amrclaw, geoclaw, visclaw": [[117, "changes-to-classic-riemann-amrclaw-geoclaw-visclaw"]], "v5.10.0 release notes": [[118, "v5-10-0-release-notes"]], "v5.1.0 release notes": [[119, "v5-1-0-release-notes"]], "v5.2.0 release notes": [[120, "v5-2-0-release-notes"]], "v5.2.1 release notes": [[121, "v5-2-1-release-notes"]], "v5.2.2 release notes": [[122, "v5-2-2-release-notes"]], "v5.3.0 release notes": [[123, "v5-3-0-release-notes"]], "v5.3.1 release notes": [[124, "v5-3-1-release-notes"]], "v5.4.0 release notes": [[125, "v5-4-0-release-notes"]], "Global changes": [[125, "global-changes"]], "v5.4.1 release notes": [[126, "v5-4-1-release-notes"]], "Changes to documentation": [[126, "changes-to-documentation"], [127, "changes-to-documentation"]], "v5.5.0 release notes": [[127, "v5-5-0-release-notes"]], "v5.6.0 release notes": [[128, "v5-6-0-release-notes"]], "v5.6.1 release notes": [[129, "v5-6-1-release-notes"]], "v5.7.0 release notes": [[130, "v5-7-0-release-notes"]], "Python support": [[130, "python-support"]], "v5.7.1 release notes": [[131, "v5-7-1-release-notes"]], "v5.8.0 release notes": [[132, "v5-8-0-release-notes"]], "v5.8.1 release notes": [[133, "v5-8-1-release-notes"]], "v5.8.2 release notes": [[134, "v5-8-2-release-notes"]], "v5.9.0 release notes": [[135, "v5-9-0-release-notes"]], "v5.9.1 release notes": [[136, "v5-9-1-release-notes"]], "v5.9.2 release notes": [[137, "v5-9-2-release-notes"]], "Releases of Clawpack and release notes": [[138, "releases-of-clawpack-and-release-notes"]], "Other notes:": [[138, "other-notes"]], "Releases:": [[138, "id1"]], "Clawpack 4.x": [[138, "clawpack-4-x"]], "Checkpointing and restarting": [[139, "checkpointing-and-restarting"]], "Checkpointing a computation": [[139, "checkpointing-a-computation"]], "Restarting a computation": [[139, "restarting-a-computation"]], "Modifying the Makefile for a restart": [[139, "modifying-the-makefile-for-a-restart"]], "Output files after a restart": [[139, "output-files-after-a-restart"]], "Riemann solvers": [[140, "riemann-solvers"]], "One-dimensional Riemann solver": [[140, "one-dimensional-riemann-solver"]], "Pointwise Riemann solvers": [[140, "pointwise-riemann-solvers"]], "f-wave Riemann solvers": [[140, "f-wave-riemann-solvers"]], "2D Riemann solvers": [[140, "d-riemann-solvers"]], "Using a custom solver": [[140, "using-a-custom-solver"]], "Adding a solver to the Riemann repository": [[140, "adding-a-solver-to-the-riemann-repository"]], "Shallow water Riemann solvers in Clawpack": [[141, "shallow-water-riemann-solvers-in-clawpack"]], "One dimension": [[141, "one-dimension"]], "Two dimensions": [[141, "two-dimensions"]], "Layered shallow water equations": [[141, "layered-shallow-water-equations"]], "Potentially useful contributions (what\u2019s missing)": [[141, "potentially-useful-contributions-whats-missing"]], "Demonstrations": [[141, "demonstrations"]], "Roe": [[141, "roe"]], "HLL": [[141, "hll"]], "Ruled Rectangles": [[142, "ruled-rectangles"]], "Relation to convex polygons": [[142, "relation-to-convex-polygons"]], "Other attributes and methods": [[142, "other-attributes-and-methods"]], "ds": [[142, "ds"]], "slu": [[142, "slu"]], "bounding_box": [[142, "bounding-box"]], "mask_outside": [[142, "mask-outside"]], "read and write, and instantiating from a file": [[142, "read-and-write-and-instantiating-from-a-file"]], "make_kml": [[142, "make-kml"]], "A GeoClaw AMR flag region": [[142, "a-geoclaw-amr-flag-region"]], "A simple rectangle": [[142, "a-simple-rectangle"]], "Defining a Ruled Rectangle covering selected cells": [[142, "defining-a-ruled-rectangle-covering-selected-cells"]], "Example covering the continental shelf": [[142, "example-covering-the-continental-shelf"]], "Setting sea_level": [[143, "setting-sea-level"]], "Set Eta Init \u2013 spatially varying initial surface elevation": [[144, "set-eta-init-spatially-varying-initial-surface-elevation"]], "Default behavior, adjusting sea level by seismic deformation": [[144, "default-behavior-adjusting-sea-level-by-seismic-deformation"]], "Other use cases": [[144, "other-use-cases"]], "setaux default routines": [[145, "setaux-default-routines"]], "setaux routine in GeoClaw": [[145, "setaux-routine-in-geoclaw"]], "Set environment variables": [[146, "set-environment-variables"]], "CLAW": [[146, "claw"]], "FC": [[146, "fc"]], "Using setplot.py to specify the desired plots": [[147, "using-setplot-py-to-specify-the-desired-plots"]], "Plotting Data Objects": [[147, "plotting-data-objects"]], "Overview": [[147, "overview"]], "Specifying classic run-time parameters in setrun.py": [[148, "specifying-classic-run-time-parameters-in-setrun-py"]], "Input": [[148, "input"], [149, "input"]], "Output": [[148, "output"], [149, "output"]], "Run-time parameters": [[148, "run-time-parameters"], [149, "run-time-parameters"]], "Specifying AMRClaw run-time parameters in setrun.py": [[149, "specifying-amrclaw-run-time-parameters-in-setrun-py"]], "Special AMR parameters": [[149, "special-amr-parameters"]], "Debugging flags for additional printing": [[149, "debugging-flags-for-additional-printing"]], "Sample setrun.py module for AMRClaw": [[150, "sample-setrun-py-module-for-amrclaw"]], "Specifying GeoClaw parameters in setrun.py": [[151, "specifying-geoclaw-parameters-in-setrun-py"]], "Additional AMR parameters": [[151, "additional-amr-parameters"]], "General geo parameters": [[151, "general-geo-parameters"]], "Topography data file parameters": [[151, "topography-data-file-parameters"]], "qinit data file parameters": [[151, "qinit-data-file-parameters"]], "Force some cells to be initially dry": [[151, "force-some-cells-to-be-initially-dry"]], "Adjust sea level in some regions": [[151, "adjust-sea-level-in-some-regions"]], "AMR refinement region parameters": [[151, "amr-refinement-region-parameters"]], "Deprecated Fixedgrid output parameters": [[151, "deprecated-fixedgrid-output-parameters"]], "Fixed grid maximum monitoring / arrival times": [[151, "fixed-grid-maximum-monitoring-arrival-times"]], "Fixed grid output": [[151, "fixed-grid-output"]], "Storm Specification Data": [[151, "storm-specification-data"]], "Sample setrun.py module for classic Clawpack": [[152, "sample-setrun-py-module-for-classic-clawpack"]], "Saving and sharing results": [[153, "saving-and-sharing-results"]], "Making webpages of plots": [[153, "making-webpages-of-plots"]], "Sharing your results": [[153, "sharing-your-results"]], "Jupyter notebooks": [[153, "jupyter-notebooks"]], "Source terms for shallow water on the sphere": [[154, "source-terms-for-shallow-water-on-the-sphere"]], "Compiling the Sphinx documentation locally": [[155, "compiling-the-sphinx-documentation-locally"]], "src1d default routines": [[156, "src1d-default-routines"]], "src1d routine in GeoClaw": [[156, "src1d-routine-in-geoclaw"]], "src default routines": [[157, "src-default-routines"]], "src routine in GeoClaw": [[157, "src-routine-in-geoclaw"]], "Storm Specification Class and Tools": [[158, "storm-specification-class-and-tools"]], "Sources for Storm Surge Data": [[159, "sources-for-storm-surge-data"]], "Timing Statistics": [[161, "timing-statistics"]], "Topography data": [[162, "topography-data"]], "Downloading topography files": [[162, "downloading-topography-files"]], "NetCDF format": [[162, "netcdf-format"]], "Topography displacement files": [[162, "topography-displacement-files"]], "qinit data file": [[162, "qinit-data-file"]], "Python tools for working with topo and dtopo": [[163, "python-tools-for-working-with-topo-and-dtopo"]], "topotools module for working with topography data": [[164, "topotools-module-for-working-with-topography-data"]], "Troubleshooting Installation": [[165, "troubleshooting-installation"]], "Troubleshooting Fortran:": [[165, "troubleshooting-fortran"]], "Setting the Fortran compiler to be used by f2py (pip)": [[165, "setting-the-fortran-compiler-to-be-used-by-f2py-pip"]], "Trouble compiling Fortran code at the command line": [[165, "trouble-compiling-fortran-code-at-the-command-line"]], "Trouble running \u201cmake .exe\u201d": [[165, "trouble-running-make-exe"]], "Trouble running \u201cmake .data\u201d": [[165, "trouble-running-make-data"]], "Trouble running \u201cmake .output\u201d": [[165, "trouble-running-make-output"]], "Trouble running \u201cmake .plots\u201d": [[165, "trouble-running-make-plots"]], "Some sources of tsunami data": [[166, "some-sources-of-tsunami-data"]], "Topography / bathymetry": [[166, "topography-bathymetry"]], "Earthquake source models": [[166, "earthquake-source-models"]], "DART buoy data": [[166, "dart-buoy-data"]], "Tide gauges": [[166, "tide-gauges"]], "User files required for the Fortran code": [[167, "user-files-required-for-the-fortran-code"]], "Specifying the initial conditions": [[167, "specifying-the-initial-conditions"]], "Specifying the Riemann solver": [[167, "specifying-the-riemann-solver"]], "Specifying boundary conditions": [[167, "specifying-boundary-conditions"]], "Specifying problem-specific data": [[167, "specifying-problem-specific-data"]], "Specifying spatially-varying data using setaux": [[167, "specifying-spatially-varying-data-using-setaux"]], "Using b4step for work to be done before each time step": [[167, "using-b4step-for-work-to-be-done-before-each-time-step"]], "Using src for source terms": [[167, "using-src-for-source-terms"]], "Using src1d for source terms with AMRClaw": [[167, "using-src1d-for-source-terms-with-amrclaw"]], "Plotting with VisIt": [[168, "plotting-with-visit"]], "Clawpack Virtual Machine": [[169, "clawpack-virtual-machine"]], "Wave-propagation algorithms": [[170, "wave-propagation-algorithms"]], "One space dimension": [[170, "one-space-dimension"]], "Godunov\u2019s method": [[170, "godunov-s-method"]], "High-resolution methods": [[170, "high-resolution-methods"]], "f-wave formulation": [[170, "f-wave-formulation"]], "Capacity functions": [[170, "capacity-functions"]], "Source terms": [[170, "source-terms"]]}, "indexentries": {"clawplotaxes (built-in class)": [[0, "ClawPlotAxes"]], "gethandle()": [[0, "gethandle"], [2, "gethandle"], [3, "gethandle"]], "new_plotitem()": [[0, "new_plotitem"]], "clawplotdata (built-in class)": [[1, "ClawPlotData"]], "clearfigures()": [[1, "clearfigures"]], "clearframes()": [[1, "clearframes"]], "getaxes()": [[1, "getaxes"]], "getfigure()": [[1, "getfigure"]], "getframe()": [[1, "getframe"], [3, "getframe"]], "getitem()": [[1, "getitem"]], "iplotclaw()": [[1, "iplotclaw"]], "new_plotfigure()": [[1, "new_plotfigure"]], "plotframe()": [[1, "plotframe"]], "printframes()": [[1, "printframes"]], "showitems()": [[1, "showitems"]], "clawplotfigure (built-in class)": [[2, "ClawPlotFigure"]], "new_plotaxes()": [[2, "new_plotaxes"]], "clawplotitem (built-in class)": [[3, "ClawPlotItem"]], "csvfault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.CSVFault"]], "dtopography (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.DTopography"]], "dtopography1d (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.DTopography1d"]], "fault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.Fault"]], "fault1d (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.Fault1d"]], "mo() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.Mo"]], "mo() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.Mo"]], "mw() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.Mw"]], "mw() (in module clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.Mw"]], "siftfault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.SiftFault"]], "subfault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.SubFault"]], "subfault1d (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d"]], "subdividedplanefault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.SubdividedPlaneFault"]], "tensorproductfault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.TensorProductFault"]], "ucsbfault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.UCSBFault"]], "calculate_geometry() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.calculate_geometry"]], "calculate_geometry_triangles() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.calculate_geometry_triangles"]], "centers (clawpack.geoclaw.dtopotools.subfault property)": [[32, "clawpack.geoclaw.dtopotools.SubFault.centers"]], "clawpack.geoclaw.dtopotools": [[32, "module-clawpack.geoclaw.dtopotools"]], "containing_rect() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.containing_rect"]], "convert_to_standard_units() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.convert_to_standard_units"]], "coordinate_specification (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.coordinate_specification"]], "coordinate_specification (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.coordinate_specification"]], "corners (clawpack.geoclaw.dtopotools.subfault property)": [[32, "clawpack.geoclaw.dtopotools.SubFault.corners"]], "create_dtopo_xy() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.create_dtopo_xy"]], "create_dtopography() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.create_dtopography"]], "dz_at_t() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.dZ_at_t"]], "dz_at_t() (clawpack.geoclaw.dtopotools.dtopography1d method)": [[32, "clawpack.geoclaw.dtopotools.DTopography1d.dZ_at_t"]], "dz_cellave_at_t() (clawpack.geoclaw.dtopotools.dtopography1d method)": [[32, "clawpack.geoclaw.dtopotools.DTopography1d.dZ_cellave_at_t"]], "dz_max() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.dZ_max"]], "depth (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.depth"]], "dip (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.dip"]], "dynamic_slip() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.dynamic_slip"]], "gauss_pts (clawpack.geoclaw.dtopotools.subfault property)": [[32, "clawpack.geoclaw.dtopotools.SubFault.gauss_pts"]], "latitude (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.latitude"]], "latitude (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.latitude"]], "length (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.length"]], "length (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.length"]], "longitude (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.longitude"]], "longitude (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.longitude"]], "module": [[32, "module-clawpack.geoclaw.dtopotools"], [35, "module-clawpack.geoclaw.fgmax_tools"], [37, "module-clawpack.geoclaw.fgout_tools"], [51, "module-clawpack.geoclaw.util"], [63, "module-clawpack.geoclaw.kmltools"], [92, "module-clawpack.pyclaw.limiters.tvd"], [97, "module-clawpack.pyclaw.fileio.ascii"], [97, "module-clawpack.pyclaw.fileio.binary"], [97, "module-clawpack.pyclaw.fileio.hdf5"], [97, "module-clawpack.pyclaw.fileio.netcdf"], [102, "module-clawpack.riemann.acoustics_1D_py"], [102, "module-clawpack.riemann.advection_1D_py"], [102, "module-clawpack.riemann.burgers_1D_py"], [102, "module-clawpack.riemann.euler_1D_py"], [102, "module-clawpack.riemann.shallow_1D_py"], [109, "module-clawpack.pyclaw.util"], [158, "module-clawpack.geoclaw.surge.storm"], [164, "module-clawpack.geoclaw.topotools"]], "mu (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.mu"]], "okada() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.okada"]], "plot_dz_colors() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.plot_dZ_colors"]], "plot_dz_colors() (in module clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.plot_dZ_colors"]], "plot_dz_contours() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.plot_dZ_contours"]], "plot_dz_contours() (in module clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.plot_dZ_contours"]], "plot_subfaults() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.plot_subfaults"]], "plot_subfaults_depth() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.plot_subfaults_depth"]], "rake (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rake"]], "rake (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.rake"]], "read() (clawpack.geoclaw.dtopotools.csvfault method)": [[32, "clawpack.geoclaw.dtopotools.CSVFault.read"]], "read() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.read"]], "read() (clawpack.geoclaw.dtopotools.dtopography1d method)": [[32, "clawpack.geoclaw.dtopotools.DTopography1d.read"]], "read() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.read"]], "read() (clawpack.geoclaw.dtopotools.ucsbfault method)": [[32, "clawpack.geoclaw.dtopotools.UCSBFault.read"]], "rise_fraction() (in module clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.rise_fraction"]], "rise_shape (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rise_shape"]], "rise_time (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rise_time"]], "rise_time_starting (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rise_time_starting"]], "rupture_time (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rupture_time"]], "rupture_type (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rupture_type"]], "set_corners() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.set_corners"]], "set_dynamic_slip() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.set_dynamic_slip"]], "set_subfaults() (clawpack.geoclaw.dtopotools.siftfault method)": [[32, "clawpack.geoclaw.dtopotools.SiftFault.set_subfaults"]], "slip (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.slip"]], "strike (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.strike"]], "strike (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.strike"]], "strike_direction() (in module clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.strike_direction"]], "subdivide() (clawpack.geoclaw.dtopotools.subdividedplanefault method)": [[32, "clawpack.geoclaw.dtopotools.SubdividedPlaneFault.subdivide"]], "width (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.width"]], "write() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.write"]], "write() (clawpack.geoclaw.dtopotools.dtopography1d method)": [[32, "clawpack.geoclaw.dtopotools.DTopography1d.write"]], "write() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.write"]], "fgmaxgrid (class in clawpack.geoclaw.fgmax_tools)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid"]], "adjust_fgmax_1d() (in module clawpack.geoclaw.fgmax_tools)": [[35, "clawpack.geoclaw.fgmax_tools.adjust_fgmax_1d"]], "bounding_box() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.bounding_box"]], "clawpack.geoclaw.fgmax_tools": [[35, "module-clawpack.geoclaw.fgmax_tools"]], "interp_dz() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.interp_dz"]], "ps4_to_arrays() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.ps4_to_arrays"]], "read_fgmax_grids_data() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.read_fgmax_grids_data"]], "read_output() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.read_output"]], "write_to_fgmax_data() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.write_to_fgmax_data"]], "b (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.B"]], "fgoutframe (class in clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame"]], "fgoutgrid (class in clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid"]], "x (clawpack.geoclaw.fgout_tools.fgoutgrid property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.X"], [37, "clawpack.geoclaw.fgout_tools.FGoutGrid.x"]], "y (clawpack.geoclaw.fgout_tools.fgoutgrid property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.Y"], [37, "clawpack.geoclaw.fgout_tools.FGoutGrid.y"]], "clawpack.geoclaw.fgout_tools": [[37, "module-clawpack.geoclaw.fgout_tools"]], "eta (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.eta"]], "extent_centers (clawpack.geoclaw.fgout_tools.fgoutgrid property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.extent_centers"]], "extent_edges (clawpack.geoclaw.fgout_tools.fgoutgrid property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.extent_edges"]], "get_as_array() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.get_as_array"]], "h (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.h"]], "hss (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.hss"]], "hu (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.hu"]], "hv (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.hv"]], "make_fgout_fcn_xy() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.make_fgout_fcn_xy"]], "make_fgout_fcn_xyt() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.make_fgout_fcn_xyt"]], "print_netcdf_info() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.print_netcdf_info"]], "read_fgout_grids_data() (clawpack.geoclaw.fgout_tools.fgoutgrid method)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.read_fgout_grids_data"]], "read_frame() (clawpack.geoclaw.fgout_tools.fgoutgrid method)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.read_frame"]], "read_netcdf() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.read_netcdf"]], "read_netcdf_arrays() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.read_netcdf_arrays"]], "s (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.s"]], "set_plotdata() (clawpack.geoclaw.fgout_tools.fgoutgrid method)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.set_plotdata"]], "u (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.u"]], "v (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.v"]], "write_netcdf() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.write_netcdf"]], "write_to_fgout_data() (clawpack.geoclaw.fgout_tools.fgoutgrid method)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.write_to_fgout_data"]], "bearing() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.bearing"]], "clawpack.geoclaw.util": [[51, "module-clawpack.geoclaw.util"]], "dist_latlong2meters() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.dist_latlong2meters"]], "dist_meters2latlong() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.dist_meters2latlong"]], "dms2decimal() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.dms2decimal"]], "fetch_noaa_tide_data() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.fetch_noaa_tide_data"]], "gctransect() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.gctransect"]], "haversine() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.haversine"]], "inv_haversine() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.inv_haversine"]], "box2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.box2kml"]], "clawpack.geoclaw.kmltools": [[63, "module-clawpack.geoclaw.kmltools"]], "deg2dms() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.deg2dms"]], "dtopo2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.dtopo2kml"]], "f2s() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.f2s"]], "fgmax2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.fgmax2kml"]], "fgout2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.fgout2kml"]], "gauges2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.gauges2kml"]], "kml_build_colorbar() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.kml_build_colorbar"]], "kml_cb() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.kml_cb"]], "kml_png() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.kml_png"]], "kml_timespan() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.kml_timespan"]], "line2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.line2kml"]], "make_input_data_kmls() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.make_input_data_kmls"]], "pcolorcells_for_kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.pcolorcells_for_kml"]], "png2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.png2kml"]], "poly2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.poly2kml"]], "quad2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.quad2kml"]], "regions2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.regions2kml"]], "topo2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.topo2kml"]], "topo2kmz() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.topo2kmz"]], "transect2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.transect2kml"]], "controller (class in clawpack.pyclaw.controller)": [[91, "clawpack.pyclaw.controller.Controller"]], "f_file_name (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.F_file_name"]], "f_path (clawpack.pyclaw.controller.controller property)": [[91, "clawpack.pyclaw.controller.Controller.F_path"]], "check_validity() (clawpack.pyclaw.controller.controller method)": [[91, "clawpack.pyclaw.controller.Controller.check_validity"]], "compute_f (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.compute_F"]], "compute_p (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.compute_p"]], "file_prefix_p (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.file_prefix_p"]], "frames (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.frames"]], "keep_copy (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.keep_copy"]], "nstepout (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.nstepout"]], "num_output_times (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.num_output_times"]], "out_times (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.out_times"]], "outdir (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.outdir"]], "outdir_p (clawpack.pyclaw.controller.controller property)": [[91, "clawpack.pyclaw.controller.Controller.outdir_p"]], "output_file_prefix (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.output_file_prefix"]], "output_format (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.output_format"]], "output_options (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.output_options"]], "output_style (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.output_style"]], "overwrite (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.overwrite"]], "plot() (clawpack.pyclaw.controller.controller method)": [[91, "clawpack.pyclaw.controller.Controller.plot"]], "plotdata (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.plotdata"]], "run() (clawpack.pyclaw.controller.controller method)": [[91, "clawpack.pyclaw.controller.Controller.run"]], "rundir (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.rundir"]], "runmake (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.runmake"]], "savecode (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.savecode"]], "solver (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.solver"]], "tfinal (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.tfinal"]], "verbosity (clawpack.pyclaw.controller.controller property)": [[91, "clawpack.pyclaw.controller.Controller.verbosity"]], "viewable_attributes (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.viewable_attributes"]], "write_aux_always (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.write_aux_always"]], "write_aux_init (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.write_aux_init"]], "xclawcmd (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.xclawcmd"]], "xclawerr (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.xclawerr"]], "xclawout (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.xclawout"]], "xdir (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.xdir"]], "arora_roe() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.arora_roe"]], "beta_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.beta_limiter"]], "cada_torrilhon_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.cada_torrilhon_limiter"]], "cada_torrilhon_limiter_nonlinear() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.cada_torrilhon_limiter_nonlinear"]], "cfl_superbee() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.cfl_superbee"]], "cfl_superbee_theta() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.cfl_superbee_theta"]], "clawpack.pyclaw.limiters.tvd": [[92, "module-clawpack.pyclaw.limiters.tvd"]], "hyperbee_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.hyperbee_limiter"]], "limit() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.limit"]], "mc_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.mc_limiter"]], "minmod_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.minmod_limiter"]], "superbee_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.superbee_limiter"]], "superpower_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.superpower_limiter"]], "theta_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.theta_limiter"]], "upper_bound_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.upper_bound_limiter"]], "van_leer_klein_sharpening_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.van_leer_klein_sharpening_limiter"]], "dimension (class in clawpack.pyclaw.geometry)": [[94, "clawpack.pyclaw.geometry.Dimension"]], "domain (class in clawpack.petclaw.geometry)": [[94, "clawpack.petclaw.geometry.Domain"]], "domain (class in clawpack.pyclaw.geometry)": [[94, "clawpack.pyclaw.geometry.Domain"]], "grid (class in clawpack.pyclaw.geometry)": [[94, "clawpack.pyclaw.geometry.Grid"]], "patch (class in clawpack.petclaw.geometry)": [[94, "clawpack.petclaw.geometry.Patch"]], "patch (class in clawpack.pyclaw.geometry)": [[94, "clawpack.pyclaw.geometry.Patch"]], "add_dimension() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.add_dimension"]], "add_dimension() (clawpack.pyclaw.geometry.patch method)": [[94, "clawpack.pyclaw.geometry.Patch.add_dimension"]], "add_gauges() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.add_gauges"]], "c_center() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.c_center"]], "c_centers (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.c_centers"]], "c_centers_with_ghost() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.c_centers_with_ghost"]], "c_nodes (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.c_nodes"]], "c_nodes_with_ghost() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.c_nodes_with_ghost"]], "centers (clawpack.pyclaw.geometry.dimension property)": [[94, "clawpack.pyclaw.geometry.Dimension.centers"]], "centers_with_ghost() (clawpack.pyclaw.geometry.dimension method)": [[94, "clawpack.pyclaw.geometry.Dimension.centers_with_ghost"]], "delta (clawpack.pyclaw.geometry.dimension property)": [[94, "clawpack.pyclaw.geometry.Dimension.delta"]], "delta (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.delta"]], "dimensional_split (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.dimensional_split"]], "dimensions (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.dimensions"]], "dimensions (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.dimensions"]], "fwave (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.fwave"]], "gauge_dir_name (clawpack.pyclaw.geometry.grid attribute)": [[94, "clawpack.pyclaw.geometry.Grid.gauge_dir_name"]], "gauge_file_names (clawpack.pyclaw.geometry.grid attribute)": [[94, "clawpack.pyclaw.geometry.Grid.gauge_file_names"]], "gauge_files (clawpack.pyclaw.geometry.grid attribute)": [[94, "clawpack.pyclaw.geometry.Grid.gauge_files"]], "gauges (clawpack.pyclaw.geometry.grid attribute)": [[94, "clawpack.pyclaw.geometry.Grid.gauges"]], "get_dim_attribute() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.get_dim_attribute"]], "get_dim_attribute() (clawpack.pyclaw.geometry.patch method)": [[94, "clawpack.pyclaw.geometry.Patch.get_dim_attribute"]], "grid (clawpack.pyclaw.geometry.domain property)": [[94, "clawpack.pyclaw.geometry.Domain.grid"]], "kernel_language (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.kernel_language"]], "level (clawpack.pyclaw.geometry.patch attribute)": [[94, "clawpack.pyclaw.geometry.Patch.level"]], "lower_global (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.lower_global"]], "mthlim (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.mthlim"]], "name (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.name"]], "nodes (clawpack.pyclaw.geometry.dimension property)": [[94, "clawpack.pyclaw.geometry.Dimension.nodes"]], "nodes_with_ghost() (clawpack.pyclaw.geometry.dimension method)": [[94, "clawpack.pyclaw.geometry.Dimension.nodes_with_ghost"]], "num_cells_global (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.num_cells_global"]], "num_dim (clawpack.pyclaw.geometry.domain property)": [[94, "clawpack.pyclaw.geometry.Domain.num_dim"]], "num_dim (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.num_dim"]], "num_dim (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.num_dim"]], "order (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.order"]], "p_center() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.p_center"]], "p_centers (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.p_centers"]], "p_nodes (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.p_nodes"]], "patch (clawpack.pyclaw.geometry.domain property)": [[94, "clawpack.pyclaw.geometry.Domain.patch"]], "patch_index (clawpack.pyclaw.geometry.patch attribute)": [[94, "clawpack.pyclaw.geometry.Patch.patch_index"]], "plot() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.plot"]], "setup_gauge_files() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.setup_gauge_files"]], "source_split (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.source_split"]], "step_source (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.step_source"]], "transverse_waves (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.transverse_waves"]], "upper_global (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.upper_global"]], "verbosity (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.verbosity"]], "clawpack.pyclaw.fileio.ascii": [[97, "module-clawpack.pyclaw.fileio.ascii"]], "clawpack.pyclaw.fileio.binary": [[97, "module-clawpack.pyclaw.fileio.binary"]], "clawpack.pyclaw.fileio.hdf5": [[97, "module-clawpack.pyclaw.fileio.hdf5"]], "clawpack.pyclaw.fileio.netcdf": [[97, "module-clawpack.pyclaw.fileio.netcdf"]], "read() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.read"]], "read() (in module clawpack.pyclaw.fileio.binary)": [[97, "clawpack.pyclaw.fileio.binary.read"]], "read() (in module clawpack.pyclaw.fileio.hdf5)": [[97, "clawpack.pyclaw.fileio.hdf5.read"]], "read() (in module clawpack.pyclaw.fileio.netcdf)": [[97, "clawpack.pyclaw.fileio.netcdf.read"]], "read_array() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.read_array"]], "read_patch_header() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.read_patch_header"]], "read_t() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.read_t"]], "write() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.write"]], "write() (in module clawpack.pyclaw.fileio.hdf5)": [[97, "clawpack.pyclaw.fileio.hdf5.write"]], "write() (in module clawpack.pyclaw.fileio.netcdf)": [[97, "clawpack.pyclaw.fileio.netcdf.write"]], "write_array() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.write_array"]], "acoustics_1d() (in module clawpack.riemann.acoustics_1d_py)": [[102, "clawpack.riemann.acoustics_1D_py.acoustics_1D"]], "advection_1d() (in module clawpack.riemann.advection_1d_py)": [[102, "clawpack.riemann.advection_1D_py.advection_1D"]], "burgers_1d() (in module clawpack.riemann.burgers_1d_py)": [[102, "clawpack.riemann.burgers_1D_py.burgers_1D"]], "clawpack.riemann.acoustics_1d_py": [[102, "module-clawpack.riemann.acoustics_1D_py"]], "clawpack.riemann.advection_1d_py": [[102, "module-clawpack.riemann.advection_1D_py"]], "clawpack.riemann.burgers_1d_py": [[102, "module-clawpack.riemann.burgers_1D_py"]], "clawpack.riemann.euler_1d_py": [[102, "module-clawpack.riemann.euler_1D_py"]], "clawpack.riemann.shallow_1d_py": [[102, "module-clawpack.riemann.shallow_1D_py"]], "euler_exact_1d() (in module clawpack.riemann.euler_1d_py)": [[102, "clawpack.riemann.euler_1D_py.euler_exact_1D"]], "euler_hll_1d() (in module clawpack.riemann.euler_1d_py)": [[102, "clawpack.riemann.euler_1D_py.euler_hll_1D"]], "euler_hllc_1d() (in module clawpack.riemann.euler_1d_py)": [[102, "clawpack.riemann.euler_1D_py.euler_hllc_1D"]], "euler_roe_1d() (in module clawpack.riemann.euler_1d_py)": [[102, "clawpack.riemann.euler_1D_py.euler_roe_1D"]], "shallow_exact_1d() (in module clawpack.riemann.shallow_1d_py)": [[102, "clawpack.riemann.shallow_1D_py.shallow_exact_1D"]], "shallow_fwave_1d() (in module clawpack.riemann.shallow_1d_py)": [[102, "clawpack.riemann.shallow_1D_py.shallow_fwave_1d"]], "shallow_hll_1d() (in module clawpack.riemann.shallow_1d_py)": [[102, "clawpack.riemann.shallow_1D_py.shallow_hll_1D"]], "shallow_roe_1d() (in module clawpack.riemann.shallow_1d_py)": [[102, "clawpack.riemann.shallow_1D_py.shallow_roe_1D"]], "solution (class in clawpack.pyclaw.solution)": [[103, "clawpack.pyclaw.solution.Solution"]], "is_valid() (clawpack.pyclaw.solution.solution method)": [[103, "clawpack.pyclaw.solution.Solution.is_valid"]], "patch (clawpack.pyclaw.solution.solution property)": [[103, "clawpack.pyclaw.solution.Solution.patch"]], "plot() (clawpack.pyclaw.solution.solution method)": [[103, "clawpack.pyclaw.solution.Solution.plot"]], "read() (clawpack.pyclaw.solution.solution method)": [[103, "clawpack.pyclaw.solution.Solution.read"]], "set_all_states() (clawpack.pyclaw.solution.solution method)": [[103, "clawpack.pyclaw.solution.Solution.set_all_states"]], "start_frame (clawpack.pyclaw.solution.solution property)": [[103, "clawpack.pyclaw.solution.Solution.start_frame"]], "state (clawpack.pyclaw.solution.solution property)": [[103, "clawpack.pyclaw.solution.Solution.state"]], "write() (clawpack.pyclaw.solution.solution method)": [[103, "clawpack.pyclaw.solution.Solution.write"]], "clawsolver (class in clawpack.pyclaw.classic.solver)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver"]], "sharpclawsolver (class in clawpack.pyclaw.sharpclaw.solver)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver"]], "accept_reject_step() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.accept_reject_step"]], "aux_time_dep (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.aux_time_dep"]], "call_before_step_each_stage (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.call_before_step_each_stage"]], "cfl_desired (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.cfl_desired"]], "cfl_max (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.cfl_max"]], "char_decomp (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.char_decomp"]], "check_3rd_ord_cond() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.check_3rd_ord_cond"]], "dq() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.dq"]], "dq_src (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.dq_src"]], "dqdt() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.dqdt"]], "fwave (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.fwave"]], "fwave (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.fwave"]], "get_dt_new() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.get_dt_new"]], "kernel_language (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.kernel_language"]], "kernel_language (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.kernel_language"]], "lim_type (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.lim_type"]], "mthlim (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.mthlim"]], "num_ghost (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.num_ghost"]], "order (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.order"]], "setup() (clawpack.pyclaw.classic.solver.clawsolver method)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.setup"]], "setup() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.setup"]], "source_split (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.source_split"]], "step() (clawpack.pyclaw.classic.solver.clawsolver method)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.step"]], "step() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.step"]], "step_hyperbolic() (clawpack.pyclaw.classic.solver.clawsolver method)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.step_hyperbolic"]], "step_source (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.step_source"]], "tfluct (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.tfluct"]], "tfluct_solver (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.tfluct_solver"]], "time_integrator (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.time_integrator"]], "update_saved_values() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.update_saved_values"]], "verbosity (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.verbosity"]], "weno_order (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.weno_order"]], "f (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.F"]], "f (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.F"]], "state (class in clawpack.petclaw.state)": [[106, "clawpack.petclaw.state.State"]], "state (class in clawpack.pyclaw.state)": [[106, "clawpack.pyclaw.state.State"]], "aux (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.aux"]], "fset (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.fset"]], "gauge_data (clawpack.petclaw.state.state attribute)": [[106, "clawpack.petclaw.state.State.gauge_data"]], "gauge_data (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.gauge_data"]], "get_aux_global() (clawpack.petclaw.state.state method)": [[106, "clawpack.petclaw.state.State.get_aux_global"]], "get_aux_global() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.get_aux_global"]], "get_auxbc_from_aux() (clawpack.petclaw.state.state method)": [[106, "clawpack.petclaw.state.State.get_auxbc_from_aux"]], "get_auxbc_from_aux() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.get_auxbc_from_aux"]], "get_q_global() (clawpack.petclaw.state.state method)": [[106, "clawpack.petclaw.state.State.get_q_global"]], "get_q_global() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.get_q_global"]], "get_qbc_from_q() (clawpack.petclaw.state.state method)": [[106, "clawpack.petclaw.state.State.get_qbc_from_q"]], "get_qbc_from_q() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.get_qbc_from_q"]], "is_valid() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.is_valid"]], "keep_gauges (clawpack.petclaw.state.state attribute)": [[106, "clawpack.petclaw.state.State.keep_gauges"]], "keep_gauges (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.keep_gauges"]], "mf (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.mF"]], "mf (clawpack.pyclaw.state.state property)": [[106, "clawpack.pyclaw.state.State.mF"]], "mp (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.mp"]], "mp (clawpack.pyclaw.state.state property)": [[106, "clawpack.pyclaw.state.State.mp"]], "num_aux (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.num_aux"]], "num_aux (clawpack.pyclaw.state.state property)": [[106, "clawpack.pyclaw.state.State.num_aux"]], "num_eqn (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.num_eqn"]], "num_eqn (clawpack.pyclaw.state.state property)": [[106, "clawpack.pyclaw.state.State.num_eqn"]], "p (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.p"]], "p (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.p"]], "problem_data (clawpack.petclaw.state.state attribute)": [[106, "clawpack.petclaw.state.State.problem_data"]], "problem_data (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.problem_data"]], "q (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.q"]], "set_aux_from_auxbc() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.set_aux_from_auxbc"]], "set_cparam() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.set_cparam"]], "set_num_ghost() (clawpack.petclaw.state.state method)": [[106, "clawpack.petclaw.state.State.set_num_ghost"]], "set_num_ghost() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.set_num_ghost"]], "set_q_from_qbc() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.set_q_from_qbc"]], "t (clawpack.petclaw.state.state attribute)": [[106, "clawpack.petclaw.state.State.t"]], "t (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.t"]], "framecounter (class in clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.FrameCounter"]], "verifyerror": [[109, "clawpack.pyclaw.util.VerifyError"]], "add_parent_doc() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.add_parent_doc"]], "check_diff() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.check_diff"]], "clawpack.pyclaw.util": [[109, "module-clawpack.pyclaw.util"]], "compile_library() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.compile_library"]], "construct_function_handle() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.construct_function_handle"]], "convert_fort_double_to_float() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.convert_fort_double_to_float"]], "gen_variants() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.gen_variants"]], "get_counter() (clawpack.pyclaw.util.framecounter method)": [[109, "clawpack.pyclaw.util.FrameCounter.get_counter"]], "increment() (clawpack.pyclaw.util.framecounter method)": [[109, "clawpack.pyclaw.util.FrameCounter.increment"]], "read_data_line() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.read_data_line"]], "reset_counter() (clawpack.pyclaw.util.framecounter method)": [[109, "clawpack.pyclaw.util.FrameCounter.reset_counter"]], "run_app_from_main() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.run_app_from_main"]], "run_serialized() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.run_serialized"]], "set_counter() (clawpack.pyclaw.util.framecounter method)": [[109, "clawpack.pyclaw.util.FrameCounter.set_counter"]], "test_app() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.test_app"]], "nodataerror": [[158, "clawpack.geoclaw.surge.storm.NoDataError"]], "storm (class in clawpack.geoclaw.surge.storm)": [[158, "clawpack.geoclaw.surge.storm.Storm"]], "available_formats() (in module clawpack.geoclaw.surge.storm)": [[158, "clawpack.geoclaw.surge.storm.available_formats"]], "available_models() (in module clawpack.geoclaw.surge.storm)": [[158, "clawpack.geoclaw.surge.storm.available_models"]], "category() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.category"]], "clawpack.geoclaw.surge.storm": [[158, "module-clawpack.geoclaw.surge.storm"]], "fill_rad_w_other_source() (in module clawpack.geoclaw.surge.storm)": [[158, "clawpack.geoclaw.surge.storm.fill_rad_w_other_source"]], "make_multi_structure() (in module clawpack.geoclaw.surge.storm)": [[158, "clawpack.geoclaw.surge.storm.make_multi_structure"]], "read() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read"]], "read_atcf() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_atcf"]], "read_geoclaw() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_geoclaw"]], "read_hurdat() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_hurdat"]], "read_ibtracs() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_ibtracs"]], "read_imd() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_imd"]], "read_jma() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_jma"]], "read_tcvitals() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_tcvitals"]], "write() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write"]], "write_atcf() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_atcf"]], "write_geoclaw() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_geoclaw"]], "write_hurdat() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_hurdat"]], "write_imd() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_imd"]], "write_jma() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_jma"]], "write_tcvitals() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_tcvitals"]], "topography (class in clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.Topography"]], "x (clawpack.geoclaw.topotools.topography property)": [[164, "clawpack.geoclaw.topotools.Topography.X"], [164, "clawpack.geoclaw.topotools.Topography.x"]], "y (clawpack.geoclaw.topotools.topography property)": [[164, "clawpack.geoclaw.topotools.Topography.Y"], [164, "clawpack.geoclaw.topotools.Topography.y"]], "z (clawpack.geoclaw.topotools.topography property)": [[164, "clawpack.geoclaw.topotools.Topography.Z"], [164, "clawpack.geoclaw.topotools.Topography.z"]], "clawpack.geoclaw.topotools": [[164, "module-clawpack.geoclaw.topotools"]], "create_topo_func() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.create_topo_func"]], "crop() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.crop"]], "delta (clawpack.geoclaw.topotools.topography property)": [[164, "clawpack.geoclaw.topotools.Topography.delta"]], "determine_topo_type() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.determine_topo_type"]], "extent (clawpack.geoclaw.topotools.topography property)": [[164, "clawpack.geoclaw.topotools.Topography.extent"]], "fetch_topo_url() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.fetch_topo_url"]], "generate_2d_coordinates() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.generate_2d_coordinates"]], "generate_2d_topo() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.generate_2d_topo"]], "get_topo() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.get_topo"]], "in_poly() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.in_poly"]], "interp_unstructured() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.interp_unstructured"]], "make_shoreline_xy() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.make_shoreline_xy"]], "plot() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.plot"]], "read() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.read"]], "read_header() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.read_header"]], "read_netcdf() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.read_netcdf"]], "replace_no_data_values() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.replace_no_data_values"]], "replace_values() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.replace_values"]], "set_xyz() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.set_xyZ"]], "smooth_data() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.smooth_data"]], "swapheader() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.swapheader"]], "topo1writer() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.topo1writer"]], "topo2writer() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.topo2writer"]], "topo3writer() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.topo3writer"]], "write() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.write"]]}})
\ No newline at end of file
diff --git a/dev/set_eta_init.html b/dev/set_eta_init.html
index f7129f30d..ceff6138d 100644
--- a/dev/set_eta_init.html
+++ b/dev/set_eta_init.html
@@ -6,7 +6,7 @@
     
     
 
-    Set Eta Init – spatially varying initial surface elevation — Clawpack 5.10.x documentation
+    Set Eta Init – spatially varying initial surface elevation — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
        Navigation
        
         
      • 
           previous |
        • 
-        
      • Clawpack 5.10.x documentation »
        • 
+        
      • Clawpack dev documentation »
        • 
           
      • GeoClaw Description and Detailed Contents »
        • 
         
      • Set Eta Init – spatially varying initial surface elevation
        •  
       
      
@@ -187,7 +187,7 @@ 
      Other use cases
     
 
-
      Version 5.10.x
      
+
      Version dev
      
 
      
   
      
     
      Table of Contents
      
diff --git a/dev/setaux_defaults.html b/dev/setaux_defaults.html
index ba5233865..543740f6b 100644
--- a/dev/setaux_defaults.html
+++ b/dev/setaux_defaults.html
@@ -6,7 +6,7 @@
     
     
 
-    setaux default routines — Clawpack 5.10.x documentation
+    setaux default routines — Clawpack dev documentation
     
     
     
@@ -66,7 +66,7 @@ 
      Navigation
      
         
    • 
           modules |
      • 
-        
    • Clawpack 5.10.x documentation »
      • 
+        
    • Clawpack dev documentation »
      • 
         
    • setaux default routines
      •  
       
    
     
      
@@ -112,7 +112,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/setenv.html b/dev/setenv.html
index 54f91ec98..db4273e19 100644
--- a/dev/setenv.html
+++ b/dev/setenv.html
@@ -6,7 +6,7 @@
     
     
 
-    Set environment variables — Clawpack 5.10.x documentation
+    Set environment variables — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • Set environment variables
    •  
       
     
      
@@ -144,7 +144,7 @@ 
    PYTHONPATH
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/setplot.html b/dev/setplot.html
index 790bfbe4d..dd10c8013 100644
--- a/dev/setplot.html
+++ b/dev/setplot.html
@@ -6,7 +6,7 @@
     
     
 
-    Using setplot.py to specify the desired plots — Clawpack 5.10.x documentation
+    Using setplot.py to specify the desired plots — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • Plotting with Visclaw »
    • 
         
  • Using setplot.py to specify the desired plots
    •  
       
@@ -217,7 +217,7 @@ 
    Plotting Data Objects
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/setrun.html b/dev/setrun.html
index e2cb0e375..6852ddb64 100644
--- a/dev/setrun.html
+++ b/dev/setrun.html
@@ -6,7 +6,7 @@
     
     
 
-    Specifying classic run-time parameters in setrun.py — Clawpack 5.10.x documentation
+    Specifying classic run-time parameters in setrun.py — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • Specifying classic run-time parameters in setrun.py
    •  
       
     
      
@@ -512,7 +512,7 @@ 
    Run-time parameters
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/setrun_amrclaw.html b/dev/setrun_amrclaw.html
index ee1600d7c..d7fa00a0b 100644
--- a/dev/setrun_amrclaw.html
+++ b/dev/setrun_amrclaw.html
@@ -6,7 +6,7 @@
     
     
 
-    Specifying AMRClaw run-time parameters in setrun.py — Clawpack 5.10.x documentation
+    Specifying AMRClaw run-time parameters in setrun.py — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • AMRClaw Description and Detailed Contents »
    • 
         
  • Specifying AMRClaw run-time parameters in setrun.py
    •  
       
@@ -375,7 +375,7 @@ 
    Debugging flags for additional printing
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/setrun_amrclaw_sample.html b/dev/setrun_amrclaw_sample.html
index c7a462625..a59e79d93 100644
--- a/dev/setrun_amrclaw_sample.html
+++ b/dev/setrun_amrclaw_sample.html
@@ -6,7 +6,7 @@
     
     
 
-    Sample setrun.py module for AMRClaw — Clawpack 5.10.x documentation
+    Sample setrun.py module for AMRClaw — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • AMRClaw Description and Detailed Contents »
    • 
         
  • Sample setrun.py module for AMRClaw
    •  
       
@@ -452,7 +452,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    Related Topics
    
 
     
      
@@ -341,7 +341,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    Related Topics
    
 
      
@@ -129,7 +129,7 @@ 
    Jupyter notebooks
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/sphere_source.html b/dev/sphere_source.html
index aa550f7c9..b29d5c7ca 100644
--- a/dev/sphere_source.html
+++ b/dev/sphere_source.html
@@ -6,7 +6,7 @@
     
     
 
-    Source terms for shallow water on the sphere — Clawpack 5.10.x documentation
+    Source terms for shallow water on the sphere — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • GeoClaw Description and Detailed Contents »
    • 
         
  • Source terms for shallow water on the sphere
    •  
       
@@ -124,7 +124,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    Related Topics
    
 
      
@@ -104,7 +104,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    Related Topics
    
 
      
@@ -112,7 +112,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/src_defaults.html b/dev/src_defaults.html
index 96ce9a0b7..c77484104 100644
--- a/dev/src_defaults.html
+++ b/dev/src_defaults.html
@@ -6,7 +6,7 @@
     
     
 
-    src default routines — Clawpack 5.10.x documentation
+    src default routines — Clawpack dev documentation
     
     
     
@@ -66,7 +66,7 @@ 
    Navigation
    
         
  • 
           modules |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • src default routines
    •  
       
     
      
@@ -114,7 +114,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/storm_module.html b/dev/storm_module.html
index 4c88b36d4..63d523200 100644
--- a/dev/storm_module.html
+++ b/dev/storm_module.html
@@ -6,7 +6,7 @@
     
     
 
-    Storm Specification Class and Tools — Clawpack 5.10.x documentation
+    Storm Specification Class and Tools — Clawpack dev documentation
     
     
     
@@ -66,7 +66,7 @@ 
    Navigation
    
         
  • 
           modules |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • Storm Specification Class and Tools
    •  
       
     
      
@@ -634,7 +634,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/surgedata.html b/dev/surgedata.html
index 01661ae33..694e2e38e 100644
--- a/dev/surgedata.html
+++ b/dev/surgedata.html
@@ -6,7 +6,7 @@
     
     
 
-    Sources for Storm Surge Data — Clawpack 5.10.x documentation
+    Sources for Storm Surge Data — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • GeoClaw Description and Detailed Contents »
    • 
         
  • Sources for Storm Surge Data
    •  
       
@@ -130,7 +130,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    Related Topics
    
 
      
@@ -135,7 +135,7 @@ 
    Classic
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/timing.html b/dev/timing.html
index c31447417..86a558dc1 100644
--- a/dev/timing.html
+++ b/dev/timing.html
@@ -6,7 +6,7 @@
     
     
 
-    Timing Statistics — Clawpack 5.10.x documentation
+    Timing Statistics — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • Timing Statistics
    •  
       
     
      
@@ -142,7 +142,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    Related Topics
    
 
@@ -107,7 +107,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    Related Topics
    
 
      
@@ -215,7 +215,7 @@ 
    Troubleshooting Fortran:
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/tsunamidata.html b/dev/tsunamidata.html
index 435ac0ce5..7eed87443 100644
--- a/dev/tsunamidata.html
+++ b/dev/tsunamidata.html
@@ -6,7 +6,7 @@
     
     
 
-    Some sources of tsunami data — Clawpack 5.10.x documentation
+    Some sources of tsunami data — Clawpack dev documentation
     
     
     
@@ -75,7 +75,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • GeoClaw Description and Detailed Contents »
    • 
         
  • Some sources of tsunami data
    •  
       
@@ -171,7 +171,7 @@ 
    Tide gauges
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/user_routines.html b/dev/user_routines.html
index 68e03e48d..ef6176c90 100644
--- a/dev/user_routines.html
+++ b/dev/user_routines.html
@@ -6,7 +6,7 @@
     
     
 
-    User files required for the Fortran code — Clawpack 5.10.x documentation
+    User files required for the Fortran code — Clawpack dev documentation
     
     
     
@@ -75,7 +75,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
         
  • User files required for the Fortran code
    •  
       
     
      
@@ -306,7 +306,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/dev/visit_plotting.html b/dev/visit_plotting.html
index 6b5cf983a..d1a6a9c59 100644
--- a/dev/visit_plotting.html
+++ b/dev/visit_plotting.html
@@ -6,7 +6,7 @@
     
     
 
-    Plotting with VisIt — Clawpack 5.10.x documentation
+    Plotting with VisIt — Clawpack dev documentation
     
     
     
@@ -74,7 +74,7 @@ 
    Navigation
    
         
  • 
           previous |
    • 
-        
  • Clawpack 5.10.x documentation »
    • 
+        
  • Clawpack dev documentation »
    • 
           
  • Plotting with Visclaw »
    • 
         
  • Plotting with VisIt
    •  
       
@@ -124,7 +124,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    Related Topics
    
 
      
@@ -104,7 +104,7 @@ 
    Navigation
    
 
    
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    Related Topics
    
 
      
@@ -214,7 +214,7 @@ 
    Boundary conditions
     
 
-
    Version 5.10.x
    
+
    Version dev
    
 
    
   
    
     
    Table of Contents
    
diff --git a/howto_release.html b/howto_release.html
index 7ad3f7e8e..5a353e051 100644
--- a/howto_release.html
+++ b/howto_release.html
@@ -185,7 +185,7 @@ 
    Final releaseChanges to master since v5.9.2 which generate diffs between the latest version and
+Changes to master since v5.10.0 which generate diffs between the latest version and
 the current master branch of each repository.
    diff --git a/installing_fortcodes.html b/installing_fortcodes.html index 524a34b9b..885f8df8b 100644 --- a/installing_fortcodes.html +++ b/installing_fortcodes.html @@ -106,9 +106,9 @@

    Navigation

    Citing this work)

    After downloading a tar file you can do, e.g.

    -
    tar -xzf clawpack-v5.9.2.tar.gz
-cd clawpack-v5.9.2
-export CLAW=/full/path/to/clawpack-v5.9.2  # in bash
+
    tar -xzf clawpack-v5.10.0.tar.gz
+cd clawpack-v5.10.0
+export CLAW=/full/path/to/clawpack-v5.10.0  # in bash
 
    
 
    
 
    The last command sets an environment variable when using the bash shell.
@@ -126,7 +126,7 @@ 
    Navigation
    
 See Developers’ Guide for more details, but the basic commands are:
    
 
    git clone https://github.com/clawpack/clawpack.git
 cd clawpack
-git checkout v5.9.2     # or an older version; `git tag -l` to list options
+git checkout v5.10.0     # or an older version; `git tag -l` to list options
 git submodule init      # for repositories pyclaw, clawutil, visclaw, etc.
 git submodule update    # clones all the submodule repositories
 export CLAW=/full/path/to/clawpack    # in bash
diff --git a/installing_pip.html b/installing_pip.html
index 0076d19a2..28d53cdd5 100644
--- a/installing_pip.html
+++ b/installing_pip.html
@@ -104,7 +104,7 @@ 
    Navigation
    
 
    
 
    
 
    or, more specifically,
    
-
    pip install --user clawpack==v5.9.2
+
    pip install --user clawpack==v5.10.0
 
    
 
    
 
    or you can choose a previous version from the PyPi history.
    
@@ -122,7 +122,7 @@ 
    Navigation
    
 (you might want to first read the notes below to see if you
 want to change anything in this command):
    
 
    pip install --src=$HOME/clawpack_src --user --no-build-isolation -e \
-    git+https://github.com/clawpack/clawpack.git@v5.9.2#egg=clawpack
+    git+https://github.com/clawpack/clawpack.git@v5.10.0#egg=clawpack
 
    
 
    
 
    Notes:
    
@@ -135,7 +135,7 @@ 
    Navigation
    
 convert Fortran Riemann solvers to Python versions.  See
 installing_options if you want more control.
    
 
  • This will download Clawpack (via a git clone) into the directory
-$HOME/clawpack_src/clawpack-v5.9.2.  The top
+$HOME/clawpack_src/clawpack-v5.10.0.  The top
 installation directory can be changed by modifying the --src target
 (or omit this part to put it in your current working directory).
 If you have already downloaded Clawpack via a different mechanism then
@@ -152,10 +152,10 @@ 
    Navigation
    
 site-packages directory and delete everything else.)
    • 
 
  • In order to use the Fortran codes within Clawpack (classic,
 amrclaw, or geoclaw), you should then set the environment
-variable CLAW to point to the clawpack-v5.9.2 directory within
+variable CLAW to point to the clawpack-v5.10.0 directory within
 the installation directory $HOME/clawpack_src, and FC to point
 to the desired Fortran compiler, e.g. in the bash shell:
    
-
    export CLAW=$HOME/clawpack_src/clawpack-v5.9.2
+
    export CLAW=$HOME/clawpack_src/clawpack-v5.10.0
 export FC=gfortran
 
    
 
    
diff --git a/objects.inv b/objects.inv
index 3c3825d5d..906168a78 100644
Binary files a/objects.inv and b/objects.inv differ
diff --git a/release_5_10_0.html b/release_5_10_0.html
index 7393348a9..8282a3fc0 100644
--- a/release_5_10_0.html
+++ b/release_5_10_0.html
@@ -82,7 +82,7 @@ 
    Navigation
    
 
    Permanent DOI: http://doi.org/10.5281/zenodo.XX
    
 
    Changes relative to Clawpack 5.9.2 (November 4, 2023) are shown below.
    
 
    To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
    
+released, see Changes to master since v5.10.0.
    
 
    Follow the links to see changes that have been made to the master branch of
 each repository since the last release (v5.10.0) on XX.
    
 
    These changes should appear in the next release.  If you need them now,
diff --git a/release_5_6_0.html b/release_5_6_0.html
index bffd72cf5..9ffeadf44 100644
--- a/release_5_6_0.html
+++ b/release_5_6_0.html
@@ -81,7 +81,7 @@ 
    Navigation
    
 
    Clawpack 5.6.0 was released on June 2, 2019.  See Installing Clawpack.
    
 
    Changes relative to Clawpack 5.5.0 (Aug 28, 2018) are shown below.
    
 
    To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
    
+released, see Changes to master since v5.10.0.
    
 
    
 
    Changes that are not backward compatible
    
 
    
diff --git a/release_5_6_1.html b/release_5_6_1.html
index 363a06dd8..d4dd617ff 100644
--- a/release_5_6_1.html
+++ b/release_5_6_1.html
@@ -81,7 +81,7 @@ 
    Navigation
    
 
    Clawpack 5.6.1 was released on October 28, 2019. See Installing Clawpack.
    
 
    Changes relative to Clawpack 5.6.0 (June 2, 2019) are shown below.
    
 
    To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
    
+released, see Changes to master since v5.10.0.
    
 
    
 
    Changes that are not backward compatible
    
 
    $CLAW/amrclaw/src/2d/amr_module.f90 has changed, so do a make new in
diff --git a/release_5_7_0.html b/release_5_7_0.html
index 591ea9dc3..0098f61fa 100644
--- a/release_5_7_0.html
+++ b/release_5_7_0.html
@@ -83,7 +83,7 @@ 
    Navigation
    
 [DOI 10.5281/zenodo.3764278].
    
 
    Changes relative to Clawpack 5.6.1 (October 28, 2019) are shown below.
    
 
    To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
    
+released, see Changes to master since v5.10.0.
    
 
    
 
    Python support
    
 
    As of v5.7.0 we are no longer supporting Python 2.7, and Python 3.x is
diff --git a/release_5_7_1.html b/release_5_7_1.html
index 1031c3e7d..9530e23a1 100644
--- a/release_5_7_1.html
+++ b/release_5_7_1.html
@@ -83,7 +83,7 @@ 
    Navigation
    
 [DOI 10.5281/zenodo.4025432].
    
 
    Changes relative to Clawpack 5.7.0 (April 23, 2020) are shown below.
    
 
    To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
    
+released, see Changes to master since v5.10.0.
    
 
    
 
    Changes that are not backward compatible
    
 
      
diff --git a/release_5_8_0.html b/release_5_8_0.html
index 6939ae3ef..ec85148eb 100644
--- a/release_5_8_0.html
+++ b/release_5_8_0.html
@@ -82,7 +82,7 @@ 
      Navigation
      
 
      Permanent DOI: http://doi.org/10.5281/zenodo.4503024
      
 
      Changes relative to Clawpack 5.7.1 (Sept. 11, 2020) are shown below.
      
 
      To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
      
+released, see Changes to master since v5.10.0.
      
 
      
 
      Changes that are not backward compatible
      
 
        
diff --git a/release_5_8_1.html b/release_5_8_1.html
index 1782f7e24..a39b351c5 100644
--- a/release_5_8_1.html
+++ b/release_5_8_1.html
@@ -84,7 +84,7 @@ 
        Navigation
        
 
        Permanent DOI: http://doi.org/10.5281/zenodo.5595424
        
 
        Changes relative to Clawpack 5.8.0 (February 4, 2021) are shown below.
        
 
        To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
        
+released, see Changes to master since v5.10.0.
        
 
        
 
        Changes that are not backward compatible
        
 
        
diff --git a/release_5_8_2.html b/release_5_8_2.html
index 911c0669a..26d030c12 100644
--- a/release_5_8_2.html
+++ b/release_5_8_2.html
@@ -82,7 +82,7 @@ 
        Navigation
        
 
        Permanent DOI: http://doi.org/10.5281/zenodo.5781749
        
 
        Changes relative to Clawpack 5.8.1 (October 19, 2021) are shown below.
        
 
        To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
        
+released, see Changes to master since v5.10.0.
        
 
        
 
        Changes that are not backward compatible
        
 
        None.
        
diff --git a/release_5_9_0.html b/release_5_9_0.html
index 8f0ad4876..c07553c73 100644
--- a/release_5_9_0.html
+++ b/release_5_9_0.html
@@ -82,7 +82,7 @@ 
        Navigation
        
 
        Permanent DOI: http://doi.org/10.5281/zenodo.7026045
        
 
        Changes relative to Clawpack 5.8.2 (December 14, 2021) are shown below.
        
 
        To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
        
+released, see Changes to master since v5.10.0.
        
 
        Follow the links to see changes that have been made to the master branch of
 each repository since the last release (v5.9.0) on August 26, 2022.
        
 
        These changes should appear in the next release.  If you need them now,
diff --git a/release_5_9_1.html b/release_5_9_1.html
index 1a4625a1e..1110dee89 100644
--- a/release_5_9_1.html
+++ b/release_5_9_1.html
@@ -82,7 +82,7 @@ 
        Navigation
        
 
        Permanent DOI: http://doi.org/10.5281/zenodo.8400237
        
 
        Changes relative to Clawpack 5.9.0 (August 26, 2022) are shown below.
        
 
        To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
        
+released, see Changes to master since v5.10.0.
        
 
        Follow the links to see changes that have been made to the master branch of
 each repository since the last release (v5.9.1) on October 2, 2023.
        
 
        These changes should appear in the next release.  If you need them now,
diff --git a/release_5_9_2.html b/release_5_9_2.html
index 9594ed283..aac5f0109 100644
--- a/release_5_9_2.html
+++ b/release_5_9_2.html
@@ -82,7 +82,7 @@ 
        Navigation
        
 
        Permanent DOI: http://doi.org/10.5281/zenodo.XXX
        
 
        Changes relative to Clawpack 5.9.2 (October 2, 2023) are shown below.
        
 
        To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
        
+released, see Changes to master since v5.10.0.
        
 
        Follow the links to see changes that have been made to the master branch of
 each repository since the last release (v5.9.2) on November 4, 2023.
        
 
        These changes should appear in the next release.  If you need them now,
diff --git a/releases.html b/releases.html
index 8d8f4f6db..93cc047e8 100644
--- a/releases.html
+++ b/releases.html
@@ -97,7 +97,7 @@ 
        Other notes:PyClaw changelog.
 Starting with v5.9.0, changes will be recorded in the release notes along
 with those for other repositories.
        
-
      • See Changes to master since v5.9.2 for changes to the master branch on Github
+
      • See Changes to master since v5.10.0 for changes to the master branch on Github
 that are not in the most recent release.
        • 
 
      • The “dev” branch of the
 documentation (selected under Versions on the menu
@@ -114,8 +114,8 @@ 
        Releases:10.17605/osf.io/kmw6h.
 See Citing this work for more information on how best to cite Clawpack.
        
 
          
-
        • v5.10.0 release notes  – TBA
-[DOI 10.5281/zenodo.XX]
          • 
+
        • v5.10.0 release notes  – March 29, 2024
+[DOI 10.5281/zenodo.10896214]
          • 
 
        • v5.9.2 release notes  – November 4, 2023
 [DOI 10.5281/zenodo.10076317]
          • 
 
        • v5.9.1 release notes  – October 2, 2023
diff --git a/searchindex.js b/searchindex.js
index 3618dfb10..fc29536ce 100644
--- a/searchindex.js
+++ b/searchindex.js
@@ -1 +1 @@
-Search.setIndex({"docnames": ["ClawPlotAxes", "ClawPlotData", "ClawPlotFigure", "ClawPlotItem", "about", "adjoint", "amr_algorithm", "amrclaw", "amrclaw1d", "amrclaw_doxygen", "amrclaw_flowcharts", "application_documentation", "apps", "aws", "b4run", "b4step_defaults", "bc", "biblio", "bouss1d", "bouss2d", "changes_to_master", "claw43to46", "claw46to50", "claw4x", "clawpack5", "clawpack_components", "community", "contents", "contribute_apps", "current_data", "developers", "docker_image", "dtopotools_module", "f77_vs_f90", "fgmax", "fgmax_tools_module", "fgout", "fgout_tools_module", "first_run", "first_run_fortran", "first_run_pyclaw", "flagregions", "force_dry", "fortran", "fortran_compilers", "fvmbook", "galleries", "gauges", "geoclaw", "geoclaw1d", "geoclaw_started", "geoclaw_util_module", "geohints", "geoplot", "git_versions", "googleearth_plotting", "gpu", "grid_registration", "howto_doc", "howto_release", "installing", "installing_fortcodes", "installing_pip", "kmltools_module", "lagrangian_gauges", "license", "makefiles", "makefiles_library", "manning", "mapc2p", "marching_front", "matlab_plotting", "nearshore_interp", "netcdf", "newapp", "okada", "openmp", "output_styles", "packages", "photos", "plotexamples", "plotting", "plotting_faq", "plotting_geoclaw", "plotting_python", "prereqs", "pyclaw/about", "pyclaw/basics", "pyclaw/classes", "pyclaw/clawpack_and_pyclaw", "pyclaw/cloud", "pyclaw/controller", "pyclaw/evolve/limiters", "pyclaw/examples", "pyclaw/geometry", "pyclaw/going_further", "pyclaw/index", "pyclaw/io", "pyclaw/output", "pyclaw/parallel", "pyclaw/plotting", "pyclaw/problem", "pyclaw/rp", "pyclaw/solution", "pyclaw/solvers", "pyclaw/started", "pyclaw/state", "pyclaw/troubleshooting", "pyclaw/tutorial", "pyclaw/util", "python", "python_path", "qinit_defaults", "quick_surge", "quick_tsunami", "refinement", "regression", "release_5_0_0", "release_5_10_0", "release_5_1_0", "release_5_2_0", "release_5_2_1", "release_5_2_2", "release_5_3_0", "release_5_3_1", "release_5_4_0", "release_5_4_1", "release_5_5_0", "release_5_6_0", "release_5_6_1", "release_5_7_0", "release_5_7_1", "release_5_8_0", "release_5_8_1", "release_5_8_2", "release_5_9_0", "release_5_9_1", "release_5_9_2", "releases", "restart", "riemann", "riemann/Shallow_water_Riemann_solvers", "ruled_rectangles", "sealevel", "set_eta_init", "setaux_defaults", "setenv", "setplot", "setrun", "setrun_amrclaw", "setrun_amrclaw_sample", "setrun_geoclaw", "setrun_sample", "sharing", "sphere_source", "sphinxdoc", "src1d_defaults", "src_defaults", "storm_module", "surgedata", "testing", "timing", "topo", "topotools", "topotools_module", "trouble", "tsunamidata", "user_routines", "visit_plotting", "vm", "wp_algorithms"], "filenames": ["ClawPlotAxes.rst", "ClawPlotData.rst", "ClawPlotFigure.rst", "ClawPlotItem.rst", "about.rst", "adjoint.rst", "amr_algorithm.rst", "amrclaw.rst", "amrclaw1d.rst", "amrclaw_doxygen.rst", "amrclaw_flowcharts.rst", "application_documentation.rst", "apps.rst", "aws.rst", "b4run.rst", "b4step_defaults.rst", "bc.rst", "biblio.rst", "bouss1d.rst", "bouss2d.rst", "changes_to_master.rst", "claw43to46.rst", "claw46to50.rst", "claw4x.rst", "clawpack5.rst", "clawpack_components.rst", "community.rst", "contents.rst", "contribute_apps.rst", "current_data.rst", "developers.rst", "docker_image.rst", "dtopotools_module.rst", "f77_vs_f90.rst", "fgmax.rst", "fgmax_tools_module.rst", "fgout.rst", "fgout_tools_module.rst", "first_run.rst", "first_run_fortran.rst", "first_run_pyclaw.rst", "flagregions.rst", "force_dry.rst", "fortran.rst", "fortran_compilers.rst", "fvmbook.rst", "galleries.rst", "gauges.rst", "geoclaw.rst", "geoclaw1d.rst", "geoclaw_started.rst", "geoclaw_util_module.rst", "geohints.rst", "geoplot.rst", "git_versions.rst", "googleearth_plotting.rst", "gpu.rst", "grid_registration.rst", "howto_doc.rst", "howto_release.rst", "installing.rst", "installing_fortcodes.rst", "installing_pip.rst", "kmltools_module.rst", "lagrangian_gauges.rst", "license.rst", "makefiles.rst", "makefiles_library.rst", "manning.rst", "mapc2p.rst", "marching_front.rst", "matlab_plotting.rst", "nearshore_interp.rst", "netcdf.rst", "newapp.rst", "okada.rst", "openmp.rst", "output_styles.rst", "packages.rst", "photos.rst", "plotexamples.rst", "plotting.rst", "plotting_faq.rst", "plotting_geoclaw.rst", "plotting_python.rst", "prereqs.rst", "pyclaw/about.rst", "pyclaw/basics.rst", "pyclaw/classes.rst", "pyclaw/clawpack_and_pyclaw.rst", "pyclaw/cloud.rst", "pyclaw/controller.rst", "pyclaw/evolve/limiters.rst", "pyclaw/examples.rst", "pyclaw/geometry.rst", "pyclaw/going_further.rst", "pyclaw/index.rst", "pyclaw/io.rst", "pyclaw/output.rst", "pyclaw/parallel.rst", "pyclaw/plotting.rst", "pyclaw/problem.rst", "pyclaw/rp.rst", "pyclaw/solution.rst", "pyclaw/solvers.rst", "pyclaw/started.rst", "pyclaw/state.rst", "pyclaw/troubleshooting.rst", "pyclaw/tutorial.rst", "pyclaw/util.rst", "python.rst", "python_path.rst", "qinit_defaults.rst", "quick_surge.rst", "quick_tsunami.rst", "refinement.rst", "regression.rst", "release_5_0_0.rst", "release_5_10_0.rst", "release_5_1_0.rst", "release_5_2_0.rst", "release_5_2_1.rst", "release_5_2_2.rst", "release_5_3_0.rst", "release_5_3_1.rst", "release_5_4_0.rst", "release_5_4_1.rst", "release_5_5_0.rst", "release_5_6_0.rst", "release_5_6_1.rst", "release_5_7_0.rst", "release_5_7_1.rst", "release_5_8_0.rst", "release_5_8_1.rst", "release_5_8_2.rst", "release_5_9_0.rst", "release_5_9_1.rst", "release_5_9_2.rst", "releases.rst", "restart.rst", "riemann.rst", "riemann/Shallow_water_Riemann_solvers.rst", "ruled_rectangles.rst", "sealevel.rst", "set_eta_init.rst", "setaux_defaults.rst", "setenv.rst", "setplot.rst", "setrun.rst", "setrun_amrclaw.rst", "setrun_amrclaw_sample.rst", "setrun_geoclaw.rst", "setrun_sample.rst", "sharing.rst", "sphere_source.rst", "sphinxdoc.rst", "src1d_defaults.rst", "src_defaults.rst", "storm_module.rst", "surgedata.rst", "testing.rst", "timing.rst", "topo.rst", "topotools.rst", "topotools_module.rst", "trouble.rst", "tsunamidata.rst", "user_routines.rst", "visit_plotting.rst", "vm.rst", "wp_algorithms.rst"], "titles": ["ClawPlotAxes", "ClawPlotData", "ClawPlotFigure", "ClawPlotItem", "About this software", "Guiding AMR with adjoint flagging", "Adaptive mesh refinement (AMR) algorithms", "AMRClaw Description and Detailed Contents", "AMRClaw for 1d problems", "Doxygen documentation of AMRClaw", "AMRClaw Flowcharts", "Application documentation", "Clawpack Applications repository", "Amazon Web Services EC2 Clawpack AMI", "b4run function", "b4step default routines", "Boundary conditions", "Bibliography", "Boussinesq solvers in One Space Dimension", "Boussinesq solvers in Two Space Dimensions", "Changes to master since v5.9.2", "Converting from Clawpack 4.3 to 4.6", "Converting from Clawpack 4.6 to 5.0", "Clawpack 4.x links", "Changes in Clawpack 5.0", "Clawpack components", "Clawpack Community", "Full Table of Contents", "Contributing examples and applications", "current_data", "Developers\u2019 Guide", "Docker for Clawpack", "dtopotools module for moving topography", "Fortran 77 vs. Fortran 90 files", "Fixed grid monitoring (fgmax)", "fgmax_tools module for working with fgmax grids", "Fixed grid output (fgout)", "fgout_tools module for working with fgout grids", "Running an example", "Testing your Fortran installation and running an example", "Testing a PyClaw installation and running an example", "Specifying flagregions for adaptive refinement", "Force Cells to be Dry Initially", "Fortran version", "Fortran Compilers", "Examples from the book FVMHP", "Clawpack Gallery", "Gauges", "GeoClaw Description and Detailed Contents", "GeoClaw in One Space Dimension", "Getting started with GeoClaw", "geoclaw.util module of utility functions", "Cautionary Hints on using GeoClaw", "GeoClaw plotting tools", "Keeping track of repository versions with Git", "Visualizing GeoClaw results in Google Earth", "Using the GPU version of Clawpack", "Grid registration", "Guide for updating this documentation", "Guide for doing a Clawpack release", "Installing Clawpack", "Options for installing Clawpack Fortran codes", "pip install instructions", "kmltools module of utility functions", "Lagrangian gauges for particle tracking", "License", "Clawpack Makefiles", "Library routines in Makefiles", "Manning friction term", "The mapc2p function", "Marching Front algorithm", "Plotting using Matlab", "Nearshore interpolation", "Using NetCDF output", "Creating a new application directory", "Earthquake sources: Fault slip and the Okada model", "Using OpenMP", "Output data sytles and formats", "Which Clawpack solver should I use?", "Clawpack Community Photos", "Plotting examples", "Plotting with Visclaw", "Plotting hints and FAQ", "Plotting routines for GeoClaw", "Plotting options in Python", "Installation Prerequisites", "About PyClaw", "PyClaw Basics", "Understanding Pyclaw Classes", "Porting a problem from Clawpack 4.6.x to PyClaw", "Running PyClaw in the cloud", "Pyclaw Controller Class", "Pyclaw Limiters", "Working with PyClaw\u2019s built-in examples", "PyClaw Geometry", "Going Further", "PyClaw", "Pyclaw Input/Output Package", "PyClaw output", "Running in parallel", "Plotting PyClaw results", "Setting up your own problem", "Riemann Solver Package", "PyClaw Solutions", "Using PyClaw\u2019s solvers: Classic and SharpClaw", "Installing PyClaw", "PyClaw State", "Troubleshooting", "PyClaw tutorial: Solve the acoustics equations", "Pyclaw Utility Module", "Python Hints", "Python path", "qinit default routines", "Quick start guide for storm surge modeling", "Quick start guide for tsunami modeling", "AMR refinement criteria", "Regression testing", "v5.0.0 release notes", "v5.10.0 release notes", "v5.1.0 release notes", "v5.2.0 release notes", "v5.2.1 release notes", "v5.2.2 release notes", "v5.3.0 release notes", "v5.3.1 release notes", "v5.4.0 release notes", "v5.4.1 release notes", "v5.5.0 release notes", "v5.6.0 release notes", "v5.6.1 release notes", "v5.7.0 release notes", "v5.7.1 release notes", "v5.8.0 release notes", "v5.8.1 release notes", "v5.8.2 release notes", "v5.9.0 release notes", "v5.9.1 release notes", "v5.9.2 release notes", "Releases of Clawpack and release notes", "Checkpointing and restarting", "Riemann solvers", "Shallow water Riemann solvers in Clawpack", "Ruled Rectangles", "Setting sea_level", "Set Eta Init \u2013 spatially varying initial surface elevation", "setaux default routines", "Set environment variables", "Using setplot.py to specify the desired plots", "Specifying classic run-time parameters in setrun.py", "Specifying AMRClaw run-time parameters in setrun.py", "Sample setrun.py module for AMRClaw", "Specifying GeoClaw parameters in setrun.py", "Sample setrun.py module for classic Clawpack", "Saving and sharing results", "Source terms for shallow water on the sphere", "Compiling the Sphinx documentation locally", "src1d default routines", "src default routines", "Storm Specification Class and Tools", "Sources for Storm Surge Data", "Testing your installation", "Timing Statistics", "Topography data", "Python tools for working with topo and dtopo", "topotools module for working with topography data", "Troubleshooting", "Some sources of tsunami data", "User files required for the Fortran code", "Plotting with VisIt", "Clawpack Virtual Machine", "Wave-propagation algorithms"], "terms": {"For": [0, 1, 2, 3, 5, 7, 8, 9, 10, 12, 13, 16, 17, 18, 19, 21, 24, 26, 27, 28, 29, 30, 31, 32, 34, 36, 38, 40, 41, 42, 44, 45, 47, 49, 51, 52, 53, 55, 57, 58, 59, 66, 67, 70, 71, 72, 75, 76, 77, 81, 82, 84, 85, 88, 89, 93, 94, 96, 97, 98, 99, 101, 104, 105, 109, 110, 111, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 138, 140, 141, 142, 143, 144, 147, 148, 149, 150, 151, 152, 155, 158, 159, 161, 162, 164, 166, 167, 170], "usag": [0, 1, 2, 3, 13, 19, 48, 49, 51, 55, 60, 97, 127, 158, 164], "see": [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 12, 13, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 30, 31, 32, 34, 36, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 55, 56, 57, 58, 59, 60, 61, 62, 64, 65, 66, 67, 68, 70, 71, 72, 74, 75, 76, 77, 80, 81, 82, 83, 84, 85, 86, 89, 91, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 146, 147, 148, 149, 150, 151, 153, 155, 156, 157, 158, 160, 161, 162, 164, 165, 166, 167, 168, 169, 170], "us": [0, 1, 2, 3, 4, 6, 7, 8, 9, 10, 11, 12, 14, 16, 17, 21, 22, 23, 24, 25, 26, 28, 29, 30, 32, 34, 35, 37, 38, 39, 40, 42, 43, 44, 45, 47, 48, 49, 50, 51, 53, 54, 55, 57, 58, 59, 60, 61, 63, 65, 66, 68, 70, 72, 74, 75, 77, 80, 81, 82, 83, 84, 85, 86, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 99, 100, 102, 103, 105, 106, 108, 109, 110, 111, 112, 113, 115, 116, 118, 120, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 135, 136, 137, 138, 139, 142, 143, 146, 148, 149, 150, 151, 152, 154, 156, 157, 158, 161, 162, 164, 166, 168, 169, 170], "setplot": [0, 1, 2, 3, 7, 21, 22, 24, 27, 45, 47, 48, 49, 80, 81, 100, 101, 109, 118, 125, 135, 136, 165, 168], "py": [0, 1, 2, 3, 5, 6, 7, 8, 11, 13, 14, 16, 21, 22, 27, 30, 32, 34, 35, 37, 38, 39, 40, 41, 42, 43, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 58, 59, 63, 64, 66, 68, 70, 75, 77, 78, 80, 81, 83, 84, 89, 93, 96, 99, 100, 101, 105, 113, 115, 116, 118, 119, 120, 121, 122, 123, 124, 125, 127, 128, 129, 130, 131, 132, 135, 136, 137, 139, 140, 141, 143, 144, 146, 154, 158, 162, 164, 165, 167, 168], "specifi": [0, 1, 2, 3, 4, 5, 6, 7, 15, 16, 18, 19, 22, 24, 27, 29, 30, 31, 32, 34, 35, 36, 37, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 54, 55, 57, 63, 66, 67, 68, 70, 71, 72, 75, 76, 77, 78, 80, 81, 83, 88, 91, 94, 97, 98, 101, 103, 104, 107, 109, 111, 112, 113, 116, 119, 122, 123, 124, 125, 126, 127, 130, 132, 135, 136, 137, 139, 140, 142, 143, 144, 145, 150, 152, 153, 156, 157, 158, 159, 161, 162, 164, 165, 166, 168, 170], "desir": [0, 1, 2, 3, 6, 7, 16, 19, 24, 27, 28, 32, 34, 35, 36, 37, 42, 45, 47, 49, 59, 62, 63, 64, 70, 72, 75, 77, 80, 81, 82, 84, 88, 89, 91, 98, 103, 104, 112, 125, 127, 130, 144, 146, 148, 149, 150, 151, 152, 158, 162, 164, 165], "exampl": [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 13, 14, 16, 18, 22, 24, 26, 29, 30, 31, 32, 37, 41, 43, 44, 46, 48, 49, 51, 57, 58, 59, 60, 61, 63, 64, 66, 67, 68, 72, 75, 76, 77, 81, 82, 84, 86, 87, 88, 89, 91, 94, 95, 97, 98, 101, 102, 103, 104, 105, 108, 109, 110, 111, 113, 114, 115, 116, 118, 119, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 135, 136, 137, 139, 140, 141, 143, 144, 146, 147, 148, 149, 150, 151, 152, 153, 154, 158, 160, 161, 162, 164, 165, 166, 167], "object": [0, 1, 2, 3, 5, 18, 24, 29, 32, 34, 36, 37, 41, 47, 55, 63, 70, 75, 81, 82, 84, 88, 89, 91, 97, 98, 99, 101, 103, 106, 107, 108, 109, 119, 128, 136, 137, 139, 140, 148, 149, 150, 151, 152, 158, 164], "thi": [0, 1, 2, 3, 5, 6, 8, 10, 11, 12, 13, 14, 16, 17, 18, 19, 20, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 54, 55, 56, 57, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 70, 71, 72, 73, 75, 76, 77, 81, 82, 84, 85, 86, 88, 89, 91, 92, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 113, 114, 115, 116, 118, 119, 120, 122, 123, 124, 125, 126, 127, 128, 129, 130, 132, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 158, 159, 160, 161, 162, 164, 165, 166, 167, 168, 169, 170], "class": [0, 1, 2, 3, 5, 27, 32, 34, 35, 36, 37, 41, 55, 63, 75, 82, 84, 89, 94, 96, 101, 103, 104, 106, 108, 109, 110, 128, 130, 139, 142, 147, 148, 149, 150, 151, 152, 164], "ar": [0, 1, 2, 3, 4, 5, 6, 7, 9, 10, 12, 13, 15, 16, 18, 19, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 52, 53, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 70, 71, 75, 76, 77, 78, 81, 83, 84, 85, 86, 88, 89, 91, 92, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 119, 120, 121, 122, 123, 124, 125, 126, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 147, 148, 149, 150, 151, 152, 154, 155, 156, 157, 158, 159, 160, 161, 162, 164, 165, 167, 170], "usual": [0, 2, 3, 5, 6, 19, 32, 36, 42, 47, 50, 55, 63, 66, 75, 77, 93, 94, 99, 101, 102, 104, 109, 113, 115, 125, 140, 148, 149, 150, 151, 152, 165, 167], "creat": [0, 1, 2, 3, 5, 6, 7, 21, 26, 27, 30, 32, 34, 35, 36, 37, 38, 39, 41, 43, 45, 47, 48, 49, 50, 54, 56, 58, 62, 63, 66, 75, 77, 81, 82, 84, 89, 90, 93, 94, 96, 97, 100, 103, 106, 107, 108, 109, 115, 116, 118, 119, 123, 124, 125, 127, 128, 129, 132, 135, 142, 147, 148, 149, 150, 153, 155, 158, 164, 166, 167, 168], "new_plotax": [0, 2, 47, 55, 82, 147], "clawplotfigur": [0, 1, 55, 82, 136, 147], "The": [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 20, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 32, 34, 36, 37, 38, 39, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 56, 57, 58, 59, 61, 62, 63, 64, 65, 66, 67, 68, 72, 74, 75, 76, 77, 78, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 91, 92, 94, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 109, 110, 111, 113, 115, 116, 118, 119, 120, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 160, 161, 162, 164, 165, 166, 167, 168, 169, 170], "follow": [0, 2, 3, 4, 5, 6, 13, 16, 18, 19, 20, 21, 25, 26, 30, 32, 34, 38, 39, 40, 42, 47, 50, 55, 57, 58, 59, 60, 62, 65, 70, 71, 75, 77, 82, 83, 85, 86, 88, 89, 90, 93, 94, 97, 98, 99, 101, 102, 103, 105, 106, 108, 109, 111, 116, 118, 127, 132, 135, 136, 137, 139, 140, 142, 146, 147, 148, 149, 151, 158, 160, 161, 162, 165, 167, 169], "can": [0, 2, 3, 4, 5, 6, 7, 8, 9, 11, 12, 13, 14, 15, 16, 18, 19, 21, 22, 24, 26, 28, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 66, 67, 68, 70, 71, 72, 74, 75, 76, 77, 78, 80, 81, 82, 83, 84, 86, 88, 89, 90, 92, 93, 94, 96, 97, 98, 99, 100, 101, 103, 104, 105, 106, 107, 108, 109, 111, 112, 113, 115, 116, 118, 119, 120, 123, 124, 125, 126, 127, 130, 131, 132, 135, 137, 138, 139, 140, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 156, 157, 158, 160, 162, 164, 165, 166, 167, 168, 170], "set": [0, 1, 2, 3, 5, 6, 8, 13, 14, 15, 16, 18, 19, 24, 27, 29, 30, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 51, 52, 53, 54, 55, 58, 59, 61, 62, 63, 64, 66, 67, 70, 72, 74, 75, 76, 77, 78, 80, 81, 88, 89, 91, 93, 94, 95, 96, 97, 98, 99, 102, 103, 104, 105, 106, 107, 108, 109, 111, 112, 115, 116, 118, 119, 120, 123, 124, 125, 127, 129, 130, 132, 135, 136, 137, 139, 140, 141, 142, 145, 147, 148, 149, 150, 151, 152, 153, 154, 158, 159, 162, 164, 166, 167, 170], "user": [0, 2, 3, 4, 5, 6, 12, 13, 21, 22, 24, 25, 27, 28, 29, 30, 31, 34, 36, 37, 44, 49, 52, 55, 60, 62, 63, 68, 71, 75, 77, 82, 89, 90, 93, 97, 99, 107, 109, 110, 111, 115, 123, 125, 127, 129, 136, 137, 140, 148, 150, 151, 152, 155, 164, 170], "name": [0, 1, 2, 3, 5, 7, 11, 12, 13, 18, 19, 22, 24, 30, 31, 32, 35, 36, 37, 38, 39, 41, 42, 43, 47, 49, 55, 58, 59, 63, 65, 71, 82, 84, 86, 89, 91, 93, 94, 97, 98, 102, 103, 108, 109, 111, 118, 124, 127, 132, 139, 140, 142, 147, 148, 149, 150, 151, 152, 158, 164, 167, 168], "str": [0, 1, 3, 32, 63, 97, 148, 149, 158, 164], "axescmd": [0, 84], "command": [0, 1, 2, 3, 11, 13, 14, 19, 30, 43, 54, 55, 56, 59, 61, 62, 66, 74, 81, 82, 85, 88, 89, 91, 96, 99, 100, 104, 108, 109, 110, 111, 116, 136, 140, 146, 147, 148, 149, 162, 164], "ax": [0, 1, 2, 29, 32, 47, 55, 63, 71, 81, 82, 84, 147, 164], "subplot": [0, 32, 70, 84, 142], "1": [0, 2, 3, 4, 5, 6, 7, 8, 9, 13, 14, 15, 16, 17, 18, 19, 24, 32, 34, 35, 36, 38, 39, 40, 41, 47, 48, 49, 51, 52, 53, 55, 57, 58, 59, 62, 63, 64, 66, 71, 75, 77, 82, 84, 88, 89, 91, 92, 93, 94, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 115, 120, 122, 123, 125, 127, 128, 130, 132, 134, 138, 139, 140, 141, 142, 143, 145, 147, 148, 149, 150, 151, 152, 154, 158, 161, 162, 164, 165, 166, 167, 170], "singl": [0, 1, 2, 3, 5, 6, 16, 21, 24, 25, 29, 30, 32, 34, 36, 37, 42, 47, 49, 50, 55, 57, 58, 59, 63, 64, 66, 71, 75, 76, 77, 78, 88, 94, 97, 98, 103, 109, 116, 122, 123, 125, 138, 140, 144, 148, 149, 150, 151, 162, 164, 166, 167], "fill": [0, 3, 4, 6, 16, 26, 55, 70, 94, 97, 106, 113, 125, 144, 148, 158, 161, 164, 167], "figur": [0, 1, 2, 4, 13, 32, 38, 39, 42, 45, 47, 57, 63, 70, 71, 81, 84, 103, 111, 118, 135, 140, 142, 147, 164], "2": [0, 3, 4, 6, 7, 15, 16, 17, 18, 19, 24, 32, 34, 35, 36, 37, 41, 42, 47, 49, 51, 55, 57, 59, 61, 62, 63, 64, 68, 70, 71, 72, 75, 76, 77, 82, 84, 85, 88, 89, 91, 92, 94, 97, 98, 99, 101, 102, 103, 104, 105, 106, 108, 109, 111, 115, 116, 118, 119, 123, 124, 125, 127, 128, 129, 130, 131, 132, 133, 135, 136, 138, 139, 140, 142, 145, 148, 149, 150, 151, 152, 154, 158, 161, 162, 164, 167, 170], "top": [0, 1, 3, 11, 25, 31, 32, 36, 55, 58, 59, 61, 62, 75, 82, 96, 101, 102, 111, 116, 139, 146], "half": [0, 16, 17, 75, 77, 104, 135, 148, 167], "0": [0, 2, 3, 5, 6, 16, 18, 19, 21, 27, 29, 30, 32, 34, 36, 37, 41, 42, 47, 48, 49, 51, 52, 55, 56, 57, 58, 59, 63, 64, 66, 67, 68, 70, 71, 72, 75, 77, 82, 84, 85, 88, 89, 91, 92, 94, 97, 98, 99, 101, 102, 103, 104, 105, 106, 108, 109, 110, 111, 115, 121, 122, 124, 126, 129, 131, 133, 136, 138, 139, 141, 142, 143, 144, 148, 149, 150, 151, 152, 154, 161, 162, 164, 166, 167, 169, 170], "8": [0, 34, 36, 42, 47, 55, 58, 63, 70, 77, 82, 94, 107, 109, 117, 118, 129, 135, 138, 140, 142, 147, 148, 149, 151, 152], "tall": 0, "skinni": 0, "axi": [0, 32, 42, 49, 53, 55, 70, 71, 82, 94, 136, 142], "matplotlib": [0, 2, 3, 13, 32, 42, 53, 55, 70, 81, 82, 85, 87, 90, 110, 131, 141, 147, 164, 165], "document": [0, 1, 2, 3, 6, 7, 19, 20, 23, 24, 25, 26, 27, 30, 31, 34, 48, 52, 57, 62, 65, 75, 81, 82, 83, 84, 86, 92, 94, 97, 98, 99, 100, 104, 106, 109, 111, 118, 120, 133, 134, 135, 136, 137, 138, 147, 150, 154, 168, 169], "show": [0, 2, 3, 9, 10, 12, 14, 30, 32, 38, 39, 42, 46, 47, 55, 58, 59, 63, 66, 70, 71, 84, 94, 104, 108, 111, 116, 118, 123, 133, 134, 135, 142, 164, 165, 167], "bool": [0, 1, 2, 3, 51, 63, 91, 97, 102, 103, 104, 106, 109, 151, 158, 164], "If": [0, 1, 2, 3, 4, 5, 6, 12, 13, 15, 16, 18, 19, 20, 21, 22, 24, 25, 26, 27, 29, 30, 31, 32, 34, 36, 37, 38, 39, 40, 42, 43, 44, 47, 49, 51, 55, 57, 58, 59, 60, 61, 62, 63, 64, 66, 67, 68, 70, 71, 72, 75, 76, 77, 78, 80, 81, 82, 84, 85, 86, 88, 93, 94, 96, 97, 98, 99, 101, 103, 104, 105, 106, 107, 109, 111, 113, 114, 115, 116, 118, 125, 126, 127, 128, 129, 130, 132, 135, 136, 137, 139, 140, 141, 142, 143, 144, 145, 146, 148, 149, 150, 151, 152, 156, 157, 158, 160, 162, 164, 165, 167, 170], "fals": [0, 1, 2, 3, 5, 32, 37, 42, 52, 53, 54, 55, 63, 70, 77, 91, 94, 97, 102, 103, 104, 106, 109, 124, 125, 130, 135, 139, 141, 148, 149, 150, 151, 152, 158, 164], "suppress": [0, 2, 3, 30, 55, 63, 124, 126, 148, 149], "all": [0, 1, 4, 6, 11, 12, 13, 16, 19, 22, 24, 25, 27, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 42, 43, 44, 47, 48, 51, 52, 54, 55, 57, 58, 59, 60, 61, 63, 64, 65, 66, 67, 71, 72, 74, 75, 76, 77, 78, 81, 82, 84, 85, 86, 88, 91, 92, 94, 96, 97, 98, 99, 101, 102, 103, 104, 106, 109, 110, 111, 114, 115, 116, 118, 119, 120, 123, 124, 125, 127, 130, 132, 138, 139, 140, 141, 142, 144, 147, 148, 149, 150, 151, 152, 153, 159, 160, 161, 162, 164, 165, 167], "item": [0, 1, 3, 71, 81, 84, 109, 132, 137, 147], "titl": [0, 1, 4, 17, 26, 42, 47, 55, 63, 70, 81, 96, 125, 136, 142, 164], "appear": [0, 1, 3, 5, 8, 13, 20, 25, 30, 34, 36, 47, 48, 49, 55, 58, 63, 66, 69, 82, 98, 103, 106, 118, 125, 132, 135, 136, 137, 151, 153, 162], "default": [0, 1, 2, 3, 13, 18, 19, 24, 30, 32, 34, 36, 37, 44, 47, 48, 51, 53, 54, 55, 57, 62, 63, 64, 66, 67, 71, 72, 75, 76, 77, 82, 84, 88, 91, 93, 94, 97, 98, 99, 100, 103, 104, 106, 107, 109, 115, 118, 119, 125, 129, 130, 132, 135, 136, 137, 139, 143, 149, 150, 151, 154, 158, 162, 164, 167], "string": [0, 1, 3, 7, 32, 34, 37, 47, 49, 51, 55, 57, 63, 64, 82, 89, 91, 92, 94, 97, 98, 103, 109, 111, 118, 136, 148, 151, 158, 164], "new": [0, 1, 2, 4, 5, 6, 8, 12, 13, 19, 20, 22, 24, 26, 27, 30, 31, 32, 34, 35, 36, 37, 41, 42, 43, 44, 47, 48, 51, 55, 56, 57, 59, 62, 63, 64, 66, 67, 68, 70, 71, 76, 77, 82, 84, 87, 88, 89, 90, 91, 97, 99, 101, 104, 106, 113, 115, 118, 119, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 135, 136, 137, 139, 140, 142, 143, 144, 146, 148, 149, 151, 158, 162, 164, 167], "v5": [0, 5, 14, 30, 31, 34, 36, 41, 45, 47, 56, 58, 59, 61, 62, 67, 77, 103, 110, 111, 115, 138, 139, 143, 144, 149, 151, 154], "9": [0, 34, 36, 37, 42, 47, 55, 59, 61, 62, 63, 64, 77, 82, 94, 97, 103, 118, 125, 128, 129, 130, 131, 132, 133, 134, 138, 139, 142, 148, 151, 152, 154], "note": [0, 1, 3, 4, 5, 13, 15, 16, 19, 22, 24, 26, 27, 30, 32, 34, 35, 36, 37, 41, 42, 43, 44, 47, 49, 51, 55, 56, 57, 58, 59, 60, 61, 62, 63, 66, 67, 70, 75, 76, 82, 84, 89, 92, 93, 94, 96, 97, 99, 101, 102, 105, 106, 109, 110, 112, 115, 139, 140, 142, 143, 144, 145, 147, 148, 149, 150, 151, 152, 156, 157, 158, 159, 161, 162, 164, 166, 167], "now": [0, 5, 6, 7, 13, 20, 22, 24, 26, 28, 30, 31, 32, 34, 35, 36, 37, 41, 42, 44, 54, 57, 58, 59, 68, 70, 72, 75, 77, 82, 88, 89, 94, 96, 97, 98, 99, 100, 101, 103, 104, 105, 108, 113, 115, 116, 118, 119, 120, 123, 124, 125, 126, 127, 129, 130, 132, 133, 135, 136, 137, 143, 147, 149, 153, 162, 169], "includ": [0, 2, 4, 6, 13, 18, 19, 20, 23, 24, 25, 29, 30, 31, 32, 34, 36, 37, 38, 39, 41, 43, 44, 46, 47, 49, 52, 55, 57, 59, 61, 62, 63, 65, 67, 68, 70, 71, 72, 75, 76, 78, 81, 82, 84, 86, 88, 89, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 108, 111, 113, 115, 116, 118, 119, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 140, 141, 142, 146, 148, 150, 151, 153, 154, 155, 158, 159, 161, 162, 164, 167], "h": [0, 16, 17, 18, 19, 34, 36, 37, 42, 47, 48, 49, 52, 55, 56, 63, 68, 72, 102, 115, 123, 130, 136, 141, 143, 144, 151, 162], "m": [0, 4, 17, 18, 22, 24, 30, 32, 47, 48, 51, 55, 56, 58, 59, 63, 70, 71, 75, 77, 89, 115, 122, 136, 140, 142, 151, 164, 167, 170], "": [0, 1, 3, 4, 6, 13, 17, 22, 27, 30, 31, 32, 34, 36, 37, 38, 40, 41, 42, 47, 51, 55, 56, 58, 59, 62, 63, 64, 66, 70, 75, 76, 78, 81, 84, 87, 89, 91, 92, 94, 95, 96, 97, 99, 100, 101, 102, 103, 106, 108, 110, 113, 115, 116, 124, 136, 140, 142, 147, 148, 149, 151, 158, 161, 164, 165, 166, 167], "d": [0, 4, 7, 17, 30, 32, 51, 55, 58, 63, 93, 102, 111, 116, 118, 136, 140], "describ": [0, 3, 4, 5, 6, 7, 13, 14, 16, 18, 19, 21, 28, 30, 32, 33, 34, 36, 38, 39, 41, 42, 47, 49, 50, 51, 52, 55, 56, 58, 59, 61, 63, 64, 66, 67, 70, 71, 75, 77, 78, 81, 82, 83, 94, 96, 97, 103, 109, 113, 115, 116, 118, 125, 128, 129, 135, 140, 142, 143, 147, 148, 149, 151, 158, 159, 162, 164, 166, 167, 170], "further": [0, 6, 16, 19, 27, 34, 36, 44, 52, 63, 66, 71, 96, 110, 115, 116, 135, 136, 149], "below": [0, 3, 6, 13, 15, 16, 18, 19, 20, 24, 26, 30, 31, 32, 34, 36, 42, 47, 48, 49, 55, 56, 58, 59, 62, 63, 68, 71, 75, 84, 86, 88, 90, 98, 102, 108, 111, 112, 115, 116, 118, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 140, 142, 145, 146, 147, 148, 149, 150, 151, 152, 156, 157, 158, 162, 164, 167], "case": [0, 5, 6, 8, 13, 16, 19, 21, 24, 32, 34, 36, 41, 44, 47, 48, 49, 52, 55, 62, 63, 67, 70, 71, 72, 75, 77, 82, 88, 94, 97, 99, 101, 103, 109, 111, 115, 116, 118, 120, 123, 124, 125, 126, 127, 132, 135, 136, 139, 142, 143, 149, 151, 158, 162, 164, 165, 167, 170], "title_with_t": [0, 82], "true": [0, 1, 2, 3, 5, 6, 15, 16, 29, 32, 35, 37, 42, 47, 51, 54, 55, 58, 63, 70, 77, 81, 88, 91, 94, 97, 98, 99, 103, 104, 106, 115, 118, 125, 136, 139, 140, 142, 144, 145, 148, 149, 150, 151, 152, 158, 164], "title_fonts": [0, 136], "float": [0, 3, 32, 34, 37, 47, 51, 63, 91, 94, 97, 102, 106, 109, 148, 149, 151, 152, 158, 164], "fontsiz": [0, 82], "title_kwarg": [0, 136], "ani": [0, 3, 4, 5, 6, 8, 13, 16, 18, 19, 20, 21, 22, 24, 29, 30, 31, 34, 36, 37, 38, 39, 40, 47, 48, 49, 52, 54, 55, 58, 59, 61, 62, 64, 65, 66, 68, 70, 71, 72, 74, 76, 77, 78, 82, 86, 92, 93, 94, 96, 97, 98, 99, 101, 103, 105, 109, 111, 114, 115, 116, 118, 123, 127, 129, 135, 136, 137, 139, 142, 143, 144, 147, 148, 149, 151, 158, 167, 170], "other": [0, 3, 4, 5, 6, 7, 9, 12, 13, 16, 19, 22, 24, 29, 30, 32, 35, 36, 37, 38, 39, 41, 47, 48, 49, 50, 52, 55, 56, 57, 59, 60, 61, 62, 65, 66, 68, 70, 71, 72, 75, 76, 77, 81, 84, 86, 88, 89, 91, 94, 96, 97, 98, 100, 101, 102, 105, 108, 110, 111, 115, 116, 119, 120, 122, 123, 125, 140, 143, 146, 147, 148, 151, 153, 158, 162, 164, 166, 167, 168], "kwarg": [0, 2, 3, 32, 63, 82, 109, 116, 118, 136, 147, 158], "pass": [0, 3, 16, 21, 22, 30, 32, 37, 47, 49, 55, 63, 76, 82, 88, 91, 93, 95, 101, 104, 106, 107, 109, 116, 135, 140, 150, 158, 164, 167], "plt": [0, 63, 141], "e": [0, 1, 3, 5, 8, 12, 13, 14, 16, 22, 24, 29, 30, 31, 32, 34, 36, 37, 44, 47, 49, 50, 51, 54, 55, 57, 58, 59, 60, 61, 62, 63, 64, 66, 67, 68, 70, 71, 74, 75, 76, 77, 78, 81, 84, 85, 89, 94, 96, 97, 99, 100, 101, 102, 103, 104, 107, 109, 110, 111, 115, 116, 118, 123, 124, 125, 126, 127, 135, 136, 137, 140, 142, 143, 144, 146, 147, 148, 149, 150, 151, 152, 158, 162, 164, 165, 166, 167, 170], "g": [0, 1, 3, 4, 5, 8, 12, 13, 14, 16, 17, 22, 24, 29, 30, 31, 32, 34, 36, 37, 44, 47, 49, 50, 54, 55, 58, 59, 60, 61, 62, 63, 64, 66, 68, 70, 71, 74, 75, 76, 77, 78, 81, 84, 85, 96, 99, 100, 101, 102, 103, 104, 110, 111, 115, 116, 118, 123, 124, 125, 126, 127, 135, 136, 137, 140, 142, 143, 146, 147, 148, 149, 150, 151, 152, 162, 164, 165, 167, 170], "color": [0, 2, 3, 32, 42, 55, 63, 70, 71, 81, 136, 142, 147, 164], "format": [0, 1, 3, 5, 13, 14, 27, 32, 35, 38, 39, 42, 47, 48, 50, 52, 53, 55, 57, 63, 64, 66, 70, 71, 73, 75, 81, 82, 88, 91, 97, 98, 100, 101, 103, 109, 113, 124, 125, 127, 130, 132, 135, 136, 148, 151, 158, 159, 164, 166, 168], "like": [0, 12, 13, 18, 26, 30, 31, 42, 44, 55, 58, 59, 63, 64, 71, 84, 89, 91, 94, 97, 98, 99, 102, 103, 104, 106, 110, 111, 116, 124, 140, 142, 147, 161, 162, 165], "time": [0, 1, 5, 6, 7, 10, 14, 16, 18, 19, 22, 24, 27, 29, 30, 32, 34, 36, 37, 38, 39, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 55, 57, 58, 63, 64, 71, 72, 75, 76, 77, 78, 82, 86, 88, 91, 92, 96, 97, 98, 104, 106, 108, 115, 116, 118, 119, 122, 124, 125, 127, 128, 129, 132, 135, 136, 137, 139, 140, 142, 144, 146, 147, 150, 152, 158, 162, 165, 166, 170], "t": [0, 1, 4, 5, 12, 13, 17, 19, 26, 29, 30, 31, 32, 34, 36, 37, 42, 47, 49, 58, 59, 62, 64, 66, 67, 70, 71, 75, 76, 77, 82, 84, 88, 89, 92, 93, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 108, 110, 116, 122, 131, 135, 136, 142, 148, 150, 152, 158, 162, 164, 165, 167, 168, 170], "14": [0, 34, 55, 75, 82, 134, 135, 138, 142], "8e": [0, 82], "And": [0, 6, 19, 22, 58, 61], "rather": [0, 5, 6, 18, 22, 24, 30, 31, 34, 36, 37, 42, 58, 59, 62, 66, 67, 68, 74, 75, 94, 99, 101, 104, 111, 112, 115, 118, 123, 124, 125, 127, 129, 130, 132, 135, 136, 138, 139, 142, 147, 148, 149, 158, 159, 162, 164, 167, 170], "than": [0, 3, 5, 6, 13, 16, 18, 19, 22, 24, 30, 31, 32, 34, 36, 37, 42, 47, 49, 55, 58, 59, 62, 63, 64, 66, 67, 68, 70, 72, 74, 75, 77, 81, 84, 88, 89, 91, 94, 97, 98, 99, 101, 102, 104, 109, 111, 115, 116, 118, 119, 122, 123, 124, 125, 126, 127, 129, 130, 132, 135, 136, 138, 139, 142, 143, 144, 147, 148, 149, 151, 158, 159, 161, 162, 164, 167, 170], "8f": [0, 82], "001": [0, 36, 82, 92], "1000": [0, 57, 71, 82, 162], "A": [0, 2, 3, 4, 5, 6, 7, 11, 17, 18, 21, 22, 24, 31, 32, 37, 38, 39, 45, 48, 49, 51, 55, 58, 59, 63, 64, 65, 66, 68, 71, 75, 84, 86, 88, 89, 93, 94, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 108, 115, 116, 119, 125, 127, 128, 129, 130, 132, 135, 136, 140, 141, 148, 151, 158, 164, 170], "differ": [0, 1, 3, 6, 7, 12, 15, 16, 18, 19, 24, 30, 31, 32, 33, 36, 37, 38, 39, 42, 47, 49, 50, 52, 54, 57, 61, 63, 66, 68, 70, 71, 75, 76, 81, 84, 88, 89, 91, 93, 94, 96, 97, 102, 104, 109, 110, 111, 112, 115, 116, 123, 124, 125, 126, 127, 130, 132, 133, 140, 143, 144, 145, 146, 148, 149, 150, 151, 156, 157, 162, 164, 165, 166, 167, 170], "title_t_format": [0, 136], "contain": [0, 1, 3, 5, 12, 13, 18, 19, 22, 25, 27, 28, 32, 34, 35, 36, 37, 38, 39, 40, 43, 45, 46, 47, 48, 49, 51, 53, 54, 55, 56, 57, 58, 59, 63, 64, 66, 67, 70, 71, 77, 78, 82, 84, 85, 88, 89, 91, 92, 94, 96, 97, 99, 101, 102, 103, 104, 106, 108, 109, 110, 111, 115, 116, 119, 120, 127, 128, 138, 140, 142, 147, 148, 151, 153, 158, 162, 164, 165, 167], "i": [0, 1, 2, 3, 4, 5, 6, 7, 8, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 46, 47, 48, 49, 50, 51, 52, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 70, 71, 72, 73, 74, 75, 76, 77, 81, 82, 83, 84, 85, 86, 88, 89, 90, 91, 92, 94, 95, 96, 97, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 122, 123, 124, 125, 126, 127, 128, 129, 130, 132, 134, 135, 136, 137, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 154, 155, 156, 157, 158, 159, 160, 161, 162, 164, 165, 166, 167, 168, 169, 170], "dai": [0, 6, 13, 55, 136, 151], "hour": [0, 13, 36, 55, 63, 136], "minut": [0, 36, 42, 51, 55, 58, 63, 136, 143, 164, 166], "second": [0, 3, 16, 18, 19, 32, 34, 39, 47, 49, 51, 55, 63, 71, 88, 94, 98, 104, 115, 119, 125, 136, 139, 148, 151, 158, 160, 161, 164, 167, 170], "otherwis": [0, 5, 32, 58, 62, 65, 70, 86, 98, 102, 103, 104, 105, 106, 109, 115, 136, 137, 148, 154, 164], "you": [0, 2, 3, 4, 5, 12, 13, 14, 15, 16, 18, 19, 20, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 34, 35, 36, 37, 38, 39, 40, 41, 43, 44, 45, 47, 51, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 66, 67, 70, 71, 74, 75, 76, 77, 78, 80, 81, 82, 84, 85, 86, 88, 89, 90, 91, 93, 96, 97, 98, 99, 100, 101, 102, 104, 105, 106, 107, 108, 110, 111, 112, 113, 114, 116, 118, 119, 124, 125, 126, 127, 130, 132, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 149, 150, 151, 152, 153, 155, 156, 157, 158, 160, 162, 165, 166, 167, 169], "could": [0, 5, 12, 13, 29, 34, 37, 38, 39, 42, 47, 57, 58, 64, 70, 72, 75, 76, 77, 82, 84, 88, 94, 98, 106, 107, 111, 123, 132, 142, 144, 149, 150, 151, 152, 164, 167], "plotax": [0, 3, 47, 82, 130, 147], "surfac": [0, 17, 24, 27, 32, 34, 36, 37, 42, 47, 48, 50, 52, 55, 72, 75, 81, 83, 89, 96, 108, 112, 115, 123, 142, 143, 151, 162], "elev": [0, 24, 27, 34, 42, 48, 50, 52, 55, 57, 63, 72, 81, 112, 115, 130, 142, 143, 151, 162, 164, 166], "after": [0, 1, 3, 5, 6, 12, 13, 21, 25, 29, 30, 31, 34, 35, 36, 38, 39, 42, 47, 49, 52, 58, 59, 61, 63, 64, 66, 67, 70, 71, 77, 82, 89, 90, 91, 93, 98, 104, 106, 111, 115, 116, 118, 119, 123, 124, 136, 141, 144, 148, 149, 150, 152, 158, 167], "earthquak": [0, 19, 27, 32, 48, 49, 52, 114, 144, 151, 159, 162], "none": [0, 1, 2, 3, 16, 26, 29, 32, 35, 37, 42, 47, 51, 55, 63, 70, 77, 91, 94, 97, 98, 103, 104, 106, 109, 116, 118, 119, 125, 127, 128, 129, 130, 131, 134, 135, 136, 139, 148, 150, 152, 158, 164], "instead": [0, 2, 3, 13, 19, 34, 38, 39, 42, 44, 47, 49, 56, 58, 59, 62, 66, 67, 105, 106, 109, 111, 124, 125, 128, 132, 135, 139, 140, 141, 142, 151, 162, 164], "convent": [0, 3, 24, 32, 50, 57, 75, 102, 162], "mention": [0, 19, 96, 148, 149], "abov": [0, 3, 5, 13, 14, 16, 19, 22, 30, 34, 36, 38, 39, 41, 42, 43, 44, 47, 49, 52, 55, 57, 58, 59, 62, 65, 67, 70, 72, 75, 77, 82, 85, 86, 89, 98, 100, 105, 108, 109, 115, 118, 125, 127, 132, 135, 140, 142, 144, 146, 147, 148, 150, 151, 152, 158, 161, 162, 164, 167], "intern": [0, 6, 32, 47, 57, 63, 75, 125, 149, 162, 164, 170], "t_str": 0, "title_str": 0, "xlimit": [0, 47, 55, 130], "arrai": [0, 3, 6, 15, 19, 22, 24, 29, 32, 34, 35, 37, 41, 47, 48, 51, 53, 57, 63, 82, 88, 89, 91, 92, 94, 96, 97, 98, 101, 102, 103, 104, 106, 108, 109, 110, 119, 120, 121, 125, 127, 130, 132, 136, 140, 141, 142, 145, 148, 149, 150, 151, 152, 158, 162, 164, 167], "xmin": [0, 37], "xmax": [0, 37], "auto": [0, 47, 89], "x": [0, 2, 3, 5, 8, 13, 16, 19, 22, 25, 27, 29, 30, 31, 32, 34, 35, 36, 37, 41, 42, 45, 47, 48, 49, 50, 51, 55, 56, 57, 58, 59, 63, 70, 71, 72, 75, 77, 81, 82, 85, 88, 91, 92, 94, 95, 96, 98, 99, 101, 102, 103, 106, 107, 108, 110, 115, 116, 118, 130, 136, 140, 141, 142, 144, 148, 149, 150, 151, 162, 164, 167, 170], "limit": [0, 4, 6, 12, 27, 32, 35, 41, 52, 55, 63, 65, 71, 76, 81, 86, 88, 89, 94, 96, 104, 115, 121, 142, 148, 149, 150, 152, 162, 164, 170], "an": [0, 1, 2, 3, 4, 5, 6, 9, 11, 12, 16, 17, 18, 19, 22, 24, 26, 27, 29, 30, 31, 32, 34, 35, 36, 37, 41, 42, 43, 44, 47, 48, 49, 51, 52, 54, 59, 60, 61, 62, 63, 67, 68, 71, 72, 75, 76, 77, 81, 82, 84, 86, 88, 89, 90, 91, 94, 95, 96, 97, 98, 100, 101, 102, 103, 104, 105, 107, 108, 109, 111, 113, 116, 117, 119, 121, 123, 124, 125, 127, 128, 129, 130, 132, 133, 135, 136, 137, 139, 140, 141, 142, 144, 147, 148, 149, 151, 153, 156, 157, 158, 159, 162, 164, 165, 166, 167], "two": [0, 3, 4, 7, 8, 15, 17, 18, 24, 27, 30, 32, 34, 36, 37, 47, 48, 49, 51, 55, 56, 58, 63, 71, 72, 77, 82, 88, 94, 97, 98, 101, 104, 107, 109, 113, 114, 115, 116, 118, 119, 123, 124, 127, 129, 139, 140, 142, 145, 146, 150, 162, 164, 167, 170], "element": [0, 3, 24, 37, 63, 102, 104, 106, 148, 149, 150, 151], "choos": [0, 7, 60, 62, 63, 75, 101, 118, 148, 151], "automat": [0, 2, 3, 8, 11, 16, 32, 38, 39, 44, 55, 59, 66, 81, 82, 84, 88, 93, 97, 99, 105, 106, 107, 109, 116, 119, 130, 132, 148, 149, 151, 162], "ylimit": [0, 47, 55, 130, 147], "ymin": [0, 37], "ymax": [0, 37], "y": [0, 2, 3, 4, 8, 16, 17, 19, 29, 32, 34, 35, 36, 37, 41, 42, 47, 49, 50, 51, 55, 57, 59, 63, 70, 71, 75, 77, 88, 94, 98, 99, 101, 115, 118, 126, 136, 140, 141, 142, 144, 148, 149, 150, 151, 162, 164], "xticks_fonts": [0, 136], "xtick": [0, 42, 53], "mark": [0, 16, 55, 70, 115, 116], "label": [0, 32, 36, 53, 55, 57, 63, 118, 123, 135, 136, 142, 162, 164], "xticks_kwarg": [0, 136], "dictionari": [0, 1, 2, 3, 32, 37, 47, 64, 82, 88, 91, 97, 102, 103, 106, 108, 111, 158, 162, 164], "locat": [0, 5, 6, 7, 13, 19, 32, 34, 36, 49, 50, 51, 55, 57, 62, 64, 71, 72, 77, 94, 98, 100, 102, 103, 109, 111, 113, 115, 124, 126, 143, 144, 151, 158, 159, 164], "xlabel": [0, 136], "xlabel_fonts": [0, 136], "xlabel_kwarg": [0, 136], "yticks_fonts": [0, 136], "ytick": 0, "yticks_kwarg": [0, 136], "ylabel": [0, 136], "ylabel_fonts": [0, 136], "ylabel_kwarg": [0, 136], "aspect": [0, 12, 26, 31, 46, 52, 53, 71, 136, 164], "ratio": [0, 3, 6, 15, 24, 49, 53, 71, 75, 92, 102, 104, 145, 148, 149, 150], "gca": [0, 42, 53, 70], "set_aspect": [0, 42, 53, 70], "aspect_latitud": [0, 136], "longitud": [0, 32, 34, 37, 50, 51, 57, 63, 70, 75, 81, 123, 142, 151, 158, 164], "latitud": [0, 15, 32, 34, 37, 49, 50, 51, 57, 75, 81, 123, 142, 145, 151, 154, 158, 164], "coordin": [0, 4, 25, 32, 34, 36, 48, 51, 63, 77, 81, 88, 94, 98, 99, 108, 115, 142, 151, 164], "chose": [0, 68, 137], "so": [0, 5, 6, 8, 9, 13, 16, 18, 19, 21, 24, 29, 30, 31, 32, 35, 36, 37, 38, 39, 41, 42, 43, 44, 45, 47, 49, 52, 53, 55, 56, 57, 58, 59, 60, 63, 64, 66, 67, 70, 71, 72, 75, 76, 77, 78, 81, 82, 85, 88, 89, 90, 97, 98, 101, 106, 108, 109, 113, 115, 116, 118, 119, 120, 124, 125, 126, 127, 128, 129, 130, 132, 135, 136, 140, 142, 143, 144, 147, 148, 149, 150, 151, 154, 158, 161, 162, 164, 166, 167, 168], "distanc": [0, 32, 36, 49, 51, 55, 75, 151, 162, 164], "meter": [0, 18, 19, 32, 49, 51, 55, 70, 72, 75, 115, 143, 151, 158, 164, 166], "same": [0, 3, 5, 6, 8, 13, 16, 18, 19, 24, 27, 30, 33, 34, 35, 36, 37, 42, 44, 47, 49, 50, 51, 52, 55, 57, 58, 59, 62, 63, 64, 66, 68, 70, 75, 77, 78, 81, 82, 83, 84, 88, 92, 94, 96, 97, 98, 101, 102, 104, 109, 110, 118, 119, 120, 124, 125, 130, 132, 136, 139, 140, 142, 148, 149, 150, 151, 156, 162, 164, 167], "cover": [0, 6, 7, 29, 30, 32, 34, 36, 37, 41, 42, 55, 63, 70, 75, 115, 120, 125, 144, 150, 162], "broad": [0, 164], "rang": [0, 3, 5, 13, 32, 47, 51, 55, 115, 119, 124, 141, 142], "middl": [0, 102, 124], "most": [0, 3, 19, 22, 24, 29, 31, 34, 36, 38, 39, 43, 44, 47, 49, 52, 54, 55, 56, 57, 58, 61, 63, 66, 70, 71, 76, 77, 78, 81, 82, 84, 86, 94, 98, 99, 104, 107, 108, 110, 115, 116, 118, 124, 126, 132, 135, 137, 138, 139, 140, 141, 142, 143, 147, 148, 149, 151, 154, 155, 167], "interest": [0, 5, 12, 16, 17, 19, 20, 25, 29, 31, 34, 36, 37, 42, 53, 71, 72, 89, 106, 113, 115, 116, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 144, 148, 158], "gener": [0, 1, 2, 3, 4, 5, 6, 7, 9, 11, 13, 14, 16, 17, 18, 19, 21, 22, 26, 27, 30, 31, 34, 36, 41, 42, 43, 44, 47, 48, 49, 52, 55, 57, 59, 61, 64, 66, 67, 68, 72, 75, 76, 77, 81, 82, 83, 84, 86, 89, 90, 92, 94, 99, 100, 101, 103, 104, 105, 108, 109, 111, 113, 115, 119, 123, 125, 136, 139, 142, 143, 146, 148, 149, 153, 159, 161, 162, 167, 168], "appropri": [0, 4, 5, 6, 13, 16, 19, 26, 30, 48, 52, 53, 55, 59, 61, 63, 64, 68, 71, 74, 76, 88, 91, 92, 93, 97, 99, 100, 101, 102, 103, 116, 129, 140, 143, 148, 158, 167, 170], "valu": [0, 3, 5, 6, 7, 16, 18, 19, 22, 24, 29, 32, 35, 36, 37, 38, 39, 41, 42, 44, 47, 48, 49, 51, 53, 54, 55, 57, 63, 64, 66, 68, 70, 71, 72, 75, 76, 77, 82, 89, 94, 96, 97, 98, 101, 102, 103, 104, 106, 108, 109, 115, 116, 119, 120, 122, 123, 125, 127, 129, 130, 132, 135, 139, 140, 142, 143, 144, 148, 149, 150, 151, 152, 154, 158, 159, 162, 164, 165, 167, 170], "np": [0, 32, 41, 88, 94, 98, 101, 141, 150], "co": [0, 26, 32, 37, 42, 51, 53, 59, 70, 88, 101, 144], "pi": [0, 42, 51, 53, 70, 88, 101], "180": [0, 32, 42, 53, 63, 70, 75], "useoffset": [0, 42, 53, 136], "boolean": [0, 3, 55, 70, 97, 102, 148, 149, 151], "tick": [0, 55, 136], "mai": [0, 1, 2, 3, 4, 5, 6, 12, 13, 17, 19, 20, 21, 22, 24, 25, 26, 27, 29, 30, 31, 32, 34, 36, 37, 38, 39, 40, 42, 43, 44, 49, 50, 51, 52, 53, 55, 57, 58, 61, 62, 65, 66, 68, 70, 71, 72, 75, 76, 81, 82, 84, 85, 86, 89, 90, 93, 94, 96, 97, 98, 101, 103, 104, 107, 109, 111, 115, 116, 118, 121, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 142, 143, 144, 146, 147, 148, 149, 150, 151, 158, 159, 160, 162, 164, 165, 167], "offset": [0, 53, 55, 63, 158, 164], "from": [0, 1, 3, 4, 5, 6, 7, 12, 14, 15, 16, 17, 18, 19, 20, 25, 28, 29, 31, 34, 36, 38, 39, 41, 46, 47, 48, 49, 52, 55, 56, 57, 59, 60, 61, 62, 64, 65, 66, 67, 71, 72, 74, 75, 77, 81, 82, 86, 87, 88, 90, 91, 94, 95, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 108, 109, 111, 112, 113, 115, 116, 118, 119, 120, 123, 124, 125, 127, 130, 131, 132, 135, 136, 137, 138, 139, 140, 141, 143, 144, 145, 148, 149, 150, 151, 152, 154, 156, 157, 158, 159, 160, 162, 165, 166, 167, 168], "some": [0, 3, 4, 5, 6, 7, 8, 10, 12, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 27, 29, 30, 32, 34, 36, 37, 38, 39, 42, 44, 47, 48, 49, 50, 52, 53, 55, 56, 57, 58, 59, 62, 67, 70, 75, 76, 77, 81, 83, 84, 86, 89, 90, 92, 96, 97, 98, 100, 101, 103, 105, 106, 107, 108, 110, 111, 113, 114, 115, 116, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 140, 142, 143, 144, 147, 148, 149, 150, 152, 153, 154, 158, 159, 161, 162, 164, 167], "common": [0, 3, 18, 19, 25, 30, 38, 39, 43, 44, 66, 67, 78, 81, 88, 102, 104, 106, 107, 118, 125, 127, 130, 136, 165, 167], "print": [0, 1, 3, 7, 31, 37, 42, 55, 57, 63, 64, 70, 71, 82, 94, 98, 99, 100, 106, 108, 110, 111, 119, 120, 123, 125, 126, 127, 134, 142, 148, 150, 152, 158, 165], "corner": [0, 3, 32, 34, 57, 75, 77, 94, 142, 148, 150, 152, 162, 164], "often": [0, 6, 11, 13, 16, 19, 22, 29, 31, 34, 37, 38, 39, 43, 44, 47, 48, 52, 53, 54, 63, 64, 68, 72, 75, 77, 98, 110, 111, 115, 116, 132, 136, 139, 140, 142, 143, 144, 147, 148, 151, 158, 162, 166, 167, 170], "nicer": [0, 84, 136], "full": [0, 5, 6, 14, 19, 37, 59, 61, 62, 63, 77, 82, 91, 98, 104, 108, 135, 146, 148, 162, 167], "each": [0, 1, 2, 3, 5, 6, 7, 12, 16, 18, 19, 20, 24, 32, 34, 36, 37, 45, 47, 49, 51, 55, 57, 58, 59, 63, 64, 67, 70, 71, 72, 75, 76, 77, 80, 81, 82, 84, 88, 89, 92, 94, 97, 98, 99, 101, 102, 103, 104, 106, 108, 115, 116, 118, 119, 120, 124, 125, 127, 128, 130, 135, 136, 137, 139, 140, 141, 142, 144, 147, 148, 149, 150, 151, 152, 158, 161, 162, 164, 166, 170], "which": [0, 1, 3, 4, 5, 6, 7, 11, 12, 13, 14, 16, 18, 19, 22, 24, 27, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 45, 46, 47, 49, 50, 52, 55, 57, 58, 59, 60, 61, 62, 63, 64, 66, 68, 70, 71, 72, 75, 76, 77, 82, 84, 85, 88, 89, 91, 92, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 107, 108, 109, 110, 113, 115, 116, 118, 119, 120, 123, 125, 127, 128, 130, 132, 135, 136, 137, 139, 140, 141, 142, 143, 144, 148, 149, 150, 151, 154, 158, 159, 162, 164, 166, 167, 169, 170], "should": [0, 1, 2, 3, 4, 5, 6, 12, 13, 14, 16, 19, 20, 21, 22, 24, 25, 27, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 47, 49, 52, 55, 57, 58, 59, 60, 61, 62, 63, 66, 68, 70, 71, 74, 75, 76, 77, 81, 82, 84, 89, 94, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 108, 109, 111, 112, 115, 116, 118, 119, 120, 123, 125, 126, 127, 130, 135, 136, 137, 139, 140, 141, 143, 144, 146, 147, 148, 149, 150, 151, 152, 153, 158, 160, 162, 164, 165, 167, 169, 170], "ticklabel_format": [0, 42, 53], "issu": [0, 19, 24, 26, 28, 58, 59, 62, 71, 88, 93, 94, 96, 104, 105, 107, 116, 118, 119, 124, 125, 126, 127, 140, 151, 165], "grid": [0, 4, 7, 17, 18, 19, 21, 22, 24, 25, 27, 29, 30, 41, 42, 47, 48, 50, 52, 55, 56, 63, 70, 71, 72, 77, 78, 81, 86, 88, 96, 97, 98, 99, 101, 102, 103, 104, 106, 108, 115, 116, 118, 119, 120, 122, 123, 125, 126, 127, 130, 132, 134, 135, 136, 137, 140, 141, 142, 143, 144, 148, 149, 150, 152, 159, 161, 162, 164, 166, 167, 170], "grid_kwarg": [0, 136], "add": [0, 11, 12, 13, 16, 17, 18, 19, 29, 30, 32, 47, 51, 55, 58, 59, 61, 62, 67, 70, 71, 75, 81, 88, 93, 94, 98, 99, 101, 109, 118, 120, 123, 125, 126, 127, 130, 136, 141, 152, 154, 158, 162, 164, 168], "line": [0, 1, 3, 4, 16, 19, 30, 31, 32, 34, 35, 42, 44, 47, 48, 49, 50, 51, 54, 55, 57, 58, 63, 64, 66, 67, 71, 77, 81, 82, 96, 97, 99, 104, 108, 109, 110, 111, 118, 119, 120, 123, 125, 132, 136, 137, 142, 147, 148, 150, 158, 162, 164], "linewidth": [0, 82, 142], "afterax": [0, 29, 47, 55, 82, 136], "function": [0, 1, 2, 3, 5, 7, 15, 17, 18, 19, 24, 25, 27, 29, 30, 32, 34, 37, 42, 47, 48, 49, 54, 55, 57, 66, 67, 68, 72, 75, 81, 82, 83, 88, 89, 91, 92, 93, 94, 95, 97, 100, 101, 102, 103, 106, 109, 110, 115, 116, 118, 119, 120, 123, 124, 125, 126, 127, 132, 135, 136, 140, 142, 144, 145, 147, 148, 149, 150, 151, 152, 158, 162, 163, 164, 165, 167], "execut": [0, 1, 3, 14, 16, 19, 21, 29, 31, 34, 38, 39, 47, 63, 71, 82, 84, 91, 93, 99, 111, 116, 118, 140, 146, 165], "exec": [0, 1, 3, 82], "defin": [0, 1, 3, 5, 6, 7, 24, 29, 32, 34, 36, 37, 41, 42, 44, 55, 63, 64, 66, 70, 71, 75, 82, 84, 88, 91, 94, 100, 101, 103, 104, 106, 108, 109, 115, 119, 127, 132, 136, 140, 150, 152, 158, 162, 164, 165, 167, 170], "have": [0, 1, 2, 3, 4, 5, 6, 8, 9, 11, 12, 13, 14, 16, 18, 19, 20, 22, 24, 25, 26, 27, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 42, 44, 45, 47, 48, 49, 51, 52, 55, 56, 58, 59, 60, 62, 66, 67, 68, 70, 71, 72, 75, 76, 77, 81, 82, 84, 85, 86, 88, 89, 92, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 111, 113, 115, 116, 118, 119, 120, 122, 123, 124, 125, 126, 127, 129, 130, 132, 133, 135, 136, 137, 139, 140, 141, 142, 143, 148, 149, 151, 153, 154, 158, 162, 164, 165, 167], "argument": [0, 1, 2, 3, 29, 32, 37, 48, 51, 54, 55, 57, 82, 88, 89, 93, 94, 97, 101, 103, 104, 106, 109, 116, 127, 136, 140, 142, 147, 148, 149, 158, 164, 167], "current_data": [0, 3, 27, 47, 81, 82], "version": [0, 1, 4, 5, 6, 7, 8, 9, 11, 13, 15, 16, 18, 19, 22, 24, 25, 30, 32, 34, 36, 41, 42, 44, 45, 47, 48, 49, 50, 52, 55, 57, 60, 61, 63, 64, 67, 68, 70, 71, 75, 76, 78, 81, 82, 84, 85, 89, 92, 96, 97, 99, 102, 104, 105, 107, 110, 112, 115, 116, 118, 119, 120, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 138, 140, 141, 142, 144, 145, 146, 148, 149, 150, 151, 152, 156, 157, 158, 162, 164, 167, 170], "liner": [0, 32], "pylab": [0, 42, 82], "my": [0, 22, 24, 57, 77, 89, 99, 150, 162], "custom": [0, 13, 16, 22, 24, 27, 67, 71, 78, 81, 89, 95, 101, 144], "sinc": [0, 3, 4, 5, 6, 16, 19, 22, 24, 30, 34, 36, 42, 44, 45, 51, 52, 55, 57, 58, 59, 62, 63, 66, 67, 72, 75, 76, 77, 81, 82, 88, 89, 90, 97, 98, 115, 116, 118, 119, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 142, 143, 148, 149, 151, 162, 165, 166], "ha": [0, 4, 5, 6, 8, 12, 13, 14, 16, 18, 19, 20, 22, 23, 24, 25, 26, 29, 30, 31, 34, 36, 37, 38, 39, 42, 45, 47, 49, 54, 55, 56, 57, 58, 59, 63, 64, 66, 68, 70, 71, 72, 75, 77, 78, 82, 86, 89, 91, 94, 98, 101, 102, 103, 106, 107, 109, 111, 112, 113, 115, 116, 117, 118, 119, 120, 125, 126, 127, 128, 129, 130, 132, 135, 136, 137, 138, 140, 142, 143, 148, 149, 151, 154, 158, 161, 162, 164, 167, 168, 170], "been": [0, 1, 4, 5, 8, 9, 13, 14, 16, 18, 19, 20, 22, 23, 24, 26, 27, 29, 30, 31, 34, 35, 36, 37, 38, 39, 42, 45, 47, 48, 49, 52, 55, 56, 57, 58, 59, 64, 66, 68, 70, 71, 75, 78, 82, 84, 86, 89, 91, 97, 98, 102, 103, 106, 107, 108, 109, 111, 113, 115, 117, 118, 119, 120, 122, 125, 126, 127, 128, 129, 130, 132, 133, 135, 136, 137, 139, 140, 142, 148, 149, 151, 154, 162, 164, 167], "import": [0, 3, 5, 18, 19, 24, 30, 34, 36, 40, 41, 42, 47, 51, 52, 55, 57, 60, 62, 63, 67, 68, 70, 75, 78, 82, 84, 88, 89, 91, 93, 94, 96, 97, 98, 99, 100, 101, 103, 104, 105, 106, 108, 116, 118, 125, 130, 140, 141, 142, 143, 144, 148, 149, 150, 151, 152, 154, 162, 164, 166, 168], "modul": [0, 7, 8, 12, 18, 19, 27, 30, 31, 34, 36, 42, 44, 48, 49, 53, 55, 56, 57, 62, 64, 67, 70, 75, 76, 81, 82, 83, 84, 88, 89, 92, 93, 97, 101, 102, 103, 106, 110, 111, 116, 118, 120, 121, 123, 126, 127, 128, 129, 130, 137, 139, 142, 148, 149, 151, 158, 162, 163], "form": [0, 2, 3, 4, 5, 6, 8, 12, 19, 21, 22, 24, 26, 30, 31, 32, 34, 36, 38, 39, 41, 45, 46, 47, 49, 51, 55, 59, 64, 65, 68, 75, 77, 86, 89, 98, 102, 104, 108, 109, 115, 120, 127, 128, 129, 130, 139, 140, 142, 148, 149, 150, 151, 156, 162, 164, 167, 170], "better": [0, 6, 18, 19, 24, 34, 42, 47, 49, 70, 71, 72, 76, 77, 81, 104, 113, 115, 118, 124, 125, 126, 129, 130, 132, 133], "want": [0, 2, 3, 10, 12, 13, 14, 19, 21, 22, 26, 30, 31, 34, 35, 36, 37, 38, 39, 40, 42, 43, 44, 47, 51, 54, 55, 58, 59, 61, 62, 63, 66, 67, 68, 70, 76, 77, 82, 84, 88, 89, 90, 91, 97, 98, 99, 111, 114, 116, 124, 127, 130, 136, 138, 140, 141, 142, 146, 147, 150, 155, 158, 162, 164, 165], "do": [0, 1, 4, 6, 8, 11, 12, 13, 15, 18, 19, 21, 22, 27, 30, 31, 34, 35, 36, 38, 39, 40, 42, 43, 44, 47, 52, 54, 55, 56, 58, 61, 62, 66, 67, 70, 75, 76, 77, 82, 84, 88, 89, 93, 94, 96, 97, 98, 99, 100, 101, 105, 107, 108, 109, 111, 114, 115, 116, 118, 119, 123, 124, 125, 126, 127, 129, 130, 132, 135, 136, 144, 145, 147, 148, 149, 150, 151, 156, 157, 158, 160, 162, 165, 167, 168], "sever": [0, 1, 2, 5, 10, 12, 16, 19, 22, 24, 25, 26, 31, 32, 36, 37, 38, 39, 43, 47, 50, 52, 55, 59, 62, 64, 71, 72, 75, 81, 105, 115, 116, 117, 119, 120, 123, 124, 125, 126, 128, 129, 130, 132, 142, 147, 151, 160, 162, 164, 167], "thing": [0, 13, 16, 19, 24, 30, 31, 42, 52, 58, 63, 84, 93, 115, 116, 118, 126, 131, 139], "need": [0, 4, 5, 6, 12, 13, 15, 16, 18, 19, 20, 21, 22, 24, 29, 30, 31, 34, 35, 36, 37, 38, 39, 40, 42, 43, 44, 47, 49, 52, 53, 57, 58, 59, 60, 62, 63, 64, 66, 67, 70, 71, 75, 76, 77, 78, 84, 85, 88, 89, 91, 96, 97, 98, 99, 101, 104, 108, 110, 111, 113, 115, 116, 118, 120, 124, 125, 127, 128, 132, 134, 135, 136, 137, 139, 140, 142, 144, 145, 146, 148, 149, 150, 151, 152, 156, 157, 158, 159, 160, 162, 164, 166, 167, 170], "access": [0, 17, 29, 31, 59, 62, 93, 94, 96, 104, 106, 109], "data": [0, 1, 3, 5, 18, 19, 27, 29, 32, 34, 35, 36, 37, 38, 39, 41, 42, 43, 45, 47, 48, 50, 51, 57, 58, 63, 64, 65, 66, 70, 71, 73, 81, 82, 83, 84, 86, 88, 91, 94, 97, 98, 100, 102, 103, 104, 106, 109, 112, 113, 114, 115, 118, 119, 121, 122, 124, 125, 127, 128, 129, 130, 132, 136, 137, 139, 140, 142, 143, 149, 150, 152, 158, 161, 163, 168], "store": [0, 1, 13, 19, 35, 37, 43, 55, 57, 58, 71, 77, 97, 98, 101, 106, 107, 108, 116, 119, 125, 147, 149, 151, 158, 161, 162, 164], "def": [0, 1, 3, 47, 55, 70, 82, 88, 94, 98, 101, 104, 150, 152, 158], "1d": [0, 4, 7, 15, 19, 21, 24, 27, 31, 32, 37, 48, 49, 63, 67, 71, 72, 81, 82, 88, 96, 99, 100, 102, 104, 110, 112, 118, 123, 126, 128, 129, 137, 140, 141, 145, 149, 157, 164, 167], "alreadi": [0, 1, 6, 12, 13, 19, 20, 30, 31, 44, 59, 60, 62, 63, 64, 70, 84, 85, 99, 103, 105, 108, 110, 118, 120, 128, 135, 136, 137, 146, 164], "xlower": [0, 3, 16, 24, 29, 42, 49, 89, 127, 150, 152, 162, 164, 167], "xupper": [0, 24, 49, 150, 152, 164], "k": [0, 3, 4, 6, 17, 71, 92, 97, 102, 108, 142], "get": [0, 10, 13, 19, 26, 30, 43, 48, 55, 57, 58, 60, 61, 62, 66, 67, 70, 81, 85, 88, 89, 94, 97, 98, 99, 105, 107, 108, 109, 110, 113, 114, 116, 126, 140, 142, 149, 158, 164, 165], "variabl": [0, 3, 5, 13, 14, 18, 19, 24, 27, 29, 30, 32, 34, 37, 38, 39, 40, 43, 47, 48, 49, 54, 55, 58, 61, 62, 71, 74, 76, 77, 78, 82, 88, 89, 97, 99, 103, 104, 106, 107, 109, 111, 118, 123, 124, 125, 127, 129, 135, 136, 139, 140, 148, 149, 150, 152, 158, 162, 164, 165, 167], "just": [0, 6, 30, 34, 43, 58, 59, 88, 89, 91, 93, 97, 98, 99, 100, 101, 106, 109, 120, 127, 148, 167], "avail": [0, 4, 5, 10, 12, 16, 24, 25, 31, 34, 36, 42, 46, 47, 50, 52, 55, 62, 66, 70, 71, 72, 78, 81, 83, 84, 88, 91, 96, 97, 98, 100, 102, 104, 107, 108, 109, 110, 111, 115, 126, 137, 140, 141, 143, 148, 150, 153, 158, 159, 162], "var": [0, 3, 13, 29, 37, 158], "min": [0, 102, 164, 170], "max": [0, 32, 34, 42, 71, 102, 115, 120, 144, 150, 152, 164, 170], "primarili": [0, 19, 56, 77, 127, 128], "where": [0, 1, 3, 5, 6, 12, 13, 16, 18, 19, 24, 29, 32, 34, 36, 37, 38, 39, 41, 42, 43, 47, 48, 49, 52, 55, 57, 62, 63, 64, 66, 68, 70, 71, 72, 77, 78, 84, 91, 94, 95, 96, 97, 99, 102, 111, 115, 118, 119, 120, 123, 124, 125, 130, 132, 139, 141, 142, 143, 144, 147, 148, 149, 150, 151, 152, 158, 161, 162, 164, 167, 170], "horizont": [0, 55, 164], "implement": [0, 1, 4, 5, 7, 14, 16, 18, 19, 32, 42, 49, 63, 64, 67, 74, 86, 101, 102, 104, 108, 109, 116, 122, 125, 128, 130, 132, 140, 141, 148, 164, 167, 170], "claw": [0, 5, 6, 8, 11, 12, 13, 14, 15, 16, 18, 19, 21, 22, 24, 26, 30, 32, 34, 35, 36, 37, 38, 39, 40, 41, 43, 44, 46, 47, 48, 49, 51, 53, 54, 56, 58, 59, 61, 62, 63, 66, 67, 71, 74, 75, 76, 83, 88, 91, 93, 96, 97, 98, 99, 105, 107, 111, 112, 113, 114, 115, 116, 118, 119, 120, 122, 123, 126, 127, 129, 135, 136, 140, 144, 145, 150, 151, 152, 154, 155, 156, 157, 160, 161, 162, 164, 165, 167, 168], "visclaw": [0, 1, 7, 13, 24, 25, 26, 30, 36, 42, 47, 48, 50, 53, 55, 59, 60, 61, 62, 66, 70, 71, 78, 82, 83, 84, 85, 96, 100, 105, 111, 146, 147, 153], "src": [0, 5, 6, 11, 14, 15, 16, 18, 19, 21, 22, 30, 32, 34, 35, 36, 37, 42, 43, 44, 49, 51, 54, 56, 59, 62, 63, 66, 67, 71, 75, 76, 83, 100, 101, 109, 111, 112, 115, 116, 118, 120, 123, 124, 126, 127, 128, 129, 130, 132, 136, 137, 140, 144, 145, 148, 150, 152, 154, 156, 164, 165, 170], "python": [0, 3, 4, 7, 8, 11, 13, 14, 17, 21, 24, 25, 27, 29, 30, 31, 32, 35, 36, 37, 38, 39, 40, 43, 45, 47, 48, 50, 51, 54, 55, 57, 58, 59, 60, 61, 62, 63, 75, 77, 78, 81, 82, 83, 86, 87, 89, 93, 94, 96, 97, 99, 100, 101, 102, 104, 107, 108, 109, 116, 118, 120, 121, 123, 125, 126, 127, 128, 129, 132, 136, 137, 140, 141, 146, 151, 162, 164, 165, 168], "gaugetool": [0, 47, 123], "time_scal": 0, "scale": [0, 4, 32, 53, 55, 71, 78, 96, 97, 118, 119, 125, 127, 132, 151], "3600": [0, 34, 36, 77], "time_label": 0, "time_label_fonts": 0, "time_label_kwarg": [0, 136], "new_plotitem": [0, 3, 47, 55, 82, 147], "plot_typ": [0, 24, 47, 55, 82, 84, 147], "return": [0, 1, 2, 3, 32, 35, 37, 40, 51, 55, 63, 67, 70, 71, 82, 84, 91, 92, 94, 97, 98, 101, 102, 103, 104, 106, 109, 116, 126, 140, 142, 148, 150, 152, 158, 160, 164, 167, 170], "clawplotitem": [0, 1, 7, 24, 29, 81, 83, 118, 124, 127, 136, 147], "associ": [0, 1, 2, 6, 24, 55, 62, 76, 94, 97, 98, 116], "kei": [0, 1, 2, 13, 30, 32, 47, 97, 104, 108, 109, 158, 164], "provid": [0, 2, 4, 7, 10, 16, 19, 22, 29, 30, 32, 34, 36, 37, 41, 44, 48, 49, 50, 51, 52, 55, 57, 58, 63, 65, 67, 72, 75, 77, 81, 86, 89, 91, 92, 97, 98, 99, 101, 103, 104, 108, 109, 110, 113, 114, 116, 118, 124, 132, 136, 138, 140, 148, 157, 158, 161, 162, 164, 167], "one": [0, 1, 2, 3, 4, 5, 6, 8, 13, 15, 16, 18, 19, 22, 24, 26, 27, 29, 30, 31, 32, 34, 36, 37, 38, 39, 42, 47, 49, 50, 55, 57, 58, 59, 60, 61, 62, 63, 64, 68, 70, 71, 72, 74, 75, 77, 78, 81, 82, 88, 94, 97, 98, 99, 101, 103, 104, 105, 108, 109, 111, 113, 115, 116, 118, 124, 125, 127, 132, 135, 139, 140, 141, 142, 144, 145, 147, 148, 149, 150, 151, 152, 153, 156, 157, 158, 162, 164, 167, 168], "item1": [0, 84], "etc": [0, 2, 16, 21, 22, 26, 29, 30, 34, 35, 36, 52, 55, 58, 61, 63, 67, 77, 81, 89, 140, 147, 148, 151, 158, 167], "gethandl": [0, 2, 3], "handl": [0, 2, 3, 6, 34, 42, 44, 48, 57, 63, 76, 78, 81, 94, 97, 101, 103, 104, 106, 107, 108, 109, 111, 118, 119, 120, 122, 123, 125, 127, 128, 129, 130, 141, 144, 158, 164], "plot": [1, 2, 4, 7, 8, 12, 29, 31, 32, 38, 39, 40, 42, 43, 44, 45, 48, 49, 57, 59, 60, 63, 70, 77, 87, 88, 90, 91, 94, 95, 96, 98, 103, 105, 107, 108, 110, 111, 113, 118, 122, 123, 124, 125, 126, 127, 129, 130, 131, 135, 136, 142, 148, 160, 164], "outdir": [1, 3, 35, 36, 37, 38, 39, 47, 54, 66, 81, 84, 91, 93, 94, 98, 124, 150, 152, 165], "path": [1, 5, 13, 14, 32, 34, 37, 41, 42, 44, 47, 49, 51, 55, 58, 61, 62, 64, 66, 70, 74, 81, 82, 91, 96, 97, 99, 103, 109, 126, 127, 130, 136, 146, 151, 158, 164, 165], "directori": [1, 3, 5, 6, 11, 12, 13, 14, 15, 16, 19, 21, 22, 24, 25, 27, 30, 31, 33, 34, 36, 37, 38, 39, 40, 43, 45, 46, 47, 48, 51, 54, 55, 58, 59, 61, 63, 67, 71, 76, 80, 81, 84, 91, 93, 94, 96, 97, 98, 101, 108, 111, 112, 113, 115, 116, 118, 119, 124, 125, 126, 127, 129, 139, 140, 144, 145, 146, 147, 148, 149, 153, 156, 157, 160, 161, 162, 165, 167, 168], "clawpack": [1, 2, 4, 5, 6, 7, 11, 16, 18, 19, 28, 30, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 44, 45, 47, 48, 49, 50, 51, 52, 54, 55, 62, 63, 64, 65, 67, 70, 71, 73, 74, 75, 76, 77, 80, 81, 82, 83, 84, 85, 86, 87, 88, 90, 91, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 106, 107, 108, 109, 110, 111, 114, 116, 117, 119, 120, 121, 122, 123, 124, 125, 139, 140, 142, 146, 148, 149, 150, 151, 153, 155, 158, 160, 162, 164, 165, 167, 168, 170], "output": [1, 5, 7, 8, 13, 14, 16, 27, 29, 30, 31, 32, 35, 37, 38, 39, 43, 44, 47, 48, 50, 51, 53, 54, 55, 59, 64, 72, 75, 81, 82, 84, 89, 91, 92, 93, 94, 95, 96, 99, 100, 102, 103, 104, 105, 106, 108, 109, 111, 118, 119, 123, 124, 125, 126, 127, 129, 130, 131, 135, 136, 137, 140, 147, 150, 152, 158, 159, 160, 161, 164, 167, 168], "plotdir": [1, 84, 147], "hardcopi": [1, 82, 84, 147], "file": [1, 5, 6, 7, 8, 9, 11, 12, 14, 15, 18, 19, 20, 21, 22, 24, 25, 27, 29, 30, 32, 35, 37, 38, 39, 41, 43, 44, 45, 47, 48, 49, 50, 52, 54, 56, 62, 63, 64, 66, 70, 75, 77, 78, 81, 83, 86, 89, 91, 93, 94, 96, 97, 98, 99, 100, 101, 103, 106, 107, 109, 111, 112, 113, 115, 118, 119, 120, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 141, 143, 144, 145, 146, 147, 148, 149, 150, 152, 155, 156, 157, 158, 159, 161, 164, 165, 166, 168], "put": [1, 11, 16, 30, 31, 44, 58, 62, 63, 71, 88, 93, 101, 125, 146], "overwrit": [1, 91, 98, 103], "ok": [1, 39, 40, 91, 99, 109, 120, 160, 164], "old": [1, 7, 22, 24, 34, 42, 58, 59, 84, 91, 99, 100, 101, 104, 116, 124, 126, 127, 132, 135, 137, 140, 151, 162], "afterfram": [1, 29, 81], "produc": [1, 3, 24, 29, 32, 37, 38, 39, 43, 47, 48, 55, 57, 58, 63, 71, 76, 80, 81, 97, 115, 116, 132, 147, 164], "frame": [1, 2, 3, 29, 36, 37, 47, 55, 71, 77, 81, 82, 84, 88, 91, 95, 97, 99, 103, 105, 109, 125, 135, 136, 139, 147, 150, 152, 153], "done": [1, 6, 7, 8, 11, 13, 16, 21, 22, 30, 36, 38, 39, 42, 47, 50, 55, 57, 58, 60, 63, 66, 70, 71, 75, 81, 82, 84, 88, 92, 93, 96, 109, 115, 120, 124, 125, 129, 139, 140, 142, 147, 149, 151, 161, 164, 165, 166], "beforefram": [1, 29, 127], "befor": [1, 3, 4, 6, 14, 19, 30, 32, 34, 36, 37, 38, 39, 42, 43, 44, 47, 57, 58, 59, 60, 62, 63, 66, 67, 71, 76, 77, 84, 88, 91, 97, 99, 104, 106, 111, 115, 116, 118, 119, 120, 131, 135, 136, 138, 140, 143, 144, 148, 149, 162, 164, 165], "start": [1, 2, 4, 5, 6, 7, 9, 13, 14, 19, 26, 29, 30, 32, 34, 36, 38, 39, 40, 41, 42, 43, 47, 48, 49, 51, 55, 57, 58, 59, 60, 61, 62, 63, 66, 70, 74, 75, 77, 82, 84, 88, 99, 103, 104, 110, 111, 115, 116, 124, 127, 132, 138, 139, 140, 142, 144, 151, 154, 158, 160, 162, 167], "printfig": 1, "png": [1, 13, 38, 39, 42, 43, 55, 63, 70, 71, 125, 130, 142], "make": [1, 5, 11, 13, 14, 19, 21, 22, 24, 26, 27, 29, 30, 34, 36, 38, 39, 41, 43, 44, 47, 50, 52, 54, 55, 58, 59, 62, 63, 64, 66, 67, 68, 71, 76, 78, 81, 84, 85, 88, 89, 91, 94, 95, 96, 97, 101, 103, 109, 114, 116, 118, 119, 123, 124, 125, 126, 127, 129, 130, 131, 132, 133, 135, 136, 140, 142, 148, 162, 164, 166, 167], "html": [1, 12, 13, 25, 30, 32, 38, 39, 43, 46, 47, 55, 58, 59, 75, 81, 82, 93, 97, 99, 100, 110, 111, 116, 118, 128, 130, 135, 136, 158], "latex": [1, 55, 81, 100], "exist": [1, 19, 23, 32, 33, 36, 38, 39, 55, 62, 66, 70, 71, 82, 94, 98, 101, 103, 106, 109, 120, 126, 127, 144, 158, 164, 166], "print_format": [1, 55], "print_frameno": [1, 55], "list": [1, 3, 4, 7, 8, 9, 11, 13, 17, 18, 19, 20, 24, 27, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 43, 47, 49, 55, 57, 58, 60, 61, 62, 63, 65, 66, 67, 68, 71, 72, 75, 76, 77, 82, 84, 86, 88, 91, 92, 94, 97, 98, 100, 101, 102, 103, 104, 106, 107, 109, 111, 115, 118, 123, 125, 127, 132, 135, 136, 137, 139, 142, 146, 148, 149, 150, 151, 152, 158, 159, 161, 164], "int": [1, 2, 3, 32, 34, 63, 91, 92, 94, 97, 98, 103, 106, 148, 149, 151, 158, 164], "print_figno": [1, 55, 118], "iplotclaw_figno": 1, "interact": [1, 13, 24, 38, 39, 43, 47, 50, 66, 78, 81, 82, 89, 99, 100, 104, 105, 108, 111, 124, 125, 142], "mode": [1, 13, 30, 109, 161], "displai": [1, 13, 38, 39, 43, 47, 55, 63, 82, 98, 116, 151], "latex_fnam": 1, "tex": 1, "latex_titl": 1, "go": [1, 5, 13, 16, 19, 24, 27, 30, 32, 38, 39, 58, 59, 60, 62, 67, 70, 71, 77, 84, 88, 91, 93, 96, 97, 102, 117, 124, 125, 132, 139, 143, 147, 153, 158, 162, 166, 170], "result": [1, 3, 4, 7, 9, 12, 17, 18, 19, 27, 28, 31, 32, 34, 35, 36, 38, 39, 40, 45, 46, 47, 48, 51, 52, 57, 58, 59, 62, 63, 66, 68, 71, 72, 75, 77, 81, 82, 83, 84, 87, 91, 93, 96, 98, 102, 105, 109, 115, 116, 118, 119, 123, 125, 126, 127, 128, 130, 132, 135, 136, 144, 148, 149, 150, 152, 160, 162, 164, 166], "latex_framesperpag": 1, "how": [1, 6, 7, 12, 16, 24, 26, 30, 31, 32, 34, 36, 38, 39, 41, 42, 44, 47, 50, 55, 59, 63, 64, 66, 70, 75, 76, 77, 81, 91, 93, 95, 96, 97, 101, 104, 108, 109, 111, 113, 114, 115, 116, 120, 125, 127, 129, 130, 135, 138, 139, 140, 147, 148, 151, 153, 162, 164, 168], "mani": [1, 3, 4, 6, 12, 13, 18, 19, 22, 23, 24, 30, 36, 38, 39, 40, 44, 45, 46, 49, 50, 55, 56, 58, 63, 64, 66, 67, 70, 75, 76, 77, 82, 84, 85, 86, 88, 93, 96, 101, 103, 108, 109, 115, 117, 118, 119, 125, 127, 128, 129, 130, 134, 137, 140, 142, 147, 148, 149, 151, 162, 167], "try": [1, 30, 31, 38, 39, 40, 47, 55, 57, 62, 63, 70, 82, 90, 93, 96, 97, 103, 105, 107, 108, 109, 111, 116, 148, 160, 164, 165], "page": [1, 4, 9, 11, 13, 15, 17, 19, 20, 24, 26, 30, 52, 57, 59, 60, 61, 62, 93, 96, 99, 100, 107, 110, 112, 116, 118, 126, 130, 135, 136, 137, 143, 145, 147, 153, 156, 157, 166, 167], "latex_framesperlin": 1, "latex_figsperlin": 1, "recal": [1, 12, 42, 149], "latex_pdf": 1, "run": [1, 5, 6, 7, 12, 13, 14, 16, 19, 22, 24, 26, 27, 30, 34, 35, 36, 37, 42, 43, 45, 46, 47, 48, 54, 55, 56, 58, 59, 60, 61, 62, 63, 64, 66, 68, 71, 77, 78, 81, 82, 84, 85, 87, 89, 91, 94, 95, 96, 98, 101, 105, 107, 108, 109, 111, 113, 115, 118, 119, 120, 124, 125, 126, 127, 128, 129, 131, 132, 134, 139, 140, 150, 151, 152, 158, 160, 161, 164, 167], "pdflatex": 1, "pdf": [1, 32], "index": [1, 6, 13, 24, 25, 29, 35, 37, 47, 58, 59, 82, 94, 96, 99, 101, 102, 109, 118, 127, 132, 136, 148, 149, 150, 151, 152], "call": [1, 6, 9, 22, 24, 29, 32, 36, 37, 41, 44, 47, 54, 55, 67, 70, 71, 75, 77, 82, 84, 88, 89, 91, 92, 97, 98, 101, 103, 104, 106, 108, 109, 115, 116, 118, 119, 123, 124, 126, 127, 136, 140, 142, 144, 146, 148, 150, 151, 152, 158, 164, 167], "_plotindex": [1, 47, 118], "These": [1, 4, 5, 12, 16, 18, 19, 20, 25, 30, 31, 32, 34, 36, 41, 45, 47, 52, 55, 58, 63, 64, 67, 70, 71, 78, 82, 84, 88, 93, 96, 97, 98, 100, 106, 108, 112, 114, 115, 116, 118, 119, 125, 126, 127, 128, 132, 135, 136, 137, 139, 149, 153, 158, 159, 162, 166, 170], "new_plotfigur": [1, 2, 47, 55, 82, 147], "figno": [1, 2, 47, 55, 82, 84, 118, 147], "getfram": [1, 3, 84], "frameno": [1, 3, 29, 37], "clawsolut": 1, "solut": [1, 3, 4, 5, 16, 18, 19, 24, 27, 29, 31, 36, 37, 39, 47, 49, 51, 64, 71, 75, 77, 81, 84, 89, 91, 94, 96, 97, 98, 101, 102, 104, 106, 107, 108, 115, 116, 123, 124, 128, 135, 139, 140, 147, 148, 149, 150, 152, 160, 167, 170], "read": [1, 4, 5, 7, 19, 30, 32, 34, 35, 37, 38, 39, 47, 48, 49, 52, 53, 57, 62, 63, 64, 67, 70, 71, 75, 77, 81, 89, 91, 97, 98, 103, 109, 124, 125, 127, 128, 133, 135, 136, 150, 151, 152, 158, 162, 164, 167, 168], "fort": [1, 8, 29, 34, 36, 47, 71, 81, 97, 103, 120, 124, 125, 126, 135, 139, 148, 149, 150, 152, 161, 168], "q000n": [1, 8], "n": [1, 6, 16, 17, 19, 32, 34, 47, 51, 68, 84, 99, 105, 116, 118, 127, 142, 148, 151, 167, 170], "find": [1, 3, 4, 6, 12, 19, 26, 29, 30, 31, 32, 51, 55, 62, 66, 75, 78, 81, 86, 93, 101, 106, 107, 109, 111, 113, 127, 158, 165], "onc": [1, 5, 13, 24, 30, 31, 38, 39, 55, 59, 60, 61, 62, 70, 71, 75, 77, 84, 88, 98, 99, 100, 101, 106, 109, 125, 127, 133], "framesoln_dict": 1, "It": [1, 4, 6, 12, 19, 22, 24, 30, 31, 34, 36, 47, 49, 52, 53, 55, 57, 58, 63, 67, 75, 81, 82, 88, 91, 94, 97, 98, 99, 104, 108, 111, 115, 116, 120, 125, 135, 139, 142, 143, 144, 148, 149, 151, 162, 164, 165, 166, 167], "q": [1, 3, 5, 6, 16, 19, 22, 24, 29, 36, 37, 47, 71, 77, 81, 84, 88, 89, 94, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 108, 115, 120, 123, 125, 141, 148, 149, 150, 152, 162, 167, 168, 170], "onli": [1, 3, 5, 6, 8, 12, 13, 16, 18, 19, 21, 24, 29, 30, 32, 34, 36, 37, 41, 42, 45, 46, 47, 49, 52, 55, 58, 59, 60, 62, 63, 64, 67, 68, 71, 72, 75, 76, 77, 78, 82, 88, 91, 94, 97, 98, 99, 101, 103, 104, 105, 106, 108, 109, 110, 113, 115, 118, 119, 124, 125, 126, 127, 130, 132, 135, 139, 140, 141, 142, 143, 144, 146, 147, 148, 149, 150, 151, 152, 154, 158, 162, 164, 165, 166, 167, 170], "separ": [1, 30, 34, 36, 46, 55, 58, 63, 67, 72, 96, 104, 109, 142, 164], "clearfram": [1, 84], "remov": [1, 3, 22, 31, 36, 43, 56, 58, 62, 63, 66, 84, 99, 111, 118, 119, 122, 123, 135, 137, 144, 151, 164, 165], "more": [1, 2, 3, 4, 5, 7, 10, 12, 13, 14, 16, 17, 18, 19, 22, 24, 26, 28, 30, 31, 32, 34, 36, 38, 41, 47, 48, 49, 50, 52, 55, 57, 58, 59, 61, 62, 63, 64, 65, 66, 70, 71, 72, 75, 81, 82, 83, 84, 85, 86, 89, 91, 92, 94, 96, 97, 98, 99, 100, 101, 102, 104, 105, 106, 108, 109, 111, 114, 115, 116, 118, 119, 120, 123, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 140, 142, 143, 144, 146, 147, 148, 149, 150, 151, 153, 154, 158, 160, 161, 162, 164, 165, 166, 167, 170], "yet": [1, 13, 18, 22, 27, 52, 56, 58, 61, 63, 81, 104, 118, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 140, 148, 150, 169], "clearfigur": 1, "clear": [1, 2, 6, 71, 84, 135], "paramet": [1, 6, 7, 9, 16, 18, 19, 22, 27, 29, 32, 34, 35, 36, 38, 39, 42, 43, 45, 48, 49, 50, 52, 55, 57, 66, 67, 68, 71, 75, 76, 77, 81, 87, 88, 91, 92, 97, 98, 100, 102, 103, 106, 109, 112, 115, 119, 125, 130, 132, 135, 137, 139, 140, 141, 143, 144, 150, 152, 154, 159, 162, 164, 165, 167], "first": [1, 3, 5, 13, 14, 19, 21, 22, 24, 30, 32, 34, 36, 37, 38, 39, 40, 41, 42, 55, 58, 59, 62, 63, 66, 70, 71, 82, 84, 88, 89, 94, 97, 98, 99, 101, 104, 105, 106, 108, 109, 111, 113, 115, 119, 123, 128, 136, 140, 141, 142, 144, 148, 150, 151, 158, 160, 162, 164, 170], "sure": [1, 19, 22, 30, 43, 58, 59, 60, 61, 62, 71, 78, 88, 97, 99, 101, 103, 107, 109, 143, 164, 165, 166], "previou": [1, 30, 31, 47, 57, 59, 61, 62, 67, 70, 71, 84, 88, 104, 113, 119, 124, 125, 126, 127, 132, 139, 144, 148, 149, 150, 152, 162, 164], "chang": [1, 6, 8, 13, 15, 16, 18, 19, 21, 22, 27, 30, 31, 32, 34, 36, 43, 44, 49, 54, 55, 56, 57, 58, 59, 62, 63, 66, 67, 68, 70, 71, 76, 77, 78, 81, 84, 88, 89, 95, 97, 98, 106, 109, 110, 113, 114, 115, 116, 138, 140, 144, 145, 148, 149, 150, 151, 152, 154, 156, 157, 162, 165, 167], "re": [1, 17, 30, 43, 47, 66, 71, 78, 82, 84, 88, 105, 115, 116, 129, 165], "session": [1, 38, 39, 40, 100, 105], "iplotclaw": [1, 13, 24, 38, 39, 47, 50, 81, 82, 100, 111], "being": [1, 3, 4, 8, 13, 18, 19, 34, 42, 47, 49, 52, 57, 62, 70, 72, 84, 91, 97, 102, 103, 104, 109, 111, 113, 115, 118, 124, 126, 128, 137, 140, 142, 144, 148, 151, 165, 167], "getfigur": 1, "fignam": [1, 84], "getax": 1, "axesnam": [1, 84], "clawplotax": [1, 2, 3, 29, 82, 127, 132, 136, 147], "search": [1, 13, 14, 17, 62, 81, 96, 109, 111, 125, 127, 142, 146], "over": [1, 3, 5, 6, 13, 16, 17, 24, 30, 32, 34, 36, 41, 42, 47, 48, 49, 50, 52, 55, 57, 63, 64, 70, 71, 72, 75, 81, 97, 98, 104, 115, 118, 119, 120, 128, 130, 140, 142, 144, 147, 149, 150, 151, 161, 162, 167, 170], "found": [1, 4, 5, 6, 11, 12, 13, 16, 19, 24, 26, 29, 31, 34, 37, 38, 39, 43, 45, 47, 49, 51, 52, 54, 58, 63, 66, 67, 72, 80, 82, 83, 84, 88, 92, 99, 103, 107, 109, 111, 113, 116, 124, 127, 139, 143, 147, 154, 158, 164, 165], "uniqu": [1, 77, 118, 124, 158], "getitem": 1, "itemnam": [1, 84], "showitem": 1, "plotfram": 1, "number": [1, 2, 3, 4, 6, 8, 12, 16, 17, 19, 21, 24, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 46, 47, 49, 55, 58, 63, 66, 71, 76, 77, 78, 84, 88, 89, 91, 92, 93, 94, 96, 97, 98, 99, 101, 103, 104, 106, 108, 109, 110, 113, 115, 116, 118, 119, 120, 122, 123, 124, 125, 126, 127, 129, 136, 139, 140, 142, 148, 149, 150, 151, 152, 158, 159, 160, 164, 167], "conveni": [1, 29, 34, 36, 38, 39, 42, 47, 55, 84, 91, 93, 96, 98, 100, 108, 167, 170], "pyclaw": [1, 3, 4, 12, 17, 25, 26, 29, 30, 31, 46, 47, 59, 60, 61, 77, 78, 84, 85, 95, 99, 101, 107, 111, 138, 140, 141, 146], "plotter": [1, 3, 29, 84], "frametool": [1, 29, 84, 118, 130], "printfram": [1, 81], "still": [1, 5, 7, 8, 13, 16, 18, 19, 24, 26, 28, 34, 42, 45, 47, 49, 55, 56, 67, 70, 71, 77, 81, 86, 97, 104, 110, 115, 116, 118, 123, 124, 125, 126, 127, 128, 130, 135, 137, 139, 140, 151, 158], "clawplotdata": [2, 3, 29, 47, 55, 82, 84, 91, 147], "next": [2, 3, 6, 13, 20, 36, 38, 40, 47, 58, 71, 77, 82, 84, 87, 88, 96, 97, 99, 104, 108, 113, 115, 116, 118, 135, 136, 137, 148, 149, 151], "unus": [2, 97], "1001": 2, "figsiz": [2, 42, 70, 82, 136, 142, 147], "tupl": [2, 3, 32, 51, 63, 75, 82, 94, 97, 98, 164], "size": [2, 22, 32, 36, 37, 42, 47, 55, 63, 76, 77, 81, 94, 97, 99, 104, 125, 130, 135, 149, 150, 152, 154, 162, 164], "facecolor": [2, 82, 118, 136, 147], "background": [2, 81, 127, 147], "behind": [2, 42, 70, 144, 151], "By": [2, 15, 32, 44, 49, 51, 55, 57, 63, 75, 82, 84, 88, 94, 98, 100, 107, 127, 142, 145, 156, 157, 164, 170], "theme": 2, "tan": [2, 82], "public": [2, 4, 13, 17, 23, 138], "probabl": [2, 13, 30, 55, 68, 70, 110, 111], "w": [2, 17, 51, 140, 170], "white": [2, 63, 118], "keyword": [2, 3, 82, 88, 93, 94, 97, 103, 109, 116, 127, 147, 158, 164], "12": [2, 34, 42, 55, 70, 82, 142, 147], "5": [2, 4, 5, 8, 9, 11, 13, 18, 19, 21, 27, 32, 34, 35, 36, 37, 41, 42, 45, 47, 49, 51, 55, 56, 57, 58, 59, 63, 64, 66, 67, 68, 70, 75, 82, 92, 94, 98, 99, 101, 102, 104, 110, 111, 115, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 148, 149, 150, 151, 152, 158, 161, 162, 164, 169], "would": [2, 3, 12, 13, 16, 26, 29, 30, 34, 36, 41, 44, 55, 57, 59, 62, 64, 66, 67, 70, 72, 75, 77, 82, 86, 88, 91, 94, 98, 109, 116, 125, 142, 143, 144, 147, 148, 151, 158, 162, 167], "inch": [2, 55, 63, 82, 147], "red": [2, 3, 30, 47, 63, 82, 116, 147], "option": [2, 12, 13, 16, 19, 22, 24, 27, 30, 31, 32, 34, 36, 37, 38, 39, 43, 44, 51, 54, 57, 60, 62, 66, 71, 77, 81, 82, 88, 89, 91, 93, 94, 95, 97, 98, 100, 103, 104, 105, 108, 109, 111, 112, 115, 116, 118, 120, 123, 124, 125, 128, 130, 133, 135, 137, 142, 146, 147, 148, 150, 151, 152, 153, 158, 164], "clf_each_fram": 2, "clf": 2, "axes1": [2, 84], "shown": [3, 13, 18, 19, 58, 63, 67, 68, 71, 78, 98, 118, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 142, 164, 167], "fragment": 3, "typic": [3, 22, 42, 66, 67, 71, 72, 75, 77, 78, 84, 89, 99, 101, 104, 106, 115, 149, 150, 161, 162, 165, 166, 167, 170], "assum": [3, 5, 22, 24, 32, 34, 36, 37, 39, 42, 49, 51, 52, 55, 57, 58, 59, 63, 71, 75, 81, 97, 98, 100, 101, 102, 108, 109, 115, 123, 136, 142, 143, 148, 151, 158, 159, 162, 164, 166, 170], "instanc": [3, 30, 37, 55, 75, 78, 84, 88, 89, 91, 94, 97, 98, 101, 142, 151], "type": [3, 4, 7, 13, 17, 18, 22, 30, 32, 38, 39, 43, 47, 48, 55, 66, 71, 82, 83, 84, 88, 89, 90, 92, 94, 97, 99, 100, 104, 105, 108, 109, 142, 149, 150, 151, 158, 159, 162, 164, 170], "dimension": [3, 7, 8, 17, 19, 24, 27, 32, 34, 36, 38, 39, 47, 49, 52, 56, 71, 94, 101, 123, 124, 126, 129, 150, 151, 152, 164, 167], "point": [3, 5, 6, 13, 15, 16, 17, 22, 30, 32, 35, 36, 38, 39, 41, 42, 44, 47, 48, 49, 50, 51, 52, 55, 57, 58, 59, 61, 62, 63, 64, 71, 72, 75, 88, 98, 99, 103, 109, 110, 111, 115, 118, 126, 128, 130, 136, 139, 140, 142, 143, 144, 145, 146, 148, 149, 150, 151, 156, 157, 158, 162, 164, 165, 167], "slice": [3, 49, 71, 140], "scatter": [3, 24, 71], "radial": [3, 18, 34, 49, 51, 151, 167], "symmetr": [3, 49, 51, 167], "between": [3, 4, 5, 6, 13, 16, 25, 27, 30, 32, 33, 34, 36, 37, 41, 51, 55, 59, 63, 70, 71, 72, 75, 76, 78, 81, 91, 94, 98, 104, 106, 107, 109, 110, 111, 115, 118, 124, 125, 140, 142, 143, 148, 149, 150, 151, 152, 153, 154, 161, 162, 164, 166, 167], "plot_var": [3, 29, 47, 55, 82, 83], "fill_var2": 3, "diment": 3, "raster": [3, 55, 57, 135, 162], "contour": [3, 32, 47, 55, 57, 71, 110, 147, 164], "pcolor": [3, 47, 81, 110, 118, 135, 164], "2d_schlieren": 3, "schlieren": [3, 71], "2d_patch": [3, 24], "cell": [3, 4, 5, 7, 8, 15, 16, 18, 19, 22, 24, 27, 29, 34, 35, 36, 37, 47, 48, 49, 55, 57, 63, 70, 71, 72, 76, 77, 78, 88, 94, 97, 99, 102, 104, 106, 108, 115, 119, 120, 124, 125, 126, 127, 128, 129, 130, 132, 136, 140, 143, 144, 145, 148, 149, 150, 152, 154, 159, 161, 162, 167, 170], "patch": [3, 6, 7, 16, 19, 24, 29, 34, 42, 55, 71, 75, 76, 77, 81, 82, 97, 99, 103, 106, 115, 125, 127, 130, 132, 144, 147, 149, 161, 162, 167], "edg": [3, 6, 15, 16, 19, 29, 32, 34, 35, 36, 37, 41, 49, 63, 75, 94, 102, 140, 142, 145, 149, 150, 152, 167], "hillshad": [3, 118], "come": [3, 30, 82, 84, 93, 99, 104, 123, 162, 167], "parent": [3, 29, 94, 106, 109], "integ": [3, 34, 35, 36, 47, 55, 63, 68, 70, 82, 89, 97, 103, 115, 118, 126, 129, 140, 148, 151, 158, 164], "compon": [3, 16, 19, 22, 24, 27, 39, 47, 61, 62, 71, 77, 81, 101, 103, 105, 106, 115, 123, 132, 141, 148, 149, 150, 162, 167], "correspond": [3, 6, 12, 25, 27, 29, 32, 35, 36, 37, 47, 49, 51, 52, 57, 58, 59, 63, 71, 75, 82, 88, 92, 94, 97, 98, 101, 103, 106, 115, 116, 140, 142, 143, 148, 149, 150, 151, 152, 158, 162, 166, 167], "appli": [3, 4, 5, 6, 13, 16, 17, 19, 27, 32, 52, 55, 57, 68, 70, 75, 82, 84, 92, 94, 97, 104, 115, 139, 148, 151, 167], "comput": [3, 4, 5, 6, 13, 16, 17, 18, 19, 29, 31, 32, 34, 35, 36, 37, 42, 47, 49, 51, 55, 57, 62, 63, 64, 66, 72, 75, 81, 82, 84, 89, 91, 94, 96, 97, 98, 99, 104, 108, 111, 113, 115, 118, 119, 120, 124, 125, 129, 132, 135, 137, 140, 144, 148, 150, 151, 152, 159, 162, 167, 170], "signatur": [3, 89, 92, 94, 95, 97, 102, 158], "hold": [3, 37, 84, 108, 115], "current": [3, 5, 13, 14, 19, 22, 24, 26, 29, 30, 31, 32, 34, 37, 41, 42, 44, 47, 48, 49, 52, 57, 58, 59, 61, 62, 63, 64, 71, 73, 77, 82, 84, 94, 97, 98, 99, 104, 106, 109, 111, 115, 116, 118, 124, 126, 127, 137, 139, 143, 147, 148, 149, 150, 151, 152, 154, 158, 159, 162, 164, 166], "afteritem": [3, 29], "afterpatch": [3, 29], "There": [3, 6, 13, 24, 36, 39, 43, 55, 58, 59, 66, 70, 75, 77, 84, 85, 98, 105, 113, 126, 127, 147, 148, 154, 159, 160, 167, 169], "calcul": [3, 5, 6, 18, 19, 29, 32, 35, 37, 48, 51, 71, 75, 82, 94, 102, 104, 118, 120, 125, 164], "cd": [3, 13, 30, 38, 39, 40, 56, 58, 59, 61, 62, 84, 93, 96, 99, 105, 116, 160], "On": [3, 5, 13, 55, 76, 85, 126, 136, 142, 146, 167], "ylower": [3, 24, 29, 42, 89, 127, 150, 162, 164], "patchno": [3, 29], "out": [3, 16, 17, 26, 28, 31, 32, 34, 36, 37, 38, 39, 42, 47, 48, 49, 54, 56, 57, 58, 59, 62, 63, 64, 65, 66, 71, 75, 82, 85, 86, 88, 89, 91, 97, 98, 99, 100, 103, 108, 110, 111, 113, 116, 125, 127, 129, 130, 140, 142, 149, 150, 152, 158, 164, 165], "lower": [3, 24, 32, 34, 35, 41, 49, 57, 70, 77, 94, 99, 142, 144, 148, 150, 152, 162, 164, 166], "left": [3, 5, 10, 13, 16, 20, 27, 29, 32, 34, 57, 77, 84, 94, 101, 102, 108, 118, 126, 132, 135, 136, 137, 138, 139, 140, 143, 149, 162, 164, 166, 170], "mappedgrid": [3, 71], "map": [3, 16, 18, 31, 32, 42, 48, 63, 70, 71, 82, 86, 89, 94, 96, 101, 115, 123, 127, 132, 141, 164, 170], "mapc2p": [3, 27, 29, 49, 71, 89, 94, 132], "underli": [3, 55, 125], "requir": [3, 4, 16, 18, 19, 22, 24, 27, 29, 30, 32, 34, 36, 37, 38, 39, 43, 48, 49, 51, 52, 59, 62, 70, 71, 75, 78, 81, 84, 85, 88, 89, 94, 97, 100, 101, 104, 105, 106, 108, 109, 110, 115, 116, 118, 119, 120, 123, 125, 128, 130, 132, 135, 137, 140, 141, 142, 147, 148, 149, 150, 151, 152, 158, 159, 162, 165, 168, 170], "depend": [3, 13, 16, 30, 31, 32, 34, 37, 38, 39, 43, 44, 50, 52, 55, 66, 68, 71, 75, 82, 87, 97, 102, 103, 104, 109, 111, 115, 127, 144, 149, 151, 164, 165, 167, 170], "summar": [3, 30, 33, 115, 117, 167], "plotstyl": [3, 47, 82, 147], "anyth": [3, 6, 30, 31, 62, 67, 116, 127], "valid": [3, 52, 75, 91, 98, 103, 106, 125, 151, 158, 159, 164], "fmt": 3, "group": [3, 13, 26, 30, 32, 52, 93, 97, 99, 107, 124, 140], "solid": [3, 16, 55, 75, 101, 147, 148, 150, 152], "dash": [3, 99], "o": [3, 5, 17, 41, 42, 43, 70, 72, 82, 85, 86, 89, 97, 98, 107, 127, 150, 164, 167], "circl": [3, 51, 82, 118], "bo": 3, "blue": [3, 11, 42, 47, 63, 70, 82, 142, 164], "though": [3, 42, 78, 158, 162], "also": [3, 4, 5, 6, 7, 8, 9, 11, 12, 16, 17, 18, 19, 20, 22, 24, 25, 26, 27, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 44, 45, 46, 47, 48, 49, 51, 52, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 66, 67, 70, 71, 75, 76, 77, 78, 81, 82, 84, 88, 90, 91, 94, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 118, 119, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 146, 148, 149, 150, 151, 152, 153, 156, 157, 158, 159, 160, 161, 162, 164, 165, 166, 167, 169, 170], "overrul": 3, "r": [3, 4, 6, 17, 30, 47, 51, 56, 58, 70, 71, 74, 82, 88, 92, 99, 101, 118, 140, 142, 147, 164, 170], "ff0000": [3, 63], "No": [3, 43, 55, 59, 71, 94, 104, 133, 140, 148, 151, 165], "extra": [3, 55, 141], "give": [3, 6, 9, 10, 13, 16, 17, 18, 19, 26, 30, 32, 34, 35, 36, 38, 39, 47, 49, 56, 63, 64, 70, 72, 75, 76, 77, 82, 84, 99, 100, 104, 116, 120, 124, 125, 129, 132, 142, 148, 151, 162, 164, 166], "polygon": [3, 7, 41, 55, 63, 130, 164], "curv": [3, 47, 81, 142], "fill_between": 3, "plot_var2": 3, "zero": [3, 16, 32, 34, 42, 44, 47, 63, 71, 72, 88, 101, 102, 106, 108, 132, 142, 143], "fill_wher": 3, "plotitem": [3, 29, 47, 82, 147], "mean": [3, 13, 24, 30, 34, 42, 47, 52, 56, 62, 71, 72, 98, 99, 115, 118, 140, 143, 148, 150, 152, 166], "map_2d_to_1d": 3, "In": [3, 5, 6, 8, 11, 12, 15, 16, 18, 19, 21, 22, 24, 29, 32, 34, 36, 41, 44, 47, 48, 49, 52, 55, 56, 57, 58, 59, 62, 63, 64, 66, 67, 70, 71, 72, 74, 75, 77, 78, 82, 83, 84, 88, 89, 94, 96, 97, 98, 99, 100, 101, 102, 104, 106, 109, 111, 112, 113, 115, 118, 119, 120, 123, 124, 125, 127, 128, 132, 136, 139, 140, 142, 144, 145, 146, 148, 149, 151, 156, 157, 162, 164, 165, 167, 170], "about": [3, 5, 7, 13, 14, 16, 18, 19, 24, 27, 35, 36, 37, 38, 39, 43, 49, 51, 52, 57, 59, 63, 66, 68, 71, 77, 83, 85, 88, 96, 97, 99, 104, 111, 116, 124, 128, 130, 135, 136, 140, 147, 149, 150, 151, 162, 165, 167, 170], "j": [3, 4, 5, 15, 17, 22, 24, 29, 35, 42, 56, 63, 70, 71, 77, 84, 96, 97, 115, 119, 120, 144, 145], "v": [3, 16, 27, 31, 32, 34, 36, 37, 51, 64, 67, 116, 124, 149, 162], "radiu": [3, 151, 158, 159, 164], "q0_vs_radiu": 3, "convert": [3, 24, 27, 32, 35, 37, 45, 51, 55, 62, 63, 66, 75, 78, 89, 96, 101, 109, 110, 127, 130, 136, 137, 148, 149, 158, 162, 166], "numpi": [3, 13, 32, 34, 36, 37, 42, 51, 70, 85, 87, 88, 89, 91, 94, 101, 106, 107, 108, 110, 116, 137, 141, 142, 150, 164, 165], "sqrt": [3, 34, 37, 49, 68, 88, 101, 102, 108, 150], "q0": [3, 101], "work": [3, 5, 8, 13, 16, 19, 21, 22, 24, 26, 27, 28, 30, 31, 34, 36, 38, 39, 43, 48, 52, 55, 56, 57, 58, 59, 60, 61, 62, 63, 70, 71, 74, 75, 76, 82, 85, 86, 87, 88, 90, 91, 92, 96, 97, 98, 99, 102, 104, 105, 110, 111, 113, 114, 115, 116, 118, 121, 122, 123, 124, 125, 126, 127, 130, 132, 133, 138, 140, 146, 147, 148, 149, 153, 159, 162, 165, 169], "symbol": [3, 71, 111], "best": [3, 4, 16, 24, 28, 30, 36, 44, 49, 55, 57, 59, 60, 66, 72, 74, 76, 81, 82, 97, 101, 113, 114, 115, 116, 127, 138, 140, 151, 155, 158, 162, 167], "descript": [3, 4, 6, 9, 24, 25, 27, 32, 36, 37, 63, 71, 75, 78, 81, 96, 97, 109, 113, 115, 137, 140, 141, 151, 158, 162, 170], "celledges_show": [3, 24], "draw": 3, "amr_celledges_show": 3, "level": [3, 6, 7, 16, 19, 25, 29, 31, 34, 36, 41, 42, 47, 48, 50, 51, 52, 55, 58, 59, 61, 62, 71, 72, 76, 77, 89, 91, 94, 96, 97, 98, 104, 111, 112, 115, 116, 119, 120, 124, 125, 127, 130, 139, 142, 143, 146, 148, 149, 150, 152, 161, 162, 164, 166, 167], "patchedges_show": [3, 24], "mostli": [3, 81, 96, 130, 137], "contour_level": [3, 164], "three": [3, 13, 17, 24, 32, 34, 37, 52, 55, 67, 71, 75, 99, 103, 109, 116, 142, 148, 151, 162, 164, 167], "contour_nlevel": 3, "contour_min": 3, "minimum": [3, 19, 34, 47, 55, 75, 108, 125, 151, 164], "contour_max": 3, "maximum": [3, 24, 32, 34, 35, 36, 48, 71, 72, 104, 108, 115, 119, 120, 127, 130, 148, 149, 150, 152, 158, 159], "contour_color": 3, "specif": [3, 5, 12, 19, 24, 30, 32, 47, 48, 49, 51, 55, 56, 62, 65, 67, 68, 77, 86, 87, 89, 91, 96, 97, 98, 102, 103, 109, 113, 125, 126, 127, 130, 147, 148, 149, 150, 152, 159, 162], "b": [3, 5, 17, 30, 32, 34, 35, 36, 37, 42, 47, 49, 56, 58, 59, 68, 72, 82, 104, 115, 123, 130, 142, 143, 144, 151, 164, 166], "0000ff": [3, 63], "colormap": [3, 32, 42, 50, 55, 70, 71, 81, 83, 124, 130, 164], "amr_contour_color": 3, "As": [3, 18, 19, 39, 42, 48, 49, 52, 58, 59, 63, 64, 88, 108, 110, 114, 118, 119, 130, 140, 141, 144, 151, 154, 160, 167], "black": [3, 47], "subsequ": [3, 10, 71], "both": [3, 16, 18, 19, 30, 32, 35, 36, 37, 38, 39, 41, 42, 47, 52, 57, 60, 62, 67, 70, 71, 75, 77, 89, 97, 98, 99, 104, 105, 115, 116, 123, 124, 127, 130, 135, 140, 141, 142, 144, 148, 149, 150, 152, 156, 162, 167], "fine": [3, 19, 34, 35, 36, 42, 49, 58, 74, 78, 96, 101, 115, 118, 125, 132, 142, 144, 148, 149, 151, 162, 167], "coars": [3, 34, 36, 55, 115, 118, 125, 132, 148, 162, 167], "anoth": [3, 19, 24, 34, 36, 42, 47, 51, 55, 62, 63, 77, 81, 85, 93, 104, 107, 116, 127, 158, 167], "refin": [3, 4, 5, 7, 8, 17, 19, 24, 36, 48, 49, 52, 55, 56, 57, 70, 71, 77, 78, 88, 125, 127, 128, 130, 132, 142, 144, 147, 148, 149, 150, 161, 162, 167], "region": [3, 6, 7, 13, 16, 19, 24, 34, 36, 41, 42, 48, 52, 53, 55, 63, 68, 72, 75, 78, 113, 118, 127, 130, 132, 143, 144, 149, 150, 154, 162, 164], "lack": 3, "hidden": [3, 66, 82], "blank": [3, 35, 63, 158], "coarser": [3, 16, 19, 57, 125, 144, 148, 149, 167], "easili": [3, 13, 30, 34, 55, 58, 71, 82, 89, 94, 105, 109, 116, 118, 130, 153], "contour_show": 3, "commonli": [3, 19, 71, 82, 84], "amr_contour_show": 3, "determin": [3, 5, 6, 32, 34, 37, 42, 47, 48, 49, 52, 54, 55, 58, 63, 72, 75, 82, 92, 94, 97, 102, 106, 111, 115, 120, 124, 125, 139, 142, 143, 147, 148, 149, 151, 164, 167], "whether": [3, 6, 13, 16, 24, 51, 57, 60, 62, 64, 65, 66, 71, 86, 94, 97, 98, 102, 103, 104, 115, 116, 125, 140, 142, 148, 149, 151, 164], "view": [3, 4, 24, 36, 38, 39, 47, 48, 49, 51, 55, 57, 58, 63, 77, 81, 83, 84, 88, 99, 105, 110, 123, 127, 153, 155], "finest": [3, 19, 34, 36, 42, 47, 72, 127, 161, 164], "contour_kwarg": [3, 164], "pcolor_cmap": [3, 55], "pcolor_cmin": 3, "pcolor_cmax": 3, "thei": [3, 5, 6, 13, 16, 18, 19, 26, 29, 30, 32, 34, 36, 41, 42, 45, 47, 49, 52, 55, 58, 59, 62, 63, 64, 67, 70, 71, 77, 81, 94, 96, 101, 104, 109, 115, 116, 125, 132, 144, 147, 151, 154, 158, 162, 164, 167], "chosen": [3, 31, 34, 41, 42, 49, 55, 57, 70, 108, 115, 132, 143, 149], "vari": [3, 15, 17, 27, 32, 42, 48, 49, 57, 68, 72, 101, 103, 123, 130, 140, 141, 143, 145, 149, 151, 170], "yield": [3, 18, 19], "veri": [3, 5, 16, 17, 18, 19, 24, 49, 52, 55, 59, 60, 63, 75, 82, 86, 89, 97, 98, 99, 100, 101, 104, 116, 118, 120, 124, 135, 142, 144, 148, 159, 162], "confus": [3, 57, 62, 111, 132, 140], "add_colorbar": [3, 32, 164], "ad": [3, 12, 16, 22, 24, 26, 27, 29, 31, 34, 36, 37, 44, 47, 51, 57, 58, 59, 62, 63, 64, 68, 71, 72, 75, 82, 87, 89, 92, 94, 95, 98, 99, 111, 112, 113, 115, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 133, 135, 136, 137, 139, 144, 148, 149, 151, 154, 158, 161, 164, 168], "imshow_cmap": 3, "imshow_cmin": 3, "imshow_cmax": 3, "hillshade_vertical_exagger": 3, "vertic": [3, 32, 41, 52, 55, 63, 70, 142, 143, 151, 164, 166], "exagger": 3, "calul": 3, "hillshade_azimuth_degre": 3, "light": [3, 55, 71, 115], "sourc": [3, 4, 17, 18, 19, 25, 27, 30, 32, 44, 48, 49, 55, 56, 58, 59, 61, 62, 63, 65, 67, 68, 81, 86, 89, 93, 94, 95, 104, 105, 107, 108, 109, 113, 114, 116, 118, 125, 126, 127, 136, 137, 141, 143, 148, 150, 151, 152, 155, 156, 157, 158, 162], "azimuth": 3, "angl": [3, 16, 32, 51, 75], "315": 3, "northwest": 3, "360": [3, 51, 55, 75], "degre": [3, 32, 49, 51, 55, 63, 72, 75], "clockwis": [3, 34, 51, 75, 164], "north": [3, 34, 42, 49, 51, 70, 75], "recommend": [3, 4, 18, 19, 32, 34, 36, 38, 39, 58, 59, 60, 62, 76, 81, 90, 94, 96, 97, 99, 100, 104, 105, 107, 108, 115, 127, 135, 137, 148, 150, 152, 168], "proper": [3, 6, 15, 42, 47, 56, 57, 58, 59, 63, 68, 70, 71, 97, 109, 119, 125, 145, 149, 150, 156, 157, 158, 167], "interpret": [3, 32, 57, 75, 97, 127, 162], "peopl": [3, 4, 12, 13, 86], "hillshade_altitude_degre": 3, "altitud": 3, "horizon": 3, "45": [3, 104], "90": [3, 27, 32, 49, 55, 67, 75, 105, 107, 136], "hillshade_latlon": 3, "correct": [3, 18, 19, 22, 30, 44, 58, 59, 67, 68, 71, 82, 88, 94, 97, 99, 103, 109, 119, 120, 124, 144, 148, 150, 151, 152], "unit": [3, 32, 49, 50, 51, 56, 75, 94, 125, 136, 158], "z": [3, 42, 57, 63, 70, 71, 88, 94, 102, 108, 142, 148, 149, 162, 164], "111200": 3, "reflect": [3, 4, 5, 16, 30, 115, 127, 148, 150, 152], "relat": [3, 7, 19, 24, 26, 58, 78, 102, 113, 126, 130, 132, 143], "pre": [3, 13, 35, 59, 90, 97], "pend": 3, "amr_": [3, 7], "whose": [3, 49, 82, 89, 101, 102, 144, 148, 149, 164], "origin": [3, 6, 13, 16, 18, 19, 22, 30, 32, 36, 37, 45, 47, 56, 58, 63, 70, 76, 77, 89, 104, 109, 119, 125, 132, 139, 149, 150, 151, 152, 164], "hand": [3, 5, 19, 20, 21, 22, 68, 88, 116, 118, 135, 136, 137, 142], "higher": [3, 6, 18, 19, 55, 94, 104, 105, 115, 130, 140, 142, 143, 144], "shorter": [3, 115, 164], "last": [3, 20, 29, 34, 36, 59, 61, 82, 88, 89, 101, 108, 118, 124, 135, 136, 137, 148, 158], "repeatedli": [3, 99, 105, 149], "finer": [3, 7, 19, 34, 55, 115, 119, 120, 142, 148, 149], "celledg": [3, 32, 49], "colorbar_shrink": [3, 32], "colorbar_label": 3, "colorbar_tick": 3, "colorbar_tick_label": 3, "colorbar_extend": [3, 136], "colorbar_kwarg": [3, 127], "stand": [4, 132], "conserv": [4, 5, 6, 17, 18, 19, 98, 104, 106, 128, 141, 167, 170], "law": [4, 17, 63, 151, 170], "packag": [4, 27, 30, 31, 38, 39, 55, 59, 60, 67, 77, 78, 81, 85, 86, 88, 94, 96, 98, 100, 101, 103, 105, 108, 110, 111, 118, 129, 130, 165, 168], "wa": [4, 5, 6, 14, 19, 21, 22, 27, 31, 32, 34, 35, 36, 37, 42, 49, 52, 54, 58, 59, 66, 68, 70, 71, 75, 82, 99, 103, 104, 106, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 139, 142, 144, 161, 162, 164], "initi": [4, 5, 7, 12, 13, 18, 19, 24, 27, 32, 36, 37, 47, 48, 49, 51, 52, 55, 59, 64, 67, 71, 72, 75, 77, 78, 84, 86, 87, 88, 89, 91, 92, 94, 95, 97, 98, 102, 103, 104, 106, 107, 109, 112, 115, 124, 127, 130, 132, 140, 143, 148, 149, 150, 152, 154, 158, 162, 164], "develop": [4, 6, 7, 12, 13, 19, 20, 24, 25, 45, 52, 56, 58, 61, 62, 65, 70, 71, 81, 85, 86, 89, 96, 101, 104, 105, 111, 113, 116, 118, 127, 128, 130, 132, 135, 136, 137, 140, 143, 144, 150], "linear": [4, 5, 17, 18, 19, 32, 36, 37, 47, 49, 55, 72, 75, 82, 88, 92, 104, 118, 128, 140, 141, 142], "nonlinear": [4, 5, 17, 52, 92, 140, 148, 170], "hyperbol": [4, 5, 6, 17, 18, 19, 45, 78, 89, 96, 101, 102, 108, 140, 148, 151, 167, 170], "system": [4, 16, 17, 18, 19, 25, 39, 40, 48, 55, 56, 62, 63, 67, 76, 77, 86, 96, 97, 98, 99, 101, 102, 105, 108, 111, 116, 118, 140, 148, 150, 152, 160, 167, 170], "focu": [4, 48], "high": [4, 17, 34, 52, 55, 70, 72, 75, 78, 89, 96, 104, 140, 143, 144, 166, 167], "resolut": [4, 6, 17, 32, 34, 36, 42, 47, 64, 72, 75, 94, 104, 108, 109, 119, 123, 127, 128, 135, 140, 143, 162, 164, 166, 167], "godunov": [4, 94, 104, 148, 150, 152, 167], "method": [4, 5, 7, 17, 19, 34, 36, 37, 41, 45, 47, 57, 70, 72, 82, 84, 88, 91, 92, 94, 99, 103, 104, 109, 115, 116, 123, 140, 147, 148, 149, 150, 152, 158, 161, 162, 164, 167], "framework": [4, 86, 89, 124, 125], "applic": [4, 6, 15, 16, 18, 19, 21, 22, 24, 25, 26, 30, 31, 36, 37, 38, 39, 40, 44, 45, 46, 47, 48, 50, 59, 61, 62, 67, 70, 76, 77, 84, 93, 94, 95, 96, 98, 104, 109, 112, 114, 115, 116, 118, 119, 122, 123, 125, 126, 127, 129, 130, 140, 142, 144, 145, 148, 151, 156, 157, 162, 164, 165, 167, 168], "finit": [4, 17, 34, 36, 45, 49, 57, 63, 70, 71, 72, 75, 104, 130, 142, 151, 161, 162, 167], "volum": [4, 17, 31, 34, 36, 45, 49, 57, 63, 70, 71, 72, 96, 130, 142, 149, 151, 161, 162, 167], "riemann": [4, 5, 8, 22, 24, 25, 30, 31, 48, 59, 62, 67, 78, 86, 88, 94, 95, 104, 105, 106, 108, 111, 146, 148, 150, 152, 156, 157, 170], "solver": [4, 5, 6, 22, 24, 25, 27, 30, 48, 49, 60, 61, 62, 67, 85, 86, 87, 91, 94, 95, 98, 106, 118, 121, 123, 125, 126, 127, 128, 129, 130, 132, 137, 148, 150, 152, 156, 157, 170], "resolv": [4, 34, 36, 55, 58, 62, 113, 127, 144], "jump": [4, 5, 71, 84, 94, 104, 125, 148, 170], "discontinu": [4, 104, 170], "interfac": [4, 21, 24, 71, 86, 89, 92, 96, 97, 102, 104, 109, 140, 167, 168, 170], "wave": [4, 5, 6, 16, 17, 18, 27, 34, 42, 48, 49, 52, 55, 56, 75, 92, 94, 96, 101, 102, 104, 115, 123, 125, 126, 132, 141, 142, 143, 148, 149, 150, 151, 152, 154, 167], "propag": [4, 5, 6, 17, 18, 19, 27, 32, 49, 52, 55, 56, 75, 94, 96, 104, 115, 125, 140], "neighbor": [4, 18, 19, 36, 42, 70, 72, 115, 125, 144, 149, 150, 164], "formul": [4, 5, 19, 52, 68, 140, 148], "allow": [4, 6, 13, 24, 29, 30, 31, 34, 36, 37, 41, 42, 47, 48, 51, 54, 55, 57, 58, 62, 68, 70, 71, 75, 76, 78, 81, 82, 91, 96, 97, 98, 104, 106, 109, 110, 111, 115, 116, 119, 120, 123, 124, 125, 126, 127, 129, 130, 132, 135, 136, 137, 140, 142, 148, 150, 151, 152, 153, 158, 162, 164, 166], "easi": [4, 6, 11, 31, 41, 62, 71, 89, 98, 99, 100, 142, 153, 167], "extens": [4, 17, 19, 24, 26, 30, 32, 52, 55, 58, 62, 67, 71, 89, 96, 97, 109, 125, 126, 132, 148, 160, 164, 170], "problem": [4, 5, 7, 16, 17, 18, 19, 22, 26, 27, 29, 30, 31, 38, 39, 42, 45, 48, 49, 62, 66, 70, 71, 72, 75, 78, 82, 85, 87, 88, 93, 95, 96, 99, 102, 104, 107, 111, 116, 119, 120, 122, 123, 126, 130, 132, 136, 137, 140, 142, 144, 148, 149, 150, 151, 152, 153, 154, 161, 165], "algorithm": [4, 7, 19, 27, 34, 41, 42, 48, 56, 88, 94, 96, 97, 104, 108, 115, 127, 140, 142, 148, 150, 152, 164], "brief": [4, 59, 141, 151], "subroutin": [4, 6, 9, 16, 24, 34, 36, 67, 115, 123, 140, 148, 149, 161, 167, 170], "equat": [4, 5, 16, 17, 18, 27, 38, 39, 48, 49, 52, 64, 68, 82, 87, 88, 89, 91, 96, 97, 98, 101, 104, 105, 106, 118, 120, 123, 125, 127, 128, 140, 148, 150, 151, 152, 154, 162, 167, 170], "solv": [4, 5, 8, 16, 17, 18, 19, 22, 28, 38, 39, 49, 52, 60, 62, 64, 87, 89, 91, 94, 96, 101, 102, 105, 118, 128, 140, 141, 148, 162, 167, 170], "adapt": [4, 7, 17, 19, 32, 42, 49, 56, 57, 70, 71, 78, 88, 115, 127, 130, 132, 140, 142, 147, 148, 149, 151, 167], "mesh": [4, 7, 17, 19, 35, 49, 56, 70, 71, 78, 81, 88, 115, 130, 147, 148, 167], "amrclaw": [4, 5, 6, 12, 15, 16, 19, 21, 22, 24, 25, 26, 30, 38, 39, 41, 42, 44, 46, 47, 48, 50, 56, 59, 60, 61, 62, 64, 70, 71, 76, 77, 78, 85, 96, 97, 105, 111, 112, 115, 116, 139, 140, 142, 145, 146, 148, 151, 156, 157, 160, 161, 165], "detail": [4, 5, 10, 16, 24, 25, 27, 28, 30, 31, 32, 34, 36, 38, 39, 41, 44, 47, 50, 52, 55, 58, 61, 62, 64, 65, 66, 70, 71, 75, 78, 82, 86, 91, 92, 93, 94, 96, 97, 98, 99, 100, 101, 102, 104, 114, 115, 116, 120, 125, 127, 132, 135, 140, 142, 147, 148, 151, 153, 158, 162, 165, 166, 167, 170], "content": [4, 6, 25, 37, 45, 55, 59, 77, 78, 89, 96, 151, 162, 167, 168], "routin": [4, 5, 6, 16, 18, 19, 22, 27, 29, 32, 34, 38, 39, 47, 48, 49, 50, 55, 56, 66, 71, 72, 76, 77, 78, 81, 84, 86, 89, 91, 94, 97, 100, 101, 104, 106, 107, 115, 118, 119, 120, 123, 125, 127, 128, 130, 140, 144, 148, 150, 152, 158, 164, 165, 167, 168, 170], "special": [4, 7, 16, 48, 50, 55, 65, 78, 86, 97, 115, 135, 142, 164], "depth": [4, 5, 16, 17, 18, 19, 24, 32, 34, 35, 37, 42, 47, 48, 49, 52, 68, 72, 75, 81, 83, 141, 143, 144, 151, 162], "averag": [4, 6, 15, 17, 18, 19, 34, 42, 48, 49, 52, 53, 57, 71, 72, 102, 106, 120, 132, 140, 144, 145, 162, 164, 167], "geophys": [4, 16, 17, 25, 48, 52, 78, 148], "flow": [4, 16, 17, 25, 34, 35, 48, 50, 52, 78, 96, 113, 118, 130, 135, 140, 148, 151, 162, 167], "geoclaw": [4, 7, 12, 17, 18, 19, 25, 26, 30, 31, 32, 34, 35, 36, 37, 39, 41, 44, 46, 47, 56, 57, 59, 60, 61, 62, 63, 64, 68, 70, 72, 75, 77, 78, 81, 85, 96, 105, 111, 113, 114, 116, 139, 140, 141, 143, 144, 146, 148, 149, 154, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167], "parallel": [4, 24, 25, 47, 76, 87, 93, 95, 96, 98, 101, 103, 105, 109, 115, 116, 118, 125, 149], "ten": [4, 78], "thousand": [4, 78], "core": [4, 12, 78, 116, 127, 137], "wish": [4, 13, 14, 15, 24, 31, 38, 39, 52, 55, 62, 71, 80, 81, 96, 101, 104, 105, 107, 111, 113, 115, 125, 145, 153, 156, 157, 165], "discrib": 4, "book": [4, 12, 17, 27, 31, 46, 85, 103, 140], "levequ": [4, 16, 17, 26, 32, 56, 78, 92, 94, 96, 104, 110, 140, 148, 167, 170], "fvmhp": [4, 12, 16, 17, 27, 46, 78, 140, 148, 167, 170], "virtual": [4, 13, 27, 29, 106], "were": [4, 6, 14, 19, 22, 34, 45, 47, 58, 64, 67, 71, 72, 89, 115, 118, 119, 125, 128, 132, 135, 136, 137, 142, 144, 154, 162], "4": [4, 7, 8, 9, 13, 16, 17, 20, 25, 27, 30, 32, 34, 35, 36, 39, 41, 42, 44, 45, 47, 48, 52, 55, 57, 58, 59, 66, 67, 68, 70, 71, 72, 76, 77, 81, 82, 84, 95, 96, 97, 98, 99, 101, 102, 104, 105, 109, 111, 115, 116, 118, 119, 124, 127, 132, 133, 135, 137, 139, 142, 148, 149, 150, 151, 152, 160, 161, 162, 164, 169], "3": [4, 6, 7, 15, 16, 19, 22, 24, 26, 27, 32, 34, 35, 36, 39, 41, 45, 47, 48, 55, 57, 59, 62, 63, 68, 71, 72, 75, 77, 82, 84, 85, 88, 91, 92, 94, 97, 98, 99, 102, 103, 104, 106, 110, 111, 115, 125, 127, 130, 136, 138, 140, 142, 145, 148, 149, 150, 151, 152, 160, 161, 162, 164, 167, 170], "pointer": [4, 16, 18, 19, 58, 75, 81, 84, 104, 109, 123], "code": [4, 5, 6, 7, 8, 12, 14, 16, 21, 22, 23, 24, 25, 26, 29, 31, 34, 35, 36, 37, 38, 39, 41, 43, 44, 45, 47, 48, 49, 52, 54, 56, 57, 58, 60, 65, 66, 67, 68, 74, 75, 76, 77, 78, 80, 82, 84, 85, 86, 88, 89, 94, 96, 97, 98, 99, 101, 104, 105, 108, 110, 111, 114, 117, 118, 119, 120, 123, 124, 125, 126, 127, 128, 129, 130, 132, 137, 139, 140, 141, 142, 146, 148, 149, 150, 151, 152, 153, 158, 160, 161, 162], "bibliographi": [4, 27], "paper": [4, 5, 6, 16, 19, 32, 48, 58, 92, 96], "distribut": [4, 12, 13, 31, 32, 58, 65, 75, 78, 86, 104, 110, 130], "under": [4, 7, 24, 34, 36, 40, 55, 56, 58, 61, 65, 67, 81, 86, 94, 96, 116, 125, 127, 138], "term": [4, 18, 19, 27, 48, 49, 52, 65, 75, 89, 94, 95, 104, 115, 118, 126, 127, 136, 137, 141, 148, 150, 151, 152, 156, 157], "berkelei": [4, 65, 86], "bsd": [4, 65, 86, 127], "contribut": [4, 26, 27, 61, 86, 89, 96, 101, 104, 113, 116], "its": [4, 6, 13, 18, 19, 24, 31, 34, 42, 52, 55, 65, 67, 70, 75, 77, 86, 91, 92, 93, 94, 96, 101, 103, 104, 106, 109, 115, 150, 164, 170], "incept": 4, "1994": [4, 65], "major": [4, 24, 59, 86, 89, 117, 119, 120, 121, 126, 128, 133, 136, 137], "design": [4, 29, 30, 55, 86, 88, 108, 142, 166], "made": [4, 19, 20, 24, 30, 32, 37, 62, 103, 106, 118, 119, 120, 125, 127, 130, 132, 135, 136, 137, 142, 144, 151, 159, 162, 164, 167], "individu": [4, 24, 25, 55, 63, 66, 67, 71, 94, 115, 116, 158], "randal": [4, 17, 96], "univers": [4, 17, 26, 58, 65, 86, 103], "washington": [4, 17, 26, 58, 65, 129, 142, 164], "rjlevequ": [4, 19, 30, 31], "marsha": [4, 6, 17], "berger": [4, 6, 17], "courant": [4, 6, 49, 115, 126, 148, 149, 150, 152], "institut": 4, "nyu": 4, "mjberger": 4, "jan": [4, 59], "olav": 4, "langseth": [4, 17], "norwegian": 4, "defenc": 4, "research": [4, 17, 48, 52, 86, 104, 114], "establish": 4, "david": [4, 17, 86, 96, 104], "georg": [4, 17, 32], "usg": [4, 32, 166], "cascad": 4, "volcano": 4, "observatori": 4, "dlgeorg": 4, "ketcheson": [4, 17, 79, 86, 96, 104], "kaust": [4, 26], "ketch": 4, "kyle": [4, 17, 86, 92, 96, 97, 102], "mandli": [4, 17, 86, 92, 96, 97, 102], "ut": 4, "austin": 4, "contributor": [4, 26, 65, 96], "aron": [4, 17, 86, 96], "ahmadia": [4, 17, 86, 96], "amal": [4, 17, 86, 96], "alghamdi": [4, 17, 86, 96], "ghamdi": 4, "ian": 4, "bollig": 4, "bolliger32": 4, "peter": 4, "blossei": 4, "donna": [4, 17], "calhoun": [4, 17, 55], "donnabois": 4, "ond\u0159ej": 4, "\u010dert\u00edk": 4, "certik": [4, 86], "brisa": 4, "davi": [4, 17], "brisadavi": [4, 128], "gradi": [4, 17, 86], "lemoin": [4, 17, 86], "gradylemoin": 4, "sorin": 4, "mitran": [4, 17], "matteo": [4, 17, 86, 96], "parsani": [4, 17, 86, 96], "mparsani": 4, "xinsheng": [4, 56], "qin": [4, 56], "xinshengqin": [4, 56], "avi": 4, "schwarzschild": 4, "aks2203": 4, "andi": 4, "terrel": 4, "aterrel": 4, "chri": 4, "vogl": 4, "cjvogl": 4, "numer": [4, 17, 55, 110, 128], "student": 4, "toward": [4, 32], "bug": [4, 8, 12, 24, 26, 44, 55, 68, 76, 82, 86, 118, 122, 123, 124, 125, 127, 132, 133, 134, 137], "suggest": [4, 18, 19, 26, 31, 51, 57, 58, 60, 62, 84, 85, 110, 138, 140, 151, 169], "improv": [4, 13, 24, 26, 34, 36, 55, 58, 97, 110, 118, 119, 120, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 148], "explor": [4, 36, 63, 82, 84], "thank": [4, 96], "pleas": [4, 26, 30, 58, 60, 61, 62, 86, 88, 91, 93, 96, 97, 99, 101, 103, 104, 105, 107, 113, 127, 132, 138, 140, 158], "itself": [4, 75, 81, 110, 130, 140, 151, 164], "well": [4, 6, 19, 30, 35, 48, 49, 55, 56, 58, 62, 63, 70, 75, 76, 77, 78, 81, 84, 85, 103, 104, 113, 126, 127, 130, 135, 141, 144, 148, 149, 156, 157, 158, 167, 170], "citat": [4, 19, 59], "similar": [4, 13, 16, 18, 30, 34, 36, 39, 47, 49, 55, 64, 88, 89, 97, 101, 104, 108, 127, 132, 151, 158, 159, 160, 162], "team": [4, 26, 65], "2020": [4, 26, 27, 58, 65, 110, 113, 130, 131, 132, 138, 140], "7": [4, 6, 14, 31, 34, 36, 41, 42, 47, 51, 58, 64, 68, 70, 77, 82, 85, 94, 105, 111, 115, 132, 138, 142, 143, 144, 149, 150], "http": [4, 12, 13, 17, 19, 26, 28, 30, 31, 32, 42, 51, 55, 56, 58, 59, 61, 62, 65, 70, 75, 85, 86, 89, 90, 97, 99, 101, 110, 111, 118, 122, 124, 125, 126, 128, 129, 132, 133, 134, 135, 136, 137, 138, 141, 158, 164], "www": [4, 13, 17, 32, 42, 48, 58, 65, 70, 86, 89, 94, 97, 99, 118, 126, 128, 135, 136, 158, 164], "org": [4, 17, 19, 48, 56, 58, 59, 65, 86, 89, 90, 94, 97, 99, 110, 111, 118, 124, 126, 128, 132, 133, 134, 135, 136, 137, 164], "doi": [4, 17, 56, 59, 61, 118, 130, 131, 132, 133, 134, 135, 136, 137, 138], "10": [4, 17, 18, 19, 30, 32, 34, 36, 42, 49, 55, 56, 57, 59, 82, 88, 91, 94, 115, 124, 125, 127, 130, 131, 132, 133, 134, 135, 136, 137, 138, 142, 148, 149, 150, 152, 154, 162], "5281": [4, 59, 118, 130, 131, 132, 133, 134, 135, 136, 137, 138], "zenodo": [4, 61, 118, 130, 131, 132, 133, 134, 135, 136, 137, 138], "4025432": [4, 131, 138], "here": [4, 13, 16, 18, 19, 31, 36, 41, 42, 52, 59, 62, 63, 70, 78, 82, 84, 88, 91, 96, 97, 99, 101, 102, 107, 108, 111, 113, 115, 123, 140, 141, 142, 159, 164, 170], "bibtex": [4, 59], "misc": [4, 129, 131], "url": [4, 12, 17, 55, 59, 127, 128, 162, 164], "year": [4, 17, 24, 55, 63, 96, 117, 128, 158], "releas": [4, 19, 20, 24, 27, 30, 31, 46, 49, 55, 60, 61, 62, 90, 96, 97, 104, 105, 110], "refer": [4, 5, 19, 22, 32, 34, 35, 36, 38, 39, 41, 48, 50, 55, 59, 66, 67, 71, 75, 88, 92, 94, 97, 98, 102, 104, 106, 111, 113, 127, 129, 139, 140, 142, 151, 158, 162, 164, 166, 167], "particular": [4, 6, 12, 22, 24, 30, 32, 34, 44, 47, 48, 50, 52, 55, 56, 59, 65, 66, 67, 71, 78, 82, 83, 85, 86, 88, 102, 103, 104, 106, 108, 113, 114, 115, 116, 118, 120, 123, 124, 125, 126, 127, 129, 130, 132, 147, 158, 159, 170], "obtain": [4, 6, 12, 34, 46, 47, 49, 50, 52, 62, 63, 72, 97, 98, 99, 115, 118, 132, 140, 144, 153, 162, 170], "your": [4, 6, 15, 16, 18, 19, 21, 22, 26, 27, 28, 36, 38, 40, 44, 47, 57, 58, 59, 60, 61, 62, 76, 81, 82, 84, 86, 87, 88, 89, 90, 93, 95, 96, 97, 98, 107, 108, 110, 111, 112, 113, 115, 116, 119, 127, 137, 140, 145, 146, 156, 157, 162, 165, 167], "multipl": [4, 5, 6, 13, 25, 30, 34, 35, 42, 47, 81, 88, 94, 97, 98, 109, 111, 116, 119, 125, 129, 139, 140, 149, 158, 159], "past": [4, 23, 27, 58, 64, 70, 103, 125, 128, 132, 138, 142, 143, 151], "17605": [4, 59, 138], "osf": [4, 138], "io": [4, 58, 59, 85, 98, 103, 138], "kmw6h": [4, 59, 138], "recent": [4, 13, 24, 29, 32, 49, 54, 58, 61, 66, 68, 76, 82, 84, 85, 118, 124, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 140, 154, 166], "articl": [4, 17, 96, 153], "l": [4, 7, 17, 34, 43, 61, 115, 140, 146, 150], "hadjimichael": [4, 17, 86], "2016": [4, 17, 26, 58], "build": [4, 17, 30, 31, 58, 59, 62, 71, 89, 99, 109, 126, 137, 142], "open": [4, 13, 17, 27, 30, 31, 32, 51, 55, 63, 81, 86, 90, 94, 97, 109, 142, 146, 166, 168], "ecosystem": [4, 17], "pde": [4, 5, 17, 60, 61, 62, 78, 85, 96, 108, 148, 167], "peerj": [4, 17], "scienc": [4, 17, 86], "7717": [4, 17], "c": [4, 16, 17, 30, 31, 32, 44, 55, 63, 65, 82, 86, 88, 89, 94, 102, 107, 108, 140], "68": [4, 17], "mandli2016clawpack": [4, 17], "yianni": [4, 17, 86], "journal": [4, 17, 56, 96, 153], "e68": [4, 17], "publish": [4, 17, 58, 96], "inc": [4, 17, 71], "least": [4, 5, 6, 13, 37, 47, 55, 63, 64, 70, 71, 107, 115, 116, 124, 125, 132, 148, 150, 154, 162, 164], "regard": [4, 41, 124, 158], "click": [4, 12, 13, 20, 30, 55, 58, 59, 116, 118, 126, 135, 136, 137, 138], "link": [4, 11, 13, 15, 17, 20, 21, 22, 26, 27, 30, 34, 36, 44, 45, 48, 55, 56, 57, 58, 59, 61, 63, 110, 111, 112, 118, 126, 135, 136, 137, 138, 140, 141, 143, 145, 152, 156, 157, 162, 166], "classic": [4, 6, 12, 15, 16, 21, 22, 24, 25, 26, 30, 44, 45, 46, 50, 59, 60, 61, 62, 67, 74, 76, 77, 78, 85, 86, 88, 91, 93, 94, 95, 96, 97, 101, 111, 112, 116, 139, 140, 145, 146, 149, 151, 157, 165, 167], "2d": [4, 7, 8, 15, 16, 18, 21, 24, 27, 29, 32, 34, 36, 37, 41, 42, 48, 49, 51, 56, 63, 71, 76, 81, 86, 88, 94, 96, 100, 104, 110, 112, 115, 118, 123, 125, 126, 127, 128, 129, 132, 136, 141, 142, 144, 145, 148, 149, 152, 154, 156, 157, 164, 168, 170], "leveque97": [4, 17], "3d": [4, 7, 15, 19, 24, 32, 71, 76, 81, 86, 96, 100, 104, 112, 115, 118, 119, 121, 123, 124, 125, 128, 136, 140, 142, 145, 148, 149, 156, 157, 168, 170], "langsethleveque00": [4, 17], "amr": [4, 7, 8, 16, 18, 19, 22, 25, 27, 29, 30, 34, 36, 37, 41, 47, 48, 49, 56, 63, 71, 72, 73, 77, 78, 81, 86, 94, 118, 124, 126, 127, 128, 130, 132, 135, 144, 147, 148, 150, 152, 161, 167], "bergerleveque98": [4, 6, 7, 17], "f": [4, 5, 6, 16, 17, 18, 22, 24, 27, 29, 30, 33, 66, 67, 89, 91, 97, 98, 101, 102, 104, 106, 107, 109, 119, 123, 126, 127, 128, 132, 141, 148, 149, 150, 152, 164, 165, 167], "balelevmitross02": [4, 17, 148, 170], "bergergeorgelevequemandli11": [4, 17], "levequegeorgeberg": [4, 17], "order": [4, 5, 6, 13, 16, 17, 18, 19, 31, 32, 34, 36, 47, 52, 57, 62, 64, 67, 70, 71, 72, 75, 77, 78, 82, 84, 85, 86, 88, 91, 92, 94, 96, 97, 98, 100, 101, 104, 108, 109, 110, 111, 115, 118, 123, 127, 132, 136, 140, 142, 144, 147, 148, 149, 150, 152, 158, 162, 164, 165, 167, 170], "sharpclaw": [4, 25, 27, 78, 86, 93, 95, 96, 101, 119, 140], "ketparlev13": [4, 17, 78, 96, 140], "ketchesonmandliet": [4, 17], "support": [4, 8, 13, 18, 19, 24, 36, 37, 41, 44, 49, 52, 55, 60, 61, 73, 75, 77, 85, 86, 88, 89, 94, 97, 98, 100, 102, 104, 115, 118, 123, 125, 126, 127, 128, 132, 133, 135, 136, 140, 142, 148, 149, 151, 158, 159, 162, 165, 168], "part": [4, 5, 19, 24, 26, 32, 36, 48, 51, 52, 62, 63, 64, 86, 89, 99, 105, 106, 108, 110, 114, 116, 118, 129, 167], "nsf": 4, "grant": [4, 86], "dm": 4, "8657319": 4, "9204329": 4, "9303404": 4, "9505021": 4, "96226645": 4, "9803442": 4, "0106511": 4, "cm": [4, 32, 75, 82, 142], "0245206": 4, "0609661": 4, "0914942": 4, "1216732": 4, "ear": 4, "1331412": 4, "cmmi": 4, "1536198": 4, "doe": [4, 5, 11, 16, 19, 22, 29, 30, 36, 42, 43, 49, 52, 55, 57, 58, 62, 71, 78, 82, 85, 94, 103, 106, 109, 115, 116, 120, 125, 129, 132, 135, 139, 140, 141, 144, 158, 164, 165, 167], "de": [4, 17, 86, 96, 142], "fg06": 4, "93er25181": 4, "fg03": 4, "96er25292": 4, "fg02": 4, "88er25053": 4, "92er25139": 4, "00er2592": 4, "fc02": 4, "01er25474": 4, "afosr": 4, "f49620": 4, "94": 4, "0132": 4, "nih": 4, "5r01ar53652": 4, "onr": 4, "n00014": 4, "09": [4, 94, 102, 161], "0649": 4, "council": 4, "nfr": 4, "through": [4, 13, 30, 36, 38, 39, 47, 49, 52, 55, 70, 71, 78, 81, 89, 101, 106, 108, 109, 111, 114, 115], "program": [4, 50, 52, 67, 78], "101039": 4, "420": 4, "scientif": [4, 17, 85, 96, 99, 110, 137], "divis": [4, 55], "nation": [4, 52, 158], "center": [4, 5, 29, 32, 34, 35, 36, 37, 42, 47, 55, 57, 63, 72, 75, 88, 94, 101, 102, 108, 115, 127, 142, 144, 149, 150, 151, 158, 159, 162, 167], "atmospher": 4, "ncar": 4, "boe": 4, "professorship": 4, "founder": 4, "depart": [4, 158], "mathemat": 4, "comot": 4, "fellowship": 4, "king": [4, 86], "abdullah": [4, 86], "technologi": [4, 86], "contract": [4, 65, 86], "state": [4, 13, 17, 19, 27, 30, 58, 75, 82, 88, 89, 91, 94, 96, 97, 98, 99, 101, 102, 103, 104, 107, 108, 116, 132, 133, 140, 141, 142, 148, 162, 170], "emerg": 4, "manag": [4, 12, 13, 55, 98, 158], "tsunami": [4, 5, 16, 17, 19, 26, 27, 34, 36, 42, 48, 50, 56, 68, 75, 98, 115, 119, 122, 128, 129, 135, 142, 143, 144, 151, 159, 162], "hazard": [4, 34, 48, 68, 143], "mitig": [4, 52], "nasa": 4, "asteroid": [4, 19], "threat": 4, "assess": [4, 52, 143], "project": [4, 5, 26, 27, 32, 52, 55, 58, 59, 75, 86, 90, 125, 126, 137, 149, 164], "planetari": 4, "defens": 4, "offic": 4, "opinion": 4, "conclus": [4, 55], "express": [4, 32, 65, 86, 105, 142], "materi": [4, 45, 65, 75, 86, 113, 130], "those": [4, 6, 10, 12, 18, 19, 24, 26, 52, 55, 56, 59, 70, 78, 88, 89, 91, 98, 101, 106, 115, 116, 119, 130, 132, 138, 139, 153, 160, 164, 167], "necessarili": [4, 42, 77, 97, 116], "agenc": [4, 60, 158, 159], "approach": [5, 7, 13, 18, 19, 30, 31, 41, 47, 49, 58, 61, 74, 81, 89, 96, 99, 101, 109, 115, 123, 125, 126, 128, 140, 141, 147, 167, 170], "introduc": [5, 16, 21, 34, 35, 36, 37, 42, 49, 82, 118, 130, 132, 139, 142, 144, 149, 170], "6": [5, 19, 24, 27, 30, 32, 34, 36, 41, 42, 44, 47, 51, 52, 55, 58, 63, 68, 70, 71, 72, 76, 82, 95, 96, 97, 101, 102, 104, 105, 110, 111, 115, 130, 138, 140, 142, 148, 149, 162, 169], "what": [5, 6, 9, 13, 14, 18, 19, 24, 27, 30, 32, 33, 34, 41, 49, 52, 54, 55, 58, 59, 61, 62, 63, 66, 67, 70, 71, 72, 77, 81, 88, 91, 95, 103, 106, 108, 111, 114, 115, 116, 124, 142, 143, 147, 148, 150, 151, 152, 153, 162, 164, 166, 167], "forward": [5, 64, 104, 115, 128, 167], "becaus": [5, 18, 19, 24, 29, 34, 36, 42, 55, 59, 70, 72, 97, 98, 99, 119, 140, 143, 148], "impact": [5, 19, 75], "autonom": 5, "shift": [5, 32, 52, 57], "perform": [5, 6, 17, 24, 29, 52, 55, 57, 76, 78, 81, 82, 91, 94, 97, 101, 104, 109, 116, 129, 132, 139, 140, 146, 151, 160], "snapshot": [5, 30, 98, 128], "save": [5, 13, 27, 28, 35, 36, 37, 42, 54, 63, 77, 91, 95, 104, 124, 125, 127, 132, 139, 159, 164], "space": [5, 6, 7, 16, 17, 27, 32, 34, 35, 36, 37, 47, 48, 51, 55, 57, 75, 77, 94, 98, 101, 115, 118, 123, 135, 139, 142, 148, 149, 150, 151, 152, 162, 164, 167], "interpol": [5, 6, 16, 19, 27, 32, 35, 37, 42, 47, 48, 57, 63, 64, 71, 75, 82, 118, 125, 132, 135, 142, 143, 144, 158, 159, 164], "regrid": [5, 10, 115, 119, 120, 125, 128, 129, 149, 150, 161], "davisleveque2018": [5, 17], "davis2018": [5, 17], "discuss": [5, 18, 19, 26, 30, 32, 52, 57, 70, 75, 97, 108, 110, 111, 115, 118, 125, 127, 140, 151, 154, 170], "when": [5, 14, 15, 16, 19, 22, 30, 31, 32, 34, 36, 37, 42, 43, 44, 47, 49, 53, 54, 55, 57, 58, 59, 61, 62, 64, 68, 70, 71, 75, 76, 77, 78, 81, 82, 84, 88, 95, 96, 97, 99, 100, 104, 107, 111, 115, 116, 118, 119, 120, 122, 124, 125, 126, 130, 132, 134, 135, 136, 140, 142, 143, 144, 145, 147, 148, 149, 150, 151, 152, 153, 158, 162, 164, 165, 166, 167, 168, 170], "accur": [5, 18, 19, 49, 52, 72, 75, 96, 104, 132, 148, 167, 170], "entir": [5, 6, 36, 41, 52, 55, 63, 70, 72, 75, 76, 78, 88, 98, 103, 113, 115, 120, 142, 164], "domain": [5, 6, 16, 17, 35, 36, 41, 42, 49, 52, 55, 58, 63, 75, 77, 87, 88, 89, 91, 99, 101, 103, 106, 113, 115, 118, 135, 149, 150, 151, 152, 162], "dimens": [5, 6, 7, 16, 22, 24, 27, 47, 48, 51, 57, 63, 71, 72, 88, 89, 91, 97, 99, 101, 102, 103, 106, 108, 115, 118, 127, 130, 140, 148, 149, 150, 152, 164, 167], "int_a": 5, "phi": 5, "dx": [5, 15, 17, 32, 34, 35, 36, 51, 57, 64, 75, 77, 89, 94, 98, 123, 127, 145, 162, 164, 167], "leq": [5, 142], "backward": [5, 30, 32, 35, 51, 63, 75, 77, 97, 120, 121, 136, 164], "small": [5, 16, 19, 36, 42, 47, 68, 70, 115, 116, 118, 119, 124, 139, 148, 150, 151, 162, 164, 166], "sai": [5, 13, 16, 30, 63, 107, 115], "x_1": [5, 142], "x_2": [5, 142], "might": [5, 10, 13, 14, 16, 24, 30, 31, 37, 38, 39, 40, 41, 42, 51, 55, 57, 58, 62, 67, 70, 71, 72, 76, 82, 85, 88, 98, 102, 111, 113, 114, 115, 119, 148, 149, 162, 164, 166, 167], "box": [5, 32, 35, 55, 63, 142, 164], "interv": [5, 47, 49, 51, 88, 108, 115, 132, 142, 148, 151], "elsewher": [5, 26, 42, 96, 142], "sharpli": 5, "peak": 5, "gaussian": [5, 88, 108, 152], "final": [5, 32, 37, 44, 58, 64, 71, 75, 88, 91, 98, 108, 113, 119, 139, 141, 148, 150, 152, 164], "necessari": [5, 6, 13, 18, 19, 30, 36, 37, 38, 39, 50, 52, 55, 58, 59, 62, 63, 71, 75, 77, 78, 84, 88, 89, 94, 97, 118, 123, 125, 127, 139, 140, 147, 148, 149, 162, 165, 167], "place": [5, 16, 22, 26, 30, 32, 38, 39, 55, 58, 62, 66, 67, 74, 96, 98, 99, 101, 105, 111, 119, 125, 137, 167], "earlier": [5, 19, 22, 24, 32, 34, 41, 47, 57, 75, 88, 101, 119, 126, 139, 162, 164], "help": [5, 7, 9, 25, 26, 27, 30, 31, 42, 43, 53, 58, 60, 66, 81, 84, 96, 99, 105, 109, 116, 124, 130, 140, 153, 165], "identifi": [5, 38, 39, 42, 55, 70, 89, 115, 130, 158], "hat": 5, "given": [5, 19, 32, 42, 51, 55, 57, 63, 68, 71, 75, 92, 97, 99, 103, 104, 106, 109, 115, 132, 142, 143, 144, 151, 162, 164, 167], "t_r": 5, "reach": [5, 115, 139], "acoustics_1d_adjoint": 5, "acoustics_2d_adjoint": 5, "main": [5, 11, 12, 19, 21, 30, 42, 46, 58, 59, 70, 71, 78, 89, 91, 97, 101, 108, 109, 116, 118, 126, 135], "subdirectori": [5, 12, 22, 24, 25, 38, 39, 58, 59, 62, 66, 74, 84, 93, 98, 111, 116, 135, 147, 151, 153, 160, 164], "must": [5, 6, 13, 16, 18, 19, 22, 24, 30, 32, 34, 36, 42, 46, 49, 50, 55, 58, 61, 65, 66, 67, 70, 71, 75, 76, 77, 86, 89, 96, 97, 98, 101, 103, 104, 106, 107, 108, 109, 111, 115, 119, 123, 140, 142, 143, 144, 148, 149, 150, 151, 152, 158, 164, 165, 166, 167, 170], "makefil": [5, 6, 11, 14, 15, 16, 21, 22, 25, 27, 30, 36, 38, 39, 44, 58, 76, 78, 82, 84, 89, 95, 96, 115, 118, 119, 123, 125, 127, 128, 130, 136, 144, 145, 148, 150, 151, 152, 153, 156, 157, 162, 165, 167], "coeffici": [5, 68, 101, 102, 104, 106, 107, 108, 140, 151], "matric": [5, 140, 170], "transpos": 5, "vice": 5, "versa": 5, "q_t": [5, 101, 102, 104, 108, 167, 170], "q_x": [5, 102, 108, 170], "_x": [5, 42, 70, 102, 104, 164, 167, 170], "eigenvalu": 5, "unchang": [5, 71], "upon": [5, 106], "transform": [5, 44], "eigenvector": [5, 140, 170], "right": [5, 19, 32, 34, 65, 68, 75, 86, 94, 99, 101, 102, 106, 108, 132, 139, 140, 142, 170], "rp1_acoustics_variable_adjoint": 5, "f90": [5, 9, 15, 18, 19, 22, 33, 34, 36, 42, 47, 49, 56, 66, 67, 76, 77, 85, 101, 112, 115, 119, 123, 125, 127, 128, 129, 130, 132, 133, 136, 140, 141, 144, 145, 154, 156, 157, 162, 165, 167], "boundari": [5, 7, 19, 22, 27, 42, 55, 63, 67, 70, 75, 76, 89, 94, 102, 104, 108, 113, 120, 123, 127, 142, 148, 150, 152], "condit": [5, 7, 19, 22, 27, 65, 67, 78, 86, 87, 88, 89, 91, 98, 104, 112, 119, 120, 123, 127, 143, 148, 150, 151, 152], "adjust": [5, 13, 18, 19, 22, 34, 35, 48, 63, 77, 94, 98, 136, 139, 143, 148, 167], "principl": [5, 164, 167], "vanish": 5, "dure": [5, 24, 34, 42, 47, 63, 75, 78, 119, 143, 144, 150, 151, 152, 154, 162], "integr": [5, 24, 57, 64, 86, 96, 98, 104, 119, 120, 124, 150, 152, 161, 162, 167], "qinit": [5, 22, 24, 42, 48, 66, 67, 89, 132, 143, 144, 167], "setrun": [5, 6, 7, 8, 14, 16, 21, 22, 27, 34, 35, 36, 37, 38, 39, 41, 42, 43, 45, 48, 49, 50, 52, 63, 64, 66, 68, 70, 77, 78, 82, 96, 112, 113, 115, 119, 123, 124, 125, 128, 130, 132, 135, 136, 137, 139, 140, 143, 144, 154, 158, 162, 165, 167], "clawdata": [5, 19, 41, 49, 77, 119, 123, 139, 148, 149, 150, 151, 152], "tfinal": [5, 77, 88, 91, 108, 139, 148, 150, 152], "via": [5, 13, 24, 25, 26, 30, 31, 32, 36, 38, 39, 44, 47, 50, 52, 55, 58, 59, 61, 62, 64, 66, 70, 71, 75, 76, 78, 82, 85, 88, 94, 97, 100, 103, 105, 107, 111, 115, 116, 118, 127, 130, 140, 142, 146, 151, 153, 156, 157, 162, 164, 167], "num_output_tim": [5, 77, 88, 91, 98, 139, 148, 150, 152], "larg": [5, 6, 12, 19, 22, 36, 37, 38, 39, 42, 52, 55, 57, 58, 71, 76, 81, 96, 98, 99, 115, 116, 118, 124, 132, 135, 139, 142, 144, 148, 149, 164, 166], "frequent": [5, 22, 29, 36, 47, 64, 107, 124, 135], "enough": [5, 47, 49, 58, 64, 70, 149, 159, 161, 162], "them": [5, 13, 20, 24, 30, 31, 32, 34, 47, 51, 55, 58, 71, 78, 86, 88, 93, 97, 98, 99, 101, 109, 113, 116, 118, 120, 129, 135, 136, 137, 142, 155, 158, 164, 167], "reason": [5, 19, 49, 52, 55, 63, 75, 76, 78, 99, 101, 115, 148], "output_format": [5, 36, 37, 77, 91, 98, 135, 148, 150, 152], "binari": [5, 36, 44, 47, 59, 65, 86, 98, 100, 124, 135, 136, 139, 148, 164, 168], "manner": [5, 36, 42, 47, 55, 64, 70, 75, 81, 127, 144, 148, 156, 157, 162], "attribut": [5, 7, 18, 24, 32, 36, 37, 41, 47, 70, 75, 81, 83, 84, 88, 91, 94, 97, 99, 101, 103, 104, 115, 118, 119, 124, 128, 136, 139, 147, 148, 149, 151, 158, 164], "clawutil": [5, 11, 14, 21, 22, 25, 30, 43, 44, 54, 59, 60, 61, 66, 111, 116, 146, 148, 149, 150, 152, 164, 165], "clawrundata": [5, 47, 63, 128, 139, 148, 149, 150, 152], "adjointdata": [5, 128, 129], "ia": 5, "attribur": 5, "toler": [5, 34, 102, 109, 115, 116, 125, 149, 150, 151], "rundata": [5, 18, 19, 24, 34, 36, 41, 42, 47, 49, 63, 64, 115, 119, 130, 137, 139, 144, 148, 149, 150, 151, 152, 154], "use_adjoint": 5, "adjoint_outdir": 5, "abspath": [5, 41], "_output": [5, 13, 14, 34, 36, 38, 39, 47, 54, 64, 71, 82, 84, 93, 98, 100, 103, 124, 131, 165], "period": [5, 6, 16, 34, 66, 88, 101, 115, 118, 148, 150, 152], "t1": [5, 41, 47, 63, 64, 115, 132, 149, 150, 151], "t0": [5, 18, 19, 77, 139, 148, 150, 151, 152, 162], "t2": [5, 41, 47, 63, 64, 115, 132, 149, 150, 151], "addit": [5, 7, 13, 16, 17, 19, 25, 26, 30, 31, 34, 36, 39, 40, 41, 48, 49, 50, 63, 70, 75, 77, 78, 82, 83, 89, 92, 94, 96, 98, 104, 105, 106, 113, 115, 118, 123, 125, 126, 127, 128, 131, 132, 134, 135, 136, 140, 142, 148, 152, 158, 161, 162, 167, 168], "aux": [5, 6, 15, 22, 24, 29, 47, 57, 89, 96, 97, 98, 101, 103, 104, 106, 107, 119, 120, 125, 127, 140, 141, 145, 148, 149, 150, 151, 152, 167], "inner": [5, 115, 128], "product": [5, 32, 65, 86, 109, 115, 128], "amrdata": [5, 24, 34, 115, 130, 132, 149, 150, 151], "aux_typ": [5, 149, 150], "append": [5, 22, 34, 36, 41, 42, 47, 55, 64, 82, 91, 103, 115, 124, 125, 137, 139, 140, 150, 151], "num_aux": [5, 89, 97, 99, 101, 102, 106, 140, 148, 149, 150, 152, 167], "len": [5, 32, 37, 94, 150, 152, 164], "innerprod_index": 5, "base": [5, 6, 13, 19, 22, 23, 24, 30, 31, 32, 34, 35, 36, 48, 49, 51, 55, 56, 57, 58, 63, 64, 67, 68, 70, 71, 75, 78, 89, 91, 92, 94, 96, 97, 102, 103, 104, 106, 108, 109, 115, 117, 123, 126, 128, 132, 135, 136, 143, 148, 149, 150, 151, 152, 158, 164, 167, 170], "richardson": [5, 7, 24, 149, 150], "error": [5, 16, 22, 38, 39, 43, 55, 62, 71, 76, 82, 91, 96, 97, 98, 109, 115, 116, 128, 132, 137, 149, 150, 158, 165], "estimat": [5, 150], "flag_richardson": [5, 115, 124, 149, 150], "flag_richardson_tol": [5, 115, 149, 150], "1e": [5, 70, 152], "flag2refin": [5, 7, 24, 149, 150], "flag2refine_tol": [5, 115, 149, 150], "01": [5, 17, 42, 77, 94, 164], "we": [5, 6, 18, 19, 24, 26, 28, 34, 38, 39, 41, 42, 47, 52, 55, 57, 58, 59, 60, 62, 67, 70, 72, 75, 81, 84, 88, 89, 90, 91, 93, 94, 97, 98, 99, 100, 101, 104, 105, 106, 107, 108, 109, 110, 113, 116, 127, 130, 135, 137, 140, 141, 142, 164], "attempt": [5, 8, 11, 22, 35, 38, 39, 66, 97, 103, 109, 116, 119, 133, 158, 164, 165], "estim": [5, 68, 115, 149, 151], "step": [5, 6, 10, 16, 18, 19, 21, 30, 34, 36, 38, 39, 40, 47, 55, 58, 59, 64, 71, 77, 78, 81, 84, 86, 87, 88, 89, 91, 98, 101, 104, 106, 108, 113, 115, 118, 119, 124, 125, 135, 139, 140, 146, 148, 149, 150, 151, 152, 162, 170], "extrapol": [5, 7, 16, 24, 72, 101, 108, 127, 148, 149, 150, 152], "togeth": [5, 16, 30, 31, 32, 58, 60, 75, 115, 135], "experiment": [5, 86], "simpli": [5, 13, 19, 36, 38, 39, 40, 42, 47, 49, 55, 57, 66, 67, 70, 72, 88, 90, 91, 93, 98, 99, 105, 116, 118, 140, 142, 153, 158, 164, 167, 168], "magnitud": [5, 32, 115, 127, 151], "greater": [5, 34, 63, 68, 70, 105, 115, 139, 148, 149, 151], "model": [5, 12, 16, 17, 18, 19, 26, 27, 32, 34, 44, 48, 49, 50, 56, 57, 68, 98, 115, 124, 129, 130, 131, 142, 143, 144, 151, 154, 158, 159, 162], "davisleveque2016": [5, 17], "chile2010_adjoint": 5, "shallow": [5, 15, 16, 17, 18, 19, 27, 34, 36, 42, 48, 49, 52, 56, 70, 78, 89, 96, 112, 118, 120, 121, 123, 125, 127, 128, 136, 137, 140, 144, 145, 151, 156, 157, 162, 167], "water": [5, 16, 17, 18, 19, 27, 36, 42, 47, 48, 49, 50, 51, 52, 63, 70, 78, 81, 89, 96, 118, 120, 121, 125, 127, 128, 137, 140, 142, 143, 144, 151, 162, 164, 166, 167], "while": [5, 13, 16, 19, 32, 42, 55, 71, 75, 82, 84, 89, 94, 98, 99, 104, 109, 127, 140, 144, 151, 166], "suitabl": [5, 8, 16, 18, 19, 22, 48, 52, 55, 73, 77, 103, 114, 140, 143, 158, 164], "To": [5, 6, 13, 14, 18, 19, 20, 24, 27, 30, 31, 38, 39, 40, 41, 42, 43, 47, 50, 53, 55, 56, 59, 66, 69, 70, 71, 75, 76, 77, 82, 84, 85, 88, 90, 92, 93, 96, 97, 98, 99, 100, 101, 104, 105, 108, 111, 113, 114, 115, 116, 118, 123, 125, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 139, 143, 146, 148, 149, 153, 162, 168], "date": [5, 17, 30, 43, 51, 55, 58, 59, 66, 82, 158, 165], "across": [5, 115, 125, 162, 164], "ocean": [5, 16, 17, 19, 34, 49, 52, 55, 113, 115, 142, 151, 156, 157, 162], "wai": [5, 6, 13, 16, 19, 28, 30, 36, 38, 39, 41, 42, 47, 49, 55, 57, 58, 61, 62, 63, 65, 66, 82, 84, 85, 86, 88, 91, 93, 94, 99, 101, 103, 105, 108, 110, 111, 113, 114, 119, 125, 126, 127, 130, 137, 138, 140, 142, 147, 148, 155, 159, 162, 167, 169, 170], "target": [5, 62, 82, 89, 101, 130], "possibli": [5, 32, 36, 70, 88, 94, 111, 118, 124, 144], "deep": [5, 49, 70], "amplitud": [5, 125], "compar": [5, 18, 19, 24, 39, 47, 49, 52, 55, 59, 82, 98, 115, 116, 143, 149, 160, 166, 170], "essenti": [5, 57, 71, 104, 151, 162], "rest": [5, 24, 84, 113, 127, 143, 156, 157, 162, 164], "henc": [5, 36, 57, 58, 67, 72, 104, 110, 111, 115, 144], "take": [5, 6, 24, 29, 30, 32, 34, 37, 51, 58, 68, 70, 71, 75, 82, 88, 94, 101, 104, 108, 109, 110, 115, 116, 118, 122, 128, 136, 144, 148, 149, 150, 151, 164, 167, 170], "rpn2_geoclaw_adjoint_qwav": 5, "rpt2_geoclaw_adjoint_qwav": 5, "non": [5, 16, 59, 70, 78, 89, 101, 108, 128, 130, 148, 150, 152, 158, 170], "vector": [5, 24, 88, 92, 98, 106, 127, 135, 140, 141], "split": [5, 6, 76, 94, 97, 104, 123, 124, 132, 148, 149, 150, 152, 161, 167, 170], "flux": [5, 17, 34, 36, 37, 94, 102, 104, 140, 148, 170], "comment": [5, 11, 19, 26, 53, 59, 126, 135, 139], "rpn2": [5, 140], "basic": [6, 10, 12, 27, 32, 38, 40, 48, 61, 70, 71, 88, 94, 96, 97, 98, 102, 104, 116, 140, 141, 158, 170], "strategi": 6, "logic": [6, 16, 17, 34, 132, 151], "rectangular": [6, 7, 16, 17, 32, 34, 37, 41, 42, 48, 50, 63, 70, 94, 115, 127, 130, 135, 149, 151, 162], "too": [6, 19, 51, 55, 58, 59, 118, 124, 142, 150, 152, 154], "portion": [6, 36, 42, 55, 70, 89, 135, 161], "factor": [6, 55, 149, 151, 161, 164], "direct": [6, 8, 16, 24, 32, 34, 36, 38, 39, 47, 49, 51, 55, 59, 63, 65, 66, 71, 75, 76, 82, 86, 91, 101, 108, 115, 126, 140, 148, 149, 151, 164], "anisotrop": [6, 24], "perhap": [6, 12, 19, 34, 42, 47, 58, 82, 106, 109, 115, 142], "section": [6, 13, 16, 36, 38, 39, 42, 44, 49, 50, 52, 58, 59, 67, 71, 81, 84, 96, 116, 132, 139, 148, 151, 164], "cfl": [6, 49, 94, 98, 104, 108, 118, 119, 124, 148, 150, 151, 152], "spatial": [6, 17, 27, 32, 36, 37, 41, 42, 47, 48, 49, 64, 68, 72, 101, 115, 119, 123, 130, 132, 140, 143, 149, 150, 151, 152, 170], "reduc": [6, 16, 36, 42, 49, 55, 118, 124, 126, 135, 170], "thu": [6, 51, 98, 101, 127, 158], "proce": [6, 18, 19, 30, 151], "advanc": [6, 17, 36, 56, 70, 76, 108, 124, 136, 148, 149, 167], "taken": [6, 34, 70, 75, 98, 104, 115, 148, 167], "around": [6, 32, 34, 42, 63, 97, 113, 116, 130, 149, 150, 158, 164, 167], "librari": [6, 13, 15, 16, 18, 19, 22, 24, 27, 29, 30, 34, 36, 38, 39, 44, 47, 49, 56, 63, 66, 76, 77, 78, 86, 92, 97, 99, 104, 109, 111, 112, 115, 125, 130, 144, 145, 149, 156, 157, 165, 167], "bcnamr": [6, 16, 127, 148, 150, 167], "check": [6, 14, 15, 16, 22, 34, 38, 39, 43, 44, 54, 55, 56, 58, 59, 60, 62, 66, 71, 82, 85, 88, 89, 91, 96, 99, 103, 104, 106, 108, 109, 111, 112, 115, 120, 129, 142, 144, 145, 149, 150, 156, 157, 158, 164, 165, 166, 167], "denot": [6, 19, 24, 37, 47, 57, 140, 164], "procedur": [6, 16, 42, 48, 49, 59, 167], "updat": [6, 12, 13, 24, 25, 27, 34, 53, 56, 61, 62, 64, 84, 96, 104, 106, 107, 110, 113, 118, 119, 123, 125, 126, 127, 128, 129, 130, 140, 149, 150, 152, 155, 158, 161, 167], "consist": [6, 27, 34, 36, 51, 55, 59, 63, 99, 110, 125, 135, 136, 140, 142, 151, 162, 167], "replac": [6, 13, 31, 36, 41, 47, 52, 56, 58, 59, 61, 64, 66, 81, 89, 93, 97, 99, 100, 101, 102, 106, 109, 116, 118, 119, 125, 127, 129, 130, 135, 139, 140, 144, 164, 165], "ly": [6, 70], "within": [6, 16, 30, 36, 37, 58, 62, 70, 72, 78, 82, 100, 109, 111, 115, 140, 142, 147, 153, 164], "approxim": [6, 16, 18, 19, 27, 35, 52, 55, 72, 75, 140], "lead": [6, 13, 24, 34, 36, 52, 55, 68, 71, 75, 111, 114, 132, 144, 149], "total": [6, 32, 36, 55, 75, 77, 98, 104, 148, 149, 150, 152, 161], "mass": [6, 98, 118, 154], "restor": 6, "global": [6, 14, 94, 106, 109, 118, 143, 162, 166, 167], "fix": [6, 21, 22, 24, 27, 35, 37, 41, 47, 48, 49, 58, 59, 63, 64, 66, 70, 72, 86, 97, 102, 118, 119, 120, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 141, 148, 150, 152, 164], "up": [6, 13, 19, 24, 30, 31, 32, 34, 36, 38, 39, 42, 43, 47, 48, 55, 58, 59, 63, 66, 70, 71, 75, 77, 82, 88, 89, 91, 93, 95, 96, 97, 99, 104, 105, 108, 111, 113, 115, 116, 118, 123, 124, 127, 130, 132, 137, 142, 144, 147, 150, 152, 161, 162, 165, 166], "style": [6, 24, 30, 32, 36, 41, 53, 55, 70, 73, 82, 86, 91, 127, 151], "olig": [6, 17], "colella": [6, 17], "bergeroliger84": [6, 17], "bergercolella89": [6, 17], "fortran": [6, 9, 11, 13, 14, 19, 22, 25, 29, 30, 32, 34, 35, 36, 37, 38, 47, 48, 50, 57, 60, 62, 66, 67, 68, 72, 76, 77, 78, 81, 84, 86, 88, 89, 91, 94, 96, 97, 99, 101, 102, 104, 105, 106, 109, 111, 118, 123, 124, 125, 127, 128, 129, 135, 136, 140, 141, 146, 149, 150, 151, 152, 158, 160, 161, 162], "written": [6, 11, 27, 32, 34, 36, 37, 43, 47, 62, 63, 64, 65, 75, 77, 78, 82, 86, 95, 96, 97, 101, 125, 140, 148, 149, 150, 151, 152, 158, 164, 167], "ga": [6, 102], "dynam": [6, 22, 32, 36, 52, 75, 78, 149], "merg": [6, 13, 27, 30, 56, 58, 59, 62, 123], "earli": [6, 22, 144], "mjb": [6, 17], "rjl": [6, 17, 111, 129], "fulli": [6, 52, 55, 56, 126, 130, 140, 151, 158, 159], "consid": [6, 42, 52, 62, 70, 89, 111, 146, 153, 164], "adjac": [6, 16, 34, 48, 115, 144, 148], "equival": [6, 47, 56, 57, 63, 64, 77, 129, 135, 162], "copi": [6, 14, 15, 16, 19, 38, 39, 47, 55, 58, 59, 62, 71, 88, 91, 101, 106, 112, 113, 114, 115, 120, 124, 127, 131, 144, 145, 149, 153, 156, 157, 162, 167], "interior": [6, 16, 42, 77, 106], "howev": [6, 13, 16, 18, 19, 24, 34, 38, 39, 42, 44, 49, 50, 52, 55, 62, 65, 67, 70, 72, 75, 76, 77, 86, 89, 96, 115, 116, 125, 127, 129, 143, 144, 147, 151, 161], "lie": [6, 34, 35, 37, 70, 72, 115, 130, 142], "outsid": [6, 16, 41, 63, 70, 130, 142, 144, 162, 164], "li": [6, 16, 34, 37, 72, 115, 142], "along": [6, 14, 16, 19, 26, 29, 32, 34, 42, 47, 55, 58, 61, 75, 77, 111, 115, 118, 123, 138, 139, 142, 144, 151, 166], "unless": [6, 34, 43, 44, 63, 102, 110, 143, 148, 149, 164], "standard": [6, 16, 19, 32, 34, 36, 49, 55, 57, 71, 77, 89, 92, 104, 111, 115, 116, 150, 151, 152, 153, 162, 167, 170], "beyond": [6, 32, 110, 127], "modifi": [6, 9, 14, 15, 16, 18, 19, 22, 24, 29, 34, 38, 39, 42, 47, 48, 58, 59, 62, 64, 66, 71, 74, 82, 89, 92, 94, 96, 101, 111, 112, 113, 114, 115, 122, 124, 125, 126, 127, 132, 142, 144, 145, 148, 150, 151, 152, 156, 157, 162, 164, 167], "damag": [6, 65, 86], "bcn": [6, 16, 152, 167], "nd": [6, 16, 115, 127, 130, 167], "actual": [6, 29, 32, 36, 57, 62, 63, 71, 75, 82, 92, 97, 109, 113, 143, 151], "softwar": [6, 13, 26, 27, 31, 48, 52, 65, 86, 96, 97, 98, 153, 162], "With": [6, 24, 30, 47, 51, 53, 55, 62, 70, 78, 115, 124, 140, 142, 148], "opposit": [6, 16, 97], "side": [6, 16, 19, 20, 34, 55, 58, 68, 75, 97, 116, 118, 135, 136, 137, 140, 170], "everi": [6, 12, 30, 34, 36, 47, 64, 66, 67, 77, 88, 91, 93, 97, 98, 106, 115, 116, 118, 125, 126, 140, 144, 146, 148, 150, 152, 158, 162, 164, 167], "few": [6, 12, 13, 19, 24, 28, 30, 31, 39, 49, 52, 58, 70, 71, 89, 104, 108, 110, 115, 116, 130, 143, 160, 162, 167], "coarsest": [6, 19, 36, 55, 77, 119, 139, 148], "revis": [6, 125], "shock": [6, 17, 52, 104, 115], "accord": [6, 57, 97], "criteria": [6, 7, 24, 27, 34, 70, 106], "cluster": [6, 17, 115, 149, 150], "rigoutsi": 6, "bergerrigoutsis91": [6, 17], "nonoverlap": 6, "rectangl": [6, 7, 27, 32, 36, 70, 75, 115, 130, 164], "balanc": [6, 17, 78, 126, 141, 156, 157], "conflict": [6, 30, 62, 66, 71, 107, 111], "goal": 6, "possibl": [6, 13, 24, 28, 30, 32, 34, 36, 37, 47, 49, 51, 52, 55, 64, 65, 66, 75, 82, 86, 94, 97, 99, 100, 104, 109, 111, 115, 140, 142, 143, 148, 149, 162, 166, 167], "minim": [6, 62, 70, 97, 142, 149, 164], "overhead": [6, 76, 115, 161], "cutoff": [6, 150], "control": [6, 7, 25, 27, 34, 36, 44, 47, 58, 62, 64, 71, 77, 84, 87, 92, 94, 96, 97, 98, 99, 101, 115, 125, 130, 141, 151], "fraction": [6, 13, 32, 115, 148, 167, 170], "70": [6, 36, 55], "realli": [6, 72, 116, 167], "At": [6, 13, 29, 30, 36, 38, 39, 42, 70, 99, 104, 108, 110, 115, 130, 148], "present": [6, 26, 63, 72, 94, 97, 102, 103, 104, 109, 153, 154, 167, 170], "previous": [6, 24, 34, 70, 77, 84, 118, 123, 130, 144], "bilinear": [6, 34, 42, 47, 57, 72, 119, 120, 162], "doxygen": [6, 7, 27, 126], "flowchart": [6, 7, 27], "capabl": [7, 12, 19, 24, 34, 36, 47, 52, 56, 64, 70, 78, 89, 96, 119, 124, 125, 127, 128, 129, 130, 131, 135, 136, 164, 166], "block": [7, 32, 35, 42, 63, 75, 77, 78, 88, 97, 106, 109, 116, 167], "structur": [7, 10, 24, 34, 36, 37, 41, 59, 62, 66, 78, 103, 104, 125, 142, 147, 164], "input": [7, 14, 16, 22, 25, 27, 29, 32, 35, 37, 43, 48, 55, 63, 67, 70, 71, 77, 88, 91, 92, 94, 96, 102, 103, 104, 109, 113, 124, 127, 128, 129, 140, 150, 151, 152, 158, 159, 162, 164, 167], "indic": [7, 16, 19, 22, 24, 27, 31, 32, 34, 36, 41, 42, 44, 47, 48, 55, 57, 59, 62, 67, 71, 72, 80, 84, 94, 98, 99, 102, 104, 108, 111, 115, 116, 125, 130, 132, 140, 141, 148, 149, 150, 151, 152, 154, 162, 164, 167], "tool": [7, 8, 17, 24, 25, 30, 32, 34, 35, 36, 37, 38, 39, 42, 48, 49, 50, 51, 52, 55, 57, 60, 61, 62, 63, 71, 75, 80, 81, 82, 83, 85, 96, 111, 114, 120, 121, 125, 126, 130, 131, 151, 153, 162, 164, 166, 168], "matlab": [7, 24, 27, 38, 39, 80, 81, 82, 100, 110, 118, 127, 130, 131], "deprec": [7, 32, 48, 58, 62, 118, 123, 127, 135, 137, 162, 164], "debug": [7, 18, 44, 66, 77, 81, 98, 106, 111, 116, 135, 148, 150], "flag": [7, 12, 13, 18, 24, 27, 30, 31, 41, 43, 44, 48, 56, 62, 76, 89, 107, 109, 111, 118, 123, 128, 132, 150, 151], "sampl": [7, 8, 14, 17, 18, 27, 31, 36, 44, 47, 48, 51, 55, 64, 75, 111, 116, 135, 139, 142, 148, 149, 162, 164, 167], "ghost": [7, 16, 19, 76, 77, 94, 97, 104, 106, 125, 132, 136, 148, 150, 152, 161, 167, 170], "flagregion": [7, 27, 70, 115, 130, 132, 142, 149, 151], "rule": [7, 13, 27, 63, 70, 89], "convex": [7, 34], "slu": 7, "bounding_box": [7, 35], "mask_outsid": [7, 70], "write": [7, 30, 32, 35, 36, 37, 41, 42, 47, 48, 54, 57, 58, 68, 75, 77, 78, 81, 88, 91, 94, 95, 97, 98, 99, 103, 118, 125, 127, 150, 152, 158, 162, 164], "instanti": [7, 91, 99, 101, 104, 106, 136, 150, 152], "make_kml": 7, "simpl": [7, 31, 38, 39, 41, 48, 59, 72, 75, 89, 96, 101, 102, 104, 109, 114, 116, 164], "select": [7, 12, 13, 15, 16, 30, 34, 42, 70, 97, 98, 104, 112, 115, 119, 126, 130, 138, 145, 148, 151, 156, 157, 166], "continent": [7, 70], "shelf": [7, 70], "guid": [7, 13, 17, 20, 25, 26, 27, 48, 50, 56, 61, 96, 110, 115, 118, 126, 130, 135, 136, 137, 155], "adjoint": [7, 17, 27, 56, 115, 127, 128], "gaug": [7, 27, 34, 36, 48, 49, 63, 72, 94, 95, 106, 113, 119, 123, 124, 125, 126, 127, 130, 135, 139, 143, 147, 150], "extend": [8, 16, 24, 42, 63, 70, 71, 94, 127, 142, 144, 151, 162, 164, 170], "directli": [8, 18, 19, 21, 25, 34, 48, 52, 61, 71, 75, 82, 84, 88, 89, 92, 96, 106, 109, 111, 127, 135, 164, 168], "obviou": [8, 55], "elimin": [8, 24, 70, 89, 111, 127, 151], "gallery_classic_amrclaw": 8, "num_cel": [8, 24, 49, 94, 140, 148, 149, 150, 152], "refinement_ratios_i": [8, 149, 150], "sweep": [8, 140], "transvers": [8, 94, 125, 132, 140, 141, 148, 167, 170], "graph": 9, "understand": [9, 27, 38, 39, 52, 81, 96, 108, 115, 140], "filpatch": [9, 42, 125, 129, 132], "idea": [10, 26, 32, 70, 71, 78, 88, 108, 120, 164, 170], "overal": [10, 88], "who": [10, 12, 21, 24, 26, 34, 44, 52, 60, 118], "gori": 10, "monster": 10, "column": [10, 32, 34, 47, 49, 52, 64, 98, 102, 123, 142, 164], "markup": 11, "languag": [11, 81, 109], "restructur": [11, 58], "text": [11, 58, 59, 63, 77, 91, 97, 104, 123], "sphinx": [11, 25, 27, 59, 126], "covert": 11, "convert_readm": 11, "brows": [11, 26, 45, 55, 71, 153, 167], "insert": [11, 16, 75, 97, 118, 146], "script": [11, 21, 22, 30, 32, 34, 36, 43, 47, 55, 58, 66, 71, 78, 81, 86, 89, 93, 95, 96, 98, 99, 104, 109, 111, 116, 127, 131, 140, 147, 151, 152, 164], "invok": [11, 14, 19, 76, 144, 165], "minor": [11, 19, 55, 58, 98, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 130, 132, 134, 136, 137], "syntax": [11, 61, 146], "highlight": [11, 13], "header": [11, 32, 34, 36, 42, 47, 57, 70, 75, 77, 97, 103, 123, 125, 127, 158, 162, 164], "complex": [12, 19, 36, 41, 94], "archiv": [12, 23, 39, 55, 59, 116, 153, 160, 164, 166], "github": [12, 15, 19, 24, 25, 26, 27, 28, 31, 56, 58, 61, 62, 93, 101, 105, 112, 116, 118, 122, 124, 125, 126, 135, 138, 140, 141, 145, 156, 157, 165], "app": [12, 13, 20, 25, 28, 30, 31, 40, 45, 46, 75, 113, 114, 118, 122, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 141], "com": [12, 13, 19, 25, 26, 28, 30, 31, 51, 56, 58, 59, 61, 62, 97, 99, 101, 105, 122, 124, 125, 126, 135, 138, 141], "fvmbook": [12, 17, 45, 46], "galleri": [12, 17, 27, 34, 36, 38, 39, 40, 45, 48, 49, 59, 80, 81, 93, 96, 110, 116, 122, 126, 153, 160, 167], "anim": [12, 16, 36, 45, 49, 55, 123, 130, 131, 135, 153], "instal": [12, 13, 19, 20, 25, 27, 31, 38, 46, 55, 58, 59, 84, 86, 87, 90, 95, 97, 108, 110, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 146, 169], "collect": [12, 27, 28, 30, 32, 34, 75, 81, 88, 104, 153], "either": [12, 16, 19, 22, 32, 34, 36, 42, 48, 50, 55, 64, 66, 70, 71, 75, 77, 82, 84, 88, 94, 96, 97, 98, 104, 109, 111, 115, 116, 123, 124, 125, 127, 135, 140, 142, 144, 149, 151, 158, 162, 164, 167, 170], "clone": [12, 20, 25, 26, 45, 56, 58, 59, 62, 85, 99, 105, 114, 118, 135, 136, 137, 165], "git": [12, 13, 25, 26, 27, 28, 56, 59, 62, 96, 105, 116, 129], "navig": [12, 31, 58, 153], "green": [12, 18, 19, 63, 70, 75, 82, 116, 164], "button": [12, 13, 30, 55, 63, 126], "download": [12, 13, 30, 31, 32, 39, 40, 42, 48, 55, 59, 61, 62, 93, 99, 105, 127, 128, 138, 160, 164, 165, 166], "zip": [12, 55, 59], "illustr": [12, 27, 32, 34, 38, 46, 48, 49, 55, 70, 71, 75, 77, 114, 122, 123, 127, 129, 140, 142, 153, 154, 164], "variou": [12, 19, 22, 24, 32, 36, 41, 46, 52, 58, 71, 72, 75, 82, 84, 94, 108, 110, 111, 115, 125, 140, 147, 151, 154, 158], "visibl": [12, 13, 46, 55, 114, 153], "render": [12, 24, 34, 46, 55, 63, 168], "advantag": [12, 19, 36, 47, 64, 81, 97, 110, 116, 142], "independ": [12, 25, 32, 36, 37], "contact": [12, 93, 96, 105], "u": [12, 13, 16, 26, 31, 34, 36, 37, 51, 52, 59, 60, 62, 64, 86, 93, 96, 102, 105, 106, 107, 108, 113, 126, 140, 149, 152, 158, 166], "storm": [12, 17, 26, 27, 48, 123, 126, 127, 128, 129, 131, 132, 133], "surg": [12, 17, 26, 27, 48, 123, 126, 127, 128, 129, 132, 158], "empti": [12, 36, 47, 103, 106, 109, 111, 118, 148, 151, 158, 164], "gitmodul": 12, "pull": [12, 26, 28, 31, 58, 59, 61, 93, 101, 116, 122, 125, 126, 132, 135, 140], "request": [12, 26, 28, 32, 36, 37, 47, 58, 61, 77, 88, 93, 94, 98, 101, 103, 116, 118, 125, 127, 132, 140, 151, 158, 164], "init": [12, 27, 30, 42, 48, 56, 59, 61, 143, 151], "leav": [12, 13, 16, 47, 62, 149, 164], "off": [12, 13, 47, 52, 55, 63, 71, 84, 91, 98, 115, 135, 149, 164], "won": [12, 13, 70, 89, 164], "hurt": [12, 67], "maintain": [12, 30, 110, 127, 149, 162, 167], "flavor": [12, 23, 97], "demonstr": [12, 27, 93, 99], "agre": [12, 30, 42, 57, 140, 161, 164, 167], "seen": [12, 24, 34, 38, 39, 40, 52, 76, 101, 148, 153], "cloud": 13, "elast": [13, 75], "sign": [13, 26, 82, 132, 158], "account": [13, 26, 30, 59, 90, 99, 139], "750": 13, "free": [13, 55, 66, 75, 86, 90, 101, 105, 107], "micro": 13, "suffici": [13, 16, 18, 19, 22, 36, 47, 75, 76, 77, 113, 119, 135, 148, 151], "tier": 13, "inform": [13, 14, 24, 27, 34, 35, 37, 38, 39, 49, 50, 51, 52, 53, 54, 62, 67, 77, 82, 83, 84, 88, 89, 94, 96, 98, 99, 100, 102, 103, 109, 111, 124, 127, 128, 130, 136, 138, 139, 140, 143, 146, 148, 149, 151, 158, 161, 162, 165, 166, 167, 168], "uw": [13, 26], "escienc": 13, "aw": 13, "tutori": [13, 31, 59, 84, 87, 91, 96, 105, 111, 114], "gear": 13, "faq": [13, 27, 81], "price": 13, "charg": 13, "per": [13, 32, 37, 47, 49, 55, 63, 71, 76, 97, 149], "thereof": 13, "regardless": [13, 37, 42, 70, 115, 148], "cpu": [13, 56, 124, 127, 129, 161], "consol": [13, 98, 151], "tab": [13, 58, 138], "east": [13, 162], "cheaper": 13, "rate": 13, "menu": [13, 20, 27, 58, 63, 118, 126, 135, 136, 137, 138, 143, 166], "imag": [13, 38, 39, 42, 59, 63, 70, 116, 127, 142], "platform": [13, 55, 91, 99, 110, 116], "finish": [13, 82, 88], "load": [13, 63, 98, 100, 103, 109, 116, 164, 168], "databas": [13, 32, 75, 109, 113, 127, 162], "uwamath": 13, "bar": [13, 58, 158], "screen": [13, 30, 55, 63, 91, 98, 99, 124, 150, 152], "shapshot": 13, "machin": [13, 27, 76, 78, 116, 125, 146], "disk": [13, 47, 88, 97, 98, 116, 125], "ubuntu": 13, "linux": [13, 74, 85, 107, 116, 146], "popup": 13, "look": [13, 14, 24, 27, 30, 32, 42, 55, 58, 59, 63, 71, 82, 84, 89, 94, 99, 103, 104, 108, 109, 111, 116, 120, 127, 136, 142, 148, 149, 151, 161, 164, 165], "sort": [13, 42, 127, 147, 165], "larger": [13, 22, 34, 49, 55, 63, 75, 76, 77, 82, 94, 119, 125, 132, 149, 151, 162], "cost": [13, 104], "continu": [13, 24, 30, 32, 51, 53, 58, 86, 110, 118, 140, 148, 170], "eventu": [13, 48, 130], "don": [13, 29, 30, 58, 59, 82, 97, 98, 99, 105, 116, 150, 165], "pair": [13, 51, 97, 116, 164], "secur": 13, "quick": [13, 27, 39, 48, 50, 60, 85, 116, 160], "close": [13, 42, 55, 58, 63, 70, 71, 97, 115, 118, 130, 149, 158], "back": [13, 29, 31, 58, 59, 126], "statu": [13, 30, 54, 91, 108], "wait": 13, "until": [13, 34, 64, 70, 137, 144], "refresh": [13, 47], "bottom": [13, 15, 19, 32, 38, 39, 48, 52, 68, 70, 75, 88, 101, 102, 125, 126, 145, 156, 157], "scroll": 13, "down": [13, 32, 98, 124, 158, 162, 164], "dn": 13, "screenshot": [13, 55], "rjlkei": 13, "pem": 13, "abl": [13, 58, 111], "ssh": [13, 30], "keypair": 13, "50": [13, 17, 34, 51, 55, 72, 104, 120, 150], "19": [13, 17, 26, 133, 134, 138, 161], "75": [13, 17, 92, 108, 142], "229": 13, "amazonaw": 13, "gfortran": [13, 62, 76, 85, 87, 107, 118, 146, 165], "ipython": [13, 78, 82, 84, 89, 90, 96, 98, 105, 108, 111, 123, 124], "scipi": [13, 37, 89, 110, 137, 158, 164], "netcdf": [13, 37, 44, 48, 124, 127, 129, 131, 158, 164, 166], "apach": 13, "server": [13, 31, 42, 55, 58, 59, 70, 127, 162, 166], "apt": [13, 85], "fetch": [13, 51], "bring": [13, 55, 58, 71, 151], "master": [13, 15, 27, 31, 58, 59, 62, 101, 112, 118, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 141, 145, 156, 157], "make_lib": 13, "compil": [13, 18, 19, 27, 38, 39, 43, 50, 62, 67, 76, 78, 84, 85, 89, 96, 97, 101, 105, 109, 118, 119, 140, 141, 146], "bashrc": [13, 44, 107, 146], "Of": [13, 28, 75, 108, 113, 162], "cours": [13, 28, 34, 47, 50, 64, 75, 99, 100, 108, 110, 113, 151, 162], "tar": [13, 129, 138], "instruct": [13, 19, 20, 26, 27, 38, 39, 42, 55, 56, 58, 59, 88, 90, 96, 99, 105, 108, 111, 118, 126, 133, 135, 136, 137, 138, 139, 165], "window": [13, 32, 71, 84, 146], "respons": [13, 52, 88, 103], "pretti": 13, "slow": [13, 55, 98, 107], "_plot": [13, 38, 39, 47, 71, 84, 118, 147, 153], "local": [13, 17, 19, 22, 27, 30, 55, 58, 63, 66, 67, 71, 92, 94, 101, 106, 125, 127, 136, 144, 162, 164, 167], "sftp": 13, "much": [13, 19, 30, 34, 36, 44, 49, 55, 77, 78, 81, 85, 110, 115, 119, 123, 130, 135, 136, 142, 148, 151, 161, 164], "smaller": [13, 36, 55, 68, 78, 94, 98, 119, 135, 144, 148, 150, 151, 152, 164], "quicker": [13, 142], "browser": [13, 30, 31, 38, 39, 55, 58, 153], "explain": [13, 19, 34, 52, 70, 132, 148, 153], "webserv": 13, "inbound": 13, "port": [13, 31, 95, 96, 101, 149], "22": [13, 26, 149, 164], "80": [13, 17, 55, 99, 142], "drop": [13, 18, 19, 58, 85, 130, 132, 144, 148], "tcp": 13, "Then": [13, 16, 30, 31, 32, 36, 47, 58, 59, 60, 67, 70, 75, 76, 84, 88, 91, 99, 105, 106, 107, 111, 118, 140, 142, 164, 165], "someth": [13, 29, 30, 58, 66, 74, 81, 98, 103, 104, 111, 118, 162, 165, 167], "shot": 13, "ln": 13, "expos": [13, 78], "home": [13, 31, 32, 62, 146], "scp": 13, "TO": [13, 65, 86], "send": [13, 26, 101, 140], "remot": [13, 55, 59, 127, 164, 166], "rel": [13, 18, 19, 22, 32, 43, 50, 52, 55, 75, 76, 82, 96, 109, 111, 116, 118, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 143, 149, 151, 153, 162, 166], "end": [13, 31, 32, 34, 35, 36, 47, 51, 55, 59, 63, 91, 98, 102, 108, 110, 113, 115, 118, 124, 125, 127, 139, 141, 142, 150, 152, 158, 161], "retriev": [13, 37, 51, 84, 89, 104, 164, 166], "sit": 13, "idl": 13, "action": [13, 14, 89], "restart": [13, 27, 47, 77, 84, 96, 118, 124, 125, 126, 127, 129, 132, 136, 148, 150, 152], "later": [13, 36, 37, 42, 54, 55, 62, 84, 104, 139], "But": [13, 19, 34, 42, 55, 72, 82, 107, 120, 127, 144, 146], "futur": [13, 24, 27, 28, 38, 39, 42, 49, 52, 57, 63, 68, 88, 104, 110, 124, 125, 127, 130, 136, 149, 158, 162], "job": [13, 134], "eb": 13, "runclaw": [14, 54, 118, 120, 129, 131, 137, 140], "autom": [14, 58, 89, 116], "certain": [14, 34, 48, 61, 70, 98, 115, 124, 142, 148], "keep": [14, 27, 30, 34, 35, 37, 38, 39, 76, 88, 91, 96, 106, 109, 116, 120], "log": [14, 27, 30, 31, 94, 95, 96, 103, 104], "came": 14, "rundir": [14, 91], "environ": [14, 18, 19, 27, 30, 38, 39, 40, 43, 54, 55, 58, 61, 62, 71, 74, 76, 78, 100, 107, 109, 111, 125, 164, 165], "noth": [15, 64, 106, 128, 145, 156, 157, 164, 167], "rememb": [15, 29, 76, 82, 99, 145, 156, 157], "b4step1": [15, 67, 167], "b4step2": [15, 145, 167], "b4step3": 15, "branch": [15, 20, 27, 31, 44, 54, 56, 59, 61, 62, 112, 116, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 145, 156, 157], "tag": [15, 55, 59, 61, 112, 145, 149, 150, 156, 157], "bathymetri": [15, 48, 52, 55, 63, 102, 113, 125, 127, 141, 143, 145, 151, 162, 164], "area": [15, 24, 48, 104, 113, 125, 144, 145], "dy": [15, 51, 57, 63, 64, 77, 89, 94, 98, 123, 127, 145, 162, 164], "capac": [15, 102, 145, 148, 149, 150, 152], "length": [15, 32, 37, 49, 52, 63, 75, 101, 106, 125, 132, 145, 148, 149, 150, 151, 167], "latter": [15, 18, 47, 70, 72, 101, 130, 142, 145, 148, 158, 167], "quantiti": [15, 18, 19, 34, 37, 63, 71, 72, 91, 95, 96, 102, 106, 141, 145, 151], "coordinate_system": [15, 18, 49, 64, 145, 151], "impos": [16, 89, 115, 156, 157, 170], "chapter": [16, 140, 148, 167], "choic": [16, 48, 81, 104, 148, 150, 151, 152, 167], "bc_lower": [16, 88, 101, 108, 148, 150, 152], "bc_upper": [16, 88, 101, 108, 148, 150, 152], "extrap": [16, 101, 108, 148, 150], "outflow": [16, 148, 150, 152], "move": [16, 34, 38, 39, 48, 58, 62, 64, 75, 101, 115, 119, 121, 126, 151, 154, 162, 163], "normal": [16, 19, 35, 36, 56, 58, 64, 82, 101, 111, 140, 141, 148, 149, 150, 151, 152], "fairli": [16, 52, 125], "good": [16, 19, 30, 52, 55, 65, 76, 86, 108, 113, 116, 125, 132, 140], "outgo": 16, "let": [16, 48, 62, 86, 113, 126, 132, 140], "without": [16, 24, 35, 43, 47, 52, 63, 65, 66, 67, 70, 71, 82, 84, 86, 92, 96, 97, 98, 109, 111, 116, 136, 142, 146, 150, 152, 158, 165, 167], "particularli": [16, 19, 29, 31, 34, 36, 54, 55, 60, 61, 62, 75, 77, 111, 120, 123, 127, 132, 136, 144, 162], "perfect": 16, "hit": [16, 17, 36, 71, 77, 84, 98, 148], "obliqu": 16, "perfectli": 16, "wall": [16, 44, 101, 108, 124, 127, 129, 148, 150, 152, 161], "veloc": [16, 34, 36, 51, 64, 71, 84, 101, 102, 108, 125, 135, 143, 148, 149, 150, 151, 152, 167], "momentum": [16, 18, 34, 36, 37, 52, 64, 68, 98, 132, 141, 151, 154, 162], "third": [16, 18, 19, 34, 57, 92, 161, 164], "acoust": [16, 31, 38, 39, 52, 87, 88, 91, 93, 96, 104, 105, 123, 140, 150, 167], "p": [16, 17, 31, 84, 86, 88, 94, 97, 98, 102, 106, 118, 140, 170], "hu": [16, 18, 19, 36, 37, 64, 68, 102, 141, 151], "hv": [16, 19, 36, 37, 64, 68, 141, 151], "equal": [16, 19, 32, 34, 35, 36, 37, 49, 51, 55, 72, 75, 77, 99, 101, 115, 139, 142, 148, 150, 152, 162, 164], "far": [16, 18, 19, 41, 45, 70, 81, 128, 130, 132, 135], "symmetri": [16, 49], "physic": [16, 19, 47, 49, 55, 89, 94, 96, 108, 115, 170], "slightli": [16, 19, 42, 57, 125, 126, 132, 142], "complic": [16, 82, 89, 142, 147], "alwai": [16, 19, 24, 28, 29, 30, 34, 36, 37, 44, 57, 58, 62, 71, 88, 97, 114, 115, 119, 120, 132, 136, 144, 148, 150, 152, 162, 167], "alon": [16, 55], "topographi": [16, 17, 19, 27, 34, 35, 36, 37, 47, 48, 49, 52, 57, 63, 68, 72, 75, 83, 113, 114, 118, 119, 120, 121, 123, 124, 127, 130, 133, 136, 142, 143, 144, 156, 157, 163], "artifici": [16, 144], "ignor": [16, 49, 55, 63, 97, 123, 132, 143, 164], "incom": 16, "truncat": [16, 36, 77, 97, 148], "spuriou": [16, 34, 116], "extropl": 16, "dry": [16, 17, 27, 34, 48, 102, 130, 133, 141, 144], "land": [16, 42, 48, 50, 55, 58, 59, 63, 70, 72, 83, 130, 144, 151, 164], "tank": [16, 49, 52], "bc2amr": [16, 127], "calhounhelzellevequ": 16, "envis": 16, "fold": 16, "piec": [16, 52, 94], "glu": 16, "inflat": 16, "websit": [16, 55, 58, 97, 153, 164], "bergercalhounhelzellevequ": 16, "hint": [16, 27, 48, 81, 84, 111, 151, 165], "suppos": [16, 67, 70, 71, 82, 111, 115], "bit": [16, 24, 32, 59, 97, 99, 107, 141], "examin": [16, 38, 39, 47, 70, 111, 135], "own": [16, 22, 26, 30, 36, 62, 88, 89, 95, 96, 105, 106, 113, 115, 127, 140, 153], "todo": [16, 140, 158, 164, 170], "poster": 17, "resourc": [17, 26, 30, 50, 110], "bale": 17, "rossmanith": 17, "siam": [17, 26, 27, 96, 140], "sci": 17, "24": [17, 55, 72, 142], "2002": 17, "955": [17, 142], "978": 17, "author": [17, 27, 48, 52, 92, 96, 97, 102, 114], "1989": 17, "hydrodynam": 17, "phy": 17, "82": 17, "64": [17, 94, 97, 99, 107], "84": [17, 55], "34": [17, 55, 63, 96], "2011": [17, 26, 86], "pp": 17, "1195": 17, "1206": 17, "adv": 17, "awr11": 17, "1998": 17, "anal": 17, "35": [17, 34, 57, 75, 96], "2298": 17, "2316": 17, "bergerleveque2023": [17, 18, 19, 49], "2023": [17, 20, 45, 118, 136, 137, 138], "implicit": [17, 19, 86, 104], "dispers": [17, 18, 48, 49, 52], "submit": 17, "1984": 17, "partial": [17, 78, 113], "differenti": [17, 32], "53": 17, "484": 17, "512": 17, "rigoutso": 17, "1991": 17, "ieee": 17, "tran": 17, "sy": [17, 42, 70, 91, 150, 152], "man": [17, 27, 48, 52, 151, 156, 157], "cyber": 17, "21": [17, 71, 92, 94, 123, 124, 138], "1278": 17, "1286": 17, "2018": [17, 26, 58, 127, 128, 138], "phd": 17, "thesi": [17, 104], "pure": [17, 56, 84, 94, 96, 97, 99, 104, 116, 141], "appl": 17, "geophi": 17, "173": 17, "4055": 17, "4074": 17, "info": [17, 31, 32, 35, 36, 37, 47, 59, 63, 71, 91, 94, 97, 98, 104, 125, 135, 149, 150, 158], "analysi": 17, "evalu": [17, 29, 32, 36, 37, 68, 72, 88, 94, 104, 164, 167], "preprint": 17, "2000": [17, 57, 162, 164], "165": [17, 161], "126": [17, 164], "166": 17, "leveque96": 17, "1996": 17, "advect": [17, 82, 96, 99, 140, 141, 152, 167], "incompress": 17, "leveque1996": 17, "33": [17, 94, 142], "627": 17, "665": 17, "1997": [17, 96], "multi": [17, 55, 88, 119, 121, 124, 127, 167], "131": [17, 96], "327": [17, 96], "353": [17, 96], "wpalg": 17, "cambridg": 17, "press": [17, 99, 105], "uk": [17, 32], "fvmhp_materi": 17, "acta": 17, "numerica": 17, "211": 17, "289": 17, "dg": 17, "actanum2011": 17, "techniqu": [17, 28], "2013": [17, 26, 96], "a351": [17, 96], "a377": [17, 96], "manuel": [17, 86, 96], "quezada": [17, 86, 96], "luna": [17, 86, 96], "matthew": [17, 86, 96], "kneplei": [17, 86, 96], "emmett": [17, 86, 96], "2012": [17, 24, 26, 52, 96], "scalabl": [17, 96], "c210": [17, 96], "c231": [17, 96], "sisc": [17, 96], "month": [17, 55, 96], "nov": [17, 96], "kimetal2017": [17, 19], "kim": [17, 19], "pedersen": 17, "lovholt": 17, "boussinesq": [17, 27, 48, 49, 52, 118, 137], "studi": [17, 19, 52, 68], "break": [17, 18, 30, 32, 48, 52, 55, 63, 75, 116, 124, 144, 151, 164], "phenomena": [17, 19], "long": [17, 18, 19, 30, 32, 49, 51, 52, 55, 63, 74, 96, 124, 132, 149, 164], "coastal": [17, 52, 130, 143, 144, 151, 162], "engin": [17, 55], "122": [17, 42, 70, 142, 164], "2017": [17, 26, 59, 102, 125, 126, 127, 138], "86": 17, "1016": 17, "coastaleng": 17, "005": 17, "kim201775": 17, "jihwan": [17, 19], "geir": 17, "finn": 17, "vholt": 17, "mandlietal2016": 17, "googl": [17, 26, 27, 30, 42, 48, 51, 63, 70, 93, 97, 99, 107, 123, 125, 133, 140, 142], "scholar": 17, "hundr": [17, 36], "calhellev08": 17, "helzel": 17, "circular": 17, "spheric": [17, 49, 55, 118, 137], "review": [17, 92], "2008": [17, 86, 92, 102], "723": 17, "752": 17, "leveque09": 17, "reproduc": [17, 57, 65, 86], "cise": 17, "11": [17, 34, 82, 102, 131, 132, 138], "2009": [17, 92, 97, 102], "27": [17, 55, 63, 72, 142], "levyon03": 17, "darryl": 17, "yong": 17, "solitari": 17, "layer": [17, 27, 47, 63, 94, 119, 121, 124, 125, 127], "media": 17, "math": [17, 51, 55, 108], "63": [17, 142], "2003": 17, "1539": 17, "1560": 17, "mandli13a": 17, "72": [17, 55, 75], "91": 17, "2013it": 17, "aug": [17, 128], "mandli13b": 17, "dawson": 17, "36": [17, 51, 77, 94], "2014": [17, 26, 102, 117, 119, 120, 121, 122, 123, 138], "clint": 17, "okada85": [17, 32, 75], "okada": [17, 27, 32, 48, 49, 114, 162, 166], "deform": [17, 32, 35, 37, 48, 75, 166], "due": [17, 26, 32, 42, 51, 75, 116, 126, 127, 132, 144, 154, 165], "shear": [17, 32], "tensil": 17, "fault": [17, 27, 32, 48, 49, 114, 127, 134, 162, 166], "bull": [17, 32], "seism": [17, 32], "soc": [17, 32], "am": [17, 32], "1985": [17, 32], "1135": 17, "1154": 17, "repositori": [18, 19, 24, 26, 27, 28, 31, 39, 40, 45, 46, 48, 49, 56, 61, 62, 66, 67, 96, 104, 111, 113, 114, 116, 122, 125, 138, 155], "literatur": [18, 19, 52, 140], "situat": [18, 19, 49, 55, 70, 71, 132], "wavelength": [18, 19, 49, 52], "fluid": [18, 19, 34, 36, 49, 52, 64, 72, 118, 143], "swe": [18, 48], "deriv": [18, 19, 65, 75, 86, 91, 95, 96, 106, 116], "longer": [18, 19, 22, 30, 47, 58, 59, 63, 85, 110, 125, 127, 130, 132, 136, 137, 139, 140, 151, 162, 166], "respect": [18, 32, 34, 49, 55, 63, 96, 97, 102, 164], "txx": 18, "altern": [18, 19, 32, 35, 36, 38, 39, 47, 48, 51, 55, 60, 66, 71, 81, 96, 99, 111, 115, 118, 123, 124, 125], "ellipt": [18, 19], "involv": [18, 19, 26, 101, 104, 113, 154, 159], "xx": [18, 118, 138], "tridiagon": 18, "sgn": [18, 48], "serr": [18, 19], "naghdi": [18, 19], "madsen": [18, 48], "sorensen": [18, 48], "properti": [18, 32, 37, 49, 64, 71, 88, 91, 94, 103, 106, 164], "less": [18, 19, 42, 52, 55, 64, 68, 76, 104, 115, 116, 132, 148], "stabl": [18, 19, 85, 94, 132], "plane": [18, 32, 49, 75, 124, 142, 166], "planar": [18, 49, 75, 140, 141], "axisymmetr": [18, 49], "sphere": [18, 27, 32, 48, 49, 51, 89, 118, 120, 136, 137, 141, 151], "topo": [18, 27, 34, 35, 42, 48, 49, 52, 55, 57, 63, 70, 72, 83, 111, 118, 119, 121, 127, 129, 132, 136, 143, 151, 162, 164], "dtopo": [18, 27, 32, 35, 48, 52, 57, 63, 75, 111, 119, 121, 122, 130, 132, 144, 151, 162, 164, 166], "ident": [18, 42, 67, 94, 97, 99, 116, 164], "bouss_": 18, "templat": [18, 89], "bouss": [18, 19, 49, 118], "lapack": [18, 19, 118, 119], "fflag": [18, 19, 30, 43, 66, 76, 89, 109, 162], "llapack": [18, 107], "lbla": [18, 107], "explicit": [18, 109, 149], "lapack_tridiag": 18, "soubroutin": 18, "bla": [18, 19, 118], "bouss_wavetank_matsuyama": 18, "openmp": [18, 24, 27, 44, 78, 109, 115, 124, 130, 161], "somewher": [18, 19, 123], "boussdata1d": 18, "add_data": [18, 19], "bouss_data": [18, 19], "deepbouss": 18, "switch": [18, 31, 48, 55, 62, 101, 111, 116, 118, 126, 143, 166], "bouss_equ": [18, 19], "alpha": [18, 19, 55, 59, 104], "153": [18, 19], "hardwir": [18, 19, 76], "bouss_modul": [18, 19], "tip": [18, 19, 26, 48, 62, 81, 95, 96, 101, 110], "similarli": [18, 36, 43, 56, 93, 99, 101, 142, 161], "bparam": [18, 19], "15": [18, 19, 34, 42, 57, 59, 63, 70, 75, 94, 142, 150, 161, 164], "caus": [18, 19, 24, 36, 52, 55, 58, 65, 66, 72, 78, 84, 86, 107, 116, 124, 125, 126, 128, 132, 147, 149, 162, 164], "revert": [18, 19, 55], "nondispers": [18, 19], "bouss_min_depth": [18, 19], "criterion": [18, 19, 34, 115, 150], "onshor": [18, 19, 34, 49, 63, 68, 70, 142, 144], "nearest": [18, 19, 37, 42, 47, 164], "omit": [18, 19, 62, 116, 118, 125, 139, 151], "unknown": [18, 19, 32, 106], "inund": [18, 19, 34, 48, 49, 55, 68, 115, 130, 143, 166], "shore": [18, 19, 36, 42, 48, 115, 130, 144], "simplest": [18, 19, 62, 74, 108], "known": [19, 34, 44, 71, 75, 76, 82, 105, 107, 116, 126, 148], "landslid": [19, 52], "realist": [19, 55], "test": [19, 24, 27, 32, 38, 41, 44, 54, 55, 59, 60, 61, 62, 68, 81, 86, 87, 89, 95, 96, 102, 109, 110, 115, 120, 124, 125, 126, 127, 130, 132, 136, 140, 152, 158, 161, 162, 164], "One": [19, 25, 27, 28, 32, 34, 47, 48, 55, 58, 64, 70, 71, 72, 89, 109, 115, 118, 123, 164], "momenta": [19, 64], "effici": [19, 52, 56, 86, 96, 97, 98, 106, 115, 142, 149], "consider": [19, 52, 88], "oper": [19, 53, 116, 125], "spars": [19, 118], "huc": 19, "hvc": 19, "expand": [19, 28, 42, 55, 63], "petsc": [19, 24, 25, 78, 86, 88, 95, 98, 105, 106, 107, 109, 118], "mpi": [19, 78, 99, 118], "prerequesit": 19, "simplic": 19, "practic": [19, 30, 111, 113, 154], "variant": [19, 22, 60, 109, 116, 118], "tune": [19, 28, 149], "match": [19, 32, 36, 41, 55, 63, 97, 103, 116, 158, 164], "airi": 19, "theori": [19, 65, 86, 170], "incorpor": [19, 24, 52, 58, 86, 104, 119, 126, 141, 164], "bonneton": 19, "et": 19, "al": 19, "histor": [19, 52, 75, 166], "boussclaw": 19, "successfulli": [19, 66, 103], "reveal": [19, 47, 108], "stabil": [19, 104, 132, 148], "report": [19, 26, 32, 34, 54, 111, 116, 124, 127, 146, 148, 150], "except": [19, 24, 29, 32, 42, 49, 97, 102, 109, 130, 137, 148, 151, 158, 162], "investig": [19, 116], "radial_flat": 19, "num_eqn": [19, 77, 88, 89, 92, 97, 99, 101, 102, 103, 106, 108, 140, 148, 150, 152, 167], "facilit": [19, 47, 64, 96, 116, 123, 125, 130, 136, 153, 158], "boussdata": 19, "bouss_min_level": 19, "bouss_max_level": 19, "bouss_solv": 19, "bouss_tstart": 19, "avoid": [19, 42, 55, 58, 63, 66, 71, 94, 98, 115, 118, 119, 120, 124, 125, 132, 134, 139, 148, 151, 170], "altogeth": 19, "neighborhood": 19, "recogn": [19, 50, 57, 62, 162], "extrem": [19, 55, 107], "motion": [19, 75, 162], "did": [19, 127, 132, 142, 162], "petsc_dir": [19, 99], "petsc_arch": [19, 99], "shell": [19, 30, 61, 62, 76, 82, 84, 99, 105, 108, 111, 125, 146], "dhave_petsc": 19, "petsc_opt": 19, "options_fil": 19, "petscmpiopt": 19, "adequ": [19, 52], "briefli": [19, 170], "gmre": 19, "krylov": 19, "algebra": 19, "multigrid": 19, "precondition": 19, "manualpag": 19, "ksp": 19, "kspsetfromopt": 19, "pc": 19, "pcsetfromopt": 19, "ex": [19, 38, 39, 91, 118], "xgeoclaw": 19, "runex": [19, 118], "bin": [19, 47, 99, 139], "mpiexec": [19, 99], "word": [19, 98, 127, 158], "process": [19, 27, 36, 38, 39, 48, 55, 56, 75, 88, 93, 94, 99, 105, 106, 109, 116, 118, 125, 135, 137, 148, 165], "incorrectli": [19, 124], "configur": [19, 82, 88, 99, 164], "environment": 19, "implicitamr": 19, "accompani": [19, 20, 23, 118, 135, 136, 137], "novemb": [20, 118, 124, 125, 137, 138], "featur": [20, 24, 27, 30, 34, 42, 55, 58, 71, 82, 89, 115, 116, 118, 122, 124, 125, 127, 132, 135, 136, 137, 138, 158, 162], "dev": [20, 26, 30, 58, 59, 99, 118, 127, 128, 133, 134, 135, 136, 137, 138], "diff": [20, 54, 59, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "tarfil": [20, 59, 62, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "pip": [20, 27, 30, 55, 59, 60, 90, 96, 99, 105, 107, 111, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 146], "doc": [20, 25, 26, 30, 32, 55, 59, 92, 109, 110, 111, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 155], "docker": [20, 27, 59, 60, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 169], "migrat": 21, "intermedi": [21, 34, 37, 75, 139, 167], "easiest": [21, 30, 44, 78, 82, 84, 115, 167], "bulk": [21, 88, 102, 108, 140, 150, 167], "convers": [21, 27, 89, 97, 115, 142, 162, 166], "convert43to46": 21, "inspect": [21, 22, 55], "broken": [21, 22, 30, 75, 116], "renam": [22, 24, 38, 39, 66, 101, 104], "achiev": [22, 89, 156, 157], "convert46to50": 22, "_4": 22, "complet": [22, 24, 30, 51, 66, 84, 88, 89, 99, 109, 116, 137], "delet": [22, 30, 58, 62, 137], "combin": [22, 58, 63, 124, 166], "properli": [22, 34, 38, 39, 42, 43, 52, 55, 57, 58, 62, 63, 70, 74, 77, 91, 116, 119, 122, 127, 130, 132, 146, 148, 151, 154, 162, 164, 165, 167], "permut": 22, "th": [22, 24, 47, 140, 167], "reorder": [22, 24], "pattern": [22, 50, 55, 143], "carefulli": [22, 24, 68], "setaux": [22, 24, 67, 89, 119, 120, 140, 148, 150, 152], "sequenc": [22, 24, 36, 37, 67, 70, 72, 99, 105, 108, 109, 116, 119, 126, 140, 167], "maxmx": [22, 89], "maxmi": [22, 89], "maxmz": 22, "declar": [22, 24, 106, 132, 167], "memori": [22, 24, 76, 77, 78, 88, 91, 98, 106, 132, 149, 150], "alloc": [22, 104, 123, 132, 149], "mx": [22, 24, 49, 57, 77, 89, 99, 102, 140, 150, 162, 167], "resp": [22, 32, 132], "mz": [22, 24], "driver": [22, 67], "led": [22, 128], "homepag": [23, 27], "reorgan": [24, 89, 117, 133], "changelog": [24, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 138], "concern": [24, 48, 149], "evolv": [24, 88, 91, 104], "organ": [24, 25, 38, 39, 91], "affect": [24, 66, 125, 126, 132, 135, 137, 148, 162, 165], "assist": [24, 130], "older": [24, 44, 56, 58, 61, 62, 104, 118, 131, 135, 138, 149], "compris": [24, 96, 164], "webpag": [24, 26, 38, 39, 45, 50, 55, 59, 66, 128, 143], "primari": [24, 30, 31, 48, 113, 116, 158], "auxiliari": [24, 89, 91, 97, 102, 103, 104, 106, 140, 148, 150, 152, 167], "cach": [24, 51, 59, 84, 86, 130, 149], "stride": [24, 164], "contingu": 24, "maux": [24, 140, 167], "ma": [24, 36, 42, 70, 142, 164], "relev": [24, 29, 42, 44, 48, 55, 58, 97, 115, 116, 158], "flexibl": [24, 32, 63, 89, 123, 126, 140, 142, 149], "clean": [24, 58, 59, 109, 118, 123, 127, 137], "systemat": 24, "obscur": 24, "clarifi": 24, "regress": [24, 27, 30, 54, 96, 99, 125, 126, 160], "travi": [24, 132], "miss": [24, 27, 97, 118, 129, 136, 137, 154, 158, 162, 164, 165], "conform": [24, 30, 35, 103, 127, 162], "construct": [24, 32, 34, 57, 72, 88, 94, 109, 136, 158, 159, 162], "visit": [24, 27, 81, 138], "gui": [24, 168], "monitor": [24, 27, 35, 36, 41, 48, 70, 72, 76, 120, 122, 125, 135], "arriv": [24, 34, 36, 42, 48, 125, 143, 144], "fgmax": [24, 27, 36, 41, 48, 63, 72, 76, 120, 122, 125, 126, 130, 131, 135, 136, 137, 151], "ndim": [24, 77, 84, 148, 149], "num_dim": [24, 41, 94, 97, 101, 148, 149, 150, 152], "zlower": 24, "yupper": [24, 150, 164], "zupper": 24, "upper": [24, 34, 35, 41, 49, 92, 94, 101, 142, 148, 150, 152, 162, 164], "mxnest": 24, "neg": [24, 42, 144, 151, 162, 164], "ins": 24, "forc": [24, 27, 43, 48, 66, 70, 109, 115, 130, 141, 144, 149, 159, 164, 165], "prohibit": 24, "again": [24, 43, 66, 70, 75, 82, 84, 88, 89, 98, 102, 107, 111, 127, 133, 162, 165], "2d_grid": 24, "attirbut": 24, "gridlines_show": 24, "grideges_show": 24, "openli": 25, "super": [25, 30, 127, 164], "util": [25, 27, 30, 37, 48, 55, 77, 81, 84, 96, 111, 116, 118, 147, 163, 164, 165], "graphic": [25, 30, 56, 71, 81, 135], "visual": [25, 26, 30, 36, 38, 39, 47, 48, 61, 62, 71, 77, 78, 81, 96, 100, 101, 111, 118, 123, 130, 168], "web": [25, 27, 30, 38, 39, 55, 58, 59, 127, 153, 164], "latest": [25, 27, 46, 55, 58, 59, 61, 62, 90, 99, 105, 118, 120, 124], "legaci": [25, 59, 62], "welcom": [26, 86], "answer": 26, "question": [26, 30, 51, 103], "slack": 26, "channel": [26, 45], "workspac": [26, 71, 106], "join": [26, 82], "experi": [26, 52, 104, 137, 154], "warn": [26, 30, 97, 98, 104, 118, 132, 148, 165], "activ": [26, 34, 36, 41, 58, 104, 113, 151], "gitter": 26, "post": [26, 27, 28, 30, 36, 55, 99, 133, 134, 135, 148, 153], "ask": 26, "twitter": 26, "rais": [26, 32, 62, 97, 103, 105, 109, 158, 164], "photo": [26, 27], "ve": [26, 90, 105, 108], "fork": [26, 58, 59], "track": [26, 27, 30, 34, 35, 36, 47, 48, 55, 58, 60, 62, 76, 88, 96, 109, 116, 119, 128, 130, 133, 135, 141, 158], "youtub": [26, 113, 130], "video": [26, 113, 130], "introductori": 26, "webinar": 26, "csdm": 26, "2019": [26, 56, 128, 129, 130, 138], "randi": [26, 32, 92, 94], "plan": [26, 30, 52, 60, 61, 62, 68, 97, 104, 136, 158], "schedul": 26, "annual": 26, "meet": 26, "took": 26, "onlin": [26, 110, 114, 127, 155, 162], "covid": 26, "four": [26, 72, 94, 115, 116], "short": [26, 49, 52, 101, 132], "slide": 26, "tulan": 26, "clifford": 26, "lectur": 26, "april": [26, 130, 131, 138], "minisymposterium": 26, "cse": 26, "confer": 26, "februari": [26, 126, 132, 133, 138], "march": [26, 27, 34, 41, 42, 48, 119, 120, 138, 142], "boulder": 26, "2015": [26, 59, 102, 123, 124, 125, 138], "summari": [26, 27, 45, 59, 127, 148, 149, 150, 151], "tackl": [26, 30], "progress": [26, 30, 104, 113, 118, 123, 162, 164], "held": [26, 52], "zoom": [26, 55], "conjunct": [26, 42, 70, 97, 115], "23": [26, 130, 131, 138, 149], "25": [26, 34, 42, 45, 57, 70, 75, 88, 94], "28": [26, 122, 123, 126, 127, 128, 129, 130, 138], "unives": 26, "colorado": 26, "immedi": [26, 52, 71, 88, 90, 91, 98], "august": [26, 127, 135, 136, 138], "utah": 26, "hpc": 26, "swag": 26, "introduct": 27, "commit": [27, 32, 54, 58, 59, 116], "licens": [27, 48, 52, 96, 114, 127], "cite": [27, 59, 61, 138], "fund": [27, 60, 96], "troubleshoot": [27, 60, 61, 96], "amazon": 27, "servic": [27, 65, 86], "ec2": 27, "ami": 27, "77": [27, 67, 107], "statist": [27, 124], "b4run": [27, 131], "sytl": [27, 36, 81], "checkpoint": [27, 47, 118, 124, 125, 127, 129, 132, 148, 150, 152], "share": [27, 28, 55, 62, 76, 78, 94, 97, 99], "gpu": [27, 129], "cautionari": [27, 48, 67, 151], "registr": [27, 48, 127, 162, 164], "earth": [27, 42, 48, 51, 56, 63, 70, 75, 123, 125, 133, 142, 151], "slip": [27, 32, 48, 49, 114, 162, 166], "sea_level": [27, 34, 42, 48, 52, 63, 102, 130, 144, 151, 162, 164], "eta": [27, 32, 36, 37, 42, 47, 48, 72, 115, 123, 130, 143, 151], "lagrangian": [27, 47, 48, 130], "particl": [27, 36, 47, 48, 130, 135], "friction": [27, 48, 52, 151, 156, 157], "fgout": [27, 34, 47, 48, 63, 72, 135, 137, 151], "nearshor": [27, 34, 36, 47, 48, 52], "front": [27, 34, 41, 42, 48, 71, 103, 109, 142], "geometri": [27, 32, 49, 75, 96, 97, 101, 103, 106, 123], "jupyt": [27, 46, 48, 75, 78, 96, 110, 114, 123, 124, 130, 140], "notebook": [27, 32, 34, 42, 46, 48, 58, 70, 75, 78, 90, 96, 98, 114, 123, 124, 130, 140, 141, 142, 164], "concept": [27, 140], "pointwis": [27, 34, 57, 106, 123, 162], "potenti": [27, 71, 125, 143], "fly": 27, "commun": [27, 55, 86, 106, 109, 111, 115, 127], "hope": [28, 116], "greatli": [28, 36, 86, 118, 135, 143], "submodul": [28, 30, 56, 59, 61], "stai": [28, 34], "annot": [29, 63], "map2d_to_1d": 29, "unavail": 29, "sens": [29, 55, 64, 127, 132, 170], "context": [29, 55, 167], "plotdata": [29, 36, 37, 47, 82, 84, 91, 118, 124, 125, 147], "els": [29, 30, 62, 70, 106, 127, 142, 144, 152], "scalar": [29, 32, 42, 98, 106, 140, 144, 148, 170], "moment": [29, 32, 128], "outn": 29, "outaux": 29, "prepar": 30, "substanti": [30, 58, 86, 123, 129, 132], "incompat": [30, 55], "built": [30, 31, 49, 68, 78, 87, 96, 99, 101, 103, 115, 116, 156, 157], "correctli": [30, 34, 89, 95, 123], "Be": [30, 71, 143, 166], "verbos": [30, 32, 35, 37, 51, 63, 70, 91, 94, 98, 104, 116, 142, 148, 150, 152, 158, 164], "messag": [30, 43, 51, 58, 62, 71, 76, 91, 94, 98, 100, 103, 104, 106, 107, 118, 132, 148, 150, 152, 165], "wise": [30, 104], "especi": [30, 55, 89, 101], "necessit": 30, "modif": [30, 43, 65, 71, 82, 86, 92, 151], "compat": [30, 32, 35, 51, 55, 63, 75, 77, 81, 97, 99, 107, 120, 121, 125, 126, 136, 164], "explan": 30, "tracker": 30, "increasingli": 30, "push": [30, 58, 59], "unlik": [30, 34, 58, 59, 77], "accid": 30, "subrepositori": [30, 59], "oppos": [30, 159], "inter": [30, 126], "proceed": [30, 58], "txt": [30, 34, 47, 54, 59, 64, 86, 98, 118, 125, 126, 127, 139, 158], "isol": [30, 62], "editabl": 30, "site": [30, 55, 62, 111], "pull_al": [30, 59], "sh": [30, 58, 59, 99], "prompt": [30, 31, 71, 82, 84, 93, 96, 108, 164], "shortli": [30, 116], "handi": [30, 66], "uncommit": [30, 54, 59], "checkout": [30, 56, 58, 59, 61], "claw_git_statu": [30, 54, 59, 131], "claw_git_diff": [30, 54, 59], "usernam": [30, 31], "mind": 30, "password": 30, "whenev": [30, 124, 167], "brought": 30, "new_featur": 30, "accident": [30, 82], "recov": [30, 35], "histori": [30, 37, 59, 62, 84], "throw": [30, 137], "awai": [30, 143], "recreat": [30, 43, 66, 130], "rebas": 30, "onto": [30, 32, 55, 144, 164], "newer": [30, 76, 92, 127], "head": [30, 32, 58], "cleaner": [30, 125], "recompil": [30, 43, 44, 66, 76, 109, 118, 130, 149, 167], "nosetest": [30, 39, 40, 99, 105, 116, 160], "fail": [30, 97, 99, 109, 116, 123, 158], "pr": [30, 59, 116, 127], "someon": [30, 66], "propos": [30, 170], "rid": 30, "cross": [30, 49], "poor": 30, "whole": [30, 55, 98, 99], "lot": [30, 42, 118, 130], "doesn": [30, 34, 62, 67, 106], "pep8": 30, "aim": 30, "vim": 30, "nice": [30, 63, 89, 101, 120, 142], "underlin": 30, "nose": [30, 39, 40, 87, 99, 116, 136, 160], "suit": [30, 55, 116], "exactli": [30, 35, 36, 54, 56, 72, 106, 142, 148], "overrid": [30, 44, 55, 88, 89, 109], "bind": [30, 55, 81, 89, 99], "dockerhub": [31, 59], "riemann_book": [31, 141], "0_dockerimag": 31, "8889": 31, "0_contain": 31, "serv": 31, "jovyan": 31, "exit": [31, 82, 99, 105], "ctrl": [31, 82], "quit": [31, 71, 82, 84, 154], "whatev": [31, 88, 103, 140], "ip": [31, 82, 84], "localhost": 31, "token": 31, "wherev": [31, 165], "ones": [31, 88, 89, 106, 127, 148, 149], "ipynb": [31, 32, 34, 42, 75, 114, 124, 141, 142], "chile2010a": [31, 114], "exercis": [31, 48, 114, 116], "transfer": 31, "laptop": [31, 96], "accomplish": [31, 42, 66], "0_geoclaw_dockerimag": 31, "contains": 31, "rm": [31, 58, 59, 66, 165], "1_contain": 31, "rmi": 31, "1_dockerimag": 31, "prune": 31, "dockeril": 31, "root": [31, 62, 97, 98, 103], "dockerfile_v5": 31, "0_geoclaw": 31, "test_bind": 31, "subfault": [32, 48, 127, 128, 166], "seafloor": [32, 52, 75, 144, 166], "rise_tim": [32, 75], "rise": [32, 75, 143, 144], "rise_time_start": [32, 75], "piecewis": [32, 34, 42, 47, 49, 57, 72, 75, 120, 140, 142, 162], "quadrat": [32, 75], "rise_time_end": [32, 75], "rise_fract": [32, 75], "csv": [32, 75, 127], "erron": [32, 75], "dtopotools_exampl": [32, 75, 114], "test_dtopotool": 32, "deal": [32, 52, 81, 98, 99, 106, 158, 164], "sub": [32, 116, 164], "dtopographi": [32, 75], "ucsbfault": [32, 75], "csvfault": [32, 75], "siftfault": [32, 75, 127], "segmentedplanefault": [32, 75], "fault1d": 32, "subfault1d": 32, "dtopography1d": 32, "plot_dz_contour": 32, "plot_dz_color": 32, "mw": [32, 127], "strike_direct": 32, "input_unit": 32, "coordinate_specif": [32, 75], "subclass": 32, "row": [32, 34, 57, 92, 115, 162, 164], "rupture_typ": [32, 75], "static": [32, 75, 127], "dtopo_typ": [32, 35, 49, 63, 75], "repres": [32, 49, 88, 94, 97, 101, 102, 104, 106, 164, 170], "dz_at_t": 32, "dz": [32, 35, 49, 144, 162], "dz_max": 32, "ab": [32, 56, 101, 109, 115, 142, 164], "self": [32, 35, 37, 104, 136, 164], "cmax_dz": 32, "dz_interv": 32, "colorbar_ticks": 32, "colorbar_labels": 32, "fig_kwarg": [32, 164], "appar": [32, 72, 76], "dz_cellave_at_t": 32, "compos": [32, 88], "mo": 32, "seismic": [32, 37, 48, 75], "containing_rect": 32, "create_dtopo_xi": [32, 75], "rect": [32, 142], "016666666666666666": 32, "buffer_s": [32, 75], "buffer": [32, 42, 47, 115, 124, 125, 149, 150, 164], "x1": [32, 34, 35, 36, 41, 51, 63, 89, 98, 115, 142, 149, 150, 151, 164], "x2": [32, 34, 35, 36, 41, 51, 63, 98, 115, 142, 149, 150, 151, 164], "y1": [32, 34, 35, 36, 41, 51, 63, 89, 98, 115, 142, 149, 150, 151, 164], "y2": [32, 34, 35, 36, 41, 51, 63, 98, 115, 142, 149, 150, 151, 164], "create_dtopographi": [32, 75], "valueerror": [32, 158, 164], "plot_subfault": 32, "plot_centerlin": 32, "slip_color": 32, "cmap_slip": 32, "cmin_slip": 32, "cmax_slip": 32, "slip_tim": 32, "plot_rak": 32, "xylim": 32, "plot_box": [32, 164], "axessubplot": 32, "centroid": [32, 75], "dip": [32, 49, 75], "jet": [32, 71], "rake": [32, 75], "drawn": [32, 55, 147], "plot_subfaults_depth": 32, "column_map": 32, "skiprow": 32, "delimit": 32, "dict": [32, 37, 91, 97, 102, 103, 106, 158, 164], "strike": [32, 75], "calculate_geometri": 32, "kinemat": [32, 48], "skip": [32, 130], "width": [32, 36, 49, 55, 63, 75, 77, 94, 101, 106, 115, 142, 150, 152], "rigid": [32, 127], "mu": [32, 127], "set_dynamic_slip": 32, "slip_at_dynamic_t": 32, "column_list": 32, "output_unit": 32, "adopt": [32, 104], "Not": [32, 55, 94, 125, 132], "noaa": [32, 42, 51, 57, 70, 75, 127, 143, 158, 162, 166], "sift": [32, 75, 127], "ucsb": [32, 75, 166], "definit": [32, 71, 88, 115, 122], "gov": [32, 42, 51, 70, 75, 99, 158], "aboutu": 32, "020204mag_polici": 32, "php": [32, 65, 86], "sift_slip": 32, "longitude_shift": 32, "subset": [32, 34, 42, 70, 127, 142, 162, 164, 166], "load_sift_unit_sourc": 32, "pmel": [32, 75], "pub": [32, 158], "gica2937": 32, "although": [32, 55, 67, 71, 100, 101, 103, 115, 128, 134, 164], "notat": [32, 51, 63, 140], "compress": [32, 97, 164], "info_sz": 32, "dat": [32, 158], "acsza1": 32, "acszb1": 32, "set_subfault": 32, "assign": [32, 34, 36, 88, 91, 97, 103], "coodin": 32, "pascal": [32, 158], "centerlin": 32, "respecitv": 32, "mix": [32, 41, 55, 75], "nctr": [32, 75], "upstrik": [32, 75], "updip": [32, 75], "calculate_geometry_triangl": 32, "triangular": [32, 48, 127], "lat": [32, 51, 55, 57, 63, 162, 164], "convert_to_standard_unit": 32, "measur": [32, 47, 49, 51, 75], "dynamic_slip": [32, 128], "rupture_tim": [32, 75], "rise_shap": 32, "gauss_pt": 32, "latitutd": 32, "modulu": [32, 102, 108, 150, 167], "shape": [32, 37, 42, 51, 63, 70, 89, 94, 97, 99, 106, 142, 164], "displac": [32, 36, 48, 49, 52, 75, 144, 151, 166], "1992": 32, "okadamap": 32, "rigin": 32, "dave": 32, "xiaom": 32, "wang": 32, "rewritten": 32, "dicuss": 32, "movement": 32, "sec": 32, "pw": [32, 34], "smooth": [32, 72, 104, 115, 167], "ruptur": [32, 48], "set_corn": 32, "projection_zon": 32, "iter": [32, 42, 70, 102], "1000000": 32, "x0": [32, 51], "orthogon": 32, "subdividedplanefault": 32, "base_subfault": 32, "nstrike": 32, "ndip": 32, "slip_funct": 32, "subdivid": [32, 75], "uniform": [32, 34, 36, 37, 48, 70, 75, 78, 89, 127, 162], "subdivis": 32, "slip_distribut": 32, "xi": [32, 167], "rescal": 32, "tensorproductfault": 32, "fault_plan": 32, "slip_along_strik": 32, "slip_down_dip": 32, "goe": [32, 48, 58], "constant": [32, 34, 36, 49, 52, 63, 68, 72, 99, 102, 140, 141, 142, 144, 151, 164, 167], "tensor": 32, "chen": [32, 166], "ji": [32, 166], "geol": 32, "edu": [32, 55, 97, 129], "faculti": 32, "big_earthquak": 32, "sea": [32, 47, 48, 50, 52, 55, 72, 75, 112, 123, 130, 143, 162, 164, 166], "floor": [32, 48, 75], "durat": [32, 132, 143], "slope": [32, 104, 132], "rf": [32, 58, 59], "bear": [32, 51, 118], "movabl": 32, "latlong": [32, 55], "happen": [33, 55, 66, 88, 103, 106, 130, 165], "filenam": [33, 55, 123, 135, 136, 164], "fgmax_tool": [34, 122, 130, 136, 151], "increment": [34, 47, 55, 94, 109, 148, 150, 152], "record": [34, 45, 47, 64, 106, 138, 158, 166], "observ": [34, 52, 119, 132, 143, 148, 151, 159, 166], "align": [34, 36, 42, 55, 63, 70, 130, 132, 151], "arbitrari": [34, 36, 63, 104, 119, 142, 151], "transect": [34, 51, 63, 118, 151], "coastlin": [34, 55, 70, 72, 130, 142, 151, 166], "quadrilater": [34, 63], "dem": [34, 48, 57, 63, 127, 162, 164, 166], "topo_typ": [34, 42, 49, 57, 63, 70, 123, 124, 127, 130, 162, 164], "point_styl": [34, 35, 70, 122], "fgmax_grid": [34, 35, 63, 130, 136, 151], "junction": 34, "purpos": [34, 36, 48, 52, 57, 65, 71, 77, 86, 94, 114, 116, 139, 142, 148], "maxima": [34, 76], "fgmax_data": [34, 151], "fgmaxgrid": [34, 35, 136, 151], "fgmax0001": 34, "fgno": [34, 35, 36, 37, 136], "sequenti": [34, 36], "fg_maxnum_fgrid": 34, "fgmax_modul": 34, "recomil": 34, "everyth": [34, 59, 62, 76, 99, 108, 109, 116, 127], "fg": 34, "tstart_max": 34, "tend_max": 34, "dt_check": 34, "min_level_check": 34, "arrival_tol": 34, "interp_method": 34, "npt": [34, 51], "xy_fil": 34, "regular": [34, 164], "cartesian": [34, 50, 63, 89, 151], "nx": [34, 36], "ny": [34, 36], "n12": 34, "n23": 34, "x3": [34, 63, 98], "y3": [34, 63, 98], "x4": [34, 63], "y4": [34, 63], "fourth": [34, 57], "perimet": 34, "intersect": [34, 49, 70, 75], "connect": [34, 49, 51, 58, 63, 70, 118, 130, 142], "expect": [34, 72, 102, 108, 109, 110, 116, 127, 128, 130, 132, 150, 151, 152, 158], "topofil": [34, 35, 49, 57, 63, 127, 128, 129, 130, 151, 162, 164], "south": [34, 49, 162], "preprocess": [34, 123], "satisfi": [34, 42, 70, 104, 115, 142, 170], "captur": [34, 47, 52, 64, 142, 162], "posit": [34, 42, 55, 75, 78, 109, 151, 162, 164], "digit": [34, 36, 42, 57, 63, 64, 82, 125, 126, 127, 164], "correspondingli": 34, "1e9": [34, 41, 64], "simul": [34, 38, 39, 40, 42, 50, 52, 55, 71, 72, 91, 94, 96, 98, 99, 101, 105, 108, 113, 125, 126, 127, 129, 142, 144, 158], "exce": [34, 55, 115, 149], "care": [34, 42, 48, 99], "start_max": 34, "natur": [34, 49, 58, 140, 170], "discard": [34, 104], "reiniti": [34, 125], "depress": 34, "margin": [34, 48], "fgmax_valu": 34, "eta_tild": 34, "speed": [34, 36, 37, 49, 88, 92, 102, 108, 118, 125, 130, 140, 141, 148, 151, 158, 159, 164, 167, 170], "harbor": 34, "ship": 34, "ground": [34, 75, 130], "fg_num_val": 34, "num_fgmax_v": [34, 151], "govern": [34, 151], "fgmax_interpol": 34, "fgmax_interpolate0": 34, "fgmax_interp": [34, 132], "unrealist": [34, 72], "island": [34, 42, 70, 142], "65": 34, "amr_levels_max": [34, 115, 149, 150], "8000": 34, "e10": 34, "stop": [34, 76, 82, 118, 119, 127, 150, 152, 164], "20": [34, 42, 53, 55, 57, 63, 70, 79, 82, 102, 115, 149, 150, 151, 162, 164], "const": 34, "fg1": 34, "valuemax": 34, "aux1": 34, "fgmax0002": 34, "explicitli": [34, 67, 71, 96, 132, 148, 165, 170], "dealt": [34, 42], "read_output": [34, 35, 136], "paragraph": 34, "qoi": [34, 37], "2n": 34, "hmin": 34, "13": [34, 47, 161], "99999000e": 34, "99": [34, 150, 152], "never": [34, 72, 101, 106, 112, 115, 130, 142, 148, 150, 152, 165], "met": [34, 65, 86], "make_input_fil": 34, "readm": [34, 36, 58, 59, 130, 140, 146, 167], "chile2010_fgmax": [34, 36, 135], "bound": [35, 37, 89, 92, 99, 136, 142, 148, 164], "interp_dz": 35, "dtopo_path": 35, "b0": [35, 37], "event": [35, 48, 52, 63, 65, 75, 86, 143, 144, 148], "ps4_to_arrai": 35, "mask": [35, 42, 48, 53, 142, 164], "topo_styl": 35, "xy_fnam": 35, "read_fgmax_grids_data": 35, "data_fil": [35, 37], "ij": [35, 136], "xy": [35, 63, 136], "layout": [35, 58, 136], "unexpect": [35, 51, 55, 63, 66, 158], "indent": [35, 51, 63], "quot": [35, 63], "unind": [35, 63, 158], "topotool": [35, 42, 48, 51, 57, 63, 70, 120, 121, 122, 123, 124, 127, 128, 133, 136, 162, 163], "write_to_fgmax_data": 35, "fid": [35, 37], "adjust_fgmax_1d": 35, "x1_desir": 35, "x2_desir": 35, "x1_domain": 35, "x1_new": 35, "x2_new": 35, "npoint": 35, "linspac": [35, 71, 91, 108, 142], "fgout_tool": [36, 151], "complement": 36, "coincid": 36, "wherea": [36, 47, 55, 72, 81, 99], "occur": [36, 66, 75, 158, 159], "signific": [36, 68, 135, 138, 143, 164], "increas": [36, 37, 47, 55, 63, 76, 142, 151], "degrad": 36, "had": [36, 47, 56, 57, 125, 126, 127, 128, 132, 144], "tempor": [36, 47, 64], "seri": [36, 47, 64, 72, 158], "fact": [36, 55, 72, 97, 106, 110, 115, 144], "gauag": 36, "massless": 36, "tracer": [36, 141], "debri": 36, "fixedgrid": [36, 48, 135, 137], "carri": 36, "throughout": [36, 72, 125], "fgout_data": [36, 151], "fgout_grid": [36, 37, 63, 151], "fgoutgrid": [36, 37, 151], "runtim": [36, 109], "binary32": [36, 47, 77, 97, 135, 148, 150, 152], "200": [36, 55, 88, 108, 123, 152], "250": 36, "115": 36, "55": 36, "tstart": [36, 104], "tend": [36, 42, 104], "nout": [36, 77, 152], "37": [36, 51], "ascii": [36, 47, 57, 71, 88, 91, 98, 103, 125, 135, 136, 139, 148, 150, 152, 162, 168], "binary64": [36, 47, 77, 97, 135, 148, 150, 152], "float64": [36, 135, 148], "kind": [36, 91, 93, 98, 118, 129, 135, 140, 148], "float32": [36, 135, 148], "dump": [36, 77, 97, 135, 136, 148], "raw": [36, 97, 135, 148], "almost": [36, 148, 154], "precis": [36, 37, 44, 47, 63, 77, 89, 94, 97, 140, 148, 164], "fgout0001": 36, "t0000": [36, 71], "q0000": [36, 71, 148], "b0000": 36, "amr_level": [36, 77], "hierarchi": [36, 55, 94, 111], "file_prefix": [36, 97, 103, 135], "easier": [36, 62, 81, 125, 127, 142, 167], "manipul": [36, 47, 164], "fgframe": 36, "read_fram": [36, 37], "lazi": 36, "hss": [36, 37], "plottool": [36, 42, 70, 130], "pcolorcel": [36, 42, 70, 130, 142], "minimalist": 36, "geoplot": [36, 53, 55, 83], "cmap": [36, 42, 55, 63, 70, 82, 142, 164], "land_color": 36, "masked_wher": 36, "eta_plot": 36, "tsunami_colormap": 36, "overlap": [36, 115, 119, 120, 162], "fgout_interp": 36, "fgout_modul": 36, "unphys": 36, "intepol": 36, "fgout_writ": 36, "fgoutfram": 37, "make_fgout_fcn_xi": 37, "make_fgout_fcn_xyt": 37, "write_netcdf": 37, "read_netcdf": [37, 42, 70, 127, 128, 162, 164], "reconstruct": [37, 96, 104, 158], "read_netcdf_arrai": 37, "extract": [37, 55, 97, 136, 158, 164, 166], "print_netcdf_info": 37, "drytol": 37, "extent_cent": 37, "extent": [37, 41, 42, 52, 60, 63, 68, 70, 71, 88, 94, 106, 119, 132, 142, 162, 164], "extent_edg": 37, "read_fgout_grids_data": 37, "set_plotdata": 37, "write_to_fgout_data": 37, "get_as_arrai": 37, "rootgrp": 37, "bounds_error": 37, "fill_valu": [37, 97, 164], "nan": [37, 51, 164], "behavior": [37, 48, 58, 72, 115, 116, 124, 130, 132, 154], "regulargridinterpol": 37, "fgout1": 37, "fgout2": 37, "method_xi": 37, "method_t": 37, "linearli": 37, "fname_nc": 37, "contin": 37, "bfinal": 37, "qoi_arrai": 37, "fgout_fram": 37, "nc": [37, 42, 70, 127, 158, 162], "datatyp": 37, "f4": 37, "include_b0": 37, "include_bfin": 37, "metadata": [37, 77, 162, 164], "f8": 37, "byte": [37, 47, 77, 97], "twice": [37, 55, 139, 148], "downstream": 37, "field": [37, 47, 63, 101, 103, 106, 125, 127, 135, 158, 159], "first_test": 38, "euler_2d": [38, 40, 96, 101], "shock_bubble_interact": [38, 40, 93, 96, 105], "iplot": [38, 40, 93, 96, 99], "That": [38, 40, 42, 108, 162], "ensur": [38, 39, 40, 71, 113], "install_prerequisit": 38, "acoustics_1d_example1": [38, 39, 74], "statement": [38, 39, 71, 77, 110, 111, 118, 125, 134, 150], "troubl": [38, 39, 81, 96], "xclaw": [38, 39, 91], "plotting_makeplot": [38, 39], "fortfil": [38, 39], "install_fortran": 39, "prerequisit": [39, 40, 48, 60, 62, 118], "sv": [39, 160], "runtest": [39, 99, 160], "acoustics_1d_heterogen": [39, 160, 167], "regression_test": [39, 160], "acoustics1dheterogeneoustest": [39, 160], "acoustics_3d_heterogen": [39, 160], "acoustics3dheterogeneoustest": [39, 160], "advection_2d_annulu": [39, 160], "advection2dannulustest": [39, 160], "ran": [39, 160], "639": [39, 160], "manual": [40, 89, 98, 105, 107, 116, 160], "launch": [40, 93, 99, 100, 105], "setup": [40, 59, 88, 89, 93, 96, 99, 101, 104, 105, 106, 114, 146, 165], "regiondata": [41, 115, 150, 151], "minlevel": [41, 115, 132, 142, 149, 150, 151], "maxlevel": [41, 71, 115, 132, 142, 149, 150, 151], "clariti": 41, "ultim": 41, "flagregiondata": [41, 130], "everywher": [41, 42, 51, 68, 106, 144], "supplement": [41, 70, 153], "rundatat": 41, "region_domain": 41, "spatial_region_typ": 41, "spatial_region": 41, "restrict": [41, 55, 127, 142, 151, 162], "insid": [41, 94, 99, 103, 140, 142, 164], "trapezoid": 41, "region_trapezoid": 41, "spatial_region_fil": 41, "ruledrectangle_trapezoid": 41, "region_tool": [41, 42, 70, 130, 131, 142], "rr": [41, 70, 71, 84, 142], "ruledrectangl": [41, 70, 130, 142], "piecewiselinear": 41, "ixi": [41, 70, 140, 142], "advection_2d_flagregion": 41, "constraint": [42, 47, 142, 149, 170], "dike": [42, 70, 130, 151], "creation": [42, 82, 96, 119], "even": [42, 52, 55, 62, 65, 75, 86, 97, 109, 115, 130, 149, 150, 162, 165, 167], "inlin": [42, 141], "marching_front": [42, 70, 130], "zmin": [42, 70], "60": [42, 55, 70, 75, 76, 130, 149], "zmax": [42, 70], "40": [42, 55, 70, 77, 115, 151, 161], "land_cmap": 42, "make_colormap": [42, 70, 82], "sea_cmap": 42, "norm": [42, 63, 70, 115, 164], "add_colormap": [42, 70, 124, 130], "data_limit": [42, 70], "data_break": [42, 70, 164], "sea_cmap_dri": 42, "cmap_dri": [42, 70], "norm_dri": [42, 70], "sw": [42, 57, 70, 141], "coast": [42, 70, 115, 144, 164], "whidbei": [42, 70, 142], "maxwelton": [42, 70], "beach": [42, 70, 141], "marchingfront": 42, "region1_png": [42, 70], "imread": [42, 70], "region1": [42, 70], "46": [42, 70, 164], "38": [42, 70], "47": [42, 70, 142], "93": [42, 70, 124], "96": [42, 70], "imshow": [42, 70, 118, 164], "48": [42, 55, 70, 142], "puget": [42, 70, 142], "sound": [42, 70, 88, 102, 108, 142], "ncei": [42, 70, 143, 162, 166], "thredd": [42, 70, 162, 166], "ngdc": [42, 70, 143], "dodsc": [42, 70], "puget_sound_13_mhw_2014": [42, 70], "colorbar": [42, 63, 70, 127, 130, 142, 147, 164], "mhw": [42, 48, 52, 143, 162, 166], "wetland": [42, 70], "lake": [42, 48, 70, 144, 151, 162], "repeat": [42, 70, 84, 139, 149, 151], "wet_point": [42, 70], "select_by_flood": [42, 70], "z1": [42, 70], "z2": [42, 70], "max_it": [42, 70], "zdry": [42, 70], "masked_arrai": [42, 70, 142], "279936": [42, 70], "112": [42, 70], "59775": [42, 70], "mislead": [42, 72], "pink": [42, 63, 82, 147], "distinguish": 42, "wet": [42, 48, 70, 72, 142, 151], "mask_dri": 42, "logical_not": [42, 70], "z_dry": 42, "mask_dry_onshor": 42, "logical_and": [42, 70], "z_allow_wet": 42, "rotat": [42, 49, 53, 136], "dry_point": 42, "shorelin": [42, 55, 164], "inland": [42, 70, 151], "sum": [42, 47, 75, 98, 106, 161], "3x3": 42, "dry_points_sum": 42, "reset": [42, 44, 58, 109], "white_r": 42, "461": 42, "379": 42, "929": 42, "961": 42, "z_format": [42, 70, 164], "1i": [42, 70], "fuction": 42, "set_xyz": [42, 164], "force_dry_init_topo": 42, "_y": [42, 70, 164], "_z": [42, 70, 164], "generate_2d_coordin": [42, 70, 164], "fname_force_dry_init": 42, "864": 42, "ncol": [42, 123], "324": 42, "nrow": 42, "224599074275750e": 42, "02": [42, 63, 97, 102, 150], "793009258334999e": 42, "259259000800000e": 42, "05": [42, 92, 102], "cellsiz": [42, 57, 123, 162], "9999": [42, 57, 162, 164], "nodata_valu": [42, 164], "forcedri": [42, 151], "force_dri": [42, 63, 130], "fname": [42, 63, 132, 142, 150, 151, 152], "qinit_data": [42, 144, 151], "force_dry_list": [42, 151], "setprob": [42, 67, 150, 152, 167], "qinit_modul": 42, "filval": 42, "t_stays_dri": 42, "gotten": 42, "offer": [43, 55, 116], "Or": [43, 63, 84, 142, 164], "dot": [43, 47, 55, 63, 66, 165], "unix": [43, 74], "invis": [43, 123], "encount": [43, 55, 82, 105, 107], "catch": [43, 96], "bash": [44, 55, 61, 62, 71, 76, 99, 111, 146], "export": [44, 55, 61, 62, 71, 76, 99, 107, 146], "f77": [44, 165], "compliant": 44, "yourself": [44, 47, 61], "rerun": [44, 47, 57, 59, 62], "scan": 44, "abil": [44, 118, 123, 125, 129, 158, 164], "meant": [44, 94, 104, 158], "pedant": 44, "fbound": 44, "ffpe": 44, "trap": 44, "invalid": [44, 103], "overflow": [44, 118, 126], "optim": [44, 86, 109], "o2": [44, 76], "fopenmp": [44, 76, 109], "dnetcdf": [44, 162], "lnetcdf": 44, "netcdf4_dir": 44, "ifort": 44, "cb": 44, "cu": 44, "fpe0": 44, "ftrapuv": 44, "fp": 44, "qopenmp": 44, "omp_num_thread": [44, 76, 125, 161], "thread": [44, 76, 115, 130, 161], "2006": [45, 151], "playlist": 45, "pressur": [47, 71, 84, 98, 102, 108, 126, 127, 151, 158, 159], "tide": [47, 48, 51, 127, 143, 164], "behav": [47, 49], "difficult": 47, "clearli": [47, 52, 55, 142], "accuraci": [47, 68, 78, 150, 152], "nonphys": 47, "oscil": [47, 170], "prior": [47, 64, 65, 86, 138, 144, 150, 152, 167], "gaugedata": [47, 64, 150], "gaugeno": [47, 64, 150], "meqn": [47, 77, 140, 167], "varieti": [47, 91], "basi": [47, 71], "file_format": [47, 97, 103, 135, 158], "smallest": [47, 115, 142], "reduct": [47, 118], "display_format": [47, 64], "e15": 47, "q_out_field": 47, "aux_out_field": 47, "min_time_incr": [47, 64], "amount": [47, 52, 58], "decreas": [47, 144, 162], "effect": [47, 55, 68, 71, 94, 98, 115, 116, 143, 151, 154, 164], "turn": [47, 50, 52, 63, 79, 82, 98, 116, 124, 130, 135], "id": [47, 51, 103], "e26": 47, "16": [47, 55, 63, 75, 94, 142, 148], "e8": 47, "multilay": [47, 120, 123, 126, 127, 128], "accumul": [47, 125, 139], "intermit": [47, 125], "max_buff": [47, 125], "gauges_modul": [47, 123, 125], "distinct": [47, 125], "gauge00001": [47, 64, 125], "quickli": [47, 58, 63, 90, 125, 144, 164], "overwritten": [47, 97, 98, 125, 139, 167], "gaugexxxxx": [47, 125, 139], "monoton": [47, 148, 151], "pars": [47, 109], "gaugesolut": 47, "gauge_id": 47, "getgaug": 47, "plotfigur": [47, 82, 118, 147], "300": [47, 142], "each_gaug": 47, "1d_plot": [47, 82, 84, 147], "setgaug": [47, 124], "each_fram": 47, "plotclaw": [47, 81, 82, 84, 147], "plotgaug": 47, "loop": [47, 71, 81, 109, 115, 118, 127, 130, 132, 140, 144, 147, 148, 167], "cleargaug": 47, "_output_from_previous_run": 47, "2d_pcolor": [47, 55], "addgaug": 47, "plot_gauge_loc": 47, "format_str": 47, "ko": 47, "add_label": 47, "overview": [48, 55, 81, 117, 121, 130], "teach": [48, 52, 114], "guarante": [48, 52, 104, 114], "liabil": [48, 52, 65, 86, 114], "underwat": [48, 55], "robust": [48, 127, 141, 164], "gallery_geoclaw": 48, "dtopotool": [48, 75, 121, 122, 124, 127, 128, 162, 163], "kmltool": [48, 51, 130, 131, 133, 163], "geo": [48, 68], "chile": [48, 63, 75], "2010": [48, 63, 75, 151], "dart": 48, "buoi": 48, "previous_pts_chosen": 48, "arcsecond": [48, 162], "force_dry_init": [48, 130], "topograpi": [48, 162], "wide": [49, 62, 111, 141], "insur": [49, 54, 58, 66, 84, 115, 119, 123, 149, 151, 162], "contrast": [49, 57, 142], "newli": 49, "roughli": [49, 56, 142, 161], "transit": [49, 136, 137], "sometim": [49, 62, 66, 70, 78, 82, 88, 98, 118, 127, 134, 143, 144, 151, 159, 166], "prefer": [49, 63, 99, 101, 146, 149, 158], "topo1d": 49, "1d_classic": [49, 118], "geo_data": [49, 64, 137, 151, 154], "rotation": 49, "geometr": [49, 154, 167], "spread": 49, "crater": 49, "endpoint": 49, "pole": 49, "ordinari": [49, 140], "Near": 49, "disturb": [49, 55], "decai": 49, "refocu": 49, "grid_data": 49, "grid_typ": 49, "te": 49, "nonuniform": [49, 71], "fname_celledg": 49, "nonuniform_grid_tool": 49, "make_mapc2p": 49, "deeper": [49, 142, 151, 162], "ocean_shelf_beach": 49, "topo_data": [49, 151], "topofile_path": 49, "dtopo_data": [49, 119, 151], "dtopofil": [49, 63, 75, 151], "dtopofile_path": 49, "mt": [49, 162], "okada_dtopo": 49, "dms2decim": 51, "decim": [51, 63], "dist_meters2latlong": 51, "dist_latlong2met": 51, "haversin": 51, "great": [51, 93, 118], "inv_haversin": 51, "invert": 51, "gctransect": [51, 118], "fetch_noaa_tide_data": 51, "predict": 51, "y0": 51, "bearing_unit": 51, "radian": 51, "beta": [51, 92, 104, 152], "sin": [51, 82], "longitudin": 51, "latitudin": 51, "coord": [51, 55], "negat": [51, 162], "30": [51, 55, 57, 115, 149, 151, 162], "51": 51, "span": [51, 55, 63], "station": [51, 143, 166], "begin_d": 51, "end_dat": 51, "time_zon": 51, "gmt": 51, "datum": [51, 52, 102, 143, 151, 166], "stnd": 51, "metric": 51, "cache_dir": 51, "begin": [51, 63, 94, 98, 102, 108, 141, 158], "op": 51, "api": [51, 127], "tidesandcurr": 51, "scratch": [51, 70, 108], "charact": 51, "datetim": [51, 158], "date_tim": 51, "ndarrai": [51, 92, 94, 102, 106, 158, 164], "water_level": 51, "preliminari": [51, 127, 166], "verifi": [51, 109, 116, 166], "rearth": 51, "6367500": 51, "pm": 51, "tohoku": 51, "crescent": 51, "citi": 51, "xtran": [51, 63], "ytran": [51, 63], "142": 51, "124": 51, "41": [51, 161], "74": [51, 55], "transect2kml": [51, 63], "kml": [51, 63, 123, 125, 126, 127, 130, 131, 142], "formula": [51, 68, 144], "stackexchang": 51, "1783746": 51, "rsphere": [51, 89], "believ": [52, 110, 125, 130], "real": [52, 59, 68, 109, 140, 166], "world": [52, 68, 96, 99, 158], "intend": [52, 89, 127], "approv": 52, "nhtmp": 52, "benchmark": 52, "nthmp": 52, "awar": [52, 99], "scenario": [52, 143], "invest": 52, "learn": [52, 93, 110], "geohazard": 52, "geoscientist": 52, "expert": 52, "cautiou": 52, "sensit": [52, 68], "confirm": 52, "imposs": [52, 148], "encapsul": 52, "knowledg": 52, "inaccuraci": 52, "uncertainti": [52, 68], "subduct": [52, 75], "zone": [52, 55, 63, 149, 150], "understood": 52, "turbul": [52, 104], "bore": 52, "inaccur": 52, "becom": [52, 107, 170], "agreement": 52, "caution": 52, "empir": [52, 68], "corioli": [52, 151, 156, 157], "littl": [52, 75, 97, 143], "coriolis_forc": [52, 151], "know": [52, 62, 66, 75, 86, 113, 126, 130, 132, 140, 143, 164, 165, 166], "upward": 52, "realiti": 52, "hard": [53, 58, 76, 82, 164], "disabl": [53, 97, 105, 151], "plain": 53, "mean_latitud": 53, "hash": [54, 58, 116], "print_git_statu": 54, "git_statu": 54, "power": [55, 60, 81], "georeferenc": 55, "simultan": [55, 125], "gi": [55, 125, 162], "critic": [55, 98, 140], "decis": 55, "nevertheless": 55, "lxml": 55, "pykml": 55, "conda": 55, "pyramid": 55, "geospati": 55, "abstract": 55, "osx": [55, 85], "macport": 55, "homebrew": [55, 85], "gdal_data": 55, "gc": 55, "cv": [55, 71], "epsg": 55, "wkt": 55, "georefer": 55, "warp": 55, "anaconda": [55, 105], "gdal_test": 55, "frame0005fig1": 55, "1440": 55, "1440p": 55, "1440l": 55, "frame0005fig1_tmp": 55, "vrt": 55, "band": [55, 164], "destin": 55, "100": [55, 75, 88, 91, 94, 103, 106, 108, 124, 127, 142, 152, 164], "receiv": [55, 116], "libgdal": 55, "dylib": 55, "liblzma": 55, "xz": 55, "setplot_fil": 55, "setplot_kml": 55, "chile_2010": 55, "slider": [55, 63], "panel": 55, "chile2010": [55, 114, 115, 119, 122, 128, 162], "kml_name": 55, "kml_starttim": 55, "utc": [55, 63], "kml_tz_offset": 55, "kml_index_fnam": 55, "_googleearth": 55, "kml_user_fil": 55, "santiago": 55, "kml_publish": 55, "kml_map_topo_to_latlong": 55, "sidebar": [55, 58], "kml_timezon": 55, "japan": [55, 63], "address": [55, 58, 125], "host": 55, "kml_xlimit": 55, "kml_ylimit": 55, "kml_use_figure_limit": 55, "member": [55, 101, 103, 108], "googleearth": [55, 63], "placemark": 55, "geograph": 55, "viewabl": [55, 91], "remain": [55, 62, 101, 109, 111, 119, 156, 157, 158], "use_for_kml": 55, "120": 55, "kml_use_for_initial_view": 55, "kml_figsiz": 55, "kml_dpi": [55, 63], "kml_tile_imag": 55, "longitude_min": 55, "longitude_max": 55, "latitude_min": 55, "latitude_max": 55, "camera": 55, "size_x_inch": 55, "size_y_inch": 55, "dpi": [55, 63], "pixel": [55, 63], "qualiti": [55, 131], "backend": 55, "furthermor": [55, 108], "pseudo": [55, 71], "height": [55, 102, 164], "transpar": [55, 63], "surface_or_depth": [55, 83], "cmin": [55, 63], "googleearth_transpar": 55, "kml_colorbar": 55, "cmax": [55, 63], "kml_build_colorbar": [55, 63], "alter": 55, "occupi": 55, "contourf": [55, 81], "googleearth_lightblu": 55, "googleearth_darkblu": 55, "appeal": 55, "overlaid": [55, 63], "ridg": 55, "lighter": 55, "darker": 55, "folder": 55, "hide": [55, 71], "unalt": 55, "map_topo_to_latlong": 55, "contan": 55, "referenc": [55, 138, 143, 162], "un": 55, "unzip": 55, "zipinfo": 55, "groundoverlai": 55, "edit": [55, 58, 59, 62, 84], "entri": [55, 64, 88, 98, 109, 158], "low": [55, 70, 89, 164, 166], "unapp": 55, "8x6": 55, "1600": [55, 77], "1200": 55, "notic": [55, 65, 86, 108, 116], "stripe": 55, "plaid": 55, "neither": [55, 63, 65, 86, 125], "evenli": [55, 98], "30x30": 55, "360x360": 55, "baselin": 55, "unaccept": 55, "sharper": [55, 63], "32768": 55, "accordingli": [55, 162], "subject": [55, 70, 115, 149, 151], "round": 55, "prevent": 55, "118": 55, "116": [55, 122], "18": [55, 102, 120, 121, 138], "rcl": 55, "1200x1680": 55, "overland": 55, "flood": [55, 70, 144], "topograph": 55, "longtitud": 55, "crucial": [55, 162], "assumpt": [55, 58], "48000": 55, "17540": 55, "map_cart_to_latlong": 55, "xc": [55, 108], "yc": 55, "topo_xlim": 55, "ge_xlim": 55, "111": [55, 125], "96132553": 55, "36256443": 55, "slope_x": 55, "xp": [55, 89], "topo_ylim": 55, "17500": 55, "ge_ylim": 55, "43": 55, "79453362": 55, "95123268": 55, "slope_i": 55, "yp": [55, 89], "teton": 55, "dam": [55, 144], "collabor": [55, 153], "weight": 55, "boisest": 55, "detect": [55, 66, 97, 105, 109, 165], "clawpack_gpu": 56, "cpp": 56, "cannot": [56, 62, 97, 132, 144, 158], "comparison": 56, "motlei": 56, "1029": 56, "2019ms001635": 56, "acceler": [56, 102], "arxiv": 56, "1808": 56, "02638": 56, "tree": [56, 62, 101, 146], "geo_gpu_pap": 56, "esri": [57, 162], "wikipedia": 57, "tell": [57, 77, 82, 88, 97, 111, 116], "llcorner": [57, 162, 164], "llcenter": [57, 162, 164], "xllcenter": [57, 127, 162], "yllcenter": [57, 127, 162], "nodatavalu": [57, 162], "3000": [57, 162], "4000": [57, 162], "xllcorner": [57, 162], "yllcorner": [57, 162], "smoothli": [57, 72], "our": [57, 67, 88, 113], "represent": [57, 94, 97, 103, 109, 164], "grid_registr": [57, 164], "crop": [57, 164], "coarsen": [57, 115, 127, 128, 149, 162, 164], "subsampl": [57, 162, 166], "coarsen_method": 57, "lon": [57, 162], "md": [58, 59, 127, 146], "intersphinx": 58, "documen": 58, "retir": 58, "conf": [58, 59], "mess": 58, "ff": [58, 63], "hasn": 58, "improperli": 58, "html_theme": 58, "_theme": 58, "flask_loc": 58, "_static": 58, "clawlogo": 58, "jpg": [58, 71], "logo": [58, 126], "clawicon": 58, "ico": 58, "icon": 58, "_templat": [58, 59], "literalinclud": 58, "setaux_default": 58, "rst": [58, 59, 130], "_build1": 58, "rebuilt": 58, "rebuild": 58, "multivers": 58, "sphinxcontrib": 58, "_build": 58, "smv_branch_whitelist": 58, "cp": [58, 59, 74], "fix_links_top_level": 58, "sphinx_web": 58, "decoupl": 58, "resid": [58, 66, 94], "remak": 58, "rsync": 58, "azv": 58, "extra_fil": 58, "cname": 58, "godaddi": 58, "verbatim": 58, "recurs": [58, 59, 74, 119], "rsync_clawpack": 58, "clawdev2013": 58, "redirect": 58, "an11": 58, "geoclawdev": 58, "clawdev": 58, "offici": [59, 85, 127], "subrepo": 59, "__init__": [59, 101, 111, 136], "1rc": 59, "rc": 59, "kentzo": 59, "prefix": [59, 91, 97, 98, 103], "gzip": [59, 97, 130], "draft": 59, "gz": [59, 61], "attach": [59, 97, 106], "upstream": 59, "repo": 59, "permiss": [59, 62, 65, 86], "trickeri": 59, "temp": 59, "mv": 59, "xf": 59, "python3": [59, 111, 126, 132, 137], "sdist": 59, "dist": 59, "xzf": [59, 61], "pkg": [59, 152], "cf": [59, 162], "upload": 59, "testpypi": 59, "twine": 59, "credenti": 59, "okai": 59, "pip3": 59, "uninstal": [59, 62, 111], "dir": [59, 99, 168], "820730": [59, 138], "changes_to_mast": 59, "release_5_x_x": 59, "5_x_x": 59, "installing_pip": 59, "installing_fortcod": 59, "docker_imag": 59, "ideal": [59, 102, 143], "sept": [59, 132], "regist": 60, "untar": 61, "pythonpath": [61, 62], "pypi": [62, 97], "think": [62, 68, 70, 72, 102], "clawpack_src": [62, 111], "egg": 62, "f2py": [62, 78, 89, 96, 101, 109, 140], "installing_opt": 62, "mechan": [62, 106, 138], "fc": [62, 89, 107, 109, 118, 165], "comfort": [62, 101], "claw_vers": 62, "wrong": [62, 67, 71, 98, 111], "pth": 62, "went": [62, 141], "overlai": [63, 133], "bgr": 63, "hex": [63, 82], "00ff00": 63, "yellow": [63, 82], "deg2dm": 63, "regions2kml": 63, "outlin": [63, 71, 84, 130, 140, 147], "box2kml": 63, "quad2kml": 63, "poly2kml": 63, "line2kml": 63, "gauges2kml": 63, "marker": 63, "topo2kml": 63, "dtopo2kml": 63, "fgmax2kml": [63, 130], "fgout2kml": 63, "make_input_data_kml": 63, "pcolorcells_for_kml": [63, 130], "pcolormesh": [63, 70], "png2kml": 63, "wrap": [63, 86, 89, 94, 104, 109, 158], "ge": 63, "topo2kmz": [63, 133], "kmz": [63, 125], "offshor": [63, 68, 70, 142, 144], "kml_header": 63, "kml_footer": 63, "kml_region": 63, "kml_gaug": 63, "kml_png": 63, "kml_cb": 63, "aabbggrr": 63, "dtopo_file_nam": 63, "8888ff": 63, "f2": 63, "num_digit": 63, "trail": 63, "NOT": [63, 65, 82, 86], "cb_filenam": 63, "close_fig": 63, "nrm": 63, "kml_timespan": 63, "event_tim": 63, "tz": 63, "tscale": 63, "timespan": 63, "27t06": 63, "00": [63, 77, 150], "03": [63, 102], "27t07": 63, "04": [63, 94, 102], "daylight": 63, "dst": 63, "timezon": 63, "magic": 63, "tabl": [63, 68, 81, 97], "wisdom": 63, "00ffff": 63, "png_filenam": 63, "dpc": 63, "max_inch": 63, "sharp": 63, "x_edg": [63, 142], "y_edg": [63, 142], "allot": 63, "smear": 63, "slowli": 63, "x_inch": 63, "y_inch": 63, "dcp": 63, "x_cell": 63, "y_cell": 63, "fig": [63, 142], "png_extent": 63, "savefig": [63, 135], "construc": 63, "png_file": 63, "png_name": 63, "radio_styl": 63, "cb_file": 63, "cb_name": 63, "cb_xfrac": 63, "cb_yfrac": 63, "radio": 63, "poli": 63, "max_vertices_in_descript": 63, "quad": 63, "region00": 63, "topo_file_nam": 63, "zlim": 63, "mask_outside_zlim": 63, "eas": [63, 136], "outsiz": 63, "pyplot": [63, 141, 164], "xg": 64, "yg": 64, "stationari": [64, 162], "huge": [64, 70, 144, 162], "frequenc": [64, 75, 104], "ug": 64, "vg": 64, "dt": [64, 89, 94, 98, 104, 118, 148, 150, 152, 162, 167], "euler": [64, 96, 104, 121, 123, 126, 128, 140, 167], "gtype": 64, "particle_tool": [64, 130], "opensourc": [65, 86], "copyright": [65, 86], "reserv": [65, 86], "redistribut": [65, 86], "permit": [65, 86], "retain": [65, 86, 97], "disclaim": [65, 86], "nor": [65, 86], "endors": [65, 86], "promot": [65, 86], "BY": [65, 86], "THE": [65, 86], "holder": [65, 86], "AND": [65, 86], "AS": [65, 86], "OR": [65, 86, 158], "impli": [65, 86, 151], "warranti": [65, 86], "BUT": [65, 86], "OF": [65, 86], "merchant": [65, 86], "fit": [65, 86], "FOR": [65, 86], "IN": [65, 86], "NO": [65, 86], "shall": [65, 86], "BE": [65, 82, 86], "liabl": [65, 86], "indirect": [65, 86], "incident": [65, 86], "exemplari": [65, 86], "consequenti": [65, 86], "procur": [65, 86], "substitut": [65, 86], "loss": [65, 86], "profit": [65, 86], "busi": [65, 86], "interrupt": [65, 86], "ON": [65, 82, 86], "strict": [65, 86], "tort": [65, 86], "neglig": [65, 76, 86, 151], "aris": [65, 86, 118], "IF": [65, 86, 151], "advis": [65, 86], "SUCH": [65, 86], "isn": [66, 76, 77, 165], "bomb": [66, 76], "abort": 66, "claw_outdir": [66, 82], "regener": 66, "safer": 66, "run1": 66, "suffix": [66, 164], "conlict": 66, "advection_1d_example1": 67, "classic_1d": 67, "exclud": 67, "exclude_modul": 67, "exclude_sourc": 67, "rp1_advect": 67, "lib": [67, 111], "common_sourc": 67, "bc1": [67, 109], "claw1ez": 67, "claw1": [67, 109], "copyq1": 67, "inlinelimit": 67, "opendatafil": 67, "out1": 67, "src1": [67, 157, 167, 170], "step1": 67, "wouldn": 67, "spite": [67, 70, 111], "bc1_inflow": 67, "matter": [67, 123], "_t": 68, "cdot": [68, 101, 142], "gamma": [68, 102], "frac": [68, 102, 108, 170], "gn": 68, "gravit": [68, 102, 151, 167], "rough": 68, "terrain": 68, "seab": 68, "025": [68, 151], "enhanc": [68, 86, 127], "threshold": 68, "friction_depth": [68, 151], "runup": 68, "discov": 68, "expon": 68, "arithmet": 68, "3333": 68, "d0": 68, "inadequaci": 68, "ztopo": 70, "pt_chosen": 70, "protect": [70, 130], "levi": [70, 130, 151], "unset": [70, 115], "geq0": 70, "force_dry_arrai": 70, "prev_pts_chosen": 70, "unchosen": 70, "converg": [70, 81], "pts_chosen": [70, 142], "touch": 70, "preserv": [70, 78, 104], "zmask": 70, "subtleti": 70, "ruledrectangle_covering_selected_point": [70, 142], "stretch": [70, 164], "farther": 70, "cmap_land": 70, "cmap_sea": 70, "cmap_topo": 70, "norm_topo": 70, "cmap_sea_dri": 70, "cultu": 70, "bai": [70, 143, 166], "183": 70, "89871": 70, "steep": [70, 170], "fist": 70, "1e6": 70, "arbitrarili": 70, "06": [70, 151], "84800": 70, "augment": [70, 141], "163": 70, "94297": 70, "pts_chosen_shallow": 70, "177": 70, "249577": 70, "zshallow": 70, "pts_chosen_nearshor": 70, "znearshor": 70, "compact": [70, 162], "fname_fgmax_mask": 70, "fgmax_pts_topostyl": 70, "topo_fgmax_mask": 70, "fewer": [70, 115, 164], "121": [70, 142], "pad": 70, "xv": [70, 142], "yv": [70, 142], "925": 70, "965": 70, "69788": 70, "76005": 70, "barrier": [70, 109], "mathwork": 71, "manifold": 71, "isosurfac": 71, "border": [71, 167], "cube": 71, "matlabpath": 71, "perman": [71, 118, 130, 131, 132, 133, 134, 135, 136, 137], "pathtool": 71, "q0001": 71, "t0001": 71, "enter": [71, 97, 99, 105], "plotclaw1": 71, "plotclaw2": 71, "plotclaw3": 71, "_": [71, 82, 101, 102, 113, 164, 170], "setplot2": 71, "ye": 71, "success": [71, 103, 164, 167], "0625": 71, "keyboard": 71, "redraw": [71, 84], "setplot1": 71, "setplot3": 71, "Such": 71, "rho": [71, 102, 108, 150], "rhou": 71, "rhov": 71, "outputdir": 71, "plottyp": 71, "mq": 71, "uservari": 71, "uservariablefil": 71, "temporarili": 71, "encourag": 71, "daspect": 71, "showpatchbord": 71, "showgridlin": 71, "gridlin": 71, "drawcontourlin": 71, "caxi": 71, "shg": 71, "fstr": 71, "framenam": 71, "frame0000": 71, "dpng": 71, "aftergrid": 71, "topic": 71, "clawgraph": 71, "t0002": 71, "doubl": [71, 89, 94, 109, 140, 149], "xxxx": 71, "unpredict": 71, "clash": 71, "strongli": [71, 110], "overridden": [71, 104, 106], "nearbi": [72, 143], "delta": [72, 92, 94, 101, 104, 140, 164, 167, 170], "polynomi": [72, 140], "a_0": 72, "a_1x": 72, "a_2i": 72, "a_3xi": 72, "greatest": [72, 115], "midpoint": [72, 94], "conclud": 72, "intact": [74, 124], "newdir": 74, "moreov": 75, "superposit": 75, "halfspac": 75, "rock": 75, "km": [75, 143], "shallowest": 75, "orient": [75, 89], "downward": 75, "counterclockwis": 75, "hang": 75, "foot": 75, "closer": [75, 150], "instati": [75, 164], "450": 75, "e3": 75, "104": 75, "668": 75, "826": 75, "chile_dtopo": 75, "tt3": [75, 164], "arcminut": [75, 162], "simplifi": [75, 81, 82, 97, 116, 126, 127, 167], "recangl": 75, "translat": 75, "homogen": [75, 104, 167, 170], "steadi": [75, 162], "rare": [75, 125], "flat": 75, "isotrop": 75, "justifi": 75, "poisson": 75, "triangl": 75, "multicor": [76, 125], "stack": [76, 85, 123, 142], "omp_stacks": 76, "16m": 76, "ulimit": 76, "unlimit": [76, 97], "mac": [76, 85, 107, 116, 146], "max1d": [76, 130, 149], "amr_modul": [76, 115, 123, 129, 130], "somewhat": [76, 81, 115, 116, 125, 148], "safe": 76, "output_styl": [77, 88, 91, 98, 135, 139, 148, 150, 152], "output_t0": [77, 136, 139, 148, 150, 152], "elif": [77, 150, 152], "output_tim": [77, 98, 139, 148, 150], "1800": 77, "7200": 77, "iout": [77, 152], "timestep": [77, 91, 98, 124, 126, 148, 150, 152, 158], "ntot": [77, 152], "output_step_interv": [77, 148, 150, 152], "total_step": [77, 148, 150, 152], "postprocess": [77, 98], "editor": 77, "valout": [77, 127, 130, 136, 161], "40000000e": 77, "ngrid": 77, "naux": 77, "nghost": 77, "preceed": [77, 167], "grid_numb": 77, "00000000e": 77, "xlow": 77, "ylow": 77, "25000000e": 77, "former": [77, 82, 167], "cut": [77, 149], "b0002": 77, "decompos": [77, 140, 170], "contigu": [77, 97, 106, 142], "output_aux_compon": [77, 148, 150, 152], "axxxx": [77, 97], "output_aux_onlyonc": [77, 148, 150, 152], "reli": [78, 89, 100, 110, 125], "weno": [78, 96, 104], "rk": [78, 104], "cake": 79, "belki": 79, "shoot": [81, 96], "favorit": 81, "hood": [81, 96], "task": 81, "phoni": 82, "plotexampl": 82, "acou": 82, "add_true_solut": 82, "qtrue": 82, "add_titl": 82, "4e": 82, "iplotclaw_": 82, "plotloop": [82, 84], "mid": 82, "stream": 82, "inherit": [82, 94, 104], "belong": [82, 94, 99, 103, 106], "getcwd": 82, "_output2": [82, 84], "plu": [82, 119, 150, 152, 164], "duplic": [82, 122, 136, 139], "wider": 82, "preced": 82, "pinkfig": 82, "acquir": 82, "get_cmap": 82, "fade": 82, "yellow_red_blu": 82, "ffff00": 82, "rgb": 82, "predefin": 82, "showcolor": 82, "call_setplot": 82, "inadvertantli": 82, "resetplot": [82, 84], "spot": 82, "exam": 82, "pd": [82, 84], "attributeerror": 82, "traceback": 82, "new_plotfgur": 82, "mi": 82, "spell": 82, "debugg": 82, "pdb": 82, "ipdb": 82, "plot_topo_fil": [83, 123], "replot": 84, "vi": [84, 91], "recomput": [84, 88, 120, 129], "my_setplot_fil": 84, "xcode": 85, "python2": [85, 132, 137], "brew": 85, "maco": 85, "scipysuperpack": 85, "pypa": 85, "en": 85, "upgrad": 85, "Their": 86, "appreci": 86, "surviv": 86, "alphabet": 86, "programmat": 86, "petclaw": [86, 99, 100, 101, 103, 109, 111, 116], "jed": 86, "brown": [86, 164], "ondrej": 86, "lisandro": 86, "dalcin": 86, "pyweno": [86, 104], "mainten": 86, "interleav": [86, 102], "kristof": 86, "unterweg": 86, "peanoclaw": 86, "chanc": 86, "reprint": 86, "inhabit": 88, "sigma": 88, "omega": 88, "meshgrid": [88, 101, 142, 164], "exp": [88, 98, 108], "cosin": 88, "imped": [88, 102, 108], "problem_data": [88, 102, 103, 106, 108, 141], "cparam": [88, 106], "set_cparam": [88, 106], "sol": 88, "readi": [88, 89, 91, 105], "clawsolver1d": [88, 91, 94, 104, 108, 140], "bc": [88, 95, 101, 108, 150, 152, 161], "pick": [88, 104], "rp": 88, "acoustics_1d": [88, 96, 102, 108], "decid": [88, 104], "my_rp_modul": 88, "my_acoustics_rp": 88, "tvd": [88, 94, 104, 170], "vanleer": [88, 104, 148, 150, 152], "evolve_to_tim": [88, 104], "keep_copi": [88, 91, 98], "behaviour": 88, "count": 88, "count_from_zero": 88, "write_aux_init": [88, 91], "write_aux_alwai": [88, 91, 98], "compute_p": [88, 91], "accept": [88, 98, 104, 148], "stress": [88, 98], "mp": [88, 98, 106], "clawdata2pyclaw": 89, "aid": 89, "therefor": [89, 99, 127, 162], "reutil": 89, "inde": [89, 99], "computation": [89, 104], "intens": 89, "shallow_spher": [89, 116, 141], "heavili": 89, "succesfulli": 89, "initialize_sourc": 89, "src2": [89, 136, 154, 157, 167], "distutil": [89, 137], "dummi": [89, 104, 167], "queri": [89, 94, 109], "namespac": 89, "docstr": [89, 93, 116], "zp": 89, "num_ghost": [89, 94, 97, 101, 102, 104, 106, 140, 148, 150, 152], "dxc": 89, "dyc": 89, "intent": [89, 140], "cf2py": 89, "multidimension": [89, 96], "fortran_src_wrapp": 89, "xlowerg": 89, "ylowerg": 89, "whith": 89, "hoc": 89, "step2": 89, "step2qcor": 89, "qcor": 89, "two_d_classic_sourc": 89, "flux2": 89, "philim": 89, "output_filenam": 89, "input_filenam": 89, "sagemathcloud": 90, "sagemath": 90, "termin": [90, 146, 148, 149], "my_solv": 91, "my_initial_solut": 91, "entireti": 91, "check_valid": 91, "tradit": [91, 97], "run_data": 91, "f_file_nam": [91, 98], "f_path": 91, "compute_f": [91, 98], "densiti": [91, 98, 102, 106, 108, 149, 150, 167], "file_prefix_p": 91, "prepend": 91, "nstepout": [91, 98], "out_tim": 91, "outdir_p": 91, "output_file_prefix": [91, 98], "_pyclaw_io": 91, "output_opt": 91, "runmak": 91, "xdir": 91, "xclawcmd": 91, "savecod": 91, "viewable_attribut": 91, "cygwin": 91, "xclawerr": 91, "xclawout": 91, "dtdx": 92, "act": [92, 164], "num_wav": [92, 102, 140, 148, 150, 152], "07": [92, 102, 161], "minmod": [92, 94, 104, 148, 150, 152], "minmod_limit": 92, "superbe": [92, 148, 150, 152], "superbee_limit": 92, "van": [92, 104, 148, 150, 152], "leer": [92, 104, 148, 150, 152], "mc": [92, 99, 148, 150, 152], "mc_limit": 92, "beam": 92, "warm": 92, "frommm": 92, "albada": 92, "klein": 92, "sharpen": 92, "van_leer_klein_sharpening_limit": 92, "roe": [92, 102, 132, 140], "scheme": [92, 102], "arora": 92, "arora_ro": 92, "theta": 92, "95": [92, 105], "safeti": 92, "theta_limit": 92, "ultrabe": 92, "cfl_superbe": 92, "cfl_superbee_theta": 92, "beta_limit": 92, "hyperbe": 92, "hyperbee_limit": 92, "superpow": 92, "superpower_limit": 92, "cada": 92, "torrilhon": 92, "cada_torrilhon_limit": 92, "cada_torrilhon_limiter_nonlinear": 92, "1st": [92, 104, 148, 150, 152, 167], "upper_bound_limit": 92, "friedemann": 92, "kemm": 92, "kemm_2009": 92, "08": [92, 94, 161], "depdend": 92, "6666666666666666": 92, "epsilon": 92, "caut": 92, "use_petsc": [93, 99], "solver_typ": [93, 104], "shouldn": 93, "htmlplot": 93, "acoustics_1d_homogen": [93, 116], "love": [93, 140], "nearli": 94, "arg": [94, 103], "patch_index": 94, "add_dimens": 94, "get_dim_attribut": 94, "attr": [94, 103], "lower_glob": 94, "num_cells_glob": 94, "upper_glob": 94, "node": [94, 127], "unmap": 94, "set_printopt": 94, "doctest": 94, "roundoff": 94, "c_center": 94, "p_node": 94, "grid1d": 94, "c_centers_with_ghost": 94, "lambda": [94, 164], "xarr": 94, "p_center": [94, 108], "49": [94, 164], "81": [94, 142, 151], "add_gaug": [94, 98], "gauge_coord": 94, "ind": 94, "c_nodes_with_ghost": 94, "mark_nod": 94, "mark_cent": 94, "setup_gauge_fil": 94, "_compute_c_cent": 94, "c_node": 94, "_compute_c_nod": 94, "gauge_dir_nam": 94, "gauge_file_nam": 94, "gauge_fil": 94, "_compute_p_cent": 94, "_compute_p_nod": 94, "on_lower_boundari": 94, "on_upper_boundari": 94, "995": 94, "101": [94, 161], "centers_with_ghost": 94, "ndarrari": 94, "nodes_with_ghost": 94, "geom": [94, 106], "clawsolver2d": [94, 104], "dimensional_split": [94, 123, 148, 150, 152], "strang": [94, 104, 148, 150, 152, 167], "enabl": [94, 97, 98, 105, 109, 125], "unsplit": [94, 148, 150, 152], "transverse_wav": [94, 148, 150, 152], "no_tran": 94, "trans_inc": 94, "trans_cor": 94, "mthlim": [94, 104], "famili": [94, 104, 150, 152], "enumer": [94, 104], "lax": [94, 104, 148, 150, 152, 170], "wendroff": [94, 104, 148, 150, 152, 170], "source_split": [94, 104, 148, 150, 152, 167], "fwave": [94, 102, 104, 140], "step_sourc": [94, 101, 104], "kernel_languag": [94, 104, 109, 116], "callabl": [96, 109], "precompil": 96, "massiv": 96, "biggest": 96, "supercomput": [96, 98, 99], "rung": [96, 104], "kutta": [96, 104], "intuit": 96, "guidelin": 96, "pyflak": 96, "pylint": 96, "coverag": [96, 116], "advection_1d": [96, 102], "burger": [96, 140, 167], "burgers_1d": [96, 102], "euler_exact_1d": [96, 102], "euler_hll_1d": [96, 102], "euler_hllc_1d": [96, 102], "euler_roe_1d": [96, 102], "shallow_exact_1d": [96, 102], "shallow_fwave_1d": [96, 102, 141], "shallow_hll_1d": [96, 102, 141], "shallow_roe_1d": [96, 102, 141], "2nd": [96, 101, 104, 148, 150, 152, 167], "leveque1997": 96, "32": [97, 99, 107, 149], "netcdf3": 97, "netcdf4": [97, 162, 164], "read_": [97, 103], "write_": 97, "write_aux": [97, 103], "thoroughli": 97, "read_aux": [97, 103], "txxxx": 97, "qxxxx": 97, "read_arrai": 97, "num_var": 97, "read_patch_head": 97, "read_t": 97, "nstate": 97, "write_p": [97, 103], "write_arrai": 97, "why": 97, "bxxxx": 97, "h5py": 97, "pytabl": 97, "moin": 97, "whichev": 97, "wrapper": [97, 164], "hdfgroup": 97, "obtain5": 97, "lzf": 97, "szip": 97, "dataset": [97, 162, 164, 166], "deflat": 97, "compression_opt": 97, "filter": [97, 164], "legal": 97, "ec": 97, "nn": 97, "chunk": 97, "guess": 97, "shuffl": 97, "fletcher32": 97, "pupyner": 97, "effort": 97, "unidata": 97, "ucar": 97, "17": [97, 125, 126, 138, 167], "netcdf3_class": 97, "netcdf3_64bit": 97, "netcdf4_class": 97, "clobber": [97, 124], "zlib": 97, "complevel": 97, "fastest": [97, 105], "poorest": 97, "slowest": 97, "checksum": 97, "trigger": 97, "chunksiz": 97, "hdf": 97, "least_significant_digit": 97, "quantiz": 97, "lossi": 97, "significantli": [97, 127], "endian": 97, "big": 97, "nativ": 97, "gain": 97, "ness": 97, "_fillvalu": 97, "silent": 97, "customari": 98, "_outdir": 98, "hdf5": 98, "write_aux_int": 98, "energi": [98, 102], "trace": 98, "p_function": 98, "absolut": [98, 115, 116, 127, 149, 150], "mf": [98, 106], "elementwis": 98, "total_energi": 98, "tidal": [98, 143], "whenc": 98, "compute_gauge_valu": 98, "sent": [98, 106], "logger": [98, 106], "interac": 98, "silenc": 98, "gone": 98, "reject": [98, 104, 148], "problemat": 98, "shaheen": 98, "getlogg": 98, "setlevel": 98, "desktop": 99, "mainli": 99, "mpirun": [99, 105, 116], "ll": [99, 108], "toolkit": [99, 168], "petsc4pi": [99, 105, 106, 116], "mercuri": 99, "anl": 99, "hg": 99, "bitbucket": 99, "buildsystem": 99, "config": 99, "zsh": 99, "architectur": 99, "csh": 99, "tcsh": 99, "setenv": 99, "cc": [99, 102, 108], "gcc": [99, 105], "cxx": 99, "mpich": 99, "phase": [99, 110, 124, 130, 149], "googlecod": 99, "iinstal": 99, "cython": 99, "demo": 99, "petsc_hello_world": 99, "hello": 99, "easy_instal": 99, "serial": [99, 103, 109, 161], "certainli": 99, "importantli": 99, "ng": 99, "lowerg": 99, "addition": [99, 158], "excerpt": 99, "320": 99, "partit": 99, "html_plot": 100, "interactive_plot": [100, 108], "3rd": [101, 104, 141], "user_bc_low": 101, "custom_bc": 101, "dim": [101, 102, 104], "qbc": [101, 104, 106], "xrang": 101, "aux_bc_low": 101, "aux_bc_upp": 101, "auxbc": [101, 104, 106], "damiansra": 101, "empyclaw": 101, "maxwell_1d_homogen": 101, "mail": [101, 107], "worthwhil": 101, "impati": 101, "reaction": 101, "diffus": 101, "psi": [101, 167, 170], "dq_src": [101, 104], "shockbubbl": 101, "rp_sourc": 101, "rp_": 102, "q_l": [102, 140, 141], "q_r": [102, 140, 141], "aux_l": [102, 140], "aux_r": [102, 140], "oft": 102, "he": 102, "miscellan": 102, "amdq": [102, 140], "fluctuat": [102, 104, 170], "apdq": [102, 140], "ith": 102, "leveque_book_2002": 102, "matrix": 102, "acoustics_1d_pi": 102, "zz": [102, 108], "advection_1d_pi": 102, "u_t": [102, 108], "burgers_1d_pi": 102, "efix": [102, 141], "entropi": [102, 141], "euler_1d_pi": 102, "exact": 102, "hll": 102, "w_1": 102, "q_hat": 102, "s_1": [102, 142], "u_l": [102, 141], "c_l": 102, "lambda_roe_1": 102, "lambda_roe_2": 102, "w_2": 102, "s_2": [102, 142], "u_r": [102, 141], "c_r": 102, "heat": 102, "gamma1": 102, "hllc": 102, "q_hat_l": 102, "q_hat_r": 102, "s_m": 102, "w_3": 102, "s_3": 102, "p_r": 102, "p_l": 102, "rho_l": 102, "s_l": 102, "rho_r": 102, "s_r": 102, "e_l": 102, "e_r": 102, "aug_glob": 102, "26": [102, 135, 136, 138], "calucl": 102, "newton": 102, "shallow_1d_pi": [102, 141], "wari": 102, "grav": [102, 141], "dry_toler": 102, "ubar": 102, "h_l": [102, 141], "h_r": [102, 141], "cbar": [102, 164], "a1": 102, "delta_hu": 102, "delta_h": 102, "a2": 102, "karg": 103, "reachabl": 103, "truli": 103, "capa": 103, "is_valid": [103, 106], "ioerror": 103, "unsuccess": 103, "signitur": 103, "set_all_st": 103, "Will": 103, "start_fram": 103, "acoustics_2d": 104, "sharpclawsolver2d": 104, "expens": [104, 115, 120, 125], "galerkin": 104, "instantan": 104, "bubbl": 104, "clawsolv": [104, 140], "sharpclawsolv": 104, "superclass": 104, "t_end": 104, "sharpclawsolver1d": 104, "riemann_solv": 104, "claw_packag": 104, "sharpclawnd": 104, "semi": 104, "discret": 104, "dq": [104, 162], "ought": 104, "molsolv": 104, "lim_typ": 104, "weno_ord": 104, "17th": 104, "time_integr": 104, "ssp33": 104, "strong": [104, 110], "shu": 104, "osher": 104, "ssp104": 104, "4th": 104, "ssplmm32": 104, "multistep": 104, "ssplmm43": 104, "ssprk22": 104, "butcher": 104, "lmm": 104, "char_decomp": 104, "characterist": 104, "transmiss": 104, "tfluct_solv": 104, "tfluct": 104, "default_tfluct": 104, "aux_time_dep": 104, "cfl_desir": [104, 148, 150, 152], "cfl_max": [104, 148, 150, 152], "call_before_step_each_stag": 104, "before_step": 104, "stage": [104, 143, 144, 162, 164], "accept_reject_step": 104, "check_3rd_ord_cond": 104, "step_index": 104, "dtfe": 104, "ssplmm": 104, "posteriori": 104, "violat": [104, 164], "muct": 104, "dqdt": 104, "get_dt_new": 104, "take_one_step": 104, "update_saved_valu": 104, "check_lmm_cond": 104, "0001": 104, "max_step": 104, "500": [104, 149, 152], "get_dt": 104, "succeed": 104, "step_hyperbol": 104, "my_custom_bc": 104, "soon": 104, "bc_arrai": 104, "difficulti": [105, 107, 111], "modern": [105, 118, 127, 140], "gnu": 105, "ibm": 105, "xlf": 105, "wiki": 105, "gfortranbinari": 105, "ce": 105, "enthought": [105, 107], "canopi": 105, "live": 106, "constructor": 106, "get_aux_glob": 106, "get_auxbc_from_aux": 106, "get_q_glob": 106, "get_qbc_from_q": 106, "set_aux_from_auxbc": 106, "fortran_modul": 106, "seem": [106, 111, 130, 147, 154], "fragil": 106, "interdepend": 106, "set_num_ghost": 106, "set_q_from_qbc": 106, "gauge_data": 106, "keep_gaug": 106, "hack": 106, "stencil_width": 106, "da": 106, "stencil": 106, "worth": 106, "temporari": 106, "processor": 106, "fset": 106, "consult": 107, "g77": 107, "undefin": 107, "bash_profil": [107, 146], "academ": 107, "epd": 107, "ordinarili": 107, "kappa": [108, 170], "eqnarrai": 108, "p_t": 108, "u_x": 108, "p_x": 108, "tipe": 108, "haven": [108, 110], "deepli": 108, "acquaint": 108, "framecount": 109, "counter": [109, 164], "get_count": 109, "reset_count": 109, "set_count": 109, "new_frame_num": 109, "verifyerror": 109, "add_parent_doc": 109, "check_diff": [109, 116], "abstol": 109, "reltol": 109, "compile_librari": 109, "source_list": 109, "module_nam": 109, "interface_funct": 109, "local_path": 109, "library_path": 109, "f2py_flag": 109, "ioexcept": 109, "f95": 109, "lgomp": 109, "o3": 109, "funrol": 109, "finlin": 109, "fdefault": 109, "construct_function_handl": 109, "function_nam": 109, "func": [109, 158], "convert_fort_double_to_float": 109, "0d0": 109, "gen_vari": [109, 116], "disable_petsc": 109, "runnabl": 109, "kernel": 109, "against": [109, 116, 124, 160], "test_app": [109, 116], "unrecogn": 109, "read_data_lin": 109, "inputfil": [109, 164], "num_entri": 109, "data_typ": 109, "run_app_from_main": 109, "run_seri": 109, "fun": 109, "decor": 109, "comm_world": 109, "check_valu": [109, 116], "januari": [110, 117, 125, 138], "ceas": 110, "python3stat": 110, "howto": 110, "pyport": 110, "bewar": [111, 164], "__file__": 111, "subpackag": 111, "_subpackag": 111, "forestclaw": [111, 123], "getusersitepackag": 111, "getsitepackag": 111, "bad": [111, 116], "harm": 111, "drawback": 111, "cmdline": 111, "echo": 111, "perturb": [112, 151, 162], "workshop": [113, 130], "ik": 113, "basin": 113, "distant": [113, 115], "parameter": [113, 127, 142, 151, 158, 159], "_surge_modul": 113, "workflow": [113, 153, 158], "concentr": 113, "hurrican": [113, 158], "katrina": 113, "directorti": 113, "orlean": 113, "atcf": [113, 127, 158, 159], "chile2010b": 114, "topotools_exampl": [114, 164], "regrid_interv": [115, 149, 150], "surround": [115, 164], "escap": [115, 150], "regrid_buffer_width": [115, 149, 150], "tradeoff": 115, "clustering_cutoff": [115, 149, 150], "amrnez": 115, "undivid": 115, "q_": [115, 140, 170], "divid": [115, 148], "exceed": [115, 127], "largest": [115, 143], "suppli": [115, 158, 167, 170], "constrain": 115, "forbidden": 115, "amrflag": 115, "doflag": 115, "dontflag": 115, "adjoint_flag": 115, "tolsp": 115, "errest": 115, "anywher": 115, "wave_toler": [115, 151], "perfom": 116, "yml": 116, "_output_old": 116, "_output_new": 116, "xxdiff": 116, "opendiff": 116, "_plots_old": 116, "_plots_new": 116, "discoveri": 116, "supplementari": 116, "prime": 116, "stdout": 116, "spawn": 116, "occasion": [116, 125], "failur": [116, 128, 144], "acoustics_3d_vari": 116, "combinatori": 116, "test_acoust": 116, "comprehens": 116, "test_shallow_spher": 116, "meson": [118, 137], "sphere_sourc": [118, 136, 137, 154], "checkpt_styl": [118, 124, 139, 148, 150], "granular": 118, "clawpack_tan": 118, "imshow_norm": 118, "imshow_alpha": 118, "facet": 118, "mpeg": 118, "movi": 118, "ffmpeg": 118, "mp4_movi": 118, "movie_fign": 118, "mp4": 118, "jsanim": [118, 119, 123, 135], "gif": 118, "movie_name_prefix": 118, "chile2010_": 118, "movie_": 118, "chile2010_fign": 118, "kill": 118, "enddo": [118, 167], "storag": [118, 124, 132], "topo_modul": 118, "ntogo": 118, "di": [118, 119], "cleanup": [118, 126], "ipython_displai": 119, "underflow": 119, "nest": [119, 125, 149, 150], "refactor": [119, 120, 121, 123, 125, 126, 128, 132], "geolib": [119, 123], "dtopo_modul": 119, "movetopo": 119, "cellgridintegr": 119, "topo_upd": 119, "cellgridintegrate2": 119, "dt_max_dtopo": [119, 151], "dt_initi": [119, 148, 150, 151, 152], "juli": [120, 121, 138], "nohup": 120, "recalcul": 120, "unnecessarili": 120, "clamshel": 120, "test_topotool": [120, 164], "octob": [121, 122, 123, 129, 130, 133, 134, 136, 137, 138], "dtdx1d": 121, "dtdy1d": 121, "jsanimation_frametool": 121, "rpn2_vc_advect": 121, "dtdtopo": 122, "refinementdata": 122, "ticklabel": 122, "114": 122, "didn": 122, "glitch": 122, "nbtool": 123, "formerli": 123, "makefile_kml": 123, "extran": 123, "compare_gaug": 123, "topoplotdata": 123, "favor": [123, 127, 137, 149, 164], "riemann_tool": [123, 141], "amrlib": 123, "dumpgaug": 123, "stepgrid_dimsplit": 123, "step2x": 123, "step2i": 123, "flux2_dimsplit": 123, "step3x": 123, "step3i": 123, "step3z": 123, "flux3_dimsplit": 123, "advection_3d_swirl": [123, 161], "advection_2d_inflow": 123, "allocat": 123, "igetsp": 123, "holland_storm_modul": 123, "stommel_storm_modul": 123, "constant_storm_modul": 123, "storm_modul": 123, "friction_modul": 123, "geoclaw_modul": 123, "consolid": 123, "amr_data_show": 124, "datadir": 124, "riemann_interact": 124, "nbviewer": 124, "maojr": 124, "ipynotebook": 124, "blob": [124, 141], "interactive_test": 124, "unstabl": 124, "guard": 124, "crash": [124, 148, 149], "chk00100": 124, "tck00100": 124, "chkaaaaa": 124, "tckaaaaa": 124, "chkbbbbb": 124, "tckbbbbb": 124, "tck": 124, "chk": 124, "flush": 124, "lose": 124, "unneed": 124, "spend": 124, "inconsist": 124, "__future__": 125, "absolute_import": 125, "print_funct": 125, "capabilit": 125, "num_proc": 125, "coupl": [125, 170], "instabl": [125, 132], "transon": 125, "insidi": 125, "enlarg": 125, "june": [126, 127, 128, 129, 138], "woodward": 126, "collela": 126, "blast": 126, "219": 126, "legend_tool": 126, "legend": [126, 142], "riemann_aug_jcp": 126, "geoclaw_riemann_util": 126, "challeng": 126, "timer": 126, "gradient": [126, 170], "xllower": 127, "yllower": 127, "capabili": 127, "landfal": 127, "highli": [127, 144], "code_of_conduct": 127, "conduct": 127, "plot_timing_stat": [127, 129], "226": 127, "cumul": 127, "maxgr": 127, "rnode": 127, "listofgrid": 127, "10000": [127, 164], "resiz": 127, "10k": 127, "bndlist": 127, "amr_2d": [127, 128], "nodal": 127, "owner": 127, "lookup": 127, "rearrang": 127, "303": 127, "capabilti": 127, "hurdat": [127, 158, 159], "jma": [127, 158, 159], "ibtrac": [127, 158], "tcvital": [127, 158, 159], "wind": [127, 151, 158, 159, 164], "holland": [127, 151, 159], "1980": [127, 151, 159], "stub": 127, "establis": 127, "hwrf": [127, 151, 159], "mimic": 127, "test_etopo1": [127, 162], "etopotool": [127, 162], "etopo1": [127, 142, 143, 162, 164, 166], "gave": 127, "incorrect": [127, 128, 144, 158], "308": 127, "287": 127, "hlle": 128, "adjoint_modul": 128, "amr_1d": 128, "adjointsup_modul": 128, "robustli": 128, "maketopo": [128, 162], "typo": 128, "subprocess": 129, "staff": 129, "timing_plot": 129, "mhd": 129, "faster": [129, 130, 132, 164], "clearer": [129, 132, 133], "topo_miss": 129, "bowl": 129, "slosh": 129, "3764278": [130, 138], "among": 130, "bzip2": 130, "unpack": 130, "get_remote_fil": [130, 164], "notebook_html": 130, "nbconvert": 130, "animation_tool": [130, 131], "ride": 130, "skip_patches_outside_xylimit": [130, 132], "ruled_rectangl": 130, "lagrangian_gaug": 130, "million": 130, "set_eta_init": [130, 144], "subsid": [130, 144, 151], "uplift": [130, 144, 151], "septemb": [131, 138], "weren": 131, "verbosity_regrid": [131, 149, 150], "2021": [132, 133, 134, 135, 138], "4503024": [132, 138], "memsiz": [132, 149], "implicitli": [132, 151], "rpt2_geoclaw": [132, 141], "unnecessari": 132, "prepc": 132, "thought": [132, 143], "advertis": 132, "topotyp": [132, 151, 162], "5595424": [133, 138], "rp1_shallow_hl": 133, "geotiff": 133, "decemb": [134, 135, 138], "5781749": [134, 138], "segment": [134, 142], "2022": [135, 136, 138], "7026045": [135, 138], "trucat": 135, "svg": 135, "pcolor_kwarg": 135, "286": 135, "to_jshtml": 135, "8400237": [136, 138], "claw_python": 136, "pytest": 136, "add_attribut": 136, "cmd": 136, "fgmax_fin": 136, "fgmaxdata": 136, "compabl": 136, "xxx": [137, 162], "redon": 137, "fixed_grid_data": 137, "tba": 138, "10076317": 138, "3528429": 138, "3237295": 138, "1405834": 138, "262111": 138, "50982": 138, "tchknnnnn": 139, "chknnnnn": [139, 148, 150, 152], "nnnnn": [139, 148], "containt": 139, "restart_fil": [139, 148, 150, 152], "commenc": 139, "undesir": 139, "fashion": 139, "traffic": [140, 167], "rp1": [140, 170], "maxm": 140, "ql": 140, "qr": 140, "auxl": 140, "auxr": 140, "mwave": 140, "q_i": [140, 170], "x_": [140, 170], "ell": 140, "cal": [140, 167, 170], "p_": [140, 170], "_ptwise": 140, "rp1_ptwise": 140, "rpn2_ptwise": 140, "rpt2_ptwise": 140, "har": 140, "x_i": [140, 167, 170], "jacobian": [140, 170], "use_fwav": [140, 148, 150, 152], "my_riemann_solv": 140, "solver_nam": 140, "sole": 140, "bmatrix": 141, "graviti": [141, 151], "rp1_shallow_roe_with_efix": 141, "shallow_roe_with_efix_1d": 141, "shallow_1d": 141, "dam_break": 141, "passiv": 141, "rp1_shallow_roe_trac": 141, "shallow_roe_tracer_1d": 141, "shallow_trac": 141, "rp1_shallow_bathymetry_fwav": 141, "shallow_bathymetry_fwave_1d": 141, "sill": 141, "rpn2_shallow_roe_with_efix": 141, "rpt2_shallow_roe_with_efix": 141, "shallow_roe_with_efix_2d": 141, "shallow_2d": 141, "radial_dam_break": 141, "rpn2_shallow_bathymetry_fwav": 141, "shallow_bathymetry_fwave_2d": 141, "rpn2_shallow_spher": 141, "rpt2_shallow_spher": 141, "shallow_sphere_2d": 141, "rossby_wav": 141, "costli": 141, "rpn2_geoclaw": 141, "sw_aug_2d": 141, "rpn2_sw_aug": 141, "reval": 141, "riemann_solut": 141, "plot_phas": 141, "inclus": 142, "union": [142, 162], "y_": 142, "scriptstyl": 142, "x_c": 142, "y_c": 142, "ldot": 142, "unequ": 142, "vstack": 142, "31": 142, "zm": 142, "rrzigzag": 142, "rr2": 142, "readlin": 142, "strip": [142, 164], "nrule": 142, "000000000": 142, "admiralti": 142, "inlet": 142, "kitsap": 142, "peninsula": 142, "strait": 142, "juan": 142, "fuca": 142, "ruledrectangle_admiraltyinlet": 142, "400": 142, "851": 142, "529": 142, "036": 142, "578": 142, "577": 142, "187": 142, "623": 142, "191": 142, "684": 142, "221": 142, "755": 142, "rr_admiralti": 142, "rr_name": 142, "compactli": 142, "enforc": 142, "x_center": 142, "y_center": 142, "logical_or": 142, "edgecolor": 142, "dark": 142, "loc": [142, 164], "129": 142, "degener": 142, "vancouv": 142, "shoal": 142, "inundataion": [143, 166], "relief": [143, 166], "msl": [143, 166], "hilo": [143, 166], "feet": [143, 166], "arc": 143, "presum": 143, "vastli": 143, "fall": [143, 151], "mhhw": 143, "astronom": 143, "aht": 143, "worst": 143, "spacial": 144, "variable_eta_init": [144, 151], "nearfield": 144, "steepli": 144, "siesmic": 144, "eta_init": 144, "ever": [147, 151], "ff9999": 147, "claw_pkg": [148, 149, 150, 151, 152], "analog": [148, 149], "capa_index": [148, 150, 152], "dt_variabl": [148, 150, 152], "output_q_compon": [148, 150, 152], "unsur": 148, "lenght": 148, "dt_max": [148, 150, 152], "stiff": 148, "retak": [148, 150, 152], "contamin": 148, "500000": 148, "steps_max": [148, 150, 152], "infinit": 148, "donor": [148, 150, 152], "upwind": 148, "transmit": 148, "transport": [148, 150, 152], "tranpsort": 148, "central": [148, 158, 159], "decomposit": 148, "srcn": [148, 167], "hyperol": 148, "src_split": [148, 150, 152], "thn": 148, "harder": 148, "checkpt_tim": [148, 150], "checkpt_interv": [148, 150], "refinement_ratios_x": [149, 150], "refinement_ratios_t": [149, 150, 151], "variable_dt_refinement_ratio": [149, 151], "xleft": [149, 150], "yleft": [149, 150], "travel": 149, "pt": [149, 150], "forbiddn": 149, "omp": 149, "spent": [149, 161], "1048575": 149, "4194303": 149, "8388607": 149, "dprint": [149, 150], "eprint": [149, 150], "edebug": [149, 150], "gprint": [149, 150], "bisect": [149, 150], "nprint": [149, 150], "pprint": [149, 150], "rprint": [149, 150], "sprint": [149, 150], "tprint": [149, 150], "uprint": [149, 150], "upbnd": [149, 150], "acoustics_2d_radi": [150, 167], "assert": [150, 152], "probdata": [150, 152], "new_userdata": [150, 152], "add_param": [150, 152], "medium": [150, 167], "000000e": 150, "000000": 150, "chk00006": [150, 152], "ntime": 150, "step_interv": 150, "00000e": 150, "900000": 150, "50000": 150, "amr_level_max": 150, "auxtyp": 150, "001000e": 150, "alg": 150, "toggl": 150, "err": 150, "est": 150, "proj": 150, "__name__": [150, 152], "__main__": [150, 152], "argv": [150, 152], "setrun_setgeo": 151, "refinement_data": 151, "speed_toler": 151, "earth_radiu": 151, "6367": 151, "5e3": 151, "friction_forc": 151, "manning_coeffici": 151, "delin": 151, "manning_break": 151, "file1info": 151, "file2info": 151, "dtopotyp": [151, 162], "qinit_typ": [151, 162], "qinitfil": 151, "qinitdata": 151, "coseism": 151, "surge_data": 151, "wind_forc": 151, "drag": 151, "drag_law": 151, "deterimin": [151, 164], "garret": 151, "powel": 151, "pressure_forc": 151, "wind_index": 151, "pressure_index": 151, "display_landfall_tim": 151, "wind_refin": 151, "r_refin": 151, "storm_specification_typ": 151, "chava": 151, "lin": 151, "emmanuel": 151, "storm_fil": [151, 158], "storm_specif": 151, "classic4": 152, "tout": 152, "javascript": 153, "publicli": 153, "develp": 154, "tropic": 154, "polar": 154, "variat": 154, "circumst": 154, "src1d": 157, "src3": [157, 167], "ensembl": 158, "my_storm": 158, "my_geoclaw_storm": 158, "imd": [158, 159], "nodataerror": 158, "nhc": 158, "japanes": 158, "meterolog": 158, "indian": 158, "meteorlog": 158, "datetiem": 158, "time_offset": 158, "eye_loc": 158, "ey": [158, 159], "decimc": 158, "max_wind_spe": 158, "max_wind_radiu": 158, "central_pressur": 158, "storm_radiu": 158, "iso": 158, "wind_spe": 158, "34kt": 158, "50kt": 158, "64kt": 158, "radii": 158, "categori": 158, "categor": 158, "cat_nam": 158, "car_nam": 158, "read_atcf": 158, "read_geoclaw": 158, "human": 158, "readabl": [158, 159], "read_hurdat": 158, "aoml": 158, "hrd": 158, "data_storm": 158, "single_storm": 158, "risen": 158, "read_ibtrac": 158, "sid": 158, "storm_nam": 158, "start_dat": 158, "agency_pref": 158, "wmo": 158, "usa": 158, "tokyo": 158, "newdelhi": 158, "reunion": 158, "bom": 158, "nadi": 158, "wellington": 158, "cma": 158, "hko": 158, "ds824": 158, "td9636": 158, "td9635": 158, "neumann": 158, "mlc": 158, "v4": 158, "unnam": 158, "wmo_": 158, "wmo_ag": 158, "usa_ag": 158, "closest": 158, "read_imd": 158, "read_jma": 158, "jp": 158, "eng": 158, "rsmc": 158, "hp": 158, "eg": 158, "besttrack": 158, "e_format_bst": 158, "read_tcvit": 158, "write_atcf": 158, "write_geoclaw": 158, "max_wind_radius_fil": 158, "storm_radius_fil": 158, "forecast": 158, "redund": 158, "write_hurdat": 158, "write_imd": 158, "write_jma": 158, "write_tcvit": 158, "available_format": 158, "available_model": 158, "fill_rad_w_other_sourc": 158, "storm_targ": 158, "interp_kwarg": 158, "tri": 158, "storm_ibtrac": 158, "path_to_ibtrac": 158, "2018300n26315": 158, "storm_atcf": 158, "path_to_atcf": 158, "fill_mwr": 158, "out_path": 158, "make_multi_structur": 158, "observerd": 159, "parametr": 159, "gride": 159, "dens": 159, "profil": [159, 164], "_storm_modul": 159, "stepgrid": 161, "850": 161, "853": 161, "288e": 161, "214": 161, "552": 161, "373e": 161, "92": 161, "774": 161, "370": 161, "259": 161, "260e": 161, "108": 161, "838": 161, "414": 161, "664": 161, "301e": 161, "440": 161, "392": 161, "473": 161, "014": 161, "801": 161, "508": 161, "447": 161, "413": 161, "402": 161, "483": 161, "472": 161, "470": 161, "85": 161, "uniformli": 162, "nw": 162, "deduc": 162, "input_path": 162, "output_path": 162, "nodatav": 162, "northernmost": 162, "west": 162, "convens": 162, "subsurfac": 162, "gigabyt": 162, "remote_topo_url": [162, 164], "topo1": 162, "navd88": 162, "determine_topo_typ": 164, "create_topo_func": 164, "topo1writ": 164, "topo2writ": 164, "topo3writ": 164, "swaphead": 164, "capab": 164, "mayb": 164, "in_poli": 164, "topo_func": 164, "unstructur": 164, "topo_fil": 164, "filter_region": 164, "generate_2d_topo": 164, "rai": 164, "cast": 164, "versu": 164, "arrang": 164, "x_mask": 164, "maskedarrai": 164, "interp_unstructur": 164, "fill_topo": 164, "delta_limit": 164, "no_data_valu": 164, "buffer_length": 164, "proximity_radiu": 164, "resolution_limit": 164, "gap": 164, "griddata": 164, "delta_x": 164, "delta_i": 164, "make_shoreline_xi": 164, "shoreline_xi": 164, "segement": 164, "npy": 164, "reload": 164, "long_lat": 164, "cb_kwarg": 164, "linestyl": 164, "compens": 164, "shrink": 164, "nc_param": 164, "read_head": 164, "swap": 164, "replace_no_data_valu": 164, "replace_valu": 164, "smooth_data": 164, "ball": 164, "inf": 164, "oscillatori": 164, "header_styl": 164, "7e": 164, "infer": 164, "arcgi": 164, "asc": 164, "millimet": 164, "15e": 164, "7i": 164, "coorind": 164, "specfi": 164, "topgraphi": 164, "__________________o": 164, "fetch_topo_url": 164, "local_fnam": 164, "ask_us": 164, "get_topo": 164, "claw_topo_download": 164, "run_exampl": 164, "topo_fnam": 164, "remote_directori": 164, "zvar": 164, "return_topo": 164, "return_xarrai": 164, "band1": 164, "xarrai": 164, "xarray_d": 164, "etopo_sample_2min": 164, "0f": 164, "western": 164, "outputfil": 164, "outfil": 164, "nxpoint": 164, "nypoint": 164, "topotype1": 164, "99999": 164, "forget": 165, "whichclaw": 165, "gnufcompil": 165, "tarbal": 165, "config_fc": 165, "fcompil": 165, "printenv": 165, "154": 165, "wc": 166, "catalog": 166, "mllw": 166, "gloss": 166, "sonel": 166, "mbc": 167, "5d0": 167, "heterogen": 167, "b4stepn": 167, "advection_2d_swirl": 167, "1drad": 167, "mx1d": 167, "q1d": 167, "aux1d": 167, "reader": 168, "time_files_scanf": 168, "04d": 168, "grid_files_scanf": 168, "silo": 168, "vm": 169, "equiv": 170, "m_w": 170, "sum_": 170, "sum_p": 170, "qquad": 170, "nonconserv": 170, "eqn": 170, "claw_1dnoncon": 170, "tild": 170, "f_": 170, "kappa_i": 170}, "objects": {"": [[0, 0, 1, "", "ClawPlotAxes"], [1, 0, 1, "", "ClawPlotData"], [2, 0, 1, "", "ClawPlotFigure"], [3, 0, 1, "", "ClawPlotItem"], [1, 2, 1, "", "clearfigures"], [1, 2, 1, "", "clearframes"], [1, 2, 1, "", "getaxes"], [1, 2, 1, "", "getfigure"], [3, 2, 1, "", "getframe"], [3, 2, 1, "", "gethandle"], [1, 2, 1, "", "getitem"], [1, 2, 1, "", "iplotclaw"], [2, 2, 1, "", "new_plotaxes"], [1, 2, 1, "", "new_plotfigure"], [0, 2, 1, "", "new_plotitem"], [1, 2, 1, "", "plotframe"], [1, 2, 1, "", "printframes"], [1, 2, 1, "", "showitems"]], "clawpack.geoclaw": [[32, 1, 0, "-", "dtopotools"], [35, 1, 0, "-", "fgmax_tools"], [37, 1, 0, "-", "fgout_tools"], [63, 1, 0, "-", "kmltools"], [164, 1, 0, "-", "topotools"], [51, 1, 0, "-", "util"]], "clawpack.geoclaw.dtopotools": [[32, 0, 1, "", "CSVFault"], [32, 0, 1, "", "DTopography"], [32, 0, 1, "", "DTopography1d"], [32, 0, 1, "", "Fault"], [32, 0, 1, "", "Fault1d"], [32, 3, 1, "", "Mw"], [32, 0, 1, "", "SiftFault"], [32, 0, 1, "", "SubFault"], [32, 0, 1, "", "SubFault1d"], [32, 0, 1, "", "SubdividedPlaneFault"], [32, 0, 1, "", "TensorProductFault"], [32, 0, 1, "", "UCSBFault"], [32, 3, 1, "", "plot_dZ_colors"], [32, 3, 1, "", "plot_dZ_contours"], [32, 3, 1, "", "rise_fraction"], [32, 3, 1, "", "strike_direction"]], "clawpack.geoclaw.dtopotools.CSVFault": [[32, 2, 1, "", "read"]], "clawpack.geoclaw.dtopotools.DTopography": [[32, 2, 1, "", "dZ_at_t"], [32, 2, 1, "", "dZ_max"], [32, 2, 1, "", "plot_dZ_colors"], [32, 2, 1, "", "plot_dZ_contours"], [32, 2, 1, "", "read"], [32, 2, 1, "", "write"]], "clawpack.geoclaw.dtopotools.DTopography1d": [[32, 2, 1, "", "dZ_at_t"], [32, 2, 1, "", "dZ_cellave_at_t"], [32, 2, 1, "", "read"], [32, 2, 1, "", "write"]], "clawpack.geoclaw.dtopotools.Fault": [[32, 2, 1, "", "Mo"], [32, 2, 1, "", "Mw"], [32, 2, 1, "", "containing_rect"], [32, 2, 1, "", "create_dtopo_xy"], [32, 2, 1, "", "create_dtopography"], [32, 2, 1, "", "plot_subfaults"], [32, 2, 1, "", "plot_subfaults_depth"], [32, 2, 1, "", "read"], [32, 2, 1, "", "set_dynamic_slip"], [32, 2, 1, "", "write"]], "clawpack.geoclaw.dtopotools.SiftFault": [[32, 2, 1, "", "set_subfaults"]], "clawpack.geoclaw.dtopotools.SubFault": [[32, 2, 1, "", "Mo"], [32, 2, 1, "", "calculate_geometry"], [32, 2, 1, "", "calculate_geometry_triangles"], [32, 4, 1, "", "centers"], [32, 2, 1, "", "convert_to_standard_units"], [32, 5, 1, "", "coordinate_specification"], [32, 4, 1, "", "corners"], [32, 5, 1, "", "depth"], [32, 5, 1, "", "dip"], [32, 2, 1, "", "dynamic_slip"], [32, 4, 1, "", "gauss_pts"], [32, 5, 1, "", "latitude"], [32, 5, 1, "", "length"], [32, 5, 1, "", "longitude"], [32, 5, 1, "", "mu"], [32, 2, 1, "", "okada"], [32, 5, 1, "", "rake"], [32, 5, 1, "", "rise_shape"], [32, 5, 1, "", "rise_time"], [32, 5, 1, "", "rise_time_starting"], [32, 5, 1, "", "rupture_time"], [32, 5, 1, "", "rupture_type"], [32, 2, 1, "", "set_corners"], [32, 5, 1, "", "slip"], [32, 5, 1, "", "strike"], [32, 5, 1, "", "width"]], "clawpack.geoclaw.dtopotools.SubFault1d": [[32, 5, 1, "", "coordinate_specification"], [32, 5, 1, "", "latitude"], [32, 5, 1, "", "length"], [32, 5, 1, "", "longitude"], [32, 5, 1, "", "rake"], [32, 5, 1, "", "strike"]], "clawpack.geoclaw.dtopotools.SubdividedPlaneFault": [[32, 2, 1, "", "subdivide"]], "clawpack.geoclaw.dtopotools.UCSBFault": [[32, 2, 1, "", "read"]], "clawpack.geoclaw.fgmax_tools": [[35, 0, 1, "", "FGmaxGrid"], [35, 3, 1, "", "adjust_fgmax_1d"]], "clawpack.geoclaw.fgmax_tools.FGmaxGrid": [[35, 2, 1, "", "bounding_box"], [35, 2, 1, "", "interp_dz"], [35, 2, 1, "", "ps4_to_arrays"], [35, 2, 1, "", "read_fgmax_grids_data"], [35, 2, 1, "", "read_output"], [35, 2, 1, "", "write_to_fgmax_data"]], "clawpack.geoclaw.fgout_tools": [[37, 0, 1, "", "FGoutFrame"], [37, 0, 1, "", "FGoutGrid"], [37, 3, 1, "", "get_as_array"], [37, 3, 1, "", "make_fgout_fcn_xy"], [37, 3, 1, "", "make_fgout_fcn_xyt"], [37, 3, 1, "", "print_netcdf_info"], [37, 3, 1, "", "read_netcdf"], [37, 3, 1, "", "read_netcdf_arrays"], [37, 3, 1, "", "write_netcdf"]], "clawpack.geoclaw.fgout_tools.FGoutFrame": [[37, 4, 1, "", "B"], [37, 4, 1, "", "eta"], [37, 4, 1, "", "h"], [37, 4, 1, "", "hss"], [37, 4, 1, "", "hu"], [37, 4, 1, "", "hv"], [37, 4, 1, "", "s"], [37, 4, 1, "", "u"], [37, 4, 1, "", "v"]], "clawpack.geoclaw.fgout_tools.FGoutGrid": [[37, 4, 1, "", "X"], [37, 4, 1, "", "Y"], [37, 4, 1, "", "extent_centers"], [37, 4, 1, "", "extent_edges"], [37, 2, 1, "", "read_fgout_grids_data"], [37, 2, 1, "", "read_frame"], [37, 2, 1, "", "set_plotdata"], [37, 2, 1, "", "write_to_fgout_data"], [37, 4, 1, "", "x"], [37, 4, 1, "", "y"]], "clawpack.geoclaw.kmltools": [[63, 3, 1, "", "box2kml"], [63, 3, 1, "", "deg2dms"], [63, 3, 1, "", "dtopo2kml"], [63, 3, 1, "", "f2s"], [63, 3, 1, "", "fgmax2kml"], [63, 3, 1, "", "fgout2kml"], [63, 3, 1, "", "gauges2kml"], [63, 3, 1, "", "kml_build_colorbar"], [63, 3, 1, "", "kml_cb"], [63, 3, 1, "", "kml_png"], [63, 3, 1, "", "kml_timespan"], [63, 3, 1, "", "line2kml"], [63, 3, 1, "", "make_input_data_kmls"], [63, 3, 1, "", "pcolorcells_for_kml"], [63, 3, 1, "", "png2kml"], [63, 3, 1, "", "poly2kml"], [63, 3, 1, "", "quad2kml"], [63, 3, 1, "", "regions2kml"], [63, 3, 1, "", "topo2kml"], [63, 3, 1, "", "topo2kmz"], [63, 3, 1, "", "transect2kml"]], "clawpack.geoclaw.surge": [[158, 1, 0, "-", "storm"]], "clawpack.geoclaw.surge.storm": [[158, 6, 1, "", "NoDataError"], [158, 0, 1, "", "Storm"], [158, 3, 1, "", "available_formats"], [158, 3, 1, "", "available_models"], [158, 3, 1, "", "fill_rad_w_other_source"], [158, 3, 1, "", "make_multi_structure"]], "clawpack.geoclaw.surge.storm.Storm": [[158, 2, 1, "", "category"], [158, 2, 1, "", "read"], [158, 2, 1, "", "read_atcf"], [158, 2, 1, "", "read_geoclaw"], [158, 2, 1, "", "read_hurdat"], [158, 2, 1, "", "read_ibtracs"], [158, 2, 1, "", "read_imd"], [158, 2, 1, "", "read_jma"], [158, 2, 1, "", "read_tcvitals"], [158, 2, 1, "", "write"], [158, 2, 1, "", "write_atcf"], [158, 2, 1, "", "write_geoclaw"], [158, 2, 1, "", "write_hurdat"], [158, 2, 1, "", "write_imd"], [158, 2, 1, "", "write_jma"], [158, 2, 1, "", "write_tcvitals"]], "clawpack.geoclaw.topotools": [[164, 0, 1, "", "Topography"], [164, 3, 1, "", "create_topo_func"], [164, 3, 1, "", "determine_topo_type"], [164, 3, 1, "", "fetch_topo_url"], [164, 3, 1, "", "get_topo"], [164, 3, 1, "", "read_netcdf"], [164, 3, 1, "", "swapheader"], [164, 3, 1, "", "topo1writer"], [164, 3, 1, "", "topo2writer"], [164, 3, 1, "", "topo3writer"]], "clawpack.geoclaw.topotools.Topography": [[164, 4, 1, "", "X"], [164, 4, 1, "", "Y"], [164, 4, 1, "", "Z"], [164, 2, 1, "", "crop"], [164, 4, 1, "", "delta"], [164, 4, 1, "", "extent"], [164, 2, 1, "", "generate_2d_coordinates"], [164, 2, 1, "", "generate_2d_topo"], [164, 2, 1, "", "in_poly"], [164, 2, 1, "", "interp_unstructured"], [164, 2, 1, "", "make_shoreline_xy"], [164, 2, 1, "", "plot"], [164, 2, 1, "", "read"], [164, 2, 1, "", "read_header"], [164, 2, 1, "", "replace_no_data_values"], [164, 2, 1, "", "replace_values"], [164, 2, 1, "", "set_xyZ"], [164, 2, 1, "", "smooth_data"], [164, 2, 1, "", "write"], [164, 4, 1, "", "x"], [164, 4, 1, "", "y"], [164, 4, 1, "", "z"]], "clawpack.geoclaw.util": [[51, 3, 1, "", "bearing"], [51, 3, 1, "", "dist_latlong2meters"], [51, 3, 1, "", "dist_meters2latlong"], [51, 3, 1, "", "dms2decimal"], [51, 3, 1, "", "fetch_noaa_tide_data"], [51, 3, 1, "", "gctransect"], [51, 3, 1, "", "haversine"], [51, 3, 1, "", "inv_haversine"]], "clawpack.petclaw.geometry": [[94, 0, 1, "", "Domain"], [94, 0, 1, "", "Patch"]], "clawpack.petclaw.geometry.Domain": [[94, 5, 1, "", "dimensional_split"], [94, 5, 1, "", "fwave"], [94, 5, 1, "", "kernel_language"], [94, 5, 1, "", "mthlim"], [94, 5, 1, "", "order"], [94, 5, 1, "", "source_split"], [94, 5, 1, "", "step_source"], [94, 5, 1, "", "transverse_waves"], [94, 5, 1, "", "verbosity"]], "clawpack.petclaw.state": [[106, 0, 1, "", "State"]], "clawpack.petclaw.state.State": [[106, 4, 1, "", "F"], [106, 4, 1, "", "aux"], [106, 4, 1, "", "fset"], [106, 5, 1, "", "gauge_data"], [106, 2, 1, "", "get_aux_global"], [106, 2, 1, "", "get_auxbc_from_aux"], [106, 2, 1, "", "get_q_global"], [106, 2, 1, "", "get_qbc_from_q"], [106, 5, 1, "", "keep_gauges"], [106, 4, 1, "", "mF"], [106, 4, 1, "", "mp"], [106, 4, 1, "", "num_aux"], [106, 4, 1, "", "num_eqn"], [106, 4, 1, "", "p"], [106, 5, 1, "", "problem_data"], [106, 4, 1, "", "q"], [106, 2, 1, "", "set_num_ghost"], [106, 5, 1, "", "t"]], "clawpack.pyclaw.classic.solver": [[104, 0, 1, "", "ClawSolver"]], "clawpack.pyclaw.classic.solver.ClawSolver": [[104, 5, 1, "", "fwave"], [104, 5, 1, "", "kernel_language"], [104, 5, 1, "", "mthlim"], [104, 5, 1, "", "order"], [104, 2, 1, "", "setup"], [104, 5, 1, "", "source_split"], [104, 2, 1, "", "step"], [104, 2, 1, "", "step_hyperbolic"], [104, 5, 1, "", "step_source"], [104, 5, 1, "", "verbosity"]], "clawpack.pyclaw.controller": [[91, 0, 1, "", "Controller"]], "clawpack.pyclaw.controller.Controller": [[91, 5, 1, "", "F_file_name"], [91, 4, 1, "", "F_path"], [91, 2, 1, "", "check_validity"], [91, 5, 1, "", "compute_F"], [91, 5, 1, "", "compute_p"], [91, 5, 1, "", "file_prefix_p"], [91, 5, 1, "", "frames"], [91, 5, 1, "", "keep_copy"], [91, 5, 1, "", "nstepout"], [91, 5, 1, "", "num_output_times"], [91, 5, 1, "", "out_times"], [91, 5, 1, "", "outdir"], [91, 4, 1, "", "outdir_p"], [91, 5, 1, "", "output_file_prefix"], [91, 5, 1, "", "output_format"], [91, 5, 1, "", "output_options"], [91, 5, 1, "", "output_style"], [91, 5, 1, "", "overwrite"], [91, 2, 1, "", "plot"], [91, 5, 1, "", "plotdata"], [91, 2, 1, "", "run"], [91, 5, 1, "", "rundir"], [91, 5, 1, "", "runmake"], [91, 5, 1, "", "savecode"], [91, 5, 1, "", "solver"], [91, 5, 1, "", "tfinal"], [91, 4, 1, "", "verbosity"], [91, 5, 1, "", "viewable_attributes"], [91, 5, 1, "", "write_aux_always"], [91, 5, 1, "", "write_aux_init"], [91, 5, 1, "", "xclawcmd"], [91, 5, 1, "", "xclawerr"], [91, 5, 1, "", "xclawout"], [91, 5, 1, "", "xdir"]], "clawpack.pyclaw.fileio": [[97, 1, 0, "-", "ascii"], [97, 1, 0, "-", "binary"], [97, 1, 0, "-", "hdf5"], [97, 1, 0, "-", "netcdf"]], "clawpack.pyclaw.fileio.ascii": [[97, 3, 1, "", "read"], [97, 3, 1, "", "read_array"], [97, 3, 1, "", "read_patch_header"], [97, 3, 1, "", "read_t"], [97, 3, 1, "", "write"], [97, 3, 1, "", "write_array"]], "clawpack.pyclaw.fileio.binary": [[97, 3, 1, "", "read"]], "clawpack.pyclaw.fileio.hdf5": [[97, 3, 1, "", "read"], [97, 3, 1, "", "write"]], "clawpack.pyclaw.fileio.netcdf": [[97, 3, 1, "", "read"], [97, 3, 1, "", "write"]], "clawpack.pyclaw.geometry": [[94, 0, 1, "", "Dimension"], [94, 0, 1, "", "Domain"], [94, 0, 1, "", "Grid"], [94, 0, 1, "", "Patch"]], "clawpack.pyclaw.geometry.Dimension": [[94, 4, 1, "", "centers"], [94, 2, 1, "", "centers_with_ghost"], [94, 4, 1, "", "delta"], [94, 4, 1, "", "nodes"], [94, 2, 1, "", "nodes_with_ghost"]], "clawpack.pyclaw.geometry.Domain": [[94, 4, 1, "", "grid"], [94, 4, 1, "", "num_dim"], [94, 4, 1, "", "patch"]], "clawpack.pyclaw.geometry.Grid": [[94, 2, 1, "", "add_dimension"], [94, 2, 1, "", "add_gauges"], [94, 2, 1, "", "c_center"], [94, 4, 1, "", "c_centers"], [94, 2, 1, "", "c_centers_with_ghost"], [94, 4, 1, "", "c_nodes"], [94, 2, 1, "", "c_nodes_with_ghost"], [94, 4, 1, "", "dimensions"], [94, 5, 1, "", "gauge_dir_name"], [94, 5, 1, "", "gauge_file_names"], [94, 5, 1, "", "gauge_files"], [94, 5, 1, "", "gauges"], [94, 2, 1, "", "get_dim_attribute"], [94, 4, 1, "", "num_dim"], [94, 2, 1, "", "p_center"], [94, 4, 1, "", "p_centers"], [94, 4, 1, "", "p_nodes"], [94, 2, 1, "", "plot"], [94, 2, 1, "", "setup_gauge_files"]], "clawpack.pyclaw.geometry.Patch": [[94, 2, 1, "", "add_dimension"], [94, 4, 1, "", "delta"], [94, 4, 1, "", "dimensions"], [94, 2, 1, "", "get_dim_attribute"], [94, 5, 1, "", "level"], [94, 4, 1, "", "lower_global"], [94, 4, 1, "", "name"], [94, 4, 1, "", "num_cells_global"], [94, 4, 1, "", "num_dim"], [94, 5, 1, "", "patch_index"], [94, 4, 1, "", "upper_global"]], "clawpack.pyclaw.limiters": [[92, 1, 0, "-", "tvd"]], "clawpack.pyclaw.limiters.tvd": [[92, 3, 1, "", "arora_roe"], [92, 3, 1, "", "beta_limiter"], [92, 3, 1, "", "cada_torrilhon_limiter"], [92, 3, 1, "", "cada_torrilhon_limiter_nonlinear"], [92, 3, 1, "", "cfl_superbee"], [92, 3, 1, "", "cfl_superbee_theta"], [92, 3, 1, "", "hyperbee_limiter"], [92, 3, 1, "", "limit"], [92, 3, 1, "", "mc_limiter"], [92, 3, 1, "", "minmod_limiter"], [92, 3, 1, "", "superbee_limiter"], [92, 3, 1, "", "superpower_limiter"], [92, 3, 1, "", "theta_limiter"], [92, 3, 1, "", "upper_bound_limiter"], [92, 3, 1, "", "van_leer_klein_sharpening_limiter"]], "clawpack.pyclaw.sharpclaw.solver": [[104, 0, 1, "", "SharpClawSolver"]], "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver": [[104, 2, 1, "", "accept_reject_step"], [104, 5, 1, "", "aux_time_dep"], [104, 5, 1, "", "call_before_step_each_stage"], [104, 5, 1, "", "cfl_desired"], [104, 5, 1, "", "cfl_max"], [104, 5, 1, "", "char_decomp"], [104, 2, 1, "", "check_3rd_ord_cond"], [104, 2, 1, "", "dq"], [104, 5, 1, "", "dq_src"], [104, 2, 1, "", "dqdt"], [104, 5, 1, "", "fwave"], [104, 2, 1, "", "get_dt_new"], [104, 5, 1, "", "kernel_language"], [104, 5, 1, "", "lim_type"], [104, 5, 1, "", "num_ghost"], [104, 2, 1, "", "setup"], [104, 2, 1, "", "step"], [104, 5, 1, "", "tfluct"], [104, 5, 1, "", "tfluct_solver"], [104, 5, 1, "", "time_integrator"], [104, 2, 1, "", "update_saved_values"], [104, 5, 1, "", "weno_order"]], "clawpack.pyclaw.solution": [[103, 0, 1, "", "Solution"]], "clawpack.pyclaw.solution.Solution": [[103, 2, 1, "", "is_valid"], [103, 4, 1, "", "patch"], [103, 2, 1, "", "plot"], [103, 2, 1, "", "read"], [103, 2, 1, "", "set_all_states"], [103, 4, 1, "", "start_frame"], [103, 4, 1, "", "state"], [103, 2, 1, "", "write"]], "clawpack.pyclaw.state": [[106, 0, 1, "", "State"]], "clawpack.pyclaw.state.State": [[106, 5, 1, "", "F"], [106, 5, 1, "", "gauge_data"], [106, 2, 1, "", "get_aux_global"], [106, 2, 1, "", "get_auxbc_from_aux"], [106, 2, 1, "", "get_q_global"], [106, 2, 1, "", "get_qbc_from_q"], [106, 2, 1, "", "is_valid"], [106, 5, 1, "", "keep_gauges"], [106, 4, 1, "", "mF"], [106, 4, 1, "", "mp"], [106, 4, 1, "", "num_aux"], [106, 4, 1, "", "num_eqn"], [106, 5, 1, "", "p"], [106, 5, 1, "", "problem_data"], [106, 2, 1, "", "set_aux_from_auxbc"], [106, 2, 1, "", "set_cparam"], [106, 2, 1, "", "set_num_ghost"], [106, 2, 1, "", "set_q_from_qbc"], [106, 5, 1, "", "t"]], "clawpack.pyclaw": [[109, 1, 0, "-", "util"]], "clawpack.pyclaw.util": [[109, 0, 1, "", "FrameCounter"], [109, 6, 1, "", "VerifyError"], [109, 3, 1, "", "add_parent_doc"], [109, 3, 1, "", "check_diff"], [109, 3, 1, "", "compile_library"], [109, 3, 1, "", "construct_function_handle"], [109, 3, 1, "", "convert_fort_double_to_float"], [109, 3, 1, "", "gen_variants"], [109, 3, 1, "", "read_data_line"], [109, 3, 1, "", "run_app_from_main"], [109, 3, 1, "", "run_serialized"], [109, 3, 1, "", "test_app"]], "clawpack.pyclaw.util.FrameCounter": [[109, 2, 1, "", "get_counter"], [109, 2, 1, "", "increment"], [109, 2, 1, "", "reset_counter"], [109, 2, 1, "", "set_counter"]], "clawpack.riemann": [[102, 1, 0, "-", "acoustics_1D_py"], [102, 1, 0, "-", "advection_1D_py"], [102, 1, 0, "-", "burgers_1D_py"], [102, 1, 0, "-", "euler_1D_py"], [102, 1, 0, "-", "shallow_1D_py"]], "clawpack.riemann.acoustics_1D_py": [[102, 3, 1, "", "acoustics_1D"]], "clawpack.riemann.advection_1D_py": [[102, 3, 1, "", "advection_1D"]], "clawpack.riemann.burgers_1D_py": [[102, 3, 1, "", "burgers_1D"]], "clawpack.riemann.euler_1D_py": [[102, 3, 1, "", "euler_exact_1D"], [102, 3, 1, "", "euler_hll_1D"], [102, 3, 1, "", "euler_hllc_1D"], [102, 3, 1, "", "euler_roe_1D"]], "clawpack.riemann.shallow_1D_py": [[102, 3, 1, "", "shallow_exact_1D"], [102, 3, 1, "", "shallow_fwave_1d"], [102, 3, 1, "", "shallow_hll_1D"], [102, 3, 1, "", "shallow_roe_1D"]]}, "objtypes": {"0": "py:class", "1": "py:module", "2": "py:method", "3": "py:function", "4": "py:property", "5": "py:attribute", "6": "py:exception"}, "objnames": {"0": ["py", "class", "Python class"], "1": ["py", "module", "Python module"], "2": ["py", "method", "Python method"], "3": ["py", "function", "Python function"], "4": ["py", "property", "Python property"], "5": ["py", "attribute", "Python attribute"], "6": ["py", "exception", "Python exception"]}, "titleterms": {"clawplotax": 0, "attribut": [0, 1, 2, 3, 29, 34, 55, 82, 142], "gaug": [0, 47, 55, 64, 98, 166], "plot": [0, 3, 13, 24, 27, 34, 36, 47, 50, 53, 55, 64, 66, 71, 80, 81, 82, 83, 84, 93, 99, 100, 116, 147, 153, 165, 168], "method": [0, 1, 2, 3, 142, 170], "clawplotdata": 1, "clawplotfigur": 2, "clawplotitem": [3, 82], "special": [3, 149], "all": [3, 62, 70], "1d": [3, 8, 18], "plot_typ": 3, "1d_plot": 3, "1d_fill_between": 3, "1d_from_2d_data": 3, "2d": [3, 19, 140], "2d_contour": 3, "2d_pcolor": 3, "2d_imshow": 3, "2d_hillshad": 3, "amr": [3, 5, 6, 24, 70, 76, 115, 142, 149, 151], "colorbar": [3, 55], "about": [4, 86], "thi": [4, 58], "softwar": [4, 17], "licens": [4, 65, 86], "author": 4, "cite": [4, 96], "work": [4, 35, 37, 93, 163, 164, 167], "fund": [4, 86], "guid": [5, 30, 58, 59, 113, 114], "adjoint": 5, "flag": [5, 6, 66, 70, 115, 142, 149], "us": [5, 13, 18, 19, 27, 31, 36, 41, 52, 56, 62, 64, 67, 71, 73, 76, 78, 98, 101, 104, 107, 140, 141, 144, 147, 165, 167], "geoclaw": [5, 15, 16, 20, 24, 27, 42, 48, 49, 50, 51, 52, 53, 55, 76, 79, 83, 112, 115, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 142, 145, 151, 156, 157], "adapt": [6, 16, 27, 41], "mesh": [6, 27], "refin": [6, 16, 27, 41, 115, 151], "algorithm": [6, 17, 70, 78, 170], "ghost": 6, "cell": [6, 42, 142, 151], "boundari": [6, 16, 101, 167, 170], "condit": [6, 16, 101, 108, 167, 170], "choos": [6, 70], "initi": [6, 42, 70, 101, 108, 144, 151, 167], "finer": 6, "grid": [6, 16, 34, 35, 36, 37, 49, 57, 64, 76, 94, 151], "For": 6, "more": [6, 39, 43], "detail": [6, 7, 48], "amrclaw": [7, 8, 9, 10, 20, 27, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 149, 150, 167], "descript": [7, 48], "content": [7, 27, 30, 42, 48, 70, 82, 88, 98, 104, 116, 142], "problem": [8, 89, 101, 108, 167], "old": 8, "approach": 8, "deprec": [8, 151], "doxygen": 9, "document": [9, 11, 32, 35, 37, 51, 58, 59, 63, 96, 126, 127, 155, 164], "flowchart": 10, "applic": [11, 12, 17, 27, 28, 66, 74, 99], "convert": [11, 21, 22], "readm": 11, "rst": 11, "html": [11, 84], "code": [11, 18, 19, 27, 30, 42, 50, 61, 62, 79, 116, 165, 167], "clawcode2html": 11, "clawpack": [12, 13, 17, 20, 21, 22, 23, 24, 25, 26, 27, 31, 46, 56, 58, 59, 60, 61, 66, 78, 79, 89, 92, 104, 105, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 141, 152, 169], "repositori": [12, 20, 25, 30, 54, 58, 59, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 140], "jupyt": [12, 31, 40, 153], "notebook": [12, 31, 40, 110, 153], "submodul": 12, "exampl": [12, 19, 27, 28, 34, 36, 38, 39, 40, 42, 45, 47, 50, 55, 62, 70, 71, 74, 80, 93, 96, 99, 142], "includ": [12, 58], "amazon": 13, "web": 13, "servic": 13, "ec2": 13, "ami": 13, "find": [13, 70, 82], "launch": 13, "an": [13, 38, 39, 40, 55, 64, 70, 74, 99], "instanc": 13, "log": [13, 98], "your": [13, 30, 31, 39, 55, 99, 101, 105, 153, 160], "view": 13, "result": [13, 50, 55, 100, 153], "webpag": [13, 58, 153], "directli": [13, 36], "from": [13, 21, 22, 24, 27, 30, 32, 35, 37, 40, 42, 45, 51, 58, 63, 70, 84, 89, 93, 100, 142, 164], "transfer": 13, "file": [13, 31, 33, 34, 36, 42, 55, 57, 58, 59, 61, 67, 71, 82, 84, 116, 139, 142, 151, 162, 167], "stop": [13, 31], "creat": [13, 31, 42, 55, 59, 70, 71, 74, 88], "own": [13, 31, 101], "b4run": 14, "function": [14, 51, 63, 69, 70, 84, 98, 104, 170], "b4step": [15, 167], "default": [15, 112, 144, 145, 156, 157], "routin": [15, 24, 67, 83, 112, 145, 156, 157], "clamshel": 16, "sphere": [16, 154], "user": [16, 26, 78, 167], "defin": [16, 142], "bibliographi": 17, "paper": 17, "describ": 17, "other": [17, 20, 25, 26, 31, 34, 58, 82, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 142, 144], "refer": [17, 27, 56, 96, 110], "boussinesq": [18, 19], "solver": [18, 19, 78, 88, 96, 101, 102, 104, 108, 140, 141, 167], "One": [18, 49, 140, 141, 170], "space": [18, 19, 49, 170], "dimens": [18, 19, 49, 94, 141, 170], "makefil": [18, 19, 43, 66, 67, 101, 139], "setrun": [18, 19, 24, 47, 148, 149, 150, 151, 152], "py": [18, 19, 24, 36, 82, 111, 147, 148, 149, 150, 151, 152], "two": [19, 141], "type": 19, "dispers": 19, "equat": [19, 102, 108, 141], "The": [19, 55, 69, 70, 71, 108], "sgn": 19, "madsen": 19, "sorensen": 19, "m": 19, "prerequisit": [19, 85], "wave": [19, 140, 170], "break": 19, "switch": [19, 71], "swe": 19, "chang": [20, 24, 82, 104, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "master": [20, 30], "sinc": 20, "v5": [20, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "9": [20, 31, 135, 136, 137], "2": [20, 110, 120, 121, 122, 134, 137], "ar": [20, 82, 118, 127, 128, 129, 130, 131, 132, 133, 134, 135], "backward": [20, 118, 127, 128, 129, 130, 131, 132, 133, 134, 135], "compat": [20, 118, 127, 128, 129, 130, 131, 132, 133, 134, 135], "gener": [20, 24, 32, 35, 37, 51, 58, 63, 127, 128, 129, 130, 131, 132, 133, 134, 135, 137, 151, 164], "classic": [20, 27, 38, 39, 104, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 148, 152, 160], "clawutil": [20, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "visclaw": [20, 27, 64, 81, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "riemann": [20, 27, 96, 101, 102, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 140, 141, 167], "pyclaw": [20, 24, 27, 38, 40, 62, 86, 87, 88, 89, 90, 91, 92, 93, 94, 96, 97, 98, 100, 103, 104, 105, 106, 108, 109, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 160], "4": [21, 22, 23, 24, 89, 125, 126, 138], "3": [21, 42, 70, 123, 124], "6": [21, 22, 89, 128, 129], "5": [22, 24, 31, 127], "0": [22, 24, 31, 117, 118, 119, 120, 123, 125, 127, 128, 130, 132, 135], "python": [22, 84, 85, 105, 110, 111, 130, 163], "convers": 22, "tool": [22, 27, 47, 53, 64, 116, 158, 163], "x": [23, 24, 89, 138], "link": 23, "fortran": [24, 27, 33, 39, 42, 43, 44, 61, 85, 107, 116, 165, 167], "packag": [24, 62, 97, 102], "input": [24, 34, 36, 97, 148, 149], "paramet": [24, 47, 82, 84, 108, 148, 149, 151], "compon": [25, 82], "commun": [26, 30, 79], "workshop": [26, 79], "clinic": 26, "tutori": [26, 108, 110], "avail": [26, 45], "stream": 26, "upcom": 26, "recent": [26, 30], "develop": [26, 27, 30, 79], "sprint": [26, 79], "session": 26, "previou": [26, 58], "event": [26, 55], "full": 27, "tabl": [27, 96], "overview": [27, 147], "get": [27, 31, 50, 71], "start": [27, 31, 50, 113, 114], "geophys": 27, "flow": [27, 88], "visual": [27, 55], "migrat": 27, "older": 27, "version": [27, 31, 43, 54, 56, 58, 59, 62, 111], "resourc": 27, "contribut": [28, 30, 141], "current_data": [29, 84], "guidelin": 30, "report": 30, "fix": [30, 34, 36, 76, 151], "bug": 30, "instal": [30, 39, 40, 60, 61, 62, 78, 85, 96, 99, 105, 107, 111, 160, 165], "instruct": [30, 62], "clone": [30, 61], "most": 30, "github": [30, 59], "check": [30, 116], "out": [30, 70], "branch": [30, 58], "each": [30, 167], "updat": [30, 58, 59], "latest": 30, "never": 30, "commit": 30, "ad": [30, 55, 93, 101, 140], "fork": 30, "remot": 30, "modifi": [30, 67, 139], "issu": 30, "pull": 30, "request": 30, "test": [30, 39, 40, 99, 105, 116, 160], "top": 30, "level": [30, 144, 151], "git": [30, 54, 58, 61, 85], "workflow": 30, "catch": 30, "error": [30, 107], "pyflak": 30, "pylint": 30, "coverag": 30, "troubl": [30, 71, 165], "shoot": [30, 71], "tip": [30, 43, 53, 55, 99], "docker": 31, "abov": 31, "contain": 31, "restart": [31, 88, 139], "run": [31, 38, 39, 40, 50, 88, 90, 93, 99, 100, 116, 148, 149, 165], "move": [31, 32, 49], "between": [31, 82], "host": 31, "machin": [31, 169], "some": [31, 82, 151, 166], "command": [31, 40, 71, 84, 93, 165], "imag": [31, 55], "dockerfil": [31, 59], "binder": 31, "dtopotool": 32, "modul": [32, 35, 37, 51, 63, 96, 109, 150, 152, 164], "topographi": [32, 42, 50, 55, 70, 151, 162, 164, 166], "auto": [32, 35, 37, 51, 63, 164], "docstr": [32, 35, 37, 51, 63, 164], "77": 33, "v": 33, "90": 33, "monitor": [34, 151], "fgmax": [34, 35, 70], "specif": [34, 36, 108, 116, 151, 158, 167], "differ": [34, 55, 62, 67, 78, 82], "point": [34, 70], "style": [34, 58, 77], "valu": [34, 88], "choic": [34, 36], "interpol": [34, 36, 72], "procedur": [34, 36], "A": [34, 36, 142], "simpl": [34, 36, 142], "process": [34, 81], "output": [34, 36, 66, 70, 71, 73, 76, 77, 88, 97, 98, 116, 139, 148, 149, 151, 165], "format": [34, 36, 77, 162], "fgmax_tool": 35, "fgout": [36, 37, 64], "setplot": [36, 71, 82, 84, 147], "produc": [36, 84], "read": [36, 42, 142], "arrai": [36, 42, 70, 77, 107], "registr": [36, 57], "fgout_tool": 37, "ipython": [40, 93], "interpret": 40, "line": [40, 84, 93, 116, 165], "specifi": [41, 64, 82, 84, 115, 147, 148, 149, 151, 167], "flagregion": 41, "rule": [41, 142], "rectangl": [41, 142], "forc": [42, 151], "dry": [42, 70, 151], "sampl": [42, 70, 150, 152], "1": [42, 70, 119, 121, 124, 126, 129, 131, 133, 136], "arcsecond": [42, 70], "dem": [42, 70], "force_dry_init": 42, "usag": 42, "intern": 42, "modif": 42, "compil": [44, 66, 107, 155, 165], "fc": [44, 146], "environ": [44, 146], "variabl": [44, 66, 101, 146], "fflag": 44, "lflag": 44, "pre": 44, "processor": 44, "ppflag": 44, "gfortran": [44, 105], "intel": 44, "book": 45, "fvmhp": 45, "youtub": 45, "video": 45, "galleri": [46, 58, 71], "locat": 47, "coordin": [49, 53, 55], "system": [49, 85], "uniform": 49, "map": [49, 55], "topograpi": 49, "data": [49, 55, 77, 147, 151, 159, 162, 164, 165, 166, 167], "dtopo": [49, 163], "set": [50, 71, 82, 84, 101, 143, 144, 146, 165], "up": [50, 101], "new": [50, 58, 74, 93, 116], "util": [51, 63, 109], "cautionari": 52, "hint": [52, 82, 110], "tsunami": [52, 55, 114, 166], "hazard": 52, "model": [52, 75, 113, 114, 166], "water": [53, 102, 141, 154], "depth": 53, "surfac": [53, 144], "elev": [53, 70, 144], "latitud": [53, 55], "longitud": [53, 55], "ax": 53, "keep": 54, "track": [54, 64], "googl": 55, "earth": 55, "basic": [55, 87, 100], "requir": [55, 167], "option": [55, 61, 84, 99, 101], "gdal": 55, "librari": [55, 67], "chile": 55, "2010": [55, 79], "need": 55, "plotdata": 55, "plotfigur": 55, "figur": [55, 82], "plotax": 55, "plotitem": 55, "overlai": 55, "addit": [55, 149, 151], "kml": 55, "kmz": 55, "tile": 55, "faster": 55, "load": 55, "remov": 55, "alias": 55, "artifact": 55, "multipl": 55, "resolut": [55, 170], "publish": 55, "gpu": 56, "netcdf": [57, 73, 77, 97, 162], "tag": 58, "configur": 58, "doc": 58, "releas": [58, 59, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138], "To": 58, "major": 58, "extra": 58, "built": [58, 93], "sphinx": [58, 155], "page": 58, "do": 59, "prepar": 59, "number": 59, "candid": 59, "tar": [59, 61], "final": 59, "pypi": 59, "zenodo": 59, "open": 59, "scienc": 59, "framework": 59, "osf": 59, "app": 59, "next": [60, 61, 62, 105], "step": [60, 61, 62, 105, 167], "pip": [62, 85, 165], "quick": [62, 113, 114], "experi": 62, "directori": [62, 66, 74, 82], "troubleshoot": [62, 107, 165], "kmltool": 63, "lagrangian": 64, "particl": 64, "altern": 64, "duplic": 66, "base": 66, "sourc": [66, 75, 101, 154, 159, 166, 167, 170], "name": [66, 67], "replac": 67, "same": 67, "man": 68, "friction": 68, "term": [68, 101, 154, 167, 170], "mapc2p": 69, "march": 70, "front": 70, "argument": 70, "mask": 70, "topofil": 70, "region": [70, 115, 142, 151], "previous_pts_chosen": 70, "below": 70, "given": 70, "buffer": 70, "zone": 70, "along": 70, "shore": 70, "onli": 70, "write": [70, 101, 116, 142], "indic": [70, 96], "determin": 70, "area": 70, "mhw": 70, "matlab": 71, "search": 71, "path": [71, 111], "plotclaw": 71, "afterfram": 71, "help": 71, "found": 71, "maxfram": 71, "nearshor": 72, "copi": 74, "exist": 74, "earthquak": [75, 166], "fault": 75, "slip": 75, "okada": 75, "rectangular": 75, "subfault": 75, "kinemat": 75, "ruptur": 75, "triangular": 75, "openmp": 76, "sytl": 77, "ascii": [77, 97], "fort": [77, 82], "t0002": 77, "q0002": 77, "raw": 77, "binari": [77, 97], "aux": [77, 88], "which": [78, 111], "should": 78, "i": [78, 98], "interfac": 78, "parallel": [78, 94, 99, 100, 106], "comput": [78, 139], "photo": 79, "2016": 79, "univers": 79, "washington": 79, "2015": 79, "utah": 79, "2014": 79, "hpc3": 79, "kaust": 79, "2013": 79, "claw": [79, 146], "dev": 79, "uw": 79, "2012": 79, "2011": 79, "hack": 79, "post": 81, "fly": 81, "faq": 82, "what": [82, 84, 98, 141], "": [82, 93, 104, 141, 170], "make": [82, 99, 153, 165], "how": [82, 84, 98], "someth": 82, "than": 82, "q": 82, "add": 82, "anoth": 82, "curv": 82, "e": 82, "g": 82, "true": 82, "solut": [82, 88, 103], "titl": 82, "outdir": 82, "item": 82, "provid": 82, "size": 82, "background": 82, "color": 82, "colormap": 82, "pcolor": 82, "contourf": 82, "debug": [82, 149], "latex": 84, "interact": [84, 93], "iplotclaw": 84, "access": 84, "printfram": 84, "oper": 85, "contributor": 86, "understand": 88, "class": [88, 91, 158], "simul": 88, "creation": 88, "control": [88, 91, 108], "deriv": [88, 98], "quantiti": [88, 98], "port": 89, "cloud": 90, "sage": 90, "math": 90, "limit": 92, "tvd": 92, "cfl": 92, "independ": 92, "depend": [92, 105], "geometri": 94, "serial": [94, 106, 116], "object": [94, 147], "domain": [94, 108], "patch": 94, "petclaw": [94, 106], "go": 95, "further": 95, "featur": 96, "fileio": 97, "hdf5": 97, "frame": 98, "when": 98, "save": [98, 153], "written": 98, "where": 98, "petsc": 99, "correctli": 99, "pass": 99, "script": 101, "auxiliari": 101, "acoust": [102, 108], "advect": 102, "burger": 102, "euler": 102, "shallow": [102, 141, 154], "sharpclaw": 104, "custom": [104, 140], "bc": 104, "signatur": 104, "numpi": 105, "matplotlib": 105, "obtain": 105, "nose": 105, "state": 106, "order": 107, "solv": 108, "drop": 110, "support": [110, 130], "7": [110, 130, 131], "whichclaw": 111, "wa": 111, "import": 111, "sy": 111, "easi": 111, "pth": 111, "pythonpath": [111, 146], "qinit": [112, 151, 162], "storm": [113, 151, 158, 159], "surg": [113, 159], "criteria": 115, "flag2refin": 115, "richardson": 115, "extrapol": 115, "implement": 115, "regress": 116, "travi": 116, "continu": 116, "integr": 116, "diff": 116, "chardiff": 116, "comparison": 116, "imagediff": 116, "pixel": 116, "simultan": 116, "doctest": 116, "note": [117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138], "10": 118, "global": 125, "8": [132, 133, 134], "checkpoint": 139, "after": 139, "dimension": 140, "pointwis": 140, "f": [140, 170], "layer": 141, "potenti": 141, "miss": 141, "demonstr": 141, "roe": 141, "hll": 141, "relat": 142, "convex": 142, "polygon": 142, "d": 142, "slu": 142, "bounding_box": 142, "mask_outsid": 142, "instanti": 142, "make_kml": 142, "cover": 142, "select": 142, "continent": 142, "shelf": 142, "sea_level": 143, "eta": 144, "init": 144, "spatial": [144, 167], "vari": [144, 167], "behavior": 144, "adjust": [144, 151], "sea": [144, 151], "seismic": 144, "deform": 144, "case": 144, "setaux": [145, 167], "desir": 147, "time": [148, 149, 151, 161, 167], "print": 149, "geo": 151, "fixedgrid": 151, "maximum": 151, "arriv": 151, "share": 153, "local": 155, "src1d": [156, 167], "src": [157, 167], "statist": 161, "download": 162, "displac": 162, "topo": 163, "topotool": 164, "f2py": 165, "ex": 165, "bathymetri": 166, "dart": 166, "buoi": 166, "tide": 166, "done": 167, "befor": 167, "visit": 168, "virtual": 169, "propag": 170, "godunov": 170, "high": 170, "formul": 170, "capac": 170}, "envversion": {"sphinx.domains.c": 2, "sphinx.domains.changeset": 1, "sphinx.domains.citation": 1, "sphinx.domains.cpp": 8, "sphinx.domains.index": 1, "sphinx.domains.javascript": 2, "sphinx.domains.math": 2, "sphinx.domains.python": 3, "sphinx.domains.rst": 2, "sphinx.domains.std": 2, "sphinx": 57}, "alltitles": {"ClawPlotAxes": [[0, "clawplotaxes"]], "Attributes": [[0, "attributes"], [1, "attributes"], [2, "attributes"], [3, "attributes"]], "Attributes for gauge plots": [[0, "attributes-for-gauge-plots"]], "Methods": [[0, "methods"], [1, "methods"], [2, "methods"], [3, "methods"]], "ClawPlotData": [[1, "clawplotdata"]], "ClawPlotFigure": [[2, "clawplotfigure"]], "ClawPlotItem": [[3, "clawplotitem"]], "Special attributes for all 1d plots,  plot_type = \u20181d\u2026\u2019": [[3, "special-attributes-for-all-1d-plots-plot-type-1d"]], "Special attributes for plot_type = \u20181d_plot\u2019": [[3, "special-attributes-for-plot-type-1d-plot"]], "Special attributes for plot_type = \u20181d_fill_between\u2019": [[3, "special-attributes-for-plot-type-1d-fill-between"]], "Special attributes for plot_type = \u20181d_from_2d_data\u2019": [[3, "special-attributes-for-plot-type-1d-from-2d-data"]], "Special attributes for all 2d plots,  plot_type = \u20182d\u2026\u2019": [[3, "special-attributes-for-all-2d-plots-plot-type-2d"]], "Special attributes for plot_type = \u20182d_contour\u2019": [[3, "special-attributes-for-plot-type-2d-contour"]], "Special attributes for plot_type = \u20182d_pcolor\u2019": [[3, "special-attributes-for-plot-type-2d-pcolor"]], "Special attributes for plot_type = \u20182d_imshow\u2019": [[3, "special-attributes-for-plot-type-2d-imshow"]], "Special attributes for plot_type = \u20182d_hillshade\u2019": [[3, "special-attributes-for-plot-type-2d-hillshade"]], "AMR Attributes": [[3, "amr-attributes"]], "Colorbar attributes": [[3, "colorbar-attributes"]], "About this software": [[4, "about-this-software"]], "License": [[4, "license"], [65, "license"], [86, "license"]], "Authors": [[4, "authors"]], "Citing this work": [[4, "citing-this-work"]], "Funding": [[4, "funding"], [86, "funding"]], "Guiding AMR with adjoint flagging": [[5, "guiding-amr-with-adjoint-flagging"]], "Using adjoint flagging in GeoClaw": [[5, "using-adjoint-flagging-in-geoclaw"]], "Adaptive mesh refinement (AMR) algorithms": [[6, "adaptive-mesh-refinement-amr-algorithms"]], "Ghost cells and boundary conditions for AMR": [[6, "ghost-cells-and-boundary-conditions-for-amr"]], "Choosing and initializing finer grids": [[6, "choosing-and-initializing-finer-grids"]], "Flagging cells for refinement": [[6, "flagging-cells-for-refinement"]], "For more details": [[6, "for-more-details"]], "AMRClaw Description and Detailed Contents": [[7, "amrclaw-description-and-detailed-contents"]], "AMRClaw for 1d problems": [[8, "amrclaw-for-1d-problems"]], "Old approach, deprecated:": [[8, "old-approach-deprecated"]], "Doxygen documentation of AMRClaw": [[9, "doxygen-documentation-of-amrclaw"]], "AMRClaw Flowcharts": [[10, "amrclaw-flowcharts"]], "Application documentation": [[11, "application-documentation"]], "Converting README.rst to README.html": [[11, "converting-readme-rst-to-readme-html"]], "Converting code to html with clawcode2html": [[11, "converting-code-to-html-with-clawcode2html"]], "Clawpack Applications repository": [[12, "clawpack-applications-repository"]], "Jupyter Notebooks": [[12, "jupyter-notebooks"]], "Submodules": [[12, "submodules"]], "Examples included with Clawpack": [[12, "examples-included-with-clawpack"]], "Amazon Web Services EC2 Clawpack AMI": [[13, "amazon-web-services-ec2-clawpack-ami"]], "Finding the Clawpack AMI": [[13, "finding-the-clawpack-ami"]], "Launching an instance": [[13, "launching-an-instance"]], "Logging on to your instance": [[13, "logging-on-to-your-instance"]], "Using Clawpack": [[13, "using-clawpack"]], "Viewing plots of results": [[13, "viewing-plots-of-results"]], "Viewing webpages directly from your instance": [[13, "viewing-webpages-directly-from-your-instance"]], "Transferring files to/from your instance": [[13, "transferring-files-to-from-your-instance"]], "Stopping your instance": [[13, "stopping-your-instance"]], "Creating your own AMI": [[13, "creating-your-own-ami"]], "b4run function": [[14, "b4run-function"]], "b4step default routines": [[15, "b4step-default-routines"]], "b4step routine in GeoClaw": [[15, "b4step-routine-in-geoclaw"]], "Boundary conditions": [[16, "boundary-conditions"], [170, "boundary-conditions"]], "Boundary conditions for adaptive refinement": [[16, "boundary-conditions-for-adaptive-refinement"]], "Boundary conditions for GeoClaw": [[16, "boundary-conditions-for-geoclaw"]], "Boundary conditions for clamshell grids on the sphere": [[16, "boundary-conditions-for-clamshell-grids-on-the-sphere"]], "User-defined boundary conditions": [[16, "user-defined-boundary-conditions"]], "Bibliography": [[17, "bibliography"]], "Papers describing the Clawpack software and algorithms": [[17, "papers-describing-the-clawpack-software-and-algorithms"]], "Papers describing applications": [[17, "papers-describing-applications"]], "Other references": [[17, "other-references"]], "Boussinesq solvers in One Space Dimension": [[18, "boussinesq-solvers-in-one-space-dimension"]], "Using the 1d Boussinesq code": [[18, "using-the-1d-boussinesq-code"]], "Makefile": [[18, "makefile"], [19, "makefile"]], "setrun.py": [[18, "setrun-py"], [19, "setrun-py"]], "Boussinesq solvers in Two Space Dimensions": [[19, "boussinesq-solvers-in-two-space-dimensions"]], "Boussinesq-type dispersive equations": [[19, "boussinesq-type-dispersive-equations"]], "The SGN equations": [[19, "the-sgn-equations"]], "The Madsen-Sorensen (MS) equations": [[19, "the-madsen-sorensen-ms-equations"]], "Using the 2d Boussinesq code": [[19, "using-the-2d-boussinesq-code"]], "Prerequisites for the 2d Boussinesq code": [[19, "prerequisites-for-the-2d-boussinesq-code"]], "Wave breaking and switching to SWE": [[19, "wave-breaking-and-switching-to-swe"]], "Examples": [[19, "examples"], [42, "examples"], [47, "examples"], [70, "examples"], [96, "examples"], [142, "examples"]], "Changes to master since v5.9.2": [[20, "changes-to-master-since-v5-9-2"]], "Changes that are not backward compatible": [[20, "changes-that-are-not-backward-compatible"], [118, "changes-that-are-not-backward-compatible"], [127, "changes-that-are-not-backward-compatible"], [128, "changes-that-are-not-backward-compatible"], [129, "changes-that-are-not-backward-compatible"], [130, "changes-that-are-not-backward-compatible"], [131, "changes-that-are-not-backward-compatible"], [132, "changes-that-are-not-backward-compatible"], [133, "changes-that-are-not-backward-compatible"], [134, "changes-that-are-not-backward-compatible"], [135, "changes-that-are-not-backward-compatible"]], "General changes": [[20, "general-changes"], [127, "general-changes"], [128, "general-changes"], [129, "general-changes"], [130, "general-changes"], [131, "general-changes"], [132, "general-changes"], [133, "general-changes"], [134, "general-changes"], [135, "general-changes"], [137, "general-changes"]], "Changes to classic": [[20, "changes-to-classic"], [118, "changes-to-classic"], [119, "changes-to-classic"], [120, "changes-to-classic"], [121, "changes-to-classic"], [122, "changes-to-classic"], [123, "changes-to-classic"], [124, "changes-to-classic"], [125, "changes-to-classic"], [126, "changes-to-classic"], [127, "changes-to-classic"], [128, "changes-to-classic"], [129, "changes-to-classic"], [130, "changes-to-classic"], [131, "changes-to-classic"], [132, "changes-to-classic"], [133, "changes-to-classic"], [134, "changes-to-classic"], [135, "changes-to-classic"], [136, "changes-to-classic"], [137, "changes-to-classic"]], "Changes to clawutil": [[20, "changes-to-clawutil"], [118, "changes-to-clawutil"], [119, "changes-to-clawutil"], [120, "changes-to-clawutil"], [121, "changes-to-clawutil"], [122, "changes-to-clawutil"], [123, "changes-to-clawutil"], [124, "changes-to-clawutil"], [125, "changes-to-clawutil"], [126, "changes-to-clawutil"], [127, "changes-to-clawutil"], [128, "changes-to-clawutil"], [129, "changes-to-clawutil"], [130, "changes-to-clawutil"], [131, "changes-to-clawutil"], [132, "changes-to-clawutil"], [133, "changes-to-clawutil"], [134, "changes-to-clawutil"], [135, "changes-to-clawutil"], [136, "changes-to-clawutil"], [137, "changes-to-clawutil"]], "Changes to visclaw": [[20, "changes-to-visclaw"], [118, "changes-to-visclaw"], [119, "changes-to-visclaw"], [120, "changes-to-visclaw"], [121, "changes-to-visclaw"], [122, "changes-to-visclaw"], [123, "changes-to-visclaw"], [124, "changes-to-visclaw"], [125, "changes-to-visclaw"], [126, "changes-to-visclaw"], [127, "changes-to-visclaw"], [128, "changes-to-visclaw"], [129, "changes-to-visclaw"], [130, "changes-to-visclaw"], [131, "changes-to-visclaw"], [132, "changes-to-visclaw"], [133, "changes-to-visclaw"], [134, "changes-to-visclaw"], [135, "changes-to-visclaw"], [136, "changes-to-visclaw"], [137, "changes-to-visclaw"]], "Changes to riemann": [[20, "changes-to-riemann"], [118, "changes-to-riemann"], [119, "changes-to-riemann"], [120, "changes-to-riemann"], [121, "changes-to-riemann"], [122, "changes-to-riemann"], [123, "changes-to-riemann"], [124, "changes-to-riemann"], [125, "changes-to-riemann"], [126, "changes-to-riemann"], [127, "changes-to-riemann"], [128, "changes-to-riemann"], [129, "changes-to-riemann"], [130, "changes-to-riemann"], [131, "changes-to-riemann"], [132, "changes-to-riemann"], [133, "changes-to-riemann"], [134, "changes-to-riemann"], [135, "changes-to-riemann"], [136, "changes-to-riemann"], [137, "changes-to-riemann"]], "Changes to amrclaw": [[20, "changes-to-amrclaw"], [118, "changes-to-amrclaw"], [119, "changes-to-amrclaw"], [120, "changes-to-amrclaw"], [121, "changes-to-amrclaw"], [122, "changes-to-amrclaw"], [123, "changes-to-amrclaw"], [124, "changes-to-amrclaw"], [125, "changes-to-amrclaw"], [126, "changes-to-amrclaw"], [127, "changes-to-amrclaw"], [128, "changes-to-amrclaw"], [129, "changes-to-amrclaw"], [130, "changes-to-amrclaw"], [131, "changes-to-amrclaw"], [132, "changes-to-amrclaw"], [133, "changes-to-amrclaw"], [134, "changes-to-amrclaw"], [135, "changes-to-amrclaw"], [136, "changes-to-amrclaw"], [137, "changes-to-amrclaw"]], "Changes to geoclaw": [[20, "changes-to-geoclaw"], [118, "changes-to-geoclaw"], [119, "changes-to-geoclaw"], [120, "changes-to-geoclaw"], [121, "changes-to-geoclaw"], [122, "changes-to-geoclaw"], [123, "changes-to-geoclaw"], [124, "changes-to-geoclaw"], [125, "changes-to-geoclaw"], [126, "changes-to-geoclaw"], [127, "changes-to-geoclaw"], [128, "changes-to-geoclaw"], [129, "changes-to-geoclaw"], [130, "changes-to-geoclaw"], [131, "changes-to-geoclaw"], [132, "changes-to-geoclaw"], [133, "changes-to-geoclaw"], [134, "changes-to-geoclaw"], [135, "changes-to-geoclaw"], [136, "changes-to-geoclaw"], [137, "changes-to-geoclaw"]], "Changes to PyClaw": [[20, "changes-to-pyclaw"], [117, "changes-to-pyclaw"], [118, "changes-to-pyclaw"], [119, "changes-to-pyclaw"], [120, "changes-to-pyclaw"], [121, "changes-to-pyclaw"], [122, "changes-to-pyclaw"], [123, "changes-to-pyclaw"], [124, "changes-to-pyclaw"], [125, "changes-to-pyclaw"], [126, "changes-to-pyclaw"], [127, "changes-to-pyclaw"], [128, "changes-to-pyclaw"], [129, "changes-to-pyclaw"], [130, "changes-to-pyclaw"], [131, "changes-to-pyclaw"], [132, "changes-to-pyclaw"], [133, "changes-to-pyclaw"], [134, "changes-to-pyclaw"], [135, "changes-to-pyclaw"], [136, "changes-to-pyclaw"], [137, "changes-to-pyclaw"]], "Other Clawpack Repositories": [[20, "other-clawpack-repositories"], [118, "other-clawpack-repositories"], [126, "other-clawpack-repositories"], [127, "other-clawpack-repositories"], [128, "other-clawpack-repositories"], [129, "other-clawpack-repositories"], [130, "other-clawpack-repositories"], [131, "other-clawpack-repositories"], [132, "other-clawpack-repositories"], [133, "other-clawpack-repositories"], [134, "other-clawpack-repositories"], [135, "other-clawpack-repositories"], [136, "other-clawpack-repositories"], [137, "other-clawpack-repositories"]], "Converting from Clawpack 4.3 to 4.6": [[21, "converting-from-clawpack-4-3-to-4-6"]], "Converting from Clawpack 4.6 to 5.0": [[22, "converting-from-clawpack-4-6-to-5-0"]], "Python conversion tool": [[22, "python-conversion-tool"]], "Clawpack 4.x links": [[23, "clawpack-4-x-links"]], "Changes in Clawpack 5.0": [[24, "changes-in-clawpack-5-0"]], "PyClaw in 5.0": [[24, "pyclaw-in-5-0"]], "Fortran package changes": [[24, "fortran-package-changes"]], "Changes to input parameters in setrun.py from 4.x to 5.0": [[24, "changes-to-input-parameters-in-setrun-py-from-4-x-to-5-0"]], "Changes to general parameters": [[24, "changes-to-general-parameters"]], "Changes to AMR parameters": [[24, "changes-to-amr-parameters"]], "Changes to GeoClaw parameters": [[24, "changes-to-geoclaw-parameters"]], "Changes to plotting routines": [[24, "changes-to-plotting-routines"]], "Clawpack components": [[25, "clawpack-components"]], "Other repositories": [[25, "other-repositories"]], "Clawpack Community": [[26, "clawpack-community"]], "User Workshops, Clinics, and Tutorials": [[26, "user-workshops-clinics-and-tutorials"]], "Available for streaming": [[26, "available-for-streaming"]], "Upcoming": [[26, "upcoming"], [26, "id1"]], "Recent": [[26, "recent"]], "Developer Workshops and Sprint Sessions": [[26, "developer-workshops-and-sprint-sessions"]], "Previous": [[26, "previous"]], "Other Clawpack events": [[26, "other-clawpack-events"]], "Contents": [[27, "id1"], [30, "contents"], [42, "contents"], [70, "contents"], [82, "contents"], [88, "contents"], [98, "contents"], [104, "contents"], [116, "contents"], [142, "contents"]], "Full Table of Contents": [[27, "full-table-of-contents"]], "Overview and Getting Started": [[27, "overview-and-getting-started"]], "Examples and Applications": [[27, "examples-and-applications"]], "Classic, AMRClaw, and GeoClaw": [[27, "classic-amrclaw-and-geoclaw"]], "Using the Fortran codes": [[27, "using-the-fortran-codes"]], "AMRClaw: adaptive mesh refinement": [[27, "amrclaw-adaptive-mesh-refinement"]], "GeoClaw: geophysical flows": [[27, "geoclaw-geophysical-flows"]], "PyClaw": [[27, "pyclaw"], [38, "pyclaw"], [96, "pyclaw"], [116, "pyclaw"], [160, "pyclaw"]], "Riemann": [[27, "riemann"]], "VisClaw: Plotting and Visualization Tools": [[27, "visclaw-plotting-and-visualization-tools"]], "Migrating applications from older versions of Clawpack": [[27, "migrating-applications-from-older-versions-of-clawpack"]], "Developers\u2019 resources": [[27, "developers-resources"]], "References": [[27, "references"], [56, "references"]], "Contributing examples and applications": [[28, "contributing-examples-and-applications"]], "current_data": [[29, "current-data"]], "Attributes of current_data:": [[29, "attributes-of-current-data"]], "Developers\u2019 Guide": [[30, "developers-guide"]], "Guidelines for contributing": [[30, "guidelines-for-contributing"]], "Reporting and fixing bugs": [[30, "reporting-and-fixing-bugs"]], "Developer communication": [[30, "developer-communication"]], "Installation instructions for developers": [[30, "installation-instructions-for-developers"]], "Cloning the most recent code from Github": [[30, "cloning-the-most-recent-code-from-github"]], "Checking out the master branch on each repository": [[30, "checking-out-the-master-branch-on-each-repository"]], "Updating to the latest master branch": [[30, "updating-to-the-latest-master-branch"]], "Never commit to master": [[30, "never-commit-to-master"]], "Adding your fork as a remote": [[30, "adding-your-fork-as-a-remote"]], "Modifying code": [[30, "modifying-code"]], "Issuing a pull request": [[30, "issuing-a-pull-request"]], "Testing a pull request": [[30, "testing-a-pull-request"]], "Top-level pull requests": [[30, "top-level-pull-requests"]], "Git workflow": [[30, "git-workflow"]], "Catching errors with Pyflakes and Pylint": [[30, "catching-errors-with-pyflakes-and-pylint"]], "Checking test coverage": [[30, "checking-test-coverage"]], "Trouble-Shooting Tips": [[30, "trouble-shooting-tips"]], "Docker for Clawpack": [[31, "docker-for-clawpack"]], "Using Version 5.9.0 or above": [[31, "using-version-5-9-0-or-above"]], "Getting started": [[31, "getting-started"]], "Stopping a container": [[31, "stopping-a-container"]], "Restarting a container": [[31, "restarting-a-container"]], "Running Jupyter notebooks": [[31, "running-jupyter-notebooks"]], "Moving files between the docker container and the host machine": [[31, "moving-files-between-the-docker-container-and-the-host-machine"]], "Some other useful docker commands": [[31, "some-other-useful-docker-commands"]], "Creating your own docker image": [[31, "creating-your-own-docker-image"]], "Dockerfiles for binder": [[31, "dockerfiles-for-binder"]], "dtopotools module for moving topography": [[32, "dtopotools-module-for-moving-topography"]], "Documentation auto-generated from the module docstrings": [[32, "module-clawpack.geoclaw.dtopotools"], [35, "module-clawpack.geoclaw.fgmax_tools"], [37, "module-clawpack.geoclaw.fgout_tools"], [51, "module-clawpack.geoclaw.util"], [63, "module-clawpack.geoclaw.kmltools"], [164, "module-clawpack.geoclaw.topotools"]], "Fortran 77 vs. Fortran 90 files": [[33, "fortran-77-vs-fortran-90-files"]], "Fixed grid monitoring (fgmax)": [[34, "fixed-grid-monitoring-fgmax"]], "Input file specification": [[34, "input-file-specification"], [36, "input-file-specification"]], "Different point styles": [[34, "different-point-styles"]], "Other attributes": [[34, "other-attributes"]], "Values to monitor": [[34, "values-to-monitor"]], "Choice of interpolation procedure": [[34, "choice-of-interpolation-procedure"], [36, "choice-of-interpolation-procedure"]], "A simple example": [[34, "a-simple-example"], [36, "a-simple-example"]], "Processing and plotting fgmax output": [[34, "processing-and-plotting-fgmax-output"]], "Format of the output files": [[34, "format-of-the-output-files"]], "fgmax examples": [[34, "fgmax-examples"]], "fgmax_tools module for working with fgmax grids": [[35, "fgmax-tools-module-for-working-with-fgmax-grids"]], "Fixed grid output (fgout)": [[36, "fixed-grid-output-fgout"]], "Format of fgout output": [[36, "format-of-fgout-output"]], "Using setplot.py to produce plots": [[36, "using-setplot-py-to-produce-plots"]], "Reading and plotting fgout arrays directly": [[36, "reading-and-plotting-fgout-arrays-directly"]], "fgout grid registration": [[36, "fgout-grid-registration"]], "fgout examples": [[36, "fgout-examples"]], "fgout_tools module for working with fgout grids": [[37, "fgout-tools-module-for-working-with-fgout-grids"]], "Running an example": [[38, "running-an-example"], [39, "running-an-example"], [40, "running-an-example"]], "Classic": [[38, "classic"], [39, "classic"], [160, "classic"]], "Testing your Fortran installation and running an example": [[39, "testing-your-fortran-installation-and-running-an-example"]], "More examples": [[39, "more-examples"]], "Testing a PyClaw installation and running an example": [[40, "testing-a-pyclaw-installation-and-running-an-example"]], "From the Jupyter notebook": [[40, "from-the-jupyter-notebook"]], "From the IPython interpreter": [[40, "from-the-ipython-interpreter"]], "From the command line": [[40, "from-the-command-line"], [93, "from-the-command-line"]], "Specifying flagregions for adaptive refinement": [[41, "specifying-flagregions-for-adaptive-refinement"]], "Using ruled rectangles as flagregions": [[41, "using-ruled-rectangles-as-flagregions"]], "Force Cells to be Dry Initially": [[42, "force-cells-to-be-dry-initially"]], "Sample topography from a 1/3 arcsecond DEM": [[42, "sample-topography-from-a-1-3-arcsecond-dem"], [70, "sample-topography-from-a-1-3-arcsecond-dem"]], "Creating the force_dry_init array": [[42, "creating-the-force-dry-init-array"]], "Create file to read into GeoClaw": [[42, "create-file-to-read-into-geoclaw"]], "Usage in GeoClaw Fortran code": [[42, "usage-in-geoclaw-fortran-code"]], "Internal GeoClaw modifications": [[42, "internal-geoclaw-modifications"]], "Fortran version": [[43, "fortran-version"]], "Makefiles": [[43, "makefiles"]], "More tips": [[43, "more-tips"]], "Fortran Compilers": [[44, "fortran-compilers"]], "FC environment variable": [[44, "fc-environment-variable"]], "FFLAGS environment variable": [[44, "fflags-environment-variable"]], "LFLAGS environment variable": [[44, "lflags-environment-variable"]], "Pre-Processor and the PPFLAGS environment variable": [[44, "pre-processor-and-the-ppflags-environment-variable"]], "gfortran compiler": [[44, "gfortran-compiler"]], "Intel fortran compiler": [[44, "intel-fortran-compiler"]], "Examples from the book FVMHP": [[45, "examples-from-the-book-fvmhp"]], "Available examples": [[45, "available-examples"]], "YouTube Videos": [[45, "youtube-videos"]], "Clawpack Gallery": [[46, "clawpack-gallery"]], "Gauges": [[47, "gauges"]], "Gauge parameters in setrun": [[47, "gauge-parameters-in-setrun"]], "Plotting tools": [[47, "plotting-tools"]], "Plotting gauge locations": [[47, "plotting-gauge-locations"]], "GeoClaw Description and Detailed Contents": [[48, "geoclaw-description-and-detailed-contents"]], "GeoClaw in One Space Dimension": [[49, "geoclaw-in-one-space-dimension"]], "Coordinate systems": [[49, "coordinate-systems"]], "Uniform and mapped grids": [[49, "uniform-and-mapped-grids"]], "Topograpy data": [[49, "topograpy-data"]], "Moving topograpy (dtopo) data": [[49, "moving-topograpy-dtopo-data"]], "Getting started with GeoClaw": [[50, "getting-started-with-geoclaw"]], "Running a GeoClaw code": [[50, "running-a-geoclaw-code"]], "Topography": [[50, "topography"]], "Plotting GeoClaw results": [[50, "plotting-geoclaw-results"]], "Setting up a new example": [[50, "setting-up-a-new-example"]], "geoclaw.util module of utility functions": [[51, "geoclaw-util-module-of-utility-functions"]], "Cautionary Hints on using GeoClaw": [[52, "cautionary-hints-on-using-geoclaw"]], "Tsunami hazard modeling": [[52, "tsunami-hazard-modeling"]], "GeoClaw plotting tools": [[53, "geoclaw-plotting-tools"]], "Plotting water depth or surface elevation": [[53, "plotting-water-depth-or-surface-elevation"]], "Tips on latitude-longitude coordinate axes": [[53, "tips-on-latitude-longitude-coordinate-axes"]], "Keeping track of repository versions with Git": [[54, "keeping-track-of-repository-versions-with-git"]], "Visualizing GeoClaw results in Google Earth": [[55, "visualizing-geoclaw-results-in-google-earth"]], "Basic requirements": [[55, "basic-requirements"]], "Optional GDAL library": [[55, "optional-gdal-library"]], "An example : The Chile 2010 tsunami event": [[55, "an-example-the-chile-2010-tsunami-event"]], "Plotting attributes needed for Google Earth": [[55, "plotting-attributes-needed-for-google-earth"]], "plotdata attributes": [[55, "plotdata-attributes"]], "plotfigure attributes": [[55, "plotfigure-attributes"]], "Creating the figures": [[55, "creating-the-figures"]], "plotaxes attributes": [[55, "plotaxes-attributes"]], "plotitem attributes": [[55, "plotitem-attributes"]], "Adding a colorbar overlay": [[55, "adding-a-colorbar-overlay"]], "Gauge plots": [[55, "gauge-plots"]], "Additional plotdata attributes": [[55, "additional-plotdata-attributes"]], "Plotting tips": [[55, "plotting-tips"]], "KML and KMZ files": [[55, "kml-and-kmz-files"]], "Tiling images for faster loading": [[55, "tiling-images-for-faster-loading"]], "Removing aliasing artifacts": [[55, "removing-aliasing-artifacts"]], "Creating multiple figures at different resolutions": [[55, "creating-multiple-figures-at-different-resolutions"]], "Mapping topography data to latitude/longitude coordinates": [[55, "mapping-topography-data-to-latitude-longitude-coordinates"]], "Publishing your results": [[55, "id1"]], "Using the GPU version of Clawpack": [[56, "using-the-gpu-version-of-clawpack"]], "Grid registration": [[57, "grid-registration"]], "NetCDF files": [[57, "netcdf-files"]], "Guide for updating this documentation": [[58, "guide-for-updating-this-documentation"]], "Git branches and tags": [[58, "git-branches-and-tags"]], "Configuration and style files": [[58, "configuration-and-style-files"]], "Updating the docs for a new release": [[58, "updating-the-docs-for-a-new-release"]], "To generate docs including previous versions": [[58, "to-generate-docs-including-previous-versions"]], "Updating for a new major version": [[58, "updating-for-a-new-major-version"]], "Updating the gallery": [[58, "updating-the-gallery"]], "Updating the webpages": [[58, "updating-the-webpages"]], "Extra files for webpages not built by Sphinx": [[58, "extra-files-for-webpages-not-built-by-sphinx"]], "Pages from other clawpack repositories": [[58, "pages-from-other-clawpack-repositories"]], "Guide for doing a Clawpack release": [[59, "guide-for-doing-a-clawpack-release"]], "Preparation": [[59, "preparation"]], "Version numbers": [[59, "version-numbers"]], "Release candidates": [[59, "release-candidates"]], "Create a tar file and a Github release": [[59, "create-a-tar-file-and-a-github-release"]], "Final release": [[59, "final-release"]], "Pypi": [[59, "pypi"]], "Zenodo": [[59, "zenodo"]], "Open Science Framework (OSF)": [[59, "open-science-framework-osf"]], "Updating the documentation": [[59, "updating-the-documentation"]], "Updating the apps repository": [[59, "updating-the-apps-repository"]], "Updating the Dockerfile": [[59, "updating-the-dockerfile"]], "Installing Clawpack": [[60, "installing-clawpack"]], "Next steps:": [[60, "next-steps"], [61, "next-steps"], [62, "next-steps"]], "Options for installing Clawpack Fortran codes": [[61, "options-for-installing-clawpack-fortran-codes"]], "tar file": [[61, "tar-file"]], "git clone": [[61, "git-clone"]], "pip install instructions": [[62, "pip-install-instructions"]], "Quick Installation of PyClaw with pip": [[62, "quick-installation-of-pyclaw-with-pip"]], "Quick Installation of all packages with pip": [[62, "quick-installation-of-all-packages-with-pip"]], "Using pip to install a different version": [[62, "using-pip-to-install-a-different-version"]], "Experimenting with code in the examples directories": [[62, "experimenting-with-code-in-the-examples-directories"]], "Troubleshooting pip install": [[62, "troubleshooting-pip-install"]], "kmltools module of utility functions": [[63, "kmltools-module-of-utility-functions"]], "Lagrangian gauges for particle tracking": [[64, "lagrangian-gauges-for-particle-tracking"]], "Specifying Lagrangian Gauges": [[64, "specifying-lagrangian-gauges"]], "Visclaw tools for plotting": [[64, "visclaw-tools-for-plotting"]], "An alternative using fgout grids": [[64, "an-alternative-using-fgout-grids"]], "Clawpack Makefiles": [[66, "clawpack-makefiles"]], "Applications directory Makefiles": [[66, "applications-directory-makefiles"]], "output": [[66, "output"]], "plots": [[66, "plots"]], "Variables": [[66, "variables"]], "Compiler flags": [[66, "compiler-flags"]], "Duplicate Base Source Name": [[66, "duplicate-base-source-name"]], "Library routines in Makefiles": [[67, "library-routines-in-makefiles"]], "Replacing files with the same name as library files": [[67, "replacing-files-with-the-same-name-as-library-files"]], "Using a modified library routine with a different name": [[67, "using-a-modified-library-routine-with-a-different-name"]], "Manning friction term": [[68, "manning-friction-term"]], "The mapc2p function": [[69, "the-mapc2p-function"]], "Marching Front algorithm": [[70, "marching-front-algorithm"]], "Function arguments": [[70, "function-arguments"]], "output array": [[70, "output-array"]], "creating a masked array": [[70, "creating-a-masked-array"]], "topofile mask for initializing dry points": [[70, "topofile-mask-for-initializing-dry-points"]], "fgmax points": [[70, "fgmax-points"]], "flag regions": [[70, "flag-regions"]], "The mask argument": [[70, "the-mask-argument"]], "The previous_pts_chosen argument": [[70, "the-previous-pts-chosen-argument"]], "Finding all points below a given elevation": [[70, "finding-all-points-below-a-given-elevation"]], "Create a buffer zone along shore": [[70, "create-a-buffer-zone-along-shore"]], "Choose points only near shore": [[70, "choose-points-only-near-shore"]], "Write out the masked array indicating fgmax points": [[70, "write-out-the-masked-array-indicating-fgmax-points"]], "Creating an AMR flag region": [[70, "creating-an-amr-flag-region"]], "Determining dry areas below MHW": [[70, "determining-dry-areas-below-mhw"]], "Plotting using Matlab": [[71, "plotting-using-matlab"]], "The Matlab search path": [[71, "the-matlab-search-path"]], "Creating output files": [[71, "creating-output-files"]], "The plotclaw command": [[71, "the-plotclaw-command"]], "The setplot file": [[71, "the-setplot-file"]], "The afterframe file": [[71, "the-afterframe-file"]], "Getting help": [[71, "getting-help"]], "Trouble shooting": [[71, "trouble-shooting"]], "Output files not found": [[71, "output-files-not-found"]], "MaxFrames not set": [[71, "maxframes-not-set"]], "Switching examples": [[71, "switching-examples"]], "Matlab Gallery": [[71, "matlab-gallery"]], "Nearshore interpolation": [[72, "nearshore-interpolation"]], "Using NetCDF output": [[73, "using-netcdf-output"]], "Creating a new application directory": [[74, "creating-a-new-application-directory"]], "Copying an existing example": [[74, "copying-an-existing-example"]], "Earthquake sources: Fault slip and the Okada model": [[75, "earthquake-sources-fault-slip-and-the-okada-model"]], "Fault slip on rectangular subfaults": [[75, "fault-slip-on-rectangular-subfaults"]], "Okada model": [[75, "okada-model"]], "Kinematic rupture": [[75, "kinematic-rupture"]], "Fault slip on triangular subfaults": [[75, "fault-slip-on-triangular-subfaults"]], "Using OpenMP": [[76, "using-openmp"]], "Using OpenMP with AMR": [[76, "using-openmp-with-amr"]], "Fixed grid output in GeoClaw": [[76, "fixed-grid-output-in-geoclaw"]], "Output data sytles and formats": [[77, "output-data-sytles-and-formats"]], "Output style": [[77, "output-style"]], "Output data formats": [[77, "output-data-formats"]], "ASCII output data format": [[77, "ascii-output-data-format"]], "fort.t0002": [[77, "fort-t0002"]], "fort.q0002": [[77, "fort-q0002"]], "Raw binary output data formats": [[77, "raw-binary-output-data-formats"]], "NetCDF output data format": [[77, "netcdf-output-data-format"]], "Output of aux arrays": [[77, "output-of-aux-arrays"]], "Which Clawpack solver should I use?": [[78, "which-clawpack-solver-should-i-use"]], "Installation and user interface": [[78, "installation-and-user-interface"]], "Algorithmic differences": [[78, "algorithmic-differences"]], "Parallel computing": [[78, "parallel-computing"]], "Clawpack Community Photos": [[79, "clawpack-community-photos"]], "2016 Developers\u2019 workshop at University of Washington": [[79, "id1"]], "2015 Developers\u2019 workshop at University of Utah": [[79, "id2"]], "2014 HPC3 workshop at KAUST": [[79, "id3"]], "2013 Claw-Dev workshop at UW": [[79, "id4"]], "2012 HPC3 workshop at KAUST": [[79, "id6"]], "2011 coding sprints at UW": [[79, "coding-sprints-at-uw"]], "2010 GeoClaw hacking UW": [[79, "geoclaw-hacking-uw"]], "Plotting examples": [[80, "plotting-examples"]], "Plotting with Visclaw": [[81, "plotting-with-visclaw"]], "Plotting as post-processing": [[81, "plotting-as-post-processing"]], "Plotting on the fly": [[81, "plotting-on-the-fly"]], "Plotting hints and FAQ": [[82, "plotting-hints-and-faq"]], "What\u2019s the difference between make .plots and make plots ?": [[82, "what-s-the-difference-between-make-plots-and-make-plots"]], "How to plot a something other than a component of q?": [[82, "how-to-plot-a-something-other-than-a-component-of-q"]], "How to add another curve to a plot, e.g. the true solution?": [[82, "how-to-add-another-curve-to-a-plot-e-g-the-true-solution"]], "How to change the title in a plot?": [[82, "how-to-change-the-title-in-a-plot"]], "How to specify outdir, the directory to find fort.* files for plotting?": [[82, "how-to-specify-outdir-the-directory-to-find-fort-files-for-plotting"]], "How to specify a different outdir for some plot item?": [[82, "how-to-specify-a-different-outdir-for-some-plot-item"]], "How to set plot parameters that are not provided as attributes of ClawPlotItem?": [[82, "how-to-set-plot-parameters-that-are-not-provided-as-attributes-of-clawplotitem"]], "How to change the size or background color of a figure?": [[82, "how-to-change-the-size-or-background-color-of-a-figure"]], "Specifying colormaps for pcolor or contourf plots": [[82, "specifying-colormaps-for-pcolor-or-contourf-plots"]], "How to debug setplot.py?": [[82, "how-to-debug-setplot-py"]], "Plotting routines for GeoClaw": [[83, "plotting-routines-for-geoclaw"]], "Plotting options in Python": [[84, "plotting-options-in-python"]], "Producing html plots from the command line": [[84, "producing-html-plots-from-the-command-line"]], "Producing a latex file with plots from the command line": [[84, "producing-a-latex-file-with-plots-from-the-command-line"]], "Setting plot parameters with a setplot function": [[84, "setting-plot-parameters-with-a-setplot-function"]], "Interactive plotting with Iplotclaw": [[84, "interactive-plotting-with-iplotclaw"]], "Access to current_data": [[84, "access-to-current-data"]], "printframes": [[84, "printframes"]], "Specifying what and how to plot": [[84, "specifying-what-and-how-to-plot"]], "Installation Prerequisites": [[85, "installation-prerequisites"]], "Operating system": [[85, "operating-system"]], "Fortran": [[85, "fortran"]], "Python": [[85, "python"]], "pip": [[85, "pip"]], "Git": [[85, "git"]], "About PyClaw": [[86, "about-pyclaw"]], "Contributors": [[86, "contributors"]], "PyClaw Basics": [[87, "pyclaw-basics"]], "Understanding Pyclaw Classes": [[88, "understanding-pyclaw-classes"]], "Flow of a Pyclaw Simulation": [[88, "flow-of-a-pyclaw-simulation"]], "Creation of a Pyclaw Solution": [[88, "creation-of-a-pyclaw-solution"]], "Creation of a Pyclaw Solver": [[88, "creation-of-a-pyclaw-solver"]], "Creating and Running a Simulation with Controller": [[88, "creating-and-running-a-simulation-with-controller"]], "Restarting a simulation": [[88, "restarting-a-simulation"]], "Outputting aux values": [[88, "outputting-aux-values"]], "Outputting derived quantities": [[88, "outputting-derived-quantities"], [98, "outputting-derived-quantities"]], "Porting a problem from Clawpack 4.6.x to PyClaw": [[89, "porting-a-problem-from-clawpack-4-6-x-to-pyclaw"]], "Running PyClaw in the cloud": [[90, "running-pyclaw-in-the-cloud"]], "Sage Math Cloud": [[90, "sage-math-cloud"]], "Pyclaw Controller Class": [[91, "pyclaw-controller-class"]], "pyclaw.controller.Controller": [[91, "pyclaw-controller-controller"]], "Pyclaw Limiters": [[92, "pyclaw-limiters"]], "clawpack.pyclaw.limiters.tvd": [[92, "module-clawpack.pyclaw.limiters.tvd"]], "CFL Independent Limiters": [[92, "cfl-independent-limiters"]], "CFL Dependent Limiters": [[92, "cfl-dependent-limiters"]], "Working with PyClaw\u2019s built-in examples": [[93, "working-with-pyclaw-s-built-in-examples"]], "Running and plotting examples": [[93, "running-and-plotting-examples"]], "Interactively in IPython": [[93, "interactively-in-ipython"]], "Built-in examples": [[93, "built-in-examples"]], "Adding new examples": [[93, "adding-new-examples"]], "PyClaw Geometry": [[94, "pyclaw-geometry"]], "Serial Geometry Objects": [[94, "serial-geometry-objects"]], "pyclaw.geometry.Domain": [[94, "pyclaw-geometry-domain"]], "pyclaw.geometry.Patch": [[94, "pyclaw-geometry-patch"]], "pyclaw.geometry.Grid": [[94, "pyclaw-geometry-grid"]], "pyclaw.geometry.Dimension": [[94, "pyclaw-geometry-dimension"]], "Parallel Geometry Objects": [[94, "parallel-geometry-objects"]], "petclaw.geometry.Domain": [[94, "petclaw-geometry-domain"]], "petclaw.geometry.Patch": [[94, "petclaw-geometry-patch"]], "Going Further": [[95, "going-further"]], "PyClaw installation": [[96, "pyclaw-installation"]], "Features": [[96, "features"]], "PyClaw Documentation": [[96, "pyclaw-documentation"]], "PyClaw Modules reference documentation": [[96, "pyclaw-modules-reference-documentation"]], "Riemann Solvers reference documentation": [[96, "riemann-solvers-reference-documentation"]], "Indices and tables": [[96, "indices-and-tables"]], "Citing PyClaw": [[96, "citing-pyclaw"]], "Pyclaw Input/Output Package": [[97, "pyclaw-input-output-package"]], "pyclaw.fileio.ascii": [[97, "module-clawpack.pyclaw.fileio.ascii"]], "pyclaw.fileio.binary": [[97, "module-clawpack.pyclaw.fileio.binary"]], "pyclaw.fileio.hdf5": [[97, "module-clawpack.pyclaw.fileio.hdf5"]], "pyclaw.fileio.netcdf": [[97, "module-clawpack.pyclaw.fileio.netcdf"]], "PyClaw output": [[98, "pyclaw-output"]], "Output frames": [[98, "output-frames"]], "When output is saved/written": [[98, "when-output-is-saved-written"]], "Where and how output is written": [[98, "where-and-how-output-is-written"]], "What output is written": [[98, "what-output-is-written"]], "Outputting functionals": [[98, "outputting-functionals"]], "Using gauges": [[98, "using-gauges"]], "Logging": [[98, "logging"]], "Running in parallel": [[99, "running-in-parallel"]], "Installing PETSc": [[99, "installing-petsc"]], "Testing your installation": [[99, "testing-your-installation"], [160, "testing-your-installation"]], "Running and plotting an example": [[99, "running-and-plotting-an-example"]], "Tips for making your application run correctly in parallel": [[99, "tips-for-making-your-application-run-correctly-in-parallel"]], "Passing options to PETSc": [[99, "passing-options-to-petsc"]], "Plotting PyClaw results": [[100, "plotting-pyclaw-results"]], "Basics": [[100, "basics"]], "Plotting result from parallel runs": [[100, "plotting-result-from-parallel-runs"]], "Setting up your own problem": [[101, "setting-up-your-own-problem"]], "Writing the initialization script": [[101, "writing-the-initialization-script"]], "Setting initial conditions": [[101, "setting-initial-conditions"]], "Setting auxiliary variables": [[101, "setting-auxiliary-variables"]], "Setting boundary conditions": [[101, "setting-boundary-conditions"]], "Setting solver options": [[101, "setting-solver-options"]], "Using your own Riemann solver": [[101, "using-your-own-riemann-solver"]], "Adding source terms": [[101, "adding-source-terms"]], "Setting up the Makefile": [[101, "setting-up-the-makefile"]], "Riemann Solver Package": [[102, "riemann-solver-package"]], "Acoustics": [[102, "acoustics"]], "Advection": [[102, "advection"]], "Burgers Equation": [[102, "burgers-equation"]], "Euler Equations": [[102, "euler-equations"]], "Shallow Water Equations": [[102, "shallow-water-equations"]], "PyClaw Solutions": [[103, "pyclaw-solutions"]], "pyclaw.solution.Solution": [[103, "pyclaw-solution-solution"]], "Using PyClaw\u2019s solvers: Classic and SharpClaw": [[104, "using-pyclaw-s-solvers-classic-and-sharpclaw"]], "SharpClaw Solvers": [[104, "sharpclaw-solvers"]], "pyclaw.sharpclaw": [[104, "pyclaw-sharpclaw"]], "Pyclaw Classic Clawpack Solvers": [[104, "pyclaw-classic-clawpack-solvers"]], "pyclaw.classic.solver": [[104, "pyclaw-classic-solver"]], "Change to Custom BC Function Signatures": [[104, "change-to-custom-bc-function-signatures"]], "Installing PyClaw": [[105, "installing-pyclaw"]], "Dependencies: Python, gfortran, numpy, and matplotlib": [[105, "dependencies-python-gfortran-numpy-and-matplotlib"]], "Obtaining Python, numpy, and matplotlib": [[105, "obtaining-python-numpy-and-matplotlib"]], "Clawpack": [[105, "clawpack"]], "Testing your installation with nose": [[105, "testing-your-installation-with-nose"]], "Next steps": [[105, "next-steps"]], "PyClaw State": [[106, "pyclaw-state"]], "Serial pyclaw.state.State": [[106, "serial-pyclaw-state-state"]], "Parallel petclaw.state.State": [[106, "parallel-petclaw-state-state"]], "Troubleshooting": [[107, "troubleshooting"], [165, "troubleshooting"]], "Compilation errors": [[107, "compilation-errors"]], "Use Fortran-ordered arrays": [[107, "use-fortran-ordered-arrays"]], "Installation": [[107, "installation"]], "PyClaw tutorial: Solve the acoustics equations": [[108, "pyclaw-tutorial-solve-the-acoustics-equations"]], "The Solver": [[108, "the-solver"]], "The domain": [[108, "the-domain"]], "Initial condition": [[108, "initial-condition"]], "Problem-specific parameters": [[108, "problem-specific-parameters"]], "The controller": [[108, "the-controller"]], "Pyclaw Utility Module": [[109, "pyclaw-utility-module"]], "pyclaw.util": [[109, "module-clawpack.pyclaw.util"]], "Python Hints": [[110, "python-hints"]], "Dropping support for Python 2.7": [[110, "dropping-support-for-python-2-7"]], "References and tutorials": [[110, "references-and-tutorials"]], "Notebooks": [[110, "notebooks"]], "Python path": [[111, "python-path"]], "whichclaw.py": [[111, "whichclaw-py"]], "Which version was imported?": [[111, "which-version-was-imported"]], "sys.path": [[111, "sys-path"]], "easy-install.pth": [[111, "easy-install-pth"]], "PYTHONPATH": [[111, "pythonpath"], [146, "pythonpath"]], "qinit default routines": [[112, "qinit-default-routines"]], "qinit routine in GeoClaw": [[112, "qinit-routine-in-geoclaw"]], "Quick start guide for storm surge modeling": [[113, "quick-start-guide-for-storm-surge-modeling"]], "Quick start guide for tsunami modeling": [[114, "quick-start-guide-for-tsunami-modeling"]], "AMR refinement criteria": [[115, "amr-refinement-criteria"]], "Flagging criteria": [[115, "flagging-criteria"]], "flag2refine": [[115, "flag2refine"]], "Richardson extrapolation": [[115, "richardson-extrapolation"]], "Specifying AMR regions": [[115, "specifying-amr-regions"]], "Implementation": [[115, "implementation"]], "Flagging criteria in GeoClaw": [[115, "flagging-criteria-in-geoclaw"]], "Regression testing": [[116, "regression-testing"]], "Running the tests": [[116, "running-the-tests"], [116, "id2"]], "Fortran codes": [[116, "fortran-codes"]], "Travis continuous integration": [[116, "travis-continuous-integration"]], "Diff tools for checking test output": [[116, "diff-tools-for-checking-test-output"]], "chardiff tool for line-by-line comparison of output files": [[116, "chardiff-tool-for-line-by-line-comparison-of-output-files"]], "imagediff tool for pixel comparison of plots": [[116, "imagediff-tool-for-pixel-comparison-of-plots"]], "Running and writing tests in PyClaw": [[116, "running-and-writing-tests-in-pyclaw"]], "Running serial tests simultaneously": [[116, "running-serial-tests-simultaneously"]], "Running a specific test": [[116, "running-a-specific-test"]], "Doctests": [[116, "doctests"]], "Writing New Tests": [[116, "writing-new-tests"]], "v5.0.0 release notes": [[117, "v5-0-0-release-notes"]], "Changes to classic, riemann, amrclaw, geoclaw, visclaw": [[117, "changes-to-classic-riemann-amrclaw-geoclaw-visclaw"]], "v5.10.0 release notes": [[118, "v5-10-0-release-notes"]], "v5.1.0 release notes": [[119, "v5-1-0-release-notes"]], "v5.2.0 release notes": [[120, "v5-2-0-release-notes"]], "v5.2.1 release notes": [[121, "v5-2-1-release-notes"]], "v5.2.2 release notes": [[122, "v5-2-2-release-notes"]], "v5.3.0 release notes": [[123, "v5-3-0-release-notes"]], "v5.3.1 release notes": [[124, "v5-3-1-release-notes"]], "v5.4.0 release notes": [[125, "v5-4-0-release-notes"]], "Global changes": [[125, "global-changes"]], "v5.4.1 release notes": [[126, "v5-4-1-release-notes"]], "Changes to documentation": [[126, "changes-to-documentation"], [127, "changes-to-documentation"]], "v5.5.0 release notes": [[127, "v5-5-0-release-notes"]], "v5.6.0 release notes": [[128, "v5-6-0-release-notes"]], "v5.6.1 release notes": [[129, "v5-6-1-release-notes"]], "v5.7.0 release notes": [[130, "v5-7-0-release-notes"]], "Python support": [[130, "python-support"]], "v5.7.1 release notes": [[131, "v5-7-1-release-notes"]], "v5.8.0 release notes": [[132, "v5-8-0-release-notes"]], "v5.8.1 release notes": [[133, "v5-8-1-release-notes"]], "v5.8.2 release notes": [[134, "v5-8-2-release-notes"]], "v5.9.0 release notes": [[135, "v5-9-0-release-notes"]], "v5.9.1 release notes": [[136, "v5-9-1-release-notes"]], "v5.9.2 release notes": [[137, "v5-9-2-release-notes"]], "Releases of Clawpack and release notes": [[138, "releases-of-clawpack-and-release-notes"]], "Other notes:": [[138, "other-notes"]], "Releases:": [[138, "id1"]], "Clawpack 4.x": [[138, "clawpack-4-x"]], "Checkpointing and restarting": [[139, "checkpointing-and-restarting"]], "Checkpointing a computation": [[139, "checkpointing-a-computation"]], "Restarting a computation": [[139, "restarting-a-computation"]], "Modifying the Makefile for a restart": [[139, "modifying-the-makefile-for-a-restart"]], "Output files after a restart": [[139, "output-files-after-a-restart"]], "Riemann solvers": [[140, "riemann-solvers"]], "One-dimensional Riemann solver": [[140, "one-dimensional-riemann-solver"]], "Pointwise Riemann solvers": [[140, "pointwise-riemann-solvers"]], "f-wave Riemann solvers": [[140, "f-wave-riemann-solvers"]], "2D Riemann solvers": [[140, "d-riemann-solvers"]], "Using a custom solver": [[140, "using-a-custom-solver"]], "Adding a solver to the Riemann repository": [[140, "adding-a-solver-to-the-riemann-repository"]], "Shallow water Riemann solvers in Clawpack": [[141, "shallow-water-riemann-solvers-in-clawpack"]], "One dimension": [[141, "one-dimension"]], "Two dimensions": [[141, "two-dimensions"]], "Layered shallow water equations": [[141, "layered-shallow-water-equations"]], "Potentially useful contributions (what\u2019s missing)": [[141, "potentially-useful-contributions-whats-missing"]], "Demonstrations": [[141, "demonstrations"]], "Roe": [[141, "roe"]], "HLL": [[141, "hll"]], "Ruled Rectangles": [[142, "ruled-rectangles"]], "Relation to convex polygons": [[142, "relation-to-convex-polygons"]], "Other attributes and methods": [[142, "other-attributes-and-methods"]], "ds": [[142, "ds"]], "slu": [[142, "slu"]], "bounding_box": [[142, "bounding-box"]], "mask_outside": [[142, "mask-outside"]], "read and write, and instantiating from a file": [[142, "read-and-write-and-instantiating-from-a-file"]], "make_kml": [[142, "make-kml"]], "A GeoClaw AMR flag region": [[142, "a-geoclaw-amr-flag-region"]], "A simple rectangle": [[142, "a-simple-rectangle"]], "Defining a Ruled Rectangle covering selected cells": [[142, "defining-a-ruled-rectangle-covering-selected-cells"]], "Example covering the continental shelf": [[142, "example-covering-the-continental-shelf"]], "Setting sea_level": [[143, "setting-sea-level"]], "Set Eta Init \u2013 spatially varying initial surface elevation": [[144, "set-eta-init-spatially-varying-initial-surface-elevation"]], "Default behavior, adjusting sea level by seismic deformation": [[144, "default-behavior-adjusting-sea-level-by-seismic-deformation"]], "Other use cases": [[144, "other-use-cases"]], "setaux default routines": [[145, "setaux-default-routines"]], "setaux routine in GeoClaw": [[145, "setaux-routine-in-geoclaw"]], "Set environment variables": [[146, "set-environment-variables"]], "CLAW": [[146, "claw"]], "FC": [[146, "fc"]], "Using setplot.py to specify the desired plots": [[147, "using-setplot-py-to-specify-the-desired-plots"]], "Plotting Data Objects": [[147, "plotting-data-objects"]], "Overview": [[147, "overview"]], "Specifying classic run-time parameters in setrun.py": [[148, "specifying-classic-run-time-parameters-in-setrun-py"]], "Input": [[148, "input"], [149, "input"]], "Output": [[148, "output"], [149, "output"]], "Run-time parameters": [[148, "run-time-parameters"], [149, "run-time-parameters"]], "Specifying AMRClaw run-time parameters in setrun.py": [[149, "specifying-amrclaw-run-time-parameters-in-setrun-py"]], "Special AMR parameters": [[149, "special-amr-parameters"]], "Debugging flags for additional printing": [[149, "debugging-flags-for-additional-printing"]], "Sample setrun.py module for AMRClaw": [[150, "sample-setrun-py-module-for-amrclaw"]], "Specifying GeoClaw parameters in setrun.py": [[151, "specifying-geoclaw-parameters-in-setrun-py"]], "Additional AMR parameters": [[151, "additional-amr-parameters"]], "General geo parameters": [[151, "general-geo-parameters"]], "Topography data file parameters": [[151, "topography-data-file-parameters"]], "qinit data file parameters": [[151, "qinit-data-file-parameters"]], "Force some cells to be initially dry": [[151, "force-some-cells-to-be-initially-dry"]], "Adjust sea level in some regions": [[151, "adjust-sea-level-in-some-regions"]], "AMR refinement region parameters": [[151, "amr-refinement-region-parameters"]], "Deprecated Fixedgrid output parameters": [[151, "deprecated-fixedgrid-output-parameters"]], "Fixed grid maximum monitoring / arrival times": [[151, "fixed-grid-maximum-monitoring-arrival-times"]], "Fixed grid output": [[151, "fixed-grid-output"]], "Storm Specification Data": [[151, "storm-specification-data"]], "Sample setrun.py module for classic Clawpack": [[152, "sample-setrun-py-module-for-classic-clawpack"]], "Saving and sharing results": [[153, "saving-and-sharing-results"]], "Making webpages of plots": [[153, "making-webpages-of-plots"]], "Sharing your results": [[153, "sharing-your-results"]], "Jupyter notebooks": [[153, "jupyter-notebooks"]], "Source terms for shallow water on the sphere": [[154, "source-terms-for-shallow-water-on-the-sphere"]], "Compiling the Sphinx documentation locally": [[155, "compiling-the-sphinx-documentation-locally"]], "src1d default routines": [[156, "src1d-default-routines"]], "src1d routine in GeoClaw": [[156, "src1d-routine-in-geoclaw"]], "src default routines": [[157, "src-default-routines"]], "src routine in GeoClaw": [[157, "src-routine-in-geoclaw"]], "Storm Specification Class and Tools": [[158, "storm-specification-class-and-tools"]], "Sources for Storm Surge Data": [[159, "sources-for-storm-surge-data"]], "Timing Statistics": [[161, "timing-statistics"]], "Topography data": [[162, "topography-data"]], "Downloading topography files": [[162, "downloading-topography-files"]], "NetCDF format": [[162, "netcdf-format"]], "Topography displacement files": [[162, "topography-displacement-files"]], "qinit data file": [[162, "qinit-data-file"]], "Python tools for working with topo and dtopo": [[163, "python-tools-for-working-with-topo-and-dtopo"]], "topotools module for working with topography data": [[164, "topotools-module-for-working-with-topography-data"]], "Troubleshooting Installation": [[165, "troubleshooting-installation"]], "Troubleshooting Fortran:": [[165, "troubleshooting-fortran"]], "Setting the Fortran compiler to be used by f2py (pip)": [[165, "setting-the-fortran-compiler-to-be-used-by-f2py-pip"]], "Trouble compiling Fortran code at the command line": [[165, "trouble-compiling-fortran-code-at-the-command-line"]], "Trouble running \u201cmake .exe\u201d": [[165, "trouble-running-make-exe"]], "Trouble running \u201cmake .data\u201d": [[165, "trouble-running-make-data"]], "Trouble running \u201cmake .output\u201d": [[165, "trouble-running-make-output"]], "Trouble running \u201cmake .plots\u201d": [[165, "trouble-running-make-plots"]], "Some sources of tsunami data": [[166, "some-sources-of-tsunami-data"]], "Topography / bathymetry": [[166, "topography-bathymetry"]], "Earthquake source models": [[166, "earthquake-source-models"]], "DART buoy data": [[166, "dart-buoy-data"]], "Tide gauges": [[166, "tide-gauges"]], "User files required for the Fortran code": [[167, "user-files-required-for-the-fortran-code"]], "Specifying the initial conditions": [[167, "specifying-the-initial-conditions"]], "Specifying the Riemann solver": [[167, "specifying-the-riemann-solver"]], "Specifying boundary conditions": [[167, "specifying-boundary-conditions"]], "Specifying problem-specific data": [[167, "specifying-problem-specific-data"]], "Specifying spatially-varying data using setaux": [[167, "specifying-spatially-varying-data-using-setaux"]], "Using b4step for work to be done before each time step": [[167, "using-b4step-for-work-to-be-done-before-each-time-step"]], "Using src for source terms": [[167, "using-src-for-source-terms"]], "Using src1d for source terms with AMRClaw": [[167, "using-src1d-for-source-terms-with-amrclaw"]], "Plotting with VisIt": [[168, "plotting-with-visit"]], "Clawpack Virtual Machine": [[169, "clawpack-virtual-machine"]], "Wave-propagation algorithms": [[170, "wave-propagation-algorithms"]], "One space dimension": [[170, "one-space-dimension"]], "Godunov\u2019s method": [[170, "godunov-s-method"]], "High-resolution methods": [[170, "high-resolution-methods"]], "f-wave formulation": [[170, "f-wave-formulation"]], "Capacity functions": [[170, "capacity-functions"]], "Source terms": [[170, "source-terms"]]}, "indexentries": {"clawplotaxes (built-in class)": [[0, "ClawPlotAxes"]], "gethandle()": [[0, "gethandle"], [2, "gethandle"], [3, "gethandle"]], "new_plotitem()": [[0, "new_plotitem"]], "clawplotdata (built-in class)": [[1, "ClawPlotData"]], "clearfigures()": [[1, "clearfigures"]], "clearframes()": [[1, "clearframes"]], "getaxes()": [[1, "getaxes"]], "getfigure()": [[1, "getfigure"]], "getframe()": [[1, "getframe"], [3, "getframe"]], "getitem()": [[1, "getitem"]], "iplotclaw()": [[1, "iplotclaw"]], "new_plotfigure()": [[1, "new_plotfigure"]], "plotframe()": [[1, "plotframe"]], "printframes()": [[1, "printframes"]], "showitems()": [[1, "showitems"]], "clawplotfigure (built-in class)": [[2, "ClawPlotFigure"]], "new_plotaxes()": [[2, "new_plotaxes"]], "clawplotitem (built-in class)": [[3, "ClawPlotItem"]], "csvfault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.CSVFault"]], "dtopography (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.DTopography"]], "dtopography1d (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.DTopography1d"]], "fault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.Fault"]], "fault1d (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.Fault1d"]], "mo() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.Mo"]], "mo() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.Mo"]], "mw() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.Mw"]], "mw() (in module clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.Mw"]], "siftfault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.SiftFault"]], "subfault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.SubFault"]], "subfault1d (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d"]], "subdividedplanefault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.SubdividedPlaneFault"]], "tensorproductfault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.TensorProductFault"]], "ucsbfault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.UCSBFault"]], "calculate_geometry() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.calculate_geometry"]], "calculate_geometry_triangles() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.calculate_geometry_triangles"]], "centers (clawpack.geoclaw.dtopotools.subfault property)": [[32, "clawpack.geoclaw.dtopotools.SubFault.centers"]], "clawpack.geoclaw.dtopotools": [[32, "module-clawpack.geoclaw.dtopotools"]], "containing_rect() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.containing_rect"]], "convert_to_standard_units() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.convert_to_standard_units"]], "coordinate_specification (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.coordinate_specification"]], "coordinate_specification (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.coordinate_specification"]], "corners (clawpack.geoclaw.dtopotools.subfault property)": [[32, "clawpack.geoclaw.dtopotools.SubFault.corners"]], "create_dtopo_xy() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.create_dtopo_xy"]], "create_dtopography() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.create_dtopography"]], "dz_at_t() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.dZ_at_t"]], "dz_at_t() (clawpack.geoclaw.dtopotools.dtopography1d method)": [[32, "clawpack.geoclaw.dtopotools.DTopography1d.dZ_at_t"]], "dz_cellave_at_t() (clawpack.geoclaw.dtopotools.dtopography1d method)": [[32, "clawpack.geoclaw.dtopotools.DTopography1d.dZ_cellave_at_t"]], "dz_max() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.dZ_max"]], "depth (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.depth"]], "dip (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.dip"]], "dynamic_slip() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.dynamic_slip"]], "gauss_pts (clawpack.geoclaw.dtopotools.subfault property)": [[32, "clawpack.geoclaw.dtopotools.SubFault.gauss_pts"]], "latitude (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.latitude"]], "latitude (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.latitude"]], "length (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.length"]], "length (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.length"]], "longitude (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.longitude"]], "longitude (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.longitude"]], "module": [[32, "module-clawpack.geoclaw.dtopotools"], [35, "module-clawpack.geoclaw.fgmax_tools"], [37, "module-clawpack.geoclaw.fgout_tools"], [51, "module-clawpack.geoclaw.util"], [63, "module-clawpack.geoclaw.kmltools"], [92, "module-clawpack.pyclaw.limiters.tvd"], [97, "module-clawpack.pyclaw.fileio.ascii"], [97, "module-clawpack.pyclaw.fileio.binary"], [97, "module-clawpack.pyclaw.fileio.hdf5"], [97, "module-clawpack.pyclaw.fileio.netcdf"], [102, "module-clawpack.riemann.acoustics_1D_py"], [102, "module-clawpack.riemann.advection_1D_py"], [102, "module-clawpack.riemann.burgers_1D_py"], [102, "module-clawpack.riemann.euler_1D_py"], [102, "module-clawpack.riemann.shallow_1D_py"], [109, "module-clawpack.pyclaw.util"], [158, "module-clawpack.geoclaw.surge.storm"], [164, "module-clawpack.geoclaw.topotools"]], "mu (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.mu"]], "okada() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.okada"]], "plot_dz_colors() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.plot_dZ_colors"]], "plot_dz_colors() (in module clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.plot_dZ_colors"]], "plot_dz_contours() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.plot_dZ_contours"]], "plot_dz_contours() (in module clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.plot_dZ_contours"]], "plot_subfaults() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.plot_subfaults"]], "plot_subfaults_depth() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.plot_subfaults_depth"]], "rake (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rake"]], "rake (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.rake"]], "read() (clawpack.geoclaw.dtopotools.csvfault method)": [[32, "clawpack.geoclaw.dtopotools.CSVFault.read"]], "read() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.read"]], "read() (clawpack.geoclaw.dtopotools.dtopography1d method)": [[32, "clawpack.geoclaw.dtopotools.DTopography1d.read"]], "read() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.read"]], "read() (clawpack.geoclaw.dtopotools.ucsbfault method)": [[32, "clawpack.geoclaw.dtopotools.UCSBFault.read"]], "rise_fraction() (in module clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.rise_fraction"]], "rise_shape (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rise_shape"]], "rise_time (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rise_time"]], "rise_time_starting (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rise_time_starting"]], "rupture_time (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rupture_time"]], "rupture_type (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rupture_type"]], "set_corners() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.set_corners"]], "set_dynamic_slip() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.set_dynamic_slip"]], "set_subfaults() (clawpack.geoclaw.dtopotools.siftfault method)": [[32, "clawpack.geoclaw.dtopotools.SiftFault.set_subfaults"]], "slip (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.slip"]], "strike (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.strike"]], "strike (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.strike"]], "strike_direction() (in module clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.strike_direction"]], "subdivide() (clawpack.geoclaw.dtopotools.subdividedplanefault method)": [[32, "clawpack.geoclaw.dtopotools.SubdividedPlaneFault.subdivide"]], "width (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.width"]], "write() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.write"]], "write() (clawpack.geoclaw.dtopotools.dtopography1d method)": [[32, "clawpack.geoclaw.dtopotools.DTopography1d.write"]], "write() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.write"]], "fgmaxgrid (class in clawpack.geoclaw.fgmax_tools)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid"]], "adjust_fgmax_1d() (in module clawpack.geoclaw.fgmax_tools)": [[35, "clawpack.geoclaw.fgmax_tools.adjust_fgmax_1d"]], "bounding_box() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.bounding_box"]], "clawpack.geoclaw.fgmax_tools": [[35, "module-clawpack.geoclaw.fgmax_tools"]], "interp_dz() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.interp_dz"]], "ps4_to_arrays() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.ps4_to_arrays"]], "read_fgmax_grids_data() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.read_fgmax_grids_data"]], "read_output() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.read_output"]], "write_to_fgmax_data() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.write_to_fgmax_data"]], "b (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.B"]], "fgoutframe (class in clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame"]], "fgoutgrid (class in clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid"]], "x (clawpack.geoclaw.fgout_tools.fgoutgrid property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.X"], [37, "clawpack.geoclaw.fgout_tools.FGoutGrid.x"]], "y (clawpack.geoclaw.fgout_tools.fgoutgrid property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.Y"], [37, "clawpack.geoclaw.fgout_tools.FGoutGrid.y"]], "clawpack.geoclaw.fgout_tools": [[37, "module-clawpack.geoclaw.fgout_tools"]], "eta (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.eta"]], "extent_centers (clawpack.geoclaw.fgout_tools.fgoutgrid property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.extent_centers"]], "extent_edges (clawpack.geoclaw.fgout_tools.fgoutgrid property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.extent_edges"]], "get_as_array() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.get_as_array"]], "h (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.h"]], "hss (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.hss"]], "hu (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.hu"]], "hv (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.hv"]], "make_fgout_fcn_xy() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.make_fgout_fcn_xy"]], "make_fgout_fcn_xyt() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.make_fgout_fcn_xyt"]], "print_netcdf_info() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.print_netcdf_info"]], "read_fgout_grids_data() (clawpack.geoclaw.fgout_tools.fgoutgrid method)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.read_fgout_grids_data"]], "read_frame() (clawpack.geoclaw.fgout_tools.fgoutgrid method)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.read_frame"]], "read_netcdf() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.read_netcdf"]], "read_netcdf_arrays() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.read_netcdf_arrays"]], "s (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.s"]], "set_plotdata() (clawpack.geoclaw.fgout_tools.fgoutgrid method)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.set_plotdata"]], "u (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.u"]], "v (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.v"]], "write_netcdf() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.write_netcdf"]], "write_to_fgout_data() (clawpack.geoclaw.fgout_tools.fgoutgrid method)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.write_to_fgout_data"]], "bearing() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.bearing"]], "clawpack.geoclaw.util": [[51, "module-clawpack.geoclaw.util"]], "dist_latlong2meters() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.dist_latlong2meters"]], "dist_meters2latlong() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.dist_meters2latlong"]], "dms2decimal() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.dms2decimal"]], "fetch_noaa_tide_data() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.fetch_noaa_tide_data"]], "gctransect() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.gctransect"]], "haversine() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.haversine"]], "inv_haversine() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.inv_haversine"]], "box2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.box2kml"]], "clawpack.geoclaw.kmltools": [[63, "module-clawpack.geoclaw.kmltools"]], "deg2dms() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.deg2dms"]], "dtopo2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.dtopo2kml"]], "f2s() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.f2s"]], "fgmax2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.fgmax2kml"]], "fgout2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.fgout2kml"]], "gauges2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.gauges2kml"]], "kml_build_colorbar() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.kml_build_colorbar"]], "kml_cb() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.kml_cb"]], "kml_png() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.kml_png"]], "kml_timespan() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.kml_timespan"]], "line2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.line2kml"]], "make_input_data_kmls() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.make_input_data_kmls"]], "pcolorcells_for_kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.pcolorcells_for_kml"]], "png2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.png2kml"]], "poly2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.poly2kml"]], "quad2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.quad2kml"]], "regions2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.regions2kml"]], "topo2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.topo2kml"]], "topo2kmz() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.topo2kmz"]], "transect2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.transect2kml"]], "controller (class in clawpack.pyclaw.controller)": [[91, "clawpack.pyclaw.controller.Controller"]], "f_file_name (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.F_file_name"]], "f_path (clawpack.pyclaw.controller.controller property)": [[91, "clawpack.pyclaw.controller.Controller.F_path"]], "check_validity() (clawpack.pyclaw.controller.controller method)": [[91, "clawpack.pyclaw.controller.Controller.check_validity"]], "compute_f (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.compute_F"]], "compute_p (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.compute_p"]], "file_prefix_p (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.file_prefix_p"]], "frames (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.frames"]], "keep_copy (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.keep_copy"]], "nstepout (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.nstepout"]], "num_output_times (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.num_output_times"]], "out_times (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.out_times"]], "outdir (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.outdir"]], "outdir_p (clawpack.pyclaw.controller.controller property)": [[91, "clawpack.pyclaw.controller.Controller.outdir_p"]], "output_file_prefix (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.output_file_prefix"]], "output_format (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.output_format"]], "output_options (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.output_options"]], "output_style (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.output_style"]], "overwrite (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.overwrite"]], "plot() (clawpack.pyclaw.controller.controller method)": [[91, "clawpack.pyclaw.controller.Controller.plot"]], "plotdata (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.plotdata"]], "run() (clawpack.pyclaw.controller.controller method)": [[91, "clawpack.pyclaw.controller.Controller.run"]], "rundir (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.rundir"]], "runmake (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.runmake"]], "savecode (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.savecode"]], "solver (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.solver"]], "tfinal (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.tfinal"]], "verbosity (clawpack.pyclaw.controller.controller property)": [[91, "clawpack.pyclaw.controller.Controller.verbosity"]], "viewable_attributes (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.viewable_attributes"]], "write_aux_always (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.write_aux_always"]], "write_aux_init (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.write_aux_init"]], "xclawcmd (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.xclawcmd"]], "xclawerr (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.xclawerr"]], "xclawout (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.xclawout"]], "xdir (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.xdir"]], "arora_roe() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.arora_roe"]], "beta_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.beta_limiter"]], "cada_torrilhon_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.cada_torrilhon_limiter"]], "cada_torrilhon_limiter_nonlinear() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.cada_torrilhon_limiter_nonlinear"]], "cfl_superbee() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.cfl_superbee"]], "cfl_superbee_theta() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.cfl_superbee_theta"]], "clawpack.pyclaw.limiters.tvd": [[92, "module-clawpack.pyclaw.limiters.tvd"]], "hyperbee_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.hyperbee_limiter"]], "limit() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.limit"]], "mc_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.mc_limiter"]], "minmod_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.minmod_limiter"]], "superbee_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.superbee_limiter"]], "superpower_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.superpower_limiter"]], "theta_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.theta_limiter"]], "upper_bound_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.upper_bound_limiter"]], "van_leer_klein_sharpening_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.van_leer_klein_sharpening_limiter"]], "dimension (class in clawpack.pyclaw.geometry)": [[94, "clawpack.pyclaw.geometry.Dimension"]], "domain (class in clawpack.petclaw.geometry)": [[94, "clawpack.petclaw.geometry.Domain"]], "domain (class in clawpack.pyclaw.geometry)": [[94, "clawpack.pyclaw.geometry.Domain"]], "grid (class in clawpack.pyclaw.geometry)": [[94, "clawpack.pyclaw.geometry.Grid"]], "patch (class in clawpack.petclaw.geometry)": [[94, "clawpack.petclaw.geometry.Patch"]], "patch (class in clawpack.pyclaw.geometry)": [[94, "clawpack.pyclaw.geometry.Patch"]], "add_dimension() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.add_dimension"]], "add_dimension() (clawpack.pyclaw.geometry.patch method)": [[94, "clawpack.pyclaw.geometry.Patch.add_dimension"]], "add_gauges() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.add_gauges"]], "c_center() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.c_center"]], "c_centers (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.c_centers"]], "c_centers_with_ghost() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.c_centers_with_ghost"]], "c_nodes (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.c_nodes"]], "c_nodes_with_ghost() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.c_nodes_with_ghost"]], "centers (clawpack.pyclaw.geometry.dimension property)": [[94, "clawpack.pyclaw.geometry.Dimension.centers"]], "centers_with_ghost() (clawpack.pyclaw.geometry.dimension method)": [[94, "clawpack.pyclaw.geometry.Dimension.centers_with_ghost"]], "delta (clawpack.pyclaw.geometry.dimension property)": [[94, "clawpack.pyclaw.geometry.Dimension.delta"]], "delta (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.delta"]], "dimensional_split (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.dimensional_split"]], "dimensions (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.dimensions"]], "dimensions (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.dimensions"]], "fwave (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.fwave"]], "gauge_dir_name (clawpack.pyclaw.geometry.grid attribute)": [[94, "clawpack.pyclaw.geometry.Grid.gauge_dir_name"]], "gauge_file_names (clawpack.pyclaw.geometry.grid attribute)": [[94, "clawpack.pyclaw.geometry.Grid.gauge_file_names"]], "gauge_files (clawpack.pyclaw.geometry.grid attribute)": [[94, "clawpack.pyclaw.geometry.Grid.gauge_files"]], "gauges (clawpack.pyclaw.geometry.grid attribute)": [[94, "clawpack.pyclaw.geometry.Grid.gauges"]], "get_dim_attribute() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.get_dim_attribute"]], "get_dim_attribute() (clawpack.pyclaw.geometry.patch method)": [[94, "clawpack.pyclaw.geometry.Patch.get_dim_attribute"]], "grid (clawpack.pyclaw.geometry.domain property)": [[94, "clawpack.pyclaw.geometry.Domain.grid"]], "kernel_language (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.kernel_language"]], "level (clawpack.pyclaw.geometry.patch attribute)": [[94, "clawpack.pyclaw.geometry.Patch.level"]], "lower_global (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.lower_global"]], "mthlim (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.mthlim"]], "name (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.name"]], "nodes (clawpack.pyclaw.geometry.dimension property)": [[94, "clawpack.pyclaw.geometry.Dimension.nodes"]], "nodes_with_ghost() (clawpack.pyclaw.geometry.dimension method)": [[94, "clawpack.pyclaw.geometry.Dimension.nodes_with_ghost"]], "num_cells_global (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.num_cells_global"]], "num_dim (clawpack.pyclaw.geometry.domain property)": [[94, "clawpack.pyclaw.geometry.Domain.num_dim"]], "num_dim (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.num_dim"]], "num_dim (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.num_dim"]], "order (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.order"]], "p_center() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.p_center"]], "p_centers (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.p_centers"]], "p_nodes (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.p_nodes"]], "patch (clawpack.pyclaw.geometry.domain property)": [[94, "clawpack.pyclaw.geometry.Domain.patch"]], "patch_index (clawpack.pyclaw.geometry.patch attribute)": [[94, "clawpack.pyclaw.geometry.Patch.patch_index"]], "plot() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.plot"]], "setup_gauge_files() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.setup_gauge_files"]], "source_split (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.source_split"]], "step_source (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.step_source"]], "transverse_waves (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.transverse_waves"]], "upper_global (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.upper_global"]], "verbosity (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.verbosity"]], "clawpack.pyclaw.fileio.ascii": [[97, "module-clawpack.pyclaw.fileio.ascii"]], "clawpack.pyclaw.fileio.binary": [[97, "module-clawpack.pyclaw.fileio.binary"]], "clawpack.pyclaw.fileio.hdf5": [[97, "module-clawpack.pyclaw.fileio.hdf5"]], "clawpack.pyclaw.fileio.netcdf": [[97, "module-clawpack.pyclaw.fileio.netcdf"]], "read() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.read"]], "read() (in module clawpack.pyclaw.fileio.binary)": [[97, "clawpack.pyclaw.fileio.binary.read"]], "read() (in module clawpack.pyclaw.fileio.hdf5)": [[97, "clawpack.pyclaw.fileio.hdf5.read"]], "read() (in module clawpack.pyclaw.fileio.netcdf)": [[97, "clawpack.pyclaw.fileio.netcdf.read"]], "read_array() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.read_array"]], "read_patch_header() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.read_patch_header"]], "read_t() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.read_t"]], "write() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.write"]], "write() (in module clawpack.pyclaw.fileio.hdf5)": [[97, "clawpack.pyclaw.fileio.hdf5.write"]], "write() (in module clawpack.pyclaw.fileio.netcdf)": [[97, "clawpack.pyclaw.fileio.netcdf.write"]], "write_array() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.write_array"]], "acoustics_1d() (in module clawpack.riemann.acoustics_1d_py)": [[102, "clawpack.riemann.acoustics_1D_py.acoustics_1D"]], "advection_1d() (in module clawpack.riemann.advection_1d_py)": [[102, "clawpack.riemann.advection_1D_py.advection_1D"]], "burgers_1d() (in module clawpack.riemann.burgers_1d_py)": [[102, "clawpack.riemann.burgers_1D_py.burgers_1D"]], "clawpack.riemann.acoustics_1d_py": [[102, "module-clawpack.riemann.acoustics_1D_py"]], "clawpack.riemann.advection_1d_py": [[102, "module-clawpack.riemann.advection_1D_py"]], "clawpack.riemann.burgers_1d_py": [[102, "module-clawpack.riemann.burgers_1D_py"]], "clawpack.riemann.euler_1d_py": [[102, "module-clawpack.riemann.euler_1D_py"]], "clawpack.riemann.shallow_1d_py": [[102, "module-clawpack.riemann.shallow_1D_py"]], "euler_exact_1d() (in module clawpack.riemann.euler_1d_py)": [[102, "clawpack.riemann.euler_1D_py.euler_exact_1D"]], "euler_hll_1d() (in module clawpack.riemann.euler_1d_py)": [[102, "clawpack.riemann.euler_1D_py.euler_hll_1D"]], "euler_hllc_1d() (in module clawpack.riemann.euler_1d_py)": [[102, "clawpack.riemann.euler_1D_py.euler_hllc_1D"]], "euler_roe_1d() (in module clawpack.riemann.euler_1d_py)": [[102, "clawpack.riemann.euler_1D_py.euler_roe_1D"]], "shallow_exact_1d() (in module clawpack.riemann.shallow_1d_py)": [[102, "clawpack.riemann.shallow_1D_py.shallow_exact_1D"]], "shallow_fwave_1d() (in module clawpack.riemann.shallow_1d_py)": [[102, "clawpack.riemann.shallow_1D_py.shallow_fwave_1d"]], "shallow_hll_1d() (in module clawpack.riemann.shallow_1d_py)": [[102, "clawpack.riemann.shallow_1D_py.shallow_hll_1D"]], "shallow_roe_1d() (in module clawpack.riemann.shallow_1d_py)": [[102, "clawpack.riemann.shallow_1D_py.shallow_roe_1D"]], "solution (class in clawpack.pyclaw.solution)": [[103, "clawpack.pyclaw.solution.Solution"]], "is_valid() (clawpack.pyclaw.solution.solution method)": [[103, "clawpack.pyclaw.solution.Solution.is_valid"]], "patch (clawpack.pyclaw.solution.solution property)": [[103, "clawpack.pyclaw.solution.Solution.patch"]], "plot() (clawpack.pyclaw.solution.solution method)": [[103, "clawpack.pyclaw.solution.Solution.plot"]], "read() (clawpack.pyclaw.solution.solution method)": [[103, "clawpack.pyclaw.solution.Solution.read"]], "set_all_states() (clawpack.pyclaw.solution.solution method)": [[103, "clawpack.pyclaw.solution.Solution.set_all_states"]], "start_frame (clawpack.pyclaw.solution.solution property)": [[103, "clawpack.pyclaw.solution.Solution.start_frame"]], "state (clawpack.pyclaw.solution.solution property)": [[103, "clawpack.pyclaw.solution.Solution.state"]], "write() (clawpack.pyclaw.solution.solution method)": [[103, "clawpack.pyclaw.solution.Solution.write"]], "clawsolver (class in clawpack.pyclaw.classic.solver)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver"]], "sharpclawsolver (class in clawpack.pyclaw.sharpclaw.solver)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver"]], "accept_reject_step() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.accept_reject_step"]], "aux_time_dep (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.aux_time_dep"]], "call_before_step_each_stage (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.call_before_step_each_stage"]], "cfl_desired (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.cfl_desired"]], "cfl_max (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.cfl_max"]], "char_decomp (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.char_decomp"]], "check_3rd_ord_cond() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.check_3rd_ord_cond"]], "dq() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.dq"]], "dq_src (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.dq_src"]], "dqdt() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.dqdt"]], "fwave (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.fwave"]], "fwave (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.fwave"]], "get_dt_new() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.get_dt_new"]], "kernel_language (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.kernel_language"]], "kernel_language (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.kernel_language"]], "lim_type (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.lim_type"]], "mthlim (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.mthlim"]], "num_ghost (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.num_ghost"]], "order (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.order"]], "setup() (clawpack.pyclaw.classic.solver.clawsolver method)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.setup"]], "setup() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.setup"]], "source_split (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.source_split"]], "step() (clawpack.pyclaw.classic.solver.clawsolver method)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.step"]], "step() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.step"]], "step_hyperbolic() (clawpack.pyclaw.classic.solver.clawsolver method)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.step_hyperbolic"]], "step_source (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.step_source"]], "tfluct (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.tfluct"]], "tfluct_solver (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.tfluct_solver"]], "time_integrator (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.time_integrator"]], "update_saved_values() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.update_saved_values"]], "verbosity (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.verbosity"]], "weno_order (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.weno_order"]], "f (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.F"]], "f (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.F"]], "state (class in clawpack.petclaw.state)": [[106, "clawpack.petclaw.state.State"]], "state (class in clawpack.pyclaw.state)": [[106, "clawpack.pyclaw.state.State"]], "aux (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.aux"]], "fset (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.fset"]], "gauge_data (clawpack.petclaw.state.state attribute)": [[106, "clawpack.petclaw.state.State.gauge_data"]], "gauge_data (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.gauge_data"]], "get_aux_global() (clawpack.petclaw.state.state method)": [[106, "clawpack.petclaw.state.State.get_aux_global"]], "get_aux_global() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.get_aux_global"]], "get_auxbc_from_aux() (clawpack.petclaw.state.state method)": [[106, "clawpack.petclaw.state.State.get_auxbc_from_aux"]], "get_auxbc_from_aux() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.get_auxbc_from_aux"]], "get_q_global() (clawpack.petclaw.state.state method)": [[106, "clawpack.petclaw.state.State.get_q_global"]], "get_q_global() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.get_q_global"]], "get_qbc_from_q() (clawpack.petclaw.state.state method)": [[106, "clawpack.petclaw.state.State.get_qbc_from_q"]], "get_qbc_from_q() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.get_qbc_from_q"]], "is_valid() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.is_valid"]], "keep_gauges (clawpack.petclaw.state.state attribute)": [[106, "clawpack.petclaw.state.State.keep_gauges"]], "keep_gauges (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.keep_gauges"]], "mf (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.mF"]], "mf (clawpack.pyclaw.state.state property)": [[106, "clawpack.pyclaw.state.State.mF"]], "mp (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.mp"]], "mp (clawpack.pyclaw.state.state property)": [[106, "clawpack.pyclaw.state.State.mp"]], "num_aux (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.num_aux"]], "num_aux (clawpack.pyclaw.state.state property)": [[106, "clawpack.pyclaw.state.State.num_aux"]], "num_eqn (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.num_eqn"]], "num_eqn (clawpack.pyclaw.state.state property)": [[106, "clawpack.pyclaw.state.State.num_eqn"]], "p (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.p"]], "p (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.p"]], "problem_data (clawpack.petclaw.state.state attribute)": [[106, "clawpack.petclaw.state.State.problem_data"]], "problem_data (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.problem_data"]], "q (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.q"]], "set_aux_from_auxbc() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.set_aux_from_auxbc"]], "set_cparam() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.set_cparam"]], "set_num_ghost() (clawpack.petclaw.state.state method)": [[106, "clawpack.petclaw.state.State.set_num_ghost"]], "set_num_ghost() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.set_num_ghost"]], "set_q_from_qbc() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.set_q_from_qbc"]], "t (clawpack.petclaw.state.state attribute)": [[106, "clawpack.petclaw.state.State.t"]], "t (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.t"]], "framecounter (class in clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.FrameCounter"]], "verifyerror": [[109, "clawpack.pyclaw.util.VerifyError"]], "add_parent_doc() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.add_parent_doc"]], "check_diff() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.check_diff"]], "clawpack.pyclaw.util": [[109, "module-clawpack.pyclaw.util"]], "compile_library() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.compile_library"]], "construct_function_handle() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.construct_function_handle"]], "convert_fort_double_to_float() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.convert_fort_double_to_float"]], "gen_variants() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.gen_variants"]], "get_counter() (clawpack.pyclaw.util.framecounter method)": [[109, "clawpack.pyclaw.util.FrameCounter.get_counter"]], "increment() (clawpack.pyclaw.util.framecounter method)": [[109, "clawpack.pyclaw.util.FrameCounter.increment"]], "read_data_line() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.read_data_line"]], "reset_counter() (clawpack.pyclaw.util.framecounter method)": [[109, "clawpack.pyclaw.util.FrameCounter.reset_counter"]], "run_app_from_main() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.run_app_from_main"]], "run_serialized() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.run_serialized"]], "set_counter() (clawpack.pyclaw.util.framecounter method)": [[109, "clawpack.pyclaw.util.FrameCounter.set_counter"]], "test_app() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.test_app"]], "nodataerror": [[158, "clawpack.geoclaw.surge.storm.NoDataError"]], "storm (class in clawpack.geoclaw.surge.storm)": [[158, "clawpack.geoclaw.surge.storm.Storm"]], "available_formats() (in module clawpack.geoclaw.surge.storm)": [[158, "clawpack.geoclaw.surge.storm.available_formats"]], "available_models() (in module clawpack.geoclaw.surge.storm)": [[158, "clawpack.geoclaw.surge.storm.available_models"]], "category() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.category"]], "clawpack.geoclaw.surge.storm": [[158, "module-clawpack.geoclaw.surge.storm"]], "fill_rad_w_other_source() (in module clawpack.geoclaw.surge.storm)": [[158, "clawpack.geoclaw.surge.storm.fill_rad_w_other_source"]], "make_multi_structure() (in module clawpack.geoclaw.surge.storm)": [[158, "clawpack.geoclaw.surge.storm.make_multi_structure"]], "read() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read"]], "read_atcf() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_atcf"]], "read_geoclaw() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_geoclaw"]], "read_hurdat() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_hurdat"]], "read_ibtracs() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_ibtracs"]], "read_imd() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_imd"]], "read_jma() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_jma"]], "read_tcvitals() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_tcvitals"]], "write() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write"]], "write_atcf() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_atcf"]], "write_geoclaw() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_geoclaw"]], "write_hurdat() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_hurdat"]], "write_imd() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_imd"]], "write_jma() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_jma"]], "write_tcvitals() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_tcvitals"]], "topography (class in clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.Topography"]], "x (clawpack.geoclaw.topotools.topography property)": [[164, "clawpack.geoclaw.topotools.Topography.X"], [164, "clawpack.geoclaw.topotools.Topography.x"]], "y (clawpack.geoclaw.topotools.topography property)": [[164, "clawpack.geoclaw.topotools.Topography.Y"], [164, "clawpack.geoclaw.topotools.Topography.y"]], "z (clawpack.geoclaw.topotools.topography property)": [[164, "clawpack.geoclaw.topotools.Topography.Z"], [164, "clawpack.geoclaw.topotools.Topography.z"]], "clawpack.geoclaw.topotools": [[164, "module-clawpack.geoclaw.topotools"]], "create_topo_func() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.create_topo_func"]], "crop() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.crop"]], "delta (clawpack.geoclaw.topotools.topography property)": [[164, "clawpack.geoclaw.topotools.Topography.delta"]], "determine_topo_type() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.determine_topo_type"]], "extent (clawpack.geoclaw.topotools.topography property)": [[164, "clawpack.geoclaw.topotools.Topography.extent"]], "fetch_topo_url() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.fetch_topo_url"]], "generate_2d_coordinates() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.generate_2d_coordinates"]], "generate_2d_topo() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.generate_2d_topo"]], "get_topo() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.get_topo"]], "in_poly() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.in_poly"]], "interp_unstructured() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.interp_unstructured"]], "make_shoreline_xy() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.make_shoreline_xy"]], "plot() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.plot"]], "read() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.read"]], "read_header() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.read_header"]], "read_netcdf() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.read_netcdf"]], "replace_no_data_values() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.replace_no_data_values"]], "replace_values() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.replace_values"]], "set_xyz() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.set_xyZ"]], "smooth_data() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.smooth_data"]], "swapheader() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.swapheader"]], "topo1writer() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.topo1writer"]], "topo2writer() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.topo2writer"]], "topo3writer() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.topo3writer"]], "write() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.write"]]}})
\ No newline at end of file
+Search.setIndex({"docnames": ["ClawPlotAxes", "ClawPlotData", "ClawPlotFigure", "ClawPlotItem", "about", "adjoint", "amr_algorithm", "amrclaw", "amrclaw1d", "amrclaw_doxygen", "amrclaw_flowcharts", "application_documentation", "apps", "aws", "b4run", "b4step_defaults", "bc", "biblio", "bouss1d", "bouss2d", "changes_to_master", "claw43to46", "claw46to50", "claw4x", "clawpack5", "clawpack_components", "community", "contents", "contribute_apps", "current_data", "developers", "docker_image", "dtopotools_module", "f77_vs_f90", "fgmax", "fgmax_tools_module", "fgout", "fgout_tools_module", "first_run", "first_run_fortran", "first_run_pyclaw", "flagregions", "force_dry", "fortran", "fortran_compilers", "fvmbook", "galleries", "gauges", "geoclaw", "geoclaw1d", "geoclaw_started", "geoclaw_util_module", "geohints", "geoplot", "git_versions", "googleearth_plotting", "gpu", "grid_registration", "howto_doc", "howto_release", "installing", "installing_fortcodes", "installing_pip", "kmltools_module", "lagrangian_gauges", "license", "makefiles", "makefiles_library", "manning", "mapc2p", "marching_front", "matlab_plotting", "nearshore_interp", "netcdf", "newapp", "okada", "openmp", "output_styles", "packages", "photos", "plotexamples", "plotting", "plotting_faq", "plotting_geoclaw", "plotting_python", "prereqs", "pyclaw/about", "pyclaw/basics", "pyclaw/classes", "pyclaw/clawpack_and_pyclaw", "pyclaw/cloud", "pyclaw/controller", "pyclaw/evolve/limiters", "pyclaw/examples", "pyclaw/geometry", "pyclaw/going_further", "pyclaw/index", "pyclaw/io", "pyclaw/output", "pyclaw/parallel", "pyclaw/plotting", "pyclaw/problem", "pyclaw/rp", "pyclaw/solution", "pyclaw/solvers", "pyclaw/started", "pyclaw/state", "pyclaw/troubleshooting", "pyclaw/tutorial", "pyclaw/util", "python", "python_path", "qinit_defaults", "quick_surge", "quick_tsunami", "refinement", "regression", "release_5_0_0", "release_5_10_0", "release_5_1_0", "release_5_2_0", "release_5_2_1", "release_5_2_2", "release_5_3_0", "release_5_3_1", "release_5_4_0", "release_5_4_1", "release_5_5_0", "release_5_6_0", "release_5_6_1", "release_5_7_0", "release_5_7_1", "release_5_8_0", "release_5_8_1", "release_5_8_2", "release_5_9_0", "release_5_9_1", "release_5_9_2", "releases", "restart", "riemann", "riemann/Shallow_water_Riemann_solvers", "ruled_rectangles", "sealevel", "set_eta_init", "setaux_defaults", "setenv", "setplot", "setrun", "setrun_amrclaw", "setrun_amrclaw_sample", "setrun_geoclaw", "setrun_sample", "sharing", "sphere_source", "sphinxdoc", "src1d_defaults", "src_defaults", "storm_module", "surgedata", "testing", "timing", "topo", "topotools", "topotools_module", "trouble", "tsunamidata", "user_routines", "visit_plotting", "vm", "wp_algorithms"], "filenames": ["ClawPlotAxes.rst", "ClawPlotData.rst", "ClawPlotFigure.rst", "ClawPlotItem.rst", "about.rst", "adjoint.rst", "amr_algorithm.rst", "amrclaw.rst", "amrclaw1d.rst", "amrclaw_doxygen.rst", "amrclaw_flowcharts.rst", "application_documentation.rst", "apps.rst", "aws.rst", "b4run.rst", "b4step_defaults.rst", "bc.rst", "biblio.rst", "bouss1d.rst", "bouss2d.rst", "changes_to_master.rst", "claw43to46.rst", "claw46to50.rst", "claw4x.rst", "clawpack5.rst", "clawpack_components.rst", "community.rst", "contents.rst", "contribute_apps.rst", "current_data.rst", "developers.rst", "docker_image.rst", "dtopotools_module.rst", "f77_vs_f90.rst", "fgmax.rst", "fgmax_tools_module.rst", "fgout.rst", "fgout_tools_module.rst", "first_run.rst", "first_run_fortran.rst", "first_run_pyclaw.rst", "flagregions.rst", "force_dry.rst", "fortran.rst", "fortran_compilers.rst", "fvmbook.rst", "galleries.rst", "gauges.rst", "geoclaw.rst", "geoclaw1d.rst", "geoclaw_started.rst", "geoclaw_util_module.rst", "geohints.rst", "geoplot.rst", "git_versions.rst", "googleearth_plotting.rst", "gpu.rst", "grid_registration.rst", "howto_doc.rst", "howto_release.rst", "installing.rst", "installing_fortcodes.rst", "installing_pip.rst", "kmltools_module.rst", "lagrangian_gauges.rst", "license.rst", "makefiles.rst", "makefiles_library.rst", "manning.rst", "mapc2p.rst", "marching_front.rst", "matlab_plotting.rst", "nearshore_interp.rst", "netcdf.rst", "newapp.rst", "okada.rst", "openmp.rst", "output_styles.rst", "packages.rst", "photos.rst", "plotexamples.rst", "plotting.rst", "plotting_faq.rst", "plotting_geoclaw.rst", "plotting_python.rst", "prereqs.rst", "pyclaw/about.rst", "pyclaw/basics.rst", "pyclaw/classes.rst", "pyclaw/clawpack_and_pyclaw.rst", "pyclaw/cloud.rst", "pyclaw/controller.rst", "pyclaw/evolve/limiters.rst", "pyclaw/examples.rst", "pyclaw/geometry.rst", "pyclaw/going_further.rst", "pyclaw/index.rst", "pyclaw/io.rst", "pyclaw/output.rst", "pyclaw/parallel.rst", "pyclaw/plotting.rst", "pyclaw/problem.rst", "pyclaw/rp.rst", "pyclaw/solution.rst", "pyclaw/solvers.rst", "pyclaw/started.rst", "pyclaw/state.rst", "pyclaw/troubleshooting.rst", "pyclaw/tutorial.rst", "pyclaw/util.rst", "python.rst", "python_path.rst", "qinit_defaults.rst", "quick_surge.rst", "quick_tsunami.rst", "refinement.rst", "regression.rst", "release_5_0_0.rst", "release_5_10_0.rst", "release_5_1_0.rst", "release_5_2_0.rst", "release_5_2_1.rst", "release_5_2_2.rst", "release_5_3_0.rst", "release_5_3_1.rst", "release_5_4_0.rst", "release_5_4_1.rst", "release_5_5_0.rst", "release_5_6_0.rst", "release_5_6_1.rst", "release_5_7_0.rst", "release_5_7_1.rst", "release_5_8_0.rst", "release_5_8_1.rst", "release_5_8_2.rst", "release_5_9_0.rst", "release_5_9_1.rst", "release_5_9_2.rst", "releases.rst", "restart.rst", "riemann.rst", "riemann/Shallow_water_Riemann_solvers.rst", "ruled_rectangles.rst", "sealevel.rst", "set_eta_init.rst", "setaux_defaults.rst", "setenv.rst", "setplot.rst", "setrun.rst", "setrun_amrclaw.rst", "setrun_amrclaw_sample.rst", "setrun_geoclaw.rst", "setrun_sample.rst", "sharing.rst", "sphere_source.rst", "sphinxdoc.rst", "src1d_defaults.rst", "src_defaults.rst", "storm_module.rst", "surgedata.rst", "testing.rst", "timing.rst", "topo.rst", "topotools.rst", "topotools_module.rst", "trouble.rst", "tsunamidata.rst", "user_routines.rst", "visit_plotting.rst", "vm.rst", "wp_algorithms.rst"], "titles": ["ClawPlotAxes", "ClawPlotData", "ClawPlotFigure", "ClawPlotItem", "About this software", "Guiding AMR with adjoint flagging", "Adaptive mesh refinement (AMR) algorithms", "AMRClaw Description and Detailed Contents", "AMRClaw for 1d problems", "Doxygen documentation of AMRClaw", "AMRClaw Flowcharts", "Application documentation", "Clawpack Applications repository", "Amazon Web Services EC2 Clawpack AMI", "b4run function", "b4step default routines", "Boundary conditions", "Bibliography", "Boussinesq solvers in One Space Dimension", "Boussinesq solvers in Two Space Dimensions", "Changes to master since v5.10.0", "Converting from Clawpack 4.3 to 4.6", "Converting from Clawpack 4.6 to 5.0", "Clawpack 4.x links", "Changes in Clawpack 5.0", "Clawpack components", "Clawpack Community", "Full Table of Contents", "Contributing examples and applications", "current_data", "Developers\u2019 Guide", "Docker for Clawpack", "dtopotools module for moving topography", "Fortran 77 vs. Fortran 90 files", "Fixed grid monitoring (fgmax)", "fgmax_tools module for working with fgmax grids", "Fixed grid output (fgout)", "fgout_tools module for working with fgout grids", "Running an example", "Testing your Fortran installation and running an example", "Testing a PyClaw installation and running an example", "Specifying flagregions for adaptive refinement", "Force Cells to be Dry Initially", "Fortran version", "Fortran Compilers", "Examples from the book FVMHP", "Clawpack Gallery", "Gauges", "GeoClaw Description and Detailed Contents", "GeoClaw in One Space Dimension", "Getting started with GeoClaw", "geoclaw.util module of utility functions", "Cautionary Hints on using GeoClaw", "GeoClaw plotting tools", "Keeping track of repository versions with Git", "Visualizing GeoClaw results in Google Earth", "Using the GPU version of Clawpack", "Grid registration", "Guide for updating this documentation", "Guide for doing a Clawpack release", "Installing Clawpack", "Options for installing Clawpack Fortran codes", "pip install instructions", "kmltools module of utility functions", "Lagrangian gauges for particle tracking", "License", "Clawpack Makefiles", "Library routines in Makefiles", "Manning friction term", "The mapc2p function", "Marching Front algorithm", "Plotting using Matlab", "Nearshore interpolation", "Using NetCDF output", "Creating a new application directory", "Earthquake sources: Fault slip and the Okada model", "Using OpenMP", "Output data sytles and formats", "Which Clawpack solver should I use?", "Clawpack Community Photos", "Plotting examples", "Plotting with Visclaw", "Plotting hints and FAQ", "Plotting routines for GeoClaw", "Plotting options in Python", "Installation Prerequisites", "About PyClaw", "PyClaw Basics", "Understanding Pyclaw Classes", "Porting a problem from Clawpack 4.6.x to PyClaw", "Running PyClaw in the cloud", "Pyclaw Controller Class", "Pyclaw Limiters", "Working with PyClaw\u2019s built-in examples", "PyClaw Geometry", "Going Further", "PyClaw", "Pyclaw Input/Output Package", "PyClaw output", "Running in parallel", "Plotting PyClaw results", "Setting up your own problem", "Riemann Solver Package", "PyClaw Solutions", "Using PyClaw\u2019s solvers: Classic and SharpClaw", "Installing PyClaw", "PyClaw State", "Troubleshooting", "PyClaw tutorial: Solve the acoustics equations", "Pyclaw Utility Module", "Python Hints", "Python path", "qinit default routines", "Quick start guide for storm surge modeling", "Quick start guide for tsunami modeling", "AMR refinement criteria", "Regression testing", "v5.0.0 release notes", "v5.10.0 release notes", "v5.1.0 release notes", "v5.2.0 release notes", "v5.2.1 release notes", "v5.2.2 release notes", "v5.3.0 release notes", "v5.3.1 release notes", "v5.4.0 release notes", "v5.4.1 release notes", "v5.5.0 release notes", "v5.6.0 release notes", "v5.6.1 release notes", "v5.7.0 release notes", "v5.7.1 release notes", "v5.8.0 release notes", "v5.8.1 release notes", "v5.8.2 release notes", "v5.9.0 release notes", "v5.9.1 release notes", "v5.9.2 release notes", "Releases of Clawpack and release notes", "Checkpointing and restarting", "Riemann solvers", "Shallow water Riemann solvers in Clawpack", "Ruled Rectangles", "Setting sea_level", "Set Eta Init \u2013 spatially varying initial surface elevation", "setaux default routines", "Set environment variables", "Using setplot.py to specify the desired plots", "Specifying classic run-time parameters in setrun.py", "Specifying AMRClaw run-time parameters in setrun.py", "Sample setrun.py module for AMRClaw", "Specifying GeoClaw parameters in setrun.py", "Sample setrun.py module for classic Clawpack", "Saving and sharing results", "Source terms for shallow water on the sphere", "Compiling the Sphinx documentation locally", "src1d default routines", "src default routines", "Storm Specification Class and Tools", "Sources for Storm Surge Data", "Testing your installation", "Timing Statistics", "Topography data", "Python tools for working with topo and dtopo", "topotools module for working with topography data", "Troubleshooting", "Some sources of tsunami data", "User files required for the Fortran code", "Plotting with VisIt", "Clawpack Virtual Machine", "Wave-propagation algorithms"], "terms": {"For": [0, 1, 2, 3, 5, 7, 8, 9, 10, 12, 13, 16, 17, 18, 19, 21, 24, 26, 27, 28, 29, 30, 31, 32, 34, 36, 38, 40, 41, 42, 44, 45, 47, 49, 51, 52, 53, 55, 57, 58, 59, 66, 67, 70, 71, 72, 75, 76, 77, 81, 82, 84, 85, 88, 89, 93, 94, 96, 97, 98, 99, 101, 104, 105, 109, 110, 111, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 138, 140, 141, 142, 143, 144, 147, 148, 149, 150, 151, 152, 155, 158, 159, 161, 162, 164, 166, 167, 170], "usag": [0, 1, 2, 3, 13, 19, 48, 49, 51, 55, 60, 97, 127, 158, 164], "see": [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 12, 13, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 30, 31, 32, 34, 36, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 55, 56, 57, 58, 59, 60, 61, 62, 64, 65, 66, 67, 68, 70, 71, 72, 74, 75, 76, 77, 80, 81, 82, 83, 84, 85, 86, 89, 91, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 146, 147, 148, 149, 150, 151, 153, 155, 156, 157, 158, 160, 161, 162, 164, 165, 166, 167, 168, 169, 170], "us": [0, 1, 2, 3, 4, 6, 7, 8, 9, 10, 11, 12, 14, 16, 17, 21, 22, 23, 24, 25, 26, 28, 29, 30, 32, 34, 35, 37, 38, 39, 40, 42, 43, 44, 45, 47, 48, 49, 50, 51, 53, 54, 55, 57, 58, 59, 60, 61, 63, 65, 66, 68, 70, 72, 74, 75, 77, 80, 81, 82, 83, 84, 85, 86, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 99, 100, 102, 103, 105, 106, 108, 109, 110, 111, 112, 113, 115, 116, 118, 120, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 135, 136, 137, 138, 139, 142, 143, 146, 148, 149, 150, 151, 152, 154, 156, 157, 158, 161, 162, 164, 166, 168, 169, 170], "setplot": [0, 1, 2, 3, 7, 21, 22, 24, 27, 45, 47, 48, 49, 80, 81, 100, 101, 109, 118, 125, 135, 136, 165, 168], "py": [0, 1, 2, 3, 5, 6, 7, 8, 11, 13, 14, 16, 21, 22, 27, 30, 32, 34, 35, 37, 38, 39, 40, 41, 42, 43, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 58, 59, 63, 64, 66, 68, 70, 75, 77, 78, 80, 81, 83, 84, 89, 93, 96, 99, 100, 101, 105, 113, 115, 116, 118, 119, 120, 121, 122, 123, 124, 125, 127, 128, 129, 130, 131, 132, 135, 136, 137, 139, 140, 141, 143, 144, 146, 154, 158, 162, 164, 165, 167, 168], "specifi": [0, 1, 2, 3, 4, 5, 6, 7, 15, 16, 18, 19, 22, 24, 27, 29, 30, 31, 32, 34, 35, 36, 37, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 54, 55, 57, 63, 66, 67, 68, 70, 71, 72, 75, 76, 77, 78, 80, 81, 83, 88, 91, 94, 97, 98, 101, 103, 104, 107, 109, 111, 112, 113, 116, 119, 122, 123, 124, 125, 126, 127, 130, 132, 135, 136, 137, 139, 140, 142, 143, 144, 145, 150, 152, 153, 156, 157, 158, 159, 161, 162, 164, 165, 166, 168, 170], "desir": [0, 1, 2, 3, 6, 7, 16, 19, 24, 27, 28, 32, 34, 35, 36, 37, 42, 45, 47, 49, 59, 62, 63, 64, 70, 72, 75, 77, 80, 81, 82, 84, 88, 89, 91, 98, 103, 104, 112, 125, 127, 130, 144, 146, 148, 149, 150, 151, 152, 158, 162, 164, 165], "exampl": [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 13, 14, 16, 18, 22, 24, 26, 29, 30, 31, 32, 37, 41, 43, 44, 46, 48, 49, 51, 57, 58, 59, 60, 61, 63, 64, 66, 67, 68, 72, 75, 76, 77, 81, 82, 84, 86, 87, 88, 89, 91, 94, 95, 97, 98, 101, 102, 103, 104, 105, 108, 109, 110, 111, 113, 114, 115, 116, 118, 119, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 135, 136, 137, 139, 140, 141, 143, 144, 146, 147, 148, 149, 150, 151, 152, 153, 154, 158, 160, 161, 162, 164, 165, 166, 167], "object": [0, 1, 2, 3, 5, 18, 24, 29, 32, 34, 36, 37, 41, 47, 55, 63, 70, 75, 81, 82, 84, 88, 89, 91, 97, 98, 99, 101, 103, 106, 107, 108, 109, 119, 128, 136, 137, 139, 140, 148, 149, 150, 151, 152, 158, 164], "thi": [0, 1, 2, 3, 5, 6, 8, 10, 11, 12, 13, 14, 16, 17, 18, 19, 20, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 54, 55, 56, 57, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 70, 71, 72, 73, 75, 76, 77, 81, 82, 84, 85, 86, 88, 89, 91, 92, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 113, 114, 115, 116, 118, 119, 120, 122, 123, 124, 125, 126, 127, 128, 129, 130, 132, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 158, 159, 160, 161, 162, 164, 165, 166, 167, 168, 169, 170], "class": [0, 1, 2, 3, 5, 27, 32, 34, 35, 36, 37, 41, 55, 63, 75, 82, 84, 89, 94, 96, 101, 103, 104, 106, 108, 109, 110, 128, 130, 139, 142, 147, 148, 149, 150, 151, 152, 164], "ar": [0, 1, 2, 3, 4, 5, 6, 7, 9, 10, 12, 13, 15, 16, 18, 19, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 52, 53, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 70, 71, 75, 76, 77, 78, 81, 83, 84, 85, 86, 88, 89, 91, 92, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 119, 120, 121, 122, 123, 124, 125, 126, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 147, 148, 149, 150, 151, 152, 154, 155, 156, 157, 158, 159, 160, 161, 162, 164, 165, 167, 170], "usual": [0, 2, 3, 5, 6, 19, 32, 36, 42, 47, 50, 55, 63, 66, 75, 77, 93, 94, 99, 101, 102, 104, 109, 113, 115, 125, 140, 148, 149, 150, 151, 152, 165, 167], "creat": [0, 1, 2, 3, 5, 6, 7, 21, 26, 27, 30, 32, 34, 35, 36, 37, 38, 39, 41, 43, 45, 47, 48, 49, 50, 54, 56, 58, 62, 63, 66, 75, 77, 81, 82, 84, 89, 90, 93, 94, 96, 97, 100, 103, 106, 107, 108, 109, 115, 116, 118, 119, 123, 124, 125, 127, 128, 129, 132, 135, 142, 147, 148, 149, 150, 153, 155, 158, 164, 166, 167, 168], "new_plotax": [0, 2, 47, 55, 82, 147], "clawplotfigur": [0, 1, 55, 82, 136, 147], "The": [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 20, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 32, 34, 36, 37, 38, 39, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 56, 57, 58, 59, 61, 62, 63, 64, 65, 66, 67, 68, 72, 74, 75, 76, 77, 78, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 91, 92, 94, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 109, 110, 111, 113, 115, 116, 118, 119, 120, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 160, 161, 162, 164, 165, 166, 167, 168, 169, 170], "follow": [0, 2, 3, 4, 5, 6, 13, 16, 18, 19, 20, 21, 25, 26, 30, 32, 34, 38, 39, 40, 42, 47, 50, 55, 57, 58, 59, 60, 62, 65, 70, 71, 75, 77, 82, 83, 85, 86, 88, 89, 90, 93, 94, 97, 98, 99, 101, 102, 103, 105, 106, 108, 109, 111, 116, 118, 127, 132, 135, 136, 137, 139, 140, 142, 146, 147, 148, 149, 151, 158, 160, 161, 162, 165, 167, 169], "can": [0, 2, 3, 4, 5, 6, 7, 8, 9, 11, 12, 13, 14, 15, 16, 18, 19, 21, 22, 24, 26, 28, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 66, 67, 68, 70, 71, 72, 74, 75, 76, 77, 78, 80, 81, 82, 83, 84, 86, 88, 89, 90, 92, 93, 94, 96, 97, 98, 99, 100, 101, 103, 104, 105, 106, 107, 108, 109, 111, 112, 113, 115, 116, 118, 119, 120, 123, 124, 125, 126, 127, 130, 131, 132, 135, 137, 138, 139, 140, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 156, 157, 158, 160, 162, 164, 165, 166, 167, 168, 170], "set": [0, 1, 2, 3, 5, 6, 8, 13, 14, 15, 16, 18, 19, 24, 27, 29, 30, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 51, 52, 53, 54, 55, 58, 59, 61, 62, 63, 64, 66, 67, 70, 72, 74, 75, 76, 77, 78, 80, 81, 88, 89, 91, 93, 94, 95, 96, 97, 98, 99, 102, 103, 104, 105, 106, 107, 108, 109, 111, 112, 115, 116, 118, 119, 120, 123, 124, 125, 127, 129, 130, 132, 135, 136, 137, 139, 140, 141, 142, 145, 147, 148, 149, 150, 151, 152, 153, 154, 158, 159, 162, 164, 166, 167, 170], "user": [0, 2, 3, 4, 5, 6, 12, 13, 21, 22, 24, 25, 27, 28, 29, 30, 31, 34, 36, 37, 44, 49, 52, 55, 60, 62, 63, 68, 71, 75, 77, 82, 89, 90, 93, 97, 99, 107, 109, 110, 111, 115, 123, 125, 127, 129, 136, 137, 140, 148, 150, 151, 152, 155, 164, 170], "name": [0, 1, 2, 3, 5, 7, 11, 12, 13, 18, 19, 22, 24, 30, 31, 32, 35, 36, 37, 38, 39, 41, 42, 43, 47, 49, 55, 58, 59, 63, 65, 71, 82, 84, 86, 89, 91, 93, 94, 97, 98, 102, 103, 108, 109, 111, 118, 124, 127, 132, 139, 140, 142, 147, 148, 149, 150, 151, 152, 158, 164, 167, 168], "str": [0, 1, 3, 32, 63, 97, 148, 149, 158, 164], "axescmd": [0, 84], "command": [0, 1, 2, 3, 11, 13, 14, 19, 30, 43, 54, 55, 56, 59, 61, 62, 66, 74, 81, 82, 85, 88, 89, 91, 96, 99, 100, 104, 108, 109, 110, 111, 116, 136, 140, 146, 147, 148, 149, 162, 164], "ax": [0, 1, 2, 29, 32, 47, 55, 63, 71, 81, 82, 84, 147, 164], "subplot": [0, 32, 70, 84, 142], "1": [0, 2, 3, 4, 5, 6, 7, 8, 9, 13, 14, 15, 16, 17, 18, 19, 24, 32, 34, 35, 36, 38, 39, 40, 41, 47, 48, 49, 51, 52, 53, 55, 57, 58, 59, 62, 63, 64, 66, 71, 75, 77, 82, 84, 88, 89, 91, 92, 93, 94, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 115, 120, 122, 123, 125, 127, 128, 130, 132, 134, 138, 139, 140, 141, 142, 143, 145, 147, 148, 149, 150, 151, 152, 154, 158, 161, 162, 164, 165, 166, 167, 170], "singl": [0, 1, 2, 3, 5, 6, 16, 21, 24, 25, 29, 30, 32, 34, 36, 37, 42, 47, 49, 50, 55, 57, 58, 59, 63, 64, 66, 71, 75, 76, 77, 78, 88, 94, 97, 98, 103, 109, 116, 122, 123, 125, 138, 140, 144, 148, 149, 150, 151, 162, 164, 166, 167], "fill": [0, 3, 4, 6, 16, 26, 55, 70, 94, 97, 106, 113, 125, 144, 148, 158, 161, 164, 167], "figur": [0, 1, 2, 4, 13, 32, 38, 39, 42, 45, 47, 57, 63, 70, 71, 81, 84, 103, 111, 118, 135, 140, 142, 147, 164], "2": [0, 3, 4, 6, 7, 15, 16, 17, 18, 19, 24, 32, 34, 35, 36, 37, 41, 42, 47, 49, 51, 55, 57, 63, 64, 68, 70, 71, 72, 75, 76, 77, 82, 84, 85, 88, 89, 91, 92, 94, 97, 98, 99, 101, 102, 103, 104, 105, 106, 108, 109, 111, 115, 116, 118, 119, 123, 124, 125, 127, 128, 129, 130, 132, 135, 136, 138, 139, 140, 142, 145, 148, 149, 150, 151, 152, 154, 158, 161, 162, 164, 167, 170], "top": [0, 1, 3, 11, 25, 31, 32, 36, 55, 58, 59, 61, 62, 75, 82, 96, 101, 102, 111, 116, 139, 146], "half": [0, 16, 17, 75, 77, 104, 135, 148, 167], "0": [0, 2, 3, 4, 5, 6, 16, 18, 19, 21, 27, 29, 30, 32, 34, 36, 37, 41, 42, 47, 48, 49, 51, 52, 55, 56, 57, 58, 59, 61, 62, 63, 64, 66, 67, 68, 70, 71, 72, 75, 77, 82, 84, 85, 88, 89, 91, 92, 94, 97, 98, 99, 101, 102, 103, 104, 105, 106, 108, 109, 110, 111, 115, 121, 122, 124, 126, 129, 131, 133, 134, 136, 137, 138, 139, 141, 142, 143, 144, 148, 149, 150, 151, 152, 154, 161, 162, 164, 166, 167, 169, 170], "8": [0, 34, 36, 42, 47, 55, 58, 63, 70, 77, 82, 94, 107, 109, 117, 118, 129, 135, 138, 140, 142, 147, 148, 149, 151, 152], "tall": 0, "skinni": 0, "axi": [0, 32, 42, 49, 53, 55, 70, 71, 82, 94, 136, 142], "matplotlib": [0, 2, 3, 13, 32, 42, 53, 55, 70, 81, 82, 85, 87, 90, 110, 131, 141, 147, 164, 165], "document": [0, 1, 2, 3, 6, 7, 19, 20, 23, 24, 25, 26, 27, 30, 31, 34, 48, 52, 57, 62, 65, 75, 81, 82, 83, 84, 86, 92, 94, 97, 98, 99, 100, 104, 106, 109, 111, 118, 120, 133, 134, 135, 136, 137, 138, 147, 150, 154, 168, 169], "show": [0, 2, 3, 9, 10, 12, 14, 30, 32, 38, 39, 42, 46, 47, 55, 58, 59, 63, 66, 70, 71, 84, 94, 104, 108, 111, 116, 118, 123, 133, 134, 135, 142, 164, 165, 167], "bool": [0, 1, 2, 3, 51, 63, 91, 97, 102, 103, 104, 106, 109, 151, 158, 164], "If": [0, 1, 2, 3, 4, 5, 6, 12, 13, 15, 16, 18, 19, 20, 21, 22, 24, 25, 26, 27, 29, 30, 31, 32, 34, 36, 37, 38, 39, 40, 42, 43, 44, 47, 49, 51, 55, 57, 58, 59, 60, 61, 62, 63, 64, 66, 67, 68, 70, 71, 72, 75, 76, 77, 78, 80, 81, 82, 84, 85, 86, 88, 93, 94, 96, 97, 98, 99, 101, 103, 104, 105, 106, 107, 109, 111, 113, 114, 115, 116, 118, 125, 126, 127, 128, 129, 130, 132, 135, 136, 137, 139, 140, 141, 142, 143, 144, 145, 146, 148, 149, 150, 151, 152, 156, 157, 158, 160, 162, 164, 165, 167, 170], "fals": [0, 1, 2, 3, 5, 32, 37, 42, 52, 53, 54, 55, 63, 70, 77, 91, 94, 97, 102, 103, 104, 106, 109, 124, 125, 130, 135, 139, 141, 148, 149, 150, 151, 152, 158, 164], "suppress": [0, 2, 3, 30, 55, 63, 124, 126, 148, 149], "all": [0, 1, 4, 6, 11, 12, 13, 16, 19, 22, 24, 25, 27, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 42, 43, 44, 47, 48, 51, 52, 54, 55, 57, 58, 59, 60, 61, 63, 64, 65, 66, 67, 71, 72, 74, 75, 76, 77, 78, 81, 82, 84, 85, 86, 88, 91, 92, 94, 96, 97, 98, 99, 101, 102, 103, 104, 106, 109, 110, 111, 114, 115, 116, 118, 119, 120, 123, 124, 125, 127, 130, 132, 138, 139, 140, 141, 142, 144, 147, 148, 149, 150, 151, 152, 153, 159, 160, 161, 162, 164, 165, 167], "item": [0, 1, 3, 71, 81, 84, 109, 132, 137, 147], "titl": [0, 1, 4, 17, 26, 42, 47, 55, 63, 70, 81, 96, 125, 136, 142, 164], "appear": [0, 1, 3, 5, 8, 13, 20, 25, 30, 34, 36, 47, 48, 49, 55, 58, 63, 66, 69, 82, 98, 103, 106, 118, 125, 132, 135, 136, 137, 151, 153, 162], "default": [0, 1, 2, 3, 13, 18, 19, 24, 30, 32, 34, 36, 37, 44, 47, 48, 51, 53, 54, 55, 57, 62, 63, 64, 66, 67, 71, 72, 75, 76, 77, 82, 84, 88, 91, 93, 94, 97, 98, 99, 100, 103, 104, 106, 107, 109, 115, 118, 119, 125, 129, 130, 132, 135, 136, 137, 139, 143, 149, 150, 151, 154, 158, 162, 164, 167], "string": [0, 1, 3, 7, 32, 34, 37, 47, 49, 51, 55, 57, 63, 64, 82, 89, 91, 92, 94, 97, 98, 103, 109, 111, 118, 136, 148, 151, 158, 164], "new": [0, 1, 2, 4, 5, 6, 8, 12, 13, 19, 20, 22, 24, 26, 27, 30, 31, 32, 34, 35, 36, 37, 41, 42, 43, 44, 47, 48, 51, 55, 56, 57, 59, 62, 63, 64, 66, 67, 68, 70, 71, 76, 77, 82, 84, 87, 88, 89, 90, 91, 97, 99, 101, 104, 106, 113, 115, 118, 119, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 135, 136, 137, 139, 140, 142, 143, 144, 146, 148, 149, 151, 158, 162, 164, 167], "v5": [0, 5, 14, 30, 31, 34, 36, 41, 45, 47, 56, 58, 59, 61, 62, 67, 77, 103, 110, 111, 115, 138, 139, 143, 144, 149, 151, 154], "9": [0, 34, 36, 37, 42, 47, 55, 63, 64, 77, 82, 94, 97, 103, 118, 125, 138, 139, 142, 148, 151, 152, 154], "note": [0, 1, 3, 4, 5, 13, 15, 16, 19, 22, 24, 26, 27, 30, 32, 34, 35, 36, 37, 41, 42, 43, 44, 47, 49, 51, 55, 56, 57, 58, 59, 60, 61, 62, 63, 66, 67, 70, 75, 76, 82, 84, 89, 92, 93, 94, 96, 97, 99, 101, 102, 105, 106, 109, 110, 112, 115, 139, 140, 142, 143, 144, 145, 147, 148, 149, 150, 151, 152, 156, 157, 158, 159, 161, 162, 164, 166, 167], "now": [0, 5, 6, 7, 13, 20, 22, 24, 26, 28, 30, 31, 32, 34, 35, 36, 37, 41, 42, 44, 54, 57, 58, 59, 68, 70, 72, 75, 77, 82, 88, 89, 94, 96, 97, 98, 99, 100, 101, 103, 104, 105, 108, 113, 115, 116, 118, 119, 120, 123, 124, 125, 126, 127, 129, 130, 132, 133, 135, 136, 137, 143, 147, 149, 153, 162, 169], "includ": [0, 2, 4, 6, 13, 18, 19, 20, 23, 24, 25, 29, 30, 31, 32, 34, 36, 37, 38, 39, 41, 43, 44, 46, 47, 49, 52, 55, 57, 59, 61, 62, 63, 65, 67, 68, 70, 71, 72, 75, 76, 78, 81, 82, 84, 86, 88, 89, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 108, 111, 113, 115, 116, 118, 119, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 140, 141, 142, 146, 148, 150, 151, 153, 154, 155, 158, 159, 161, 162, 164, 167], "h": [0, 16, 17, 18, 19, 34, 36, 37, 42, 47, 48, 49, 52, 55, 56, 63, 68, 72, 102, 115, 123, 130, 136, 141, 143, 144, 151, 162], "m": [0, 4, 17, 18, 22, 24, 30, 32, 47, 48, 51, 55, 56, 58, 59, 63, 70, 71, 75, 77, 89, 115, 122, 136, 140, 142, 151, 164, 167, 170], "": [0, 1, 3, 4, 6, 13, 17, 22, 27, 30, 31, 32, 34, 36, 37, 38, 40, 41, 42, 47, 51, 55, 56, 58, 59, 62, 63, 64, 66, 70, 75, 76, 78, 81, 84, 87, 89, 91, 92, 94, 95, 96, 97, 99, 100, 101, 102, 103, 106, 108, 110, 113, 115, 116, 124, 136, 140, 142, 147, 148, 149, 151, 158, 161, 164, 165, 166, 167], "d": [0, 4, 7, 17, 30, 32, 51, 55, 58, 63, 93, 102, 111, 116, 118, 136, 140], "describ": [0, 3, 4, 5, 6, 7, 13, 14, 16, 18, 19, 21, 28, 30, 32, 33, 34, 36, 38, 39, 41, 42, 47, 49, 50, 51, 52, 55, 56, 58, 59, 61, 63, 64, 66, 67, 70, 71, 75, 77, 78, 81, 82, 83, 94, 96, 97, 103, 109, 113, 115, 116, 118, 125, 128, 129, 135, 140, 142, 143, 147, 148, 149, 151, 158, 159, 162, 164, 166, 167, 170], "further": [0, 6, 16, 19, 27, 34, 36, 44, 52, 63, 66, 71, 96, 110, 115, 116, 135, 136, 149], "below": [0, 3, 6, 13, 15, 16, 18, 19, 20, 24, 26, 30, 31, 32, 34, 36, 42, 47, 48, 49, 55, 56, 58, 59, 62, 63, 68, 71, 75, 84, 86, 88, 90, 98, 102, 108, 111, 112, 115, 116, 118, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 140, 142, 145, 146, 147, 148, 149, 150, 151, 152, 156, 157, 158, 162, 164, 167], "case": [0, 5, 6, 8, 13, 16, 19, 21, 24, 32, 34, 36, 41, 44, 47, 48, 49, 52, 55, 62, 63, 67, 70, 71, 72, 75, 77, 82, 88, 94, 97, 99, 101, 103, 109, 111, 115, 116, 118, 120, 123, 124, 125, 126, 127, 132, 135, 136, 139, 142, 143, 149, 151, 158, 162, 164, 165, 167, 170], "title_with_t": [0, 82], "true": [0, 1, 2, 3, 5, 6, 15, 16, 29, 32, 35, 37, 42, 47, 51, 54, 55, 58, 63, 70, 77, 81, 88, 91, 94, 97, 98, 99, 103, 104, 106, 115, 118, 125, 136, 139, 140, 142, 144, 145, 148, 149, 150, 151, 152, 158, 164], "title_fonts": [0, 136], "float": [0, 3, 32, 34, 37, 47, 51, 63, 91, 94, 97, 102, 106, 109, 148, 149, 151, 152, 158, 164], "fontsiz": [0, 82], "title_kwarg": [0, 136], "ani": [0, 3, 4, 5, 6, 8, 13, 16, 18, 19, 20, 21, 22, 24, 29, 30, 31, 34, 36, 37, 38, 39, 40, 47, 48, 49, 52, 54, 55, 58, 59, 61, 62, 64, 65, 66, 68, 70, 71, 72, 74, 76, 77, 78, 82, 86, 92, 93, 94, 96, 97, 98, 99, 101, 103, 105, 109, 111, 114, 115, 116, 118, 123, 127, 129, 135, 136, 137, 139, 142, 143, 144, 147, 148, 149, 151, 158, 167, 170], "other": [0, 3, 4, 5, 6, 7, 9, 12, 13, 16, 19, 22, 24, 29, 30, 32, 35, 36, 37, 38, 39, 41, 47, 48, 49, 50, 52, 55, 56, 57, 59, 60, 61, 62, 65, 66, 68, 70, 71, 72, 75, 76, 77, 81, 84, 86, 88, 89, 91, 94, 96, 97, 98, 100, 101, 102, 105, 108, 110, 111, 115, 116, 119, 120, 122, 123, 125, 140, 143, 146, 147, 148, 151, 153, 158, 162, 164, 166, 167, 168], "kwarg": [0, 2, 3, 32, 63, 82, 109, 116, 118, 136, 147, 158], "pass": [0, 3, 16, 21, 22, 30, 32, 37, 47, 49, 55, 63, 76, 82, 88, 91, 93, 95, 101, 104, 106, 107, 109, 116, 135, 140, 150, 158, 164, 167], "plt": [0, 63, 141], "e": [0, 1, 3, 5, 8, 12, 13, 14, 16, 22, 24, 29, 30, 31, 32, 34, 36, 37, 44, 47, 49, 50, 51, 54, 55, 57, 58, 59, 60, 61, 62, 63, 64, 66, 67, 68, 70, 71, 74, 75, 76, 77, 78, 81, 84, 85, 89, 94, 96, 97, 99, 100, 101, 102, 103, 104, 107, 109, 110, 111, 115, 116, 118, 123, 124, 125, 126, 127, 135, 136, 137, 140, 142, 143, 144, 146, 147, 148, 149, 150, 151, 152, 158, 162, 164, 165, 166, 167, 170], "g": [0, 1, 3, 4, 5, 8, 12, 13, 14, 16, 17, 22, 24, 29, 30, 31, 32, 34, 36, 37, 44, 47, 49, 50, 54, 55, 58, 59, 60, 61, 62, 63, 64, 66, 68, 70, 71, 74, 75, 76, 77, 78, 81, 84, 85, 96, 99, 100, 101, 102, 103, 104, 110, 111, 115, 116, 118, 123, 124, 125, 126, 127, 135, 136, 137, 140, 142, 143, 146, 147, 148, 149, 150, 151, 152, 162, 164, 165, 167, 170], "color": [0, 2, 3, 32, 42, 55, 63, 70, 71, 81, 136, 142, 147, 164], "format": [0, 1, 3, 5, 13, 14, 27, 32, 35, 38, 39, 42, 47, 48, 50, 52, 53, 55, 57, 63, 64, 66, 70, 71, 73, 75, 81, 82, 88, 91, 97, 98, 100, 101, 103, 109, 113, 124, 125, 127, 130, 132, 135, 136, 148, 151, 158, 159, 164, 166, 168], "like": [0, 12, 13, 18, 26, 30, 31, 42, 44, 55, 58, 59, 63, 64, 71, 84, 89, 91, 94, 97, 98, 99, 102, 103, 104, 106, 110, 111, 116, 124, 140, 142, 147, 161, 162, 165], "time": [0, 1, 5, 6, 7, 10, 14, 16, 18, 19, 22, 24, 27, 29, 30, 32, 34, 36, 37, 38, 39, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 55, 57, 58, 63, 64, 71, 72, 75, 76, 77, 78, 82, 86, 88, 91, 92, 96, 97, 98, 104, 106, 108, 115, 116, 118, 119, 122, 124, 125, 127, 128, 129, 132, 135, 136, 137, 139, 140, 142, 144, 146, 147, 150, 152, 158, 162, 165, 166, 170], "t": [0, 1, 4, 5, 12, 13, 17, 19, 26, 29, 30, 31, 32, 34, 36, 37, 42, 47, 49, 58, 59, 62, 64, 66, 67, 70, 71, 75, 76, 77, 82, 84, 88, 89, 92, 93, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 108, 110, 116, 122, 131, 135, 136, 142, 148, 150, 152, 158, 162, 164, 165, 167, 168, 170], "14": [0, 34, 55, 75, 82, 134, 135, 138, 142], "8e": [0, 82], "And": [0, 6, 19, 22, 58, 61], "rather": [0, 5, 6, 18, 22, 24, 30, 31, 34, 36, 37, 42, 58, 59, 62, 66, 67, 68, 74, 75, 94, 99, 101, 104, 111, 112, 115, 118, 123, 124, 125, 127, 129, 130, 132, 135, 136, 138, 139, 142, 147, 148, 149, 158, 159, 162, 164, 167, 170], "than": [0, 3, 5, 6, 13, 16, 18, 19, 22, 24, 30, 31, 32, 34, 36, 37, 42, 47, 49, 55, 58, 59, 62, 63, 64, 66, 67, 68, 70, 72, 74, 75, 77, 81, 84, 88, 89, 91, 94, 97, 98, 99, 101, 102, 104, 109, 111, 115, 116, 118, 119, 122, 123, 124, 125, 126, 127, 129, 130, 132, 135, 136, 138, 139, 142, 143, 144, 147, 148, 149, 151, 158, 159, 161, 162, 164, 167, 170], "8f": [0, 82], "001": [0, 36, 82, 92], "1000": [0, 57, 71, 82, 162], "A": [0, 2, 3, 4, 5, 6, 7, 11, 17, 18, 21, 22, 24, 31, 32, 37, 38, 39, 45, 48, 49, 51, 55, 58, 59, 63, 64, 65, 66, 68, 71, 75, 84, 86, 88, 89, 93, 94, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 108, 115, 116, 119, 125, 127, 128, 129, 130, 132, 135, 136, 140, 141, 148, 151, 158, 164, 170], "differ": [0, 1, 3, 6, 7, 12, 15, 16, 18, 19, 24, 30, 31, 32, 33, 36, 37, 38, 39, 42, 47, 49, 50, 52, 54, 57, 61, 63, 66, 68, 70, 71, 75, 76, 81, 84, 88, 89, 91, 93, 94, 96, 97, 102, 104, 109, 110, 111, 112, 115, 116, 123, 124, 125, 126, 127, 130, 132, 133, 140, 143, 144, 145, 146, 148, 149, 150, 151, 156, 157, 162, 164, 165, 166, 167, 170], "title_t_format": [0, 136], "contain": [0, 1, 3, 5, 12, 13, 18, 19, 22, 25, 27, 28, 32, 34, 35, 36, 37, 38, 39, 40, 43, 45, 46, 47, 48, 49, 51, 53, 54, 55, 56, 57, 58, 59, 63, 64, 66, 67, 70, 71, 77, 78, 82, 84, 85, 88, 89, 91, 92, 94, 96, 97, 99, 101, 102, 103, 104, 106, 108, 109, 110, 111, 115, 116, 119, 120, 127, 128, 138, 140, 142, 147, 148, 151, 153, 158, 162, 164, 165, 167], "i": [0, 1, 2, 3, 4, 5, 6, 7, 8, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 46, 47, 48, 49, 50, 51, 52, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 70, 71, 72, 73, 74, 75, 76, 77, 81, 82, 83, 84, 85, 86, 88, 89, 90, 91, 92, 94, 95, 96, 97, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 122, 123, 124, 125, 126, 127, 128, 129, 130, 132, 134, 135, 136, 137, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 154, 155, 156, 157, 158, 159, 160, 161, 162, 164, 165, 166, 167, 168, 169, 170], "dai": [0, 6, 13, 55, 136, 151], "hour": [0, 13, 36, 55, 63, 136], "minut": [0, 36, 42, 51, 55, 58, 63, 136, 143, 164, 166], "second": [0, 3, 16, 18, 19, 32, 34, 39, 47, 49, 51, 55, 63, 71, 88, 94, 98, 104, 115, 119, 125, 136, 139, 148, 151, 158, 160, 161, 164, 167, 170], "otherwis": [0, 5, 32, 58, 62, 65, 70, 86, 98, 102, 103, 104, 105, 106, 109, 115, 136, 137, 148, 154, 164], "you": [0, 2, 3, 4, 5, 12, 13, 14, 15, 16, 18, 19, 20, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 34, 35, 36, 37, 38, 39, 40, 41, 43, 44, 45, 47, 51, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 66, 67, 70, 71, 74, 75, 76, 77, 78, 80, 81, 82, 84, 85, 86, 88, 89, 90, 91, 93, 96, 97, 98, 99, 100, 101, 102, 104, 105, 106, 107, 108, 110, 111, 112, 113, 114, 116, 118, 119, 124, 125, 126, 127, 130, 132, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 149, 150, 151, 152, 153, 155, 156, 157, 158, 160, 162, 165, 166, 167, 169], "could": [0, 5, 12, 13, 29, 34, 37, 38, 39, 42, 47, 57, 58, 64, 70, 72, 75, 76, 77, 82, 84, 88, 94, 98, 106, 107, 111, 123, 132, 142, 144, 149, 150, 151, 152, 164, 167], "plotax": [0, 3, 47, 82, 130, 147], "surfac": [0, 17, 24, 27, 32, 34, 36, 37, 42, 47, 48, 50, 52, 55, 72, 75, 81, 83, 89, 96, 108, 112, 115, 123, 142, 143, 151, 162], "elev": [0, 24, 27, 34, 42, 48, 50, 52, 55, 57, 63, 72, 81, 112, 115, 130, 142, 143, 151, 162, 164, 166], "after": [0, 1, 3, 5, 6, 12, 13, 21, 25, 29, 30, 31, 34, 35, 36, 38, 39, 42, 47, 49, 52, 58, 59, 61, 63, 64, 66, 67, 70, 71, 77, 82, 89, 90, 91, 93, 98, 104, 106, 111, 115, 116, 118, 119, 123, 124, 136, 141, 144, 148, 149, 150, 152, 158, 167], "earthquak": [0, 19, 27, 32, 48, 49, 52, 114, 144, 151, 159, 162], "none": [0, 1, 2, 3, 16, 26, 29, 32, 35, 37, 42, 47, 51, 55, 63, 70, 77, 91, 94, 97, 98, 103, 104, 106, 109, 116, 118, 119, 125, 127, 128, 129, 130, 131, 134, 135, 136, 139, 148, 150, 152, 158, 164], "instead": [0, 2, 3, 13, 19, 34, 38, 39, 42, 44, 47, 49, 56, 58, 59, 62, 66, 67, 105, 106, 109, 111, 124, 125, 128, 132, 135, 139, 140, 141, 142, 151, 162, 164], "convent": [0, 3, 24, 32, 50, 57, 75, 102, 162], "mention": [0, 19, 96, 148, 149], "abov": [0, 3, 5, 13, 14, 16, 19, 22, 30, 34, 36, 38, 39, 41, 42, 43, 44, 47, 49, 52, 55, 57, 58, 59, 62, 65, 67, 70, 72, 75, 77, 82, 85, 86, 89, 98, 100, 105, 108, 109, 115, 118, 125, 127, 132, 135, 140, 142, 144, 146, 147, 148, 150, 151, 152, 158, 161, 162, 164, 167], "intern": [0, 6, 32, 47, 57, 63, 75, 125, 149, 162, 164, 170], "t_str": 0, "title_str": 0, "xlimit": [0, 47, 55, 130], "arrai": [0, 3, 6, 15, 19, 22, 24, 29, 32, 34, 35, 37, 41, 47, 48, 51, 53, 57, 63, 82, 88, 89, 91, 92, 94, 96, 97, 98, 101, 102, 103, 104, 106, 108, 109, 110, 119, 120, 121, 125, 127, 130, 132, 136, 140, 141, 142, 145, 148, 149, 150, 151, 152, 158, 162, 164, 167], "xmin": [0, 37], "xmax": [0, 37], "auto": [0, 47, 89], "x": [0, 2, 3, 5, 8, 13, 16, 19, 22, 25, 27, 29, 30, 31, 32, 34, 35, 36, 37, 41, 42, 45, 47, 48, 49, 50, 51, 55, 56, 57, 58, 59, 63, 70, 71, 72, 75, 77, 81, 82, 85, 88, 91, 92, 94, 95, 96, 98, 99, 101, 102, 103, 106, 107, 108, 110, 115, 116, 118, 130, 136, 140, 141, 142, 144, 148, 149, 150, 151, 162, 164, 167, 170], "limit": [0, 4, 6, 12, 27, 32, 35, 41, 52, 55, 63, 65, 71, 76, 81, 86, 88, 89, 94, 96, 104, 115, 121, 142, 148, 149, 150, 152, 162, 164, 170], "an": [0, 1, 2, 3, 4, 5, 6, 9, 11, 12, 16, 17, 18, 19, 22, 24, 26, 27, 29, 30, 31, 32, 34, 35, 36, 37, 41, 42, 43, 44, 47, 48, 49, 51, 52, 54, 59, 60, 61, 62, 63, 67, 68, 71, 72, 75, 76, 77, 81, 82, 84, 86, 88, 89, 90, 91, 94, 95, 96, 97, 98, 100, 101, 102, 103, 104, 105, 107, 108, 109, 111, 113, 116, 117, 119, 121, 123, 124, 125, 127, 128, 129, 130, 132, 133, 135, 136, 137, 139, 140, 141, 142, 144, 147, 148, 149, 151, 153, 156, 157, 158, 159, 162, 164, 165, 166, 167], "two": [0, 3, 4, 7, 8, 15, 17, 18, 24, 27, 30, 32, 34, 36, 37, 47, 48, 49, 51, 55, 56, 58, 63, 71, 72, 77, 82, 88, 94, 97, 98, 101, 104, 107, 109, 113, 114, 115, 116, 118, 119, 123, 124, 127, 129, 139, 140, 142, 145, 146, 150, 162, 164, 167, 170], "element": [0, 3, 24, 37, 63, 102, 104, 106, 148, 149, 150, 151], "choos": [0, 7, 60, 62, 63, 75, 101, 118, 148, 151], "automat": [0, 2, 3, 8, 11, 16, 32, 38, 39, 44, 55, 59, 66, 81, 82, 84, 88, 93, 97, 99, 105, 106, 107, 109, 116, 119, 130, 132, 148, 149, 151, 162], "ylimit": [0, 47, 55, 130, 147], "ymin": [0, 37], "ymax": [0, 37], "y": [0, 2, 3, 4, 8, 16, 17, 19, 29, 32, 34, 35, 36, 37, 41, 42, 47, 49, 50, 51, 55, 57, 59, 63, 70, 71, 75, 77, 88, 94, 98, 99, 101, 115, 118, 126, 136, 140, 141, 142, 144, 148, 149, 150, 151, 162, 164], "xticks_fonts": [0, 136], "xtick": [0, 42, 53], "mark": [0, 16, 55, 70, 115, 116], "label": [0, 32, 36, 53, 55, 57, 63, 118, 123, 135, 136, 142, 162, 164], "xticks_kwarg": [0, 136], "dictionari": [0, 1, 2, 3, 32, 37, 47, 64, 82, 88, 91, 97, 102, 103, 106, 108, 111, 158, 162, 164], "locat": [0, 5, 6, 7, 13, 19, 32, 34, 36, 49, 50, 51, 55, 57, 62, 64, 71, 72, 77, 94, 98, 100, 102, 103, 109, 111, 113, 115, 124, 126, 143, 144, 151, 158, 159, 164], "xlabel": [0, 136], "xlabel_fonts": [0, 136], "xlabel_kwarg": [0, 136], "yticks_fonts": [0, 136], "ytick": 0, "yticks_kwarg": [0, 136], "ylabel": [0, 136], "ylabel_fonts": [0, 136], "ylabel_kwarg": [0, 136], "aspect": [0, 12, 26, 31, 46, 52, 53, 71, 136, 164], "ratio": [0, 3, 6, 15, 24, 49, 53, 71, 75, 92, 102, 104, 145, 148, 149, 150], "gca": [0, 42, 53, 70], "set_aspect": [0, 42, 53, 70], "aspect_latitud": [0, 136], "longitud": [0, 32, 34, 37, 50, 51, 57, 63, 70, 75, 81, 123, 142, 151, 158, 164], "latitud": [0, 15, 32, 34, 37, 49, 50, 51, 57, 75, 81, 123, 142, 145, 151, 154, 158, 164], "coordin": [0, 4, 25, 32, 34, 36, 48, 51, 63, 77, 81, 88, 94, 98, 99, 108, 115, 142, 151, 164], "chose": [0, 68, 137], "so": [0, 5, 6, 8, 9, 13, 16, 18, 19, 21, 24, 29, 30, 31, 32, 35, 36, 37, 38, 39, 41, 42, 43, 44, 45, 47, 49, 52, 53, 55, 56, 57, 58, 59, 60, 63, 64, 66, 67, 70, 71, 72, 75, 76, 77, 78, 81, 82, 85, 88, 89, 90, 97, 98, 101, 106, 108, 109, 113, 115, 116, 118, 119, 120, 124, 125, 126, 127, 128, 129, 130, 132, 135, 136, 140, 142, 143, 144, 147, 148, 149, 150, 151, 154, 158, 161, 162, 164, 166, 167, 168], "distanc": [0, 32, 36, 49, 51, 55, 75, 151, 162, 164], "meter": [0, 18, 19, 32, 49, 51, 55, 70, 72, 75, 115, 143, 151, 158, 164, 166], "same": [0, 3, 5, 6, 8, 13, 16, 18, 19, 24, 27, 30, 33, 34, 35, 36, 37, 42, 44, 47, 49, 50, 51, 52, 55, 57, 58, 59, 62, 63, 64, 66, 68, 70, 75, 77, 78, 81, 82, 83, 84, 88, 92, 94, 96, 97, 98, 101, 102, 104, 109, 110, 118, 119, 120, 124, 125, 130, 132, 136, 139, 140, 142, 148, 149, 150, 151, 156, 162, 164, 167], "cover": [0, 6, 7, 29, 30, 32, 34, 36, 37, 41, 42, 55, 63, 70, 75, 115, 120, 125, 144, 150, 162], "broad": [0, 164], "rang": [0, 3, 5, 13, 32, 47, 51, 55, 115, 119, 124, 141, 142], "middl": [0, 102, 124], "most": [0, 3, 19, 22, 24, 29, 31, 34, 36, 38, 39, 43, 44, 47, 49, 52, 54, 55, 56, 57, 58, 61, 63, 66, 70, 71, 76, 77, 78, 81, 82, 84, 86, 94, 98, 99, 104, 107, 108, 110, 115, 116, 118, 124, 126, 132, 135, 137, 138, 139, 140, 141, 142, 143, 147, 148, 149, 151, 154, 155, 167], "interest": [0, 5, 12, 16, 17, 19, 20, 25, 29, 31, 34, 36, 37, 42, 53, 71, 72, 89, 106, 113, 115, 116, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 144, 148, 158], "gener": [0, 1, 2, 3, 4, 5, 6, 7, 9, 11, 13, 14, 16, 17, 18, 19, 21, 22, 26, 27, 30, 31, 34, 36, 41, 42, 43, 44, 47, 48, 49, 52, 55, 57, 59, 61, 64, 66, 67, 68, 72, 75, 76, 77, 81, 82, 83, 84, 86, 89, 90, 92, 94, 99, 100, 101, 103, 104, 105, 108, 109, 111, 113, 115, 119, 123, 125, 136, 139, 142, 143, 146, 148, 149, 153, 159, 161, 162, 167, 168], "appropri": [0, 4, 5, 6, 13, 16, 19, 26, 30, 48, 52, 53, 55, 59, 61, 63, 64, 68, 71, 74, 76, 88, 91, 92, 93, 97, 99, 100, 101, 102, 103, 116, 129, 140, 143, 148, 158, 167, 170], "valu": [0, 3, 5, 6, 7, 16, 18, 19, 22, 24, 29, 32, 35, 36, 37, 38, 39, 41, 42, 44, 47, 48, 49, 51, 53, 54, 55, 57, 63, 64, 66, 68, 70, 71, 72, 75, 76, 77, 82, 89, 94, 96, 97, 98, 101, 102, 103, 104, 106, 108, 109, 115, 116, 119, 120, 122, 123, 125, 127, 129, 130, 132, 135, 139, 140, 142, 143, 144, 148, 149, 150, 151, 152, 154, 158, 159, 162, 164, 165, 167, 170], "np": [0, 32, 41, 88, 94, 98, 101, 141, 150], "co": [0, 26, 32, 37, 42, 51, 53, 59, 70, 88, 101, 144], "pi": [0, 42, 51, 53, 70, 88, 101], "180": [0, 32, 42, 53, 63, 70, 75], "useoffset": [0, 42, 53, 136], "boolean": [0, 3, 55, 70, 97, 102, 148, 149, 151], "tick": [0, 55, 136], "mai": [0, 1, 2, 3, 4, 5, 6, 12, 13, 17, 19, 20, 21, 22, 24, 25, 26, 27, 29, 30, 31, 32, 34, 36, 37, 38, 39, 40, 42, 43, 44, 49, 50, 51, 52, 53, 55, 57, 58, 61, 62, 65, 66, 68, 70, 71, 72, 75, 76, 81, 82, 84, 85, 86, 89, 90, 93, 94, 96, 97, 98, 101, 103, 104, 107, 109, 111, 115, 116, 118, 121, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 142, 143, 144, 146, 147, 148, 149, 150, 151, 158, 159, 160, 162, 164, 165, 167], "offset": [0, 53, 55, 63, 158, 164], "from": [0, 1, 3, 4, 5, 6, 7, 12, 14, 15, 16, 17, 18, 19, 20, 25, 28, 29, 31, 34, 36, 38, 39, 41, 46, 47, 48, 49, 52, 55, 56, 57, 59, 60, 61, 62, 64, 65, 66, 67, 71, 72, 74, 75, 77, 81, 82, 86, 87, 88, 90, 91, 94, 95, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 108, 109, 111, 112, 113, 115, 116, 118, 119, 120, 123, 124, 125, 127, 130, 131, 132, 135, 136, 137, 138, 139, 140, 141, 143, 144, 145, 148, 149, 150, 151, 152, 154, 156, 157, 158, 159, 160, 162, 165, 166, 167, 168], "some": [0, 3, 4, 5, 6, 7, 8, 10, 12, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 27, 29, 30, 32, 34, 36, 37, 38, 39, 42, 44, 47, 48, 49, 50, 52, 53, 55, 56, 57, 58, 59, 62, 67, 70, 75, 76, 77, 81, 83, 84, 86, 89, 90, 92, 96, 97, 98, 100, 101, 103, 105, 106, 107, 108, 110, 111, 113, 114, 115, 116, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 140, 142, 143, 144, 147, 148, 149, 150, 152, 153, 154, 158, 159, 161, 162, 164, 167], "common": [0, 3, 18, 19, 25, 30, 38, 39, 43, 44, 66, 67, 78, 81, 88, 102, 104, 106, 107, 118, 125, 127, 130, 136, 165, 167], "print": [0, 1, 3, 7, 31, 37, 42, 55, 57, 63, 64, 70, 71, 82, 94, 98, 99, 100, 106, 108, 110, 111, 119, 120, 123, 125, 126, 127, 134, 142, 148, 150, 152, 158, 165], "corner": [0, 3, 32, 34, 57, 75, 77, 94, 142, 148, 150, 152, 162, 164], "often": [0, 6, 11, 13, 16, 19, 22, 29, 31, 34, 37, 38, 39, 43, 44, 47, 48, 52, 53, 54, 63, 64, 68, 72, 75, 77, 98, 110, 111, 115, 116, 132, 136, 139, 140, 142, 143, 144, 147, 148, 151, 158, 162, 166, 167, 170], "nicer": [0, 84, 136], "full": [0, 5, 6, 14, 19, 37, 59, 61, 62, 63, 77, 82, 91, 98, 104, 108, 135, 146, 148, 162, 167], "each": [0, 1, 2, 3, 5, 6, 7, 12, 16, 18, 19, 20, 24, 32, 34, 36, 37, 45, 47, 49, 51, 55, 57, 58, 59, 63, 64, 67, 70, 71, 72, 75, 76, 77, 80, 81, 82, 84, 88, 89, 92, 94, 97, 98, 99, 101, 102, 103, 104, 106, 108, 115, 116, 118, 119, 120, 124, 125, 127, 128, 130, 135, 136, 137, 139, 140, 141, 142, 144, 147, 148, 149, 150, 151, 152, 158, 161, 162, 164, 166, 170], "which": [0, 1, 3, 4, 5, 6, 7, 11, 12, 13, 14, 16, 18, 19, 22, 24, 27, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 45, 46, 47, 49, 50, 52, 55, 57, 58, 59, 60, 61, 62, 63, 64, 66, 68, 70, 71, 72, 75, 76, 77, 82, 84, 85, 88, 89, 91, 92, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 107, 108, 109, 110, 113, 115, 116, 118, 119, 120, 123, 125, 127, 128, 130, 132, 135, 136, 137, 139, 140, 141, 142, 143, 144, 148, 149, 150, 151, 154, 158, 159, 162, 164, 166, 167, 169, 170], "should": [0, 1, 2, 3, 4, 5, 6, 12, 13, 14, 16, 19, 20, 21, 22, 24, 25, 27, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 47, 49, 52, 55, 57, 58, 59, 60, 61, 62, 63, 66, 68, 70, 71, 74, 75, 76, 77, 81, 82, 84, 89, 94, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 108, 109, 111, 112, 115, 116, 118, 119, 120, 123, 125, 126, 127, 130, 135, 136, 137, 139, 140, 141, 143, 144, 146, 147, 148, 149, 150, 151, 152, 153, 158, 160, 162, 164, 165, 167, 169, 170], "ticklabel_format": [0, 42, 53], "issu": [0, 19, 24, 26, 28, 58, 59, 62, 71, 88, 93, 94, 96, 104, 105, 107, 116, 118, 119, 124, 125, 126, 127, 140, 151, 165], "grid": [0, 4, 7, 17, 18, 19, 21, 22, 24, 25, 27, 29, 30, 41, 42, 47, 48, 50, 52, 55, 56, 63, 70, 71, 72, 77, 78, 81, 86, 88, 96, 97, 98, 99, 101, 102, 103, 104, 106, 108, 115, 116, 118, 119, 120, 122, 123, 125, 126, 127, 130, 132, 134, 135, 136, 137, 140, 141, 142, 143, 144, 148, 149, 150, 152, 159, 161, 162, 164, 166, 167, 170], "grid_kwarg": [0, 136], "add": [0, 11, 12, 13, 16, 17, 18, 19, 29, 30, 32, 47, 51, 55, 58, 59, 61, 62, 67, 70, 71, 75, 81, 88, 93, 94, 98, 99, 101, 109, 118, 120, 123, 125, 126, 127, 130, 136, 141, 152, 154, 158, 162, 164, 168], "line": [0, 1, 3, 4, 16, 19, 30, 31, 32, 34, 35, 42, 44, 47, 48, 49, 50, 51, 54, 55, 57, 58, 63, 64, 66, 67, 71, 77, 81, 82, 96, 97, 99, 104, 108, 109, 110, 111, 118, 119, 120, 123, 125, 132, 136, 137, 142, 147, 148, 150, 158, 162, 164], "linewidth": [0, 82, 142], "afterax": [0, 29, 47, 55, 82, 136], "function": [0, 1, 2, 3, 5, 7, 15, 17, 18, 19, 24, 25, 27, 29, 30, 32, 34, 37, 42, 47, 48, 49, 54, 55, 57, 66, 67, 68, 72, 75, 81, 82, 83, 88, 89, 91, 92, 93, 94, 95, 97, 100, 101, 102, 103, 106, 109, 110, 115, 116, 118, 119, 120, 123, 124, 125, 126, 127, 132, 135, 136, 140, 142, 144, 145, 147, 148, 149, 150, 151, 152, 158, 162, 163, 164, 165, 167], "execut": [0, 1, 3, 14, 16, 19, 21, 29, 31, 34, 38, 39, 47, 63, 71, 82, 84, 91, 93, 99, 111, 116, 118, 140, 146, 165], "exec": [0, 1, 3, 82], "defin": [0, 1, 3, 5, 6, 7, 24, 29, 32, 34, 36, 37, 41, 42, 44, 55, 63, 64, 66, 70, 71, 75, 82, 84, 88, 91, 94, 100, 101, 103, 104, 106, 108, 109, 115, 119, 127, 132, 136, 140, 150, 152, 158, 162, 164, 165, 167, 170], "have": [0, 1, 2, 3, 4, 5, 6, 8, 9, 11, 12, 13, 14, 16, 18, 19, 20, 22, 24, 25, 26, 27, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 42, 44, 45, 47, 48, 49, 51, 52, 55, 56, 58, 59, 60, 62, 66, 67, 68, 70, 71, 72, 75, 76, 77, 81, 82, 84, 85, 86, 88, 89, 92, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 111, 113, 115, 116, 118, 119, 120, 122, 123, 124, 125, 126, 127, 129, 130, 132, 133, 135, 136, 137, 139, 140, 141, 142, 143, 148, 149, 151, 153, 154, 158, 162, 164, 165, 167], "argument": [0, 1, 2, 3, 29, 32, 37, 48, 51, 54, 55, 57, 82, 88, 89, 93, 94, 97, 101, 103, 104, 106, 109, 116, 127, 136, 140, 142, 147, 148, 149, 158, 164, 167], "current_data": [0, 3, 27, 47, 81, 82], "version": [0, 1, 4, 5, 6, 7, 8, 9, 11, 13, 15, 16, 18, 19, 22, 24, 25, 30, 32, 34, 36, 41, 42, 44, 45, 47, 48, 49, 50, 52, 55, 57, 60, 61, 63, 64, 67, 68, 70, 71, 75, 76, 78, 81, 82, 84, 85, 89, 92, 96, 97, 99, 102, 104, 105, 107, 110, 112, 115, 116, 118, 119, 120, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 138, 140, 141, 142, 144, 145, 146, 148, 149, 150, 151, 152, 156, 157, 158, 162, 164, 167, 170], "liner": [0, 32], "pylab": [0, 42, 82], "my": [0, 22, 24, 57, 77, 89, 99, 150, 162], "custom": [0, 13, 16, 22, 24, 27, 67, 71, 78, 81, 89, 95, 101, 144], "sinc": [0, 3, 4, 5, 6, 16, 19, 22, 24, 30, 34, 36, 42, 44, 45, 51, 52, 55, 57, 58, 59, 62, 63, 66, 67, 72, 75, 76, 77, 81, 82, 88, 89, 90, 97, 98, 115, 116, 118, 119, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 142, 143, 148, 149, 151, 162, 165, 166], "ha": [0, 4, 5, 6, 8, 12, 13, 14, 16, 18, 19, 20, 22, 23, 24, 25, 26, 29, 30, 31, 34, 36, 37, 38, 39, 42, 45, 47, 49, 54, 55, 56, 57, 58, 59, 63, 64, 66, 68, 70, 71, 72, 75, 77, 78, 82, 86, 89, 91, 94, 98, 101, 102, 103, 106, 107, 109, 111, 112, 113, 115, 116, 117, 118, 119, 120, 125, 126, 127, 128, 129, 130, 132, 135, 136, 137, 138, 140, 142, 143, 148, 149, 151, 154, 158, 161, 162, 164, 167, 168, 170], "been": [0, 1, 4, 5, 8, 9, 13, 14, 16, 18, 19, 20, 22, 23, 24, 26, 27, 29, 30, 31, 34, 35, 36, 37, 38, 39, 42, 45, 47, 48, 49, 52, 55, 56, 57, 58, 59, 64, 66, 68, 70, 71, 75, 78, 82, 84, 86, 89, 91, 97, 98, 102, 103, 106, 107, 108, 109, 111, 113, 115, 117, 118, 119, 120, 122, 125, 126, 127, 128, 129, 130, 132, 133, 135, 136, 137, 139, 140, 142, 148, 149, 151, 154, 162, 164, 167], "import": [0, 3, 5, 18, 19, 24, 30, 34, 36, 40, 41, 42, 47, 51, 52, 55, 57, 60, 62, 63, 67, 68, 70, 75, 78, 82, 84, 88, 89, 91, 93, 94, 96, 97, 98, 99, 100, 101, 103, 104, 105, 106, 108, 116, 118, 125, 130, 140, 141, 142, 143, 144, 148, 149, 150, 151, 152, 154, 162, 164, 166, 168], "modul": [0, 7, 8, 12, 18, 19, 27, 30, 31, 34, 36, 42, 44, 48, 49, 53, 55, 56, 57, 62, 64, 67, 70, 75, 76, 81, 82, 83, 84, 88, 89, 92, 93, 97, 101, 102, 103, 106, 110, 111, 116, 118, 120, 121, 123, 126, 127, 128, 129, 130, 137, 139, 142, 148, 149, 151, 158, 162, 163], "form": [0, 2, 3, 4, 5, 6, 8, 12, 19, 21, 22, 24, 26, 30, 31, 32, 34, 36, 38, 39, 41, 45, 46, 47, 49, 51, 55, 59, 64, 65, 68, 75, 77, 86, 89, 98, 102, 104, 108, 109, 115, 120, 127, 128, 129, 130, 139, 140, 142, 148, 149, 150, 151, 156, 162, 164, 167, 170], "better": [0, 6, 18, 19, 24, 34, 42, 47, 49, 70, 71, 72, 76, 77, 81, 104, 113, 115, 118, 124, 125, 126, 129, 130, 132, 133], "want": [0, 2, 3, 10, 12, 13, 14, 19, 21, 22, 26, 30, 31, 34, 35, 36, 37, 38, 39, 40, 42, 43, 44, 47, 51, 54, 55, 58, 59, 61, 62, 63, 66, 67, 68, 70, 76, 77, 82, 84, 88, 89, 90, 91, 97, 98, 99, 111, 114, 116, 124, 127, 130, 136, 138, 140, 141, 142, 146, 147, 150, 155, 158, 162, 164, 165], "do": [0, 1, 4, 6, 8, 11, 12, 13, 15, 18, 19, 21, 22, 27, 30, 31, 34, 35, 36, 38, 39, 40, 42, 43, 44, 47, 52, 54, 55, 56, 58, 61, 62, 66, 67, 70, 75, 76, 77, 82, 84, 88, 89, 93, 94, 96, 97, 98, 99, 100, 101, 105, 107, 108, 109, 111, 114, 115, 116, 118, 119, 123, 124, 125, 126, 127, 129, 130, 132, 135, 136, 144, 145, 147, 148, 149, 150, 151, 156, 157, 158, 160, 162, 165, 167, 168], "sever": [0, 1, 2, 5, 10, 12, 16, 19, 22, 24, 25, 26, 31, 32, 36, 37, 38, 39, 43, 47, 50, 52, 55, 59, 62, 64, 71, 72, 75, 81, 105, 115, 116, 117, 119, 120, 123, 124, 125, 126, 128, 129, 130, 132, 142, 147, 151, 160, 162, 164, 167], "thing": [0, 13, 16, 19, 24, 30, 31, 42, 52, 58, 63, 84, 93, 115, 116, 118, 126, 131, 139], "need": [0, 4, 5, 6, 12, 13, 15, 16, 18, 19, 20, 21, 22, 24, 29, 30, 31, 34, 35, 36, 37, 38, 39, 40, 42, 43, 44, 47, 49, 52, 53, 57, 58, 59, 60, 62, 63, 64, 66, 67, 70, 71, 75, 76, 77, 78, 84, 85, 88, 89, 91, 96, 97, 98, 99, 101, 104, 108, 110, 111, 113, 115, 116, 118, 120, 124, 125, 127, 128, 132, 134, 135, 136, 137, 139, 140, 142, 144, 145, 146, 148, 149, 150, 151, 152, 156, 157, 158, 159, 160, 162, 164, 166, 167, 170], "access": [0, 17, 29, 31, 59, 62, 93, 94, 96, 104, 106, 109], "data": [0, 1, 3, 5, 18, 19, 27, 29, 32, 34, 35, 36, 37, 38, 39, 41, 42, 43, 45, 47, 48, 50, 51, 57, 58, 63, 64, 65, 66, 70, 71, 73, 81, 82, 83, 84, 86, 88, 91, 94, 97, 98, 100, 102, 103, 104, 106, 109, 112, 113, 114, 115, 118, 119, 121, 122, 124, 125, 127, 128, 129, 130, 132, 136, 137, 139, 140, 142, 143, 149, 150, 152, 158, 161, 163, 168], "store": [0, 1, 13, 19, 35, 37, 43, 55, 57, 58, 71, 77, 97, 98, 101, 106, 107, 108, 116, 119, 125, 147, 149, 151, 158, 161, 162, 164], "def": [0, 1, 3, 47, 55, 70, 82, 88, 94, 98, 101, 104, 150, 152, 158], "1d": [0, 4, 7, 15, 19, 21, 24, 27, 31, 32, 37, 48, 49, 63, 67, 71, 72, 81, 82, 88, 96, 99, 100, 102, 104, 110, 112, 118, 123, 126, 128, 129, 137, 140, 141, 145, 149, 157, 164, 167], "alreadi": [0, 1, 6, 12, 13, 19, 20, 30, 31, 44, 59, 60, 62, 63, 64, 70, 84, 85, 99, 103, 105, 108, 110, 118, 120, 128, 135, 136, 137, 146, 164], "xlower": [0, 3, 16, 24, 29, 42, 49, 89, 127, 150, 152, 162, 164, 167], "xupper": [0, 24, 49, 150, 152, 164], "k": [0, 3, 4, 6, 17, 71, 92, 97, 102, 108, 142], "get": [0, 10, 13, 19, 26, 30, 43, 48, 55, 57, 58, 60, 61, 62, 66, 67, 70, 81, 85, 88, 89, 94, 97, 98, 99, 105, 107, 108, 109, 110, 113, 114, 116, 126, 140, 142, 149, 158, 164, 165], "variabl": [0, 3, 5, 13, 14, 18, 19, 24, 27, 29, 30, 32, 34, 37, 38, 39, 40, 43, 47, 48, 49, 54, 55, 58, 61, 62, 71, 74, 76, 77, 78, 82, 88, 89, 97, 99, 103, 104, 106, 107, 109, 111, 118, 123, 124, 125, 127, 129, 135, 136, 139, 140, 148, 149, 150, 152, 158, 162, 164, 165, 167], "just": [0, 6, 30, 34, 43, 58, 59, 88, 89, 91, 93, 97, 98, 99, 100, 101, 106, 109, 120, 127, 148, 167], "avail": [0, 4, 5, 10, 12, 16, 24, 25, 31, 34, 36, 42, 46, 47, 50, 52, 55, 62, 66, 70, 71, 72, 78, 81, 83, 84, 88, 91, 96, 97, 98, 100, 102, 104, 107, 108, 109, 110, 111, 115, 126, 137, 140, 141, 143, 148, 150, 153, 158, 159, 162], "var": [0, 3, 13, 29, 37, 158], "min": [0, 102, 164, 170], "max": [0, 32, 34, 42, 71, 102, 115, 120, 144, 150, 152, 164, 170], "primarili": [0, 19, 56, 77, 127, 128], "where": [0, 1, 3, 5, 6, 12, 13, 16, 18, 19, 24, 29, 32, 34, 36, 37, 38, 39, 41, 42, 43, 47, 48, 49, 52, 55, 57, 62, 63, 64, 66, 68, 70, 71, 72, 77, 78, 84, 91, 94, 95, 96, 97, 99, 102, 111, 115, 118, 119, 120, 123, 124, 125, 130, 132, 139, 141, 142, 143, 144, 147, 148, 149, 150, 151, 152, 158, 161, 162, 164, 167, 170], "horizont": [0, 55, 164], "implement": [0, 1, 4, 5, 7, 14, 16, 18, 19, 32, 42, 49, 63, 64, 67, 74, 86, 101, 102, 104, 108, 109, 116, 122, 125, 128, 130, 132, 140, 141, 148, 164, 167, 170], "claw": [0, 5, 6, 8, 11, 12, 13, 14, 15, 16, 18, 19, 21, 22, 24, 26, 30, 32, 34, 35, 36, 37, 38, 39, 40, 41, 43, 44, 46, 47, 48, 49, 51, 53, 54, 56, 58, 59, 61, 62, 63, 66, 67, 71, 74, 75, 76, 83, 88, 91, 93, 96, 97, 98, 99, 105, 107, 111, 112, 113, 114, 115, 116, 118, 119, 120, 122, 123, 126, 127, 129, 135, 136, 140, 144, 145, 150, 151, 152, 154, 155, 156, 157, 160, 161, 162, 164, 165, 167, 168], "visclaw": [0, 1, 7, 13, 24, 25, 26, 30, 36, 42, 47, 48, 50, 53, 55, 59, 60, 61, 62, 66, 70, 71, 78, 82, 83, 84, 85, 96, 100, 105, 111, 146, 147, 153], "src": [0, 5, 6, 11, 14, 15, 16, 18, 19, 21, 22, 30, 32, 34, 35, 36, 37, 42, 43, 44, 49, 51, 54, 56, 59, 62, 63, 66, 67, 71, 75, 76, 83, 100, 101, 109, 111, 112, 115, 116, 118, 120, 123, 124, 126, 127, 128, 129, 130, 132, 136, 137, 140, 144, 145, 148, 150, 152, 154, 156, 164, 165, 170], "python": [0, 3, 4, 7, 8, 11, 13, 14, 17, 21, 24, 25, 27, 29, 30, 31, 32, 35, 36, 37, 38, 39, 40, 43, 45, 47, 48, 50, 51, 54, 55, 57, 58, 59, 60, 61, 62, 63, 75, 77, 78, 81, 82, 83, 86, 87, 89, 93, 94, 96, 97, 99, 100, 101, 102, 104, 107, 108, 109, 116, 118, 120, 121, 123, 125, 126, 127, 128, 129, 132, 136, 137, 140, 141, 146, 151, 162, 164, 165, 168], "gaugetool": [0, 47, 123], "time_scal": 0, "scale": [0, 4, 32, 53, 55, 71, 78, 96, 97, 118, 119, 125, 127, 132, 151], "3600": [0, 34, 36, 77], "time_label": 0, "time_label_fonts": 0, "time_label_kwarg": [0, 136], "new_plotitem": [0, 3, 47, 55, 82, 147], "plot_typ": [0, 24, 47, 55, 82, 84, 147], "return": [0, 1, 2, 3, 32, 35, 37, 40, 51, 55, 63, 67, 70, 71, 82, 84, 91, 92, 94, 97, 98, 101, 102, 103, 104, 106, 109, 116, 126, 140, 142, 148, 150, 152, 158, 160, 164, 167, 170], "clawplotitem": [0, 1, 7, 24, 29, 81, 83, 118, 124, 127, 136, 147], "associ": [0, 1, 2, 6, 24, 55, 62, 76, 94, 97, 98, 116], "kei": [0, 1, 2, 13, 30, 32, 47, 97, 104, 108, 109, 158, 164], "provid": [0, 2, 4, 7, 10, 16, 19, 22, 29, 30, 32, 34, 36, 37, 41, 44, 48, 49, 50, 51, 52, 55, 57, 58, 63, 65, 67, 72, 75, 77, 81, 86, 89, 91, 92, 97, 98, 99, 101, 103, 104, 108, 109, 110, 113, 114, 116, 118, 124, 132, 136, 138, 140, 148, 157, 158, 161, 162, 164, 167], "one": [0, 1, 2, 3, 4, 5, 6, 8, 13, 15, 16, 18, 19, 22, 24, 26, 27, 29, 30, 31, 32, 34, 36, 37, 38, 39, 42, 47, 49, 50, 55, 57, 58, 59, 60, 61, 62, 63, 64, 68, 70, 71, 72, 74, 75, 77, 78, 81, 82, 88, 94, 97, 98, 99, 101, 103, 104, 105, 108, 109, 111, 113, 115, 116, 118, 124, 125, 127, 132, 135, 139, 140, 141, 142, 144, 145, 147, 148, 149, 150, 151, 152, 153, 156, 157, 158, 162, 164, 167, 168], "item1": [0, 84], "etc": [0, 2, 16, 21, 22, 26, 29, 30, 34, 35, 36, 52, 55, 58, 61, 63, 67, 77, 81, 89, 140, 147, 148, 151, 158, 167], "gethandl": [0, 2, 3], "handl": [0, 2, 3, 6, 34, 42, 44, 48, 57, 63, 76, 78, 81, 94, 97, 101, 103, 104, 106, 107, 108, 109, 111, 118, 119, 120, 122, 123, 125, 127, 128, 129, 130, 141, 144, 158, 164], "plot": [1, 2, 4, 7, 8, 12, 29, 31, 32, 38, 39, 40, 42, 43, 44, 45, 48, 49, 57, 59, 60, 63, 70, 77, 87, 88, 90, 91, 94, 95, 96, 98, 103, 105, 107, 108, 110, 111, 113, 118, 122, 123, 124, 125, 126, 127, 129, 130, 131, 135, 136, 142, 148, 160, 164], "outdir": [1, 3, 35, 36, 37, 38, 39, 47, 54, 66, 81, 84, 91, 93, 94, 98, 124, 150, 152, 165], "path": [1, 5, 13, 14, 32, 34, 37, 41, 42, 44, 47, 49, 51, 55, 58, 61, 62, 64, 66, 70, 74, 81, 82, 91, 96, 97, 99, 103, 109, 126, 127, 130, 136, 146, 151, 158, 164, 165], "directori": [1, 3, 5, 6, 11, 12, 13, 14, 15, 16, 19, 21, 22, 24, 25, 27, 30, 31, 33, 34, 36, 37, 38, 39, 40, 43, 45, 46, 47, 48, 51, 54, 55, 58, 59, 61, 63, 67, 71, 76, 80, 81, 84, 91, 93, 94, 96, 97, 98, 101, 108, 111, 112, 113, 115, 116, 118, 119, 124, 125, 126, 127, 129, 139, 140, 144, 145, 146, 147, 148, 149, 153, 156, 157, 160, 161, 162, 165, 167, 168], "clawpack": [1, 2, 4, 5, 6, 7, 11, 16, 18, 19, 28, 30, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 44, 45, 47, 48, 49, 50, 51, 52, 54, 55, 62, 63, 64, 65, 67, 70, 71, 73, 74, 75, 76, 77, 80, 81, 82, 83, 84, 85, 86, 87, 88, 90, 91, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 106, 107, 108, 109, 110, 111, 114, 116, 117, 119, 120, 121, 122, 123, 124, 125, 139, 140, 142, 146, 148, 149, 150, 151, 153, 155, 158, 160, 162, 164, 165, 167, 168, 170], "output": [1, 5, 7, 8, 13, 14, 16, 27, 29, 30, 31, 32, 35, 37, 38, 39, 43, 44, 47, 48, 50, 51, 53, 54, 55, 59, 64, 72, 75, 81, 82, 84, 89, 91, 92, 93, 94, 95, 96, 99, 100, 102, 103, 104, 105, 106, 108, 109, 111, 118, 119, 123, 124, 125, 126, 127, 129, 130, 131, 135, 136, 137, 140, 147, 150, 152, 158, 159, 160, 161, 164, 167, 168], "plotdir": [1, 84, 147], "hardcopi": [1, 82, 84, 147], "file": [1, 5, 6, 7, 8, 9, 11, 12, 14, 15, 18, 19, 20, 21, 22, 24, 25, 27, 29, 30, 32, 35, 37, 38, 39, 41, 43, 44, 45, 47, 48, 49, 50, 52, 54, 56, 62, 63, 64, 66, 70, 75, 77, 78, 81, 83, 86, 89, 91, 93, 94, 96, 97, 98, 99, 100, 101, 103, 106, 107, 109, 111, 112, 113, 115, 118, 119, 120, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 141, 143, 144, 145, 146, 147, 148, 149, 150, 152, 155, 156, 157, 158, 159, 161, 164, 165, 166, 168], "put": [1, 11, 16, 30, 31, 44, 58, 62, 63, 71, 88, 93, 101, 125, 146], "overwrit": [1, 91, 98, 103], "ok": [1, 39, 40, 91, 99, 109, 120, 160, 164], "old": [1, 7, 22, 24, 34, 42, 58, 59, 84, 91, 99, 100, 101, 104, 116, 124, 126, 127, 132, 135, 137, 140, 151, 162], "afterfram": [1, 29, 81], "produc": [1, 3, 24, 29, 32, 37, 38, 39, 43, 47, 48, 55, 57, 58, 63, 71, 76, 80, 81, 97, 115, 116, 132, 147, 164], "frame": [1, 2, 3, 29, 36, 37, 47, 55, 71, 77, 81, 82, 84, 88, 91, 95, 97, 99, 103, 105, 109, 125, 135, 136, 139, 147, 150, 152, 153], "done": [1, 6, 7, 8, 11, 13, 16, 21, 22, 30, 36, 38, 39, 42, 47, 50, 55, 57, 58, 60, 63, 66, 70, 71, 75, 81, 82, 84, 88, 92, 93, 96, 109, 115, 120, 124, 125, 129, 139, 140, 142, 147, 149, 151, 161, 164, 165, 166], "beforefram": [1, 29, 127], "befor": [1, 3, 4, 6, 14, 19, 30, 32, 34, 36, 37, 38, 39, 42, 43, 44, 47, 57, 58, 59, 60, 62, 63, 66, 67, 71, 76, 77, 84, 88, 91, 97, 99, 104, 106, 111, 115, 116, 118, 119, 120, 131, 135, 136, 138, 140, 143, 144, 148, 149, 162, 164, 165], "start": [1, 2, 4, 5, 6, 7, 9, 13, 14, 19, 26, 29, 30, 32, 34, 36, 38, 39, 40, 41, 42, 43, 47, 48, 49, 51, 55, 57, 58, 59, 60, 61, 62, 63, 66, 70, 74, 75, 77, 82, 84, 88, 99, 103, 104, 110, 111, 115, 116, 124, 127, 132, 138, 139, 140, 142, 144, 151, 154, 158, 160, 162, 167], "printfig": 1, "png": [1, 13, 38, 39, 42, 43, 55, 63, 70, 71, 125, 130, 142], "make": [1, 5, 11, 13, 14, 19, 21, 22, 24, 26, 27, 29, 30, 34, 36, 38, 39, 41, 43, 44, 47, 50, 52, 54, 55, 58, 59, 62, 63, 64, 66, 67, 68, 71, 76, 78, 81, 84, 85, 88, 89, 91, 94, 95, 96, 97, 101, 103, 109, 114, 116, 118, 119, 123, 124, 125, 126, 127, 129, 130, 131, 132, 133, 135, 136, 140, 142, 148, 162, 164, 166, 167], "html": [1, 12, 13, 25, 30, 32, 38, 39, 43, 46, 47, 55, 58, 59, 75, 81, 82, 93, 97, 99, 100, 110, 111, 116, 118, 128, 130, 135, 136, 158], "latex": [1, 55, 81, 100], "exist": [1, 19, 23, 32, 33, 36, 38, 39, 55, 62, 66, 70, 71, 82, 94, 98, 101, 103, 106, 109, 120, 126, 127, 144, 158, 164, 166], "print_format": [1, 55], "print_frameno": [1, 55], "list": [1, 3, 4, 7, 8, 9, 11, 13, 17, 18, 19, 20, 24, 27, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 43, 47, 49, 55, 57, 58, 60, 61, 62, 63, 65, 66, 67, 68, 71, 72, 75, 76, 77, 82, 84, 86, 88, 91, 92, 94, 97, 98, 100, 101, 102, 103, 104, 106, 107, 109, 111, 115, 118, 123, 125, 127, 132, 135, 136, 137, 139, 142, 146, 148, 149, 150, 151, 152, 158, 159, 161, 164], "int": [1, 2, 3, 32, 34, 63, 91, 92, 94, 97, 98, 103, 106, 148, 149, 151, 158, 164], "print_figno": [1, 55, 118], "iplotclaw_figno": 1, "interact": [1, 13, 24, 38, 39, 43, 47, 50, 66, 78, 81, 82, 89, 99, 100, 104, 105, 108, 111, 124, 125, 142], "mode": [1, 13, 30, 109, 161], "displai": [1, 13, 38, 39, 43, 47, 55, 63, 82, 98, 116, 151], "latex_fnam": 1, "tex": 1, "latex_titl": 1, "go": [1, 5, 13, 16, 19, 24, 27, 30, 32, 38, 39, 58, 59, 60, 62, 67, 70, 71, 77, 84, 88, 91, 93, 96, 97, 102, 117, 124, 125, 132, 139, 143, 147, 153, 158, 162, 166, 170], "result": [1, 3, 4, 7, 9, 12, 17, 18, 19, 27, 28, 31, 32, 34, 35, 36, 38, 39, 40, 45, 46, 47, 48, 51, 52, 57, 58, 59, 62, 63, 66, 68, 71, 72, 75, 77, 81, 82, 83, 84, 87, 91, 93, 96, 98, 102, 105, 109, 115, 116, 118, 119, 123, 125, 126, 127, 128, 130, 132, 135, 136, 144, 148, 149, 150, 152, 160, 162, 164, 166], "latex_framesperpag": 1, "how": [1, 6, 7, 12, 16, 24, 26, 30, 31, 32, 34, 36, 38, 39, 41, 42, 44, 47, 50, 55, 59, 63, 64, 66, 70, 75, 76, 77, 81, 91, 93, 95, 96, 97, 101, 104, 108, 109, 111, 113, 114, 115, 116, 120, 125, 127, 129, 130, 135, 138, 139, 140, 147, 148, 151, 153, 162, 164, 168], "mani": [1, 3, 4, 6, 12, 13, 18, 19, 22, 23, 24, 30, 36, 38, 39, 40, 44, 45, 46, 49, 50, 55, 56, 58, 63, 64, 66, 67, 70, 75, 76, 77, 82, 84, 85, 86, 88, 93, 96, 101, 103, 108, 109, 115, 117, 118, 119, 125, 127, 128, 129, 130, 134, 137, 140, 142, 147, 148, 149, 151, 162, 167], "try": [1, 30, 31, 38, 39, 40, 47, 55, 57, 62, 63, 70, 82, 90, 93, 96, 97, 103, 105, 107, 108, 109, 111, 116, 148, 160, 164, 165], "page": [1, 4, 9, 11, 13, 15, 17, 19, 20, 24, 26, 30, 52, 57, 59, 60, 61, 62, 93, 96, 99, 100, 107, 110, 112, 116, 118, 126, 130, 135, 136, 137, 143, 145, 147, 153, 156, 157, 166, 167], "latex_framesperlin": 1, "latex_figsperlin": 1, "recal": [1, 12, 42, 149], "latex_pdf": 1, "run": [1, 5, 6, 7, 12, 13, 14, 16, 19, 22, 24, 26, 27, 30, 34, 35, 36, 37, 42, 43, 45, 46, 47, 48, 54, 55, 56, 58, 59, 60, 61, 62, 63, 64, 66, 68, 71, 77, 78, 81, 82, 84, 85, 87, 89, 91, 94, 95, 96, 98, 101, 105, 107, 108, 109, 111, 113, 115, 118, 119, 120, 124, 125, 126, 127, 128, 129, 131, 132, 134, 139, 140, 150, 151, 152, 158, 160, 161, 164, 167], "pdflatex": 1, "pdf": [1, 32], "index": [1, 6, 13, 24, 25, 29, 35, 37, 47, 58, 59, 82, 94, 96, 99, 101, 102, 109, 118, 127, 132, 136, 148, 149, 150, 151, 152], "call": [1, 6, 9, 22, 24, 29, 32, 36, 37, 41, 44, 47, 54, 55, 67, 70, 71, 75, 77, 82, 84, 88, 89, 91, 92, 97, 98, 101, 103, 104, 106, 108, 109, 115, 116, 118, 119, 123, 124, 126, 127, 136, 140, 142, 144, 146, 148, 150, 151, 152, 158, 164, 167], "_plotindex": [1, 47, 118], "These": [1, 4, 5, 12, 16, 18, 19, 20, 25, 30, 31, 32, 34, 36, 41, 45, 47, 52, 55, 58, 63, 64, 67, 70, 71, 78, 82, 84, 88, 93, 96, 97, 98, 100, 106, 108, 112, 114, 115, 116, 118, 119, 125, 126, 127, 128, 132, 135, 136, 137, 139, 149, 153, 158, 159, 162, 166, 170], "new_plotfigur": [1, 2, 47, 55, 82, 147], "figno": [1, 2, 47, 55, 82, 84, 118, 147], "getfram": [1, 3, 84], "frameno": [1, 3, 29, 37], "clawsolut": 1, "solut": [1, 3, 4, 5, 16, 18, 19, 24, 27, 29, 31, 36, 37, 39, 47, 49, 51, 64, 71, 75, 77, 81, 84, 89, 91, 94, 96, 97, 98, 101, 102, 104, 106, 107, 108, 115, 116, 123, 124, 128, 135, 139, 140, 147, 148, 149, 150, 152, 160, 167, 170], "read": [1, 4, 5, 7, 19, 30, 32, 34, 35, 37, 38, 39, 47, 48, 49, 52, 53, 57, 62, 63, 64, 67, 70, 71, 75, 77, 81, 89, 91, 97, 98, 103, 109, 124, 125, 127, 128, 133, 135, 136, 150, 151, 152, 158, 162, 164, 167, 168], "fort": [1, 8, 29, 34, 36, 47, 71, 81, 97, 103, 120, 124, 125, 126, 135, 139, 148, 149, 150, 152, 161, 168], "q000n": [1, 8], "n": [1, 6, 16, 17, 19, 32, 34, 47, 51, 68, 84, 99, 105, 116, 118, 127, 142, 148, 151, 167, 170], "find": [1, 3, 4, 6, 12, 19, 26, 29, 30, 31, 32, 51, 55, 62, 66, 75, 78, 81, 86, 93, 101, 106, 107, 109, 111, 113, 127, 158, 165], "onc": [1, 5, 13, 24, 30, 31, 38, 39, 55, 59, 60, 61, 62, 70, 71, 75, 77, 84, 88, 98, 99, 100, 101, 106, 109, 125, 127, 133], "framesoln_dict": 1, "It": [1, 4, 6, 12, 19, 22, 24, 30, 31, 34, 36, 47, 49, 52, 53, 55, 57, 58, 63, 67, 75, 81, 82, 88, 91, 94, 97, 98, 99, 104, 108, 111, 115, 116, 120, 125, 135, 139, 142, 143, 144, 148, 149, 151, 162, 164, 165, 166, 167], "q": [1, 3, 5, 6, 16, 19, 22, 24, 29, 36, 37, 47, 71, 77, 81, 84, 88, 89, 94, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 108, 115, 120, 123, 125, 141, 148, 149, 150, 152, 162, 167, 168, 170], "onli": [1, 3, 5, 6, 8, 12, 13, 16, 18, 19, 21, 24, 29, 30, 32, 34, 36, 37, 41, 42, 45, 46, 47, 49, 52, 55, 58, 59, 60, 62, 63, 64, 67, 68, 71, 72, 75, 76, 77, 78, 82, 88, 91, 94, 97, 98, 99, 101, 103, 104, 105, 106, 108, 109, 110, 113, 115, 118, 119, 124, 125, 126, 127, 130, 132, 135, 139, 140, 141, 142, 143, 144, 146, 147, 148, 149, 150, 151, 152, 154, 158, 162, 164, 165, 166, 167, 170], "separ": [1, 30, 34, 36, 46, 55, 58, 63, 67, 72, 96, 104, 109, 142, 164], "clearfram": [1, 84], "remov": [1, 3, 22, 31, 36, 43, 56, 58, 62, 63, 66, 84, 99, 111, 118, 119, 122, 123, 135, 137, 144, 151, 164, 165], "more": [1, 2, 3, 4, 5, 7, 10, 12, 13, 14, 16, 17, 18, 19, 22, 24, 26, 28, 30, 31, 32, 34, 36, 38, 41, 47, 48, 49, 50, 52, 55, 57, 58, 59, 61, 62, 63, 64, 65, 66, 70, 71, 72, 75, 81, 82, 83, 84, 85, 86, 89, 91, 92, 94, 96, 97, 98, 99, 100, 101, 102, 104, 105, 106, 108, 109, 111, 114, 115, 116, 118, 119, 120, 123, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 140, 142, 143, 144, 146, 147, 148, 149, 150, 151, 153, 154, 158, 160, 161, 162, 164, 165, 166, 167, 170], "yet": [1, 13, 18, 22, 27, 52, 56, 58, 61, 63, 81, 104, 118, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 140, 148, 150, 169], "clearfigur": 1, "clear": [1, 2, 6, 71, 84, 135], "paramet": [1, 6, 7, 9, 16, 18, 19, 22, 27, 29, 32, 34, 35, 36, 38, 39, 42, 43, 45, 48, 49, 50, 52, 55, 57, 66, 67, 68, 71, 75, 76, 77, 81, 87, 88, 91, 92, 97, 98, 100, 102, 103, 106, 109, 112, 115, 119, 125, 130, 132, 135, 137, 139, 140, 141, 143, 144, 150, 152, 154, 159, 162, 164, 165, 167], "first": [1, 3, 5, 13, 14, 19, 21, 22, 24, 30, 32, 34, 36, 37, 38, 39, 40, 41, 42, 55, 58, 59, 62, 63, 66, 70, 71, 82, 84, 88, 89, 94, 97, 98, 99, 101, 104, 105, 106, 108, 109, 111, 113, 115, 119, 123, 128, 136, 140, 141, 142, 144, 148, 150, 151, 158, 160, 162, 164, 170], "sure": [1, 19, 22, 30, 43, 58, 59, 60, 61, 62, 71, 78, 88, 97, 99, 101, 103, 107, 109, 143, 164, 165, 166], "previou": [1, 30, 31, 47, 57, 59, 61, 62, 67, 70, 71, 84, 88, 104, 113, 119, 124, 125, 126, 127, 132, 139, 144, 148, 149, 150, 152, 162, 164], "chang": [1, 6, 8, 13, 15, 16, 18, 19, 21, 22, 27, 30, 31, 32, 34, 36, 43, 44, 49, 54, 55, 56, 57, 58, 59, 62, 63, 66, 67, 68, 70, 71, 76, 77, 78, 81, 84, 88, 89, 95, 97, 98, 106, 109, 110, 113, 114, 115, 116, 138, 140, 144, 145, 148, 149, 150, 151, 152, 154, 156, 157, 162, 165, 167], "re": [1, 17, 30, 43, 47, 66, 71, 78, 82, 84, 88, 105, 115, 116, 129, 165], "session": [1, 38, 39, 40, 100, 105], "iplotclaw": [1, 13, 24, 38, 39, 47, 50, 81, 82, 100, 111], "being": [1, 3, 4, 8, 13, 18, 19, 34, 42, 47, 49, 52, 57, 62, 70, 72, 84, 91, 97, 102, 103, 104, 109, 111, 113, 115, 118, 124, 126, 128, 137, 140, 142, 144, 148, 151, 165, 167], "getfigur": 1, "fignam": [1, 84], "getax": 1, "axesnam": [1, 84], "clawplotax": [1, 2, 3, 29, 82, 127, 132, 136, 147], "search": [1, 13, 14, 17, 62, 81, 96, 109, 111, 125, 127, 142, 146], "over": [1, 3, 5, 6, 13, 16, 17, 24, 30, 32, 34, 36, 41, 42, 47, 48, 49, 50, 52, 55, 57, 63, 64, 70, 71, 72, 75, 81, 97, 98, 104, 115, 118, 119, 120, 128, 130, 140, 142, 144, 147, 149, 150, 151, 161, 162, 167, 170], "found": [1, 4, 5, 6, 11, 12, 13, 16, 19, 24, 26, 29, 31, 34, 37, 38, 39, 43, 45, 47, 49, 51, 52, 54, 58, 63, 66, 67, 72, 80, 82, 83, 84, 88, 92, 99, 103, 107, 109, 111, 113, 116, 124, 127, 139, 143, 147, 154, 158, 164, 165], "uniqu": [1, 77, 118, 124, 158], "getitem": 1, "itemnam": [1, 84], "showitem": 1, "plotfram": 1, "number": [1, 2, 3, 4, 6, 8, 12, 16, 17, 19, 21, 24, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 46, 47, 49, 55, 58, 63, 66, 71, 76, 77, 78, 84, 88, 89, 91, 92, 93, 94, 96, 97, 98, 99, 101, 103, 104, 106, 108, 109, 110, 113, 115, 116, 118, 119, 120, 122, 123, 124, 125, 126, 127, 129, 136, 139, 140, 142, 148, 149, 150, 151, 152, 158, 159, 160, 164, 167], "conveni": [1, 29, 34, 36, 38, 39, 42, 47, 55, 84, 91, 93, 96, 98, 100, 108, 167, 170], "pyclaw": [1, 3, 4, 12, 17, 25, 26, 29, 30, 31, 46, 47, 59, 60, 61, 77, 78, 84, 85, 95, 99, 101, 107, 111, 138, 140, 141, 146], "plotter": [1, 3, 29, 84], "frametool": [1, 29, 84, 118, 130], "printfram": [1, 81], "still": [1, 5, 7, 8, 13, 16, 18, 19, 24, 26, 28, 34, 42, 45, 47, 49, 55, 56, 67, 70, 71, 77, 81, 86, 97, 104, 110, 115, 116, 118, 123, 124, 125, 126, 127, 128, 130, 135, 137, 139, 140, 151, 158], "clawplotdata": [2, 3, 29, 47, 55, 82, 84, 91, 147], "next": [2, 3, 6, 13, 20, 36, 38, 40, 47, 58, 71, 77, 82, 84, 87, 88, 96, 97, 99, 104, 108, 113, 115, 116, 118, 135, 136, 137, 148, 149, 151], "unus": [2, 97], "1001": 2, "figsiz": [2, 42, 70, 82, 136, 142, 147], "tupl": [2, 3, 32, 51, 63, 75, 82, 94, 97, 98, 164], "size": [2, 22, 32, 36, 37, 42, 47, 55, 63, 76, 77, 81, 94, 97, 99, 104, 125, 130, 135, 149, 150, 152, 154, 162, 164], "facecolor": [2, 82, 118, 136, 147], "background": [2, 81, 127, 147], "behind": [2, 42, 70, 144, 151], "By": [2, 15, 32, 44, 49, 51, 55, 57, 63, 75, 82, 84, 88, 94, 98, 100, 107, 127, 142, 145, 156, 157, 164, 170], "theme": 2, "tan": [2, 82], "public": [2, 4, 13, 17, 23, 138], "probabl": [2, 13, 30, 55, 68, 70, 110, 111], "w": [2, 17, 51, 140, 170], "white": [2, 63, 118], "keyword": [2, 3, 82, 88, 93, 94, 97, 103, 109, 116, 127, 147, 158, 164], "12": [2, 34, 42, 55, 70, 82, 142, 147], "5": [2, 4, 5, 8, 9, 11, 13, 18, 19, 21, 27, 32, 34, 35, 36, 37, 41, 42, 45, 47, 49, 51, 55, 56, 57, 58, 59, 63, 64, 66, 67, 68, 70, 75, 82, 92, 94, 98, 99, 101, 102, 104, 110, 111, 115, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 148, 149, 150, 151, 152, 158, 161, 162, 164, 169], "would": [2, 3, 12, 13, 16, 26, 29, 30, 34, 36, 41, 44, 55, 57, 59, 62, 64, 66, 67, 70, 72, 75, 77, 82, 86, 88, 91, 94, 98, 109, 116, 125, 142, 143, 144, 147, 148, 151, 158, 162, 167], "inch": [2, 55, 63, 82, 147], "red": [2, 3, 30, 47, 63, 82, 116, 147], "option": [2, 12, 13, 16, 19, 22, 24, 27, 30, 31, 32, 34, 36, 37, 38, 39, 43, 44, 51, 54, 57, 60, 62, 66, 71, 77, 81, 82, 88, 89, 91, 93, 94, 95, 97, 98, 100, 103, 104, 105, 108, 109, 111, 112, 115, 116, 118, 120, 123, 124, 125, 128, 130, 133, 135, 137, 142, 146, 147, 148, 150, 151, 152, 153, 158, 164], "clf_each_fram": 2, "clf": 2, "axes1": [2, 84], "shown": [3, 13, 18, 19, 58, 63, 67, 68, 71, 78, 98, 118, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 142, 164, 167], "fragment": 3, "typic": [3, 22, 42, 66, 67, 71, 72, 75, 77, 78, 84, 89, 99, 101, 104, 106, 115, 149, 150, 161, 162, 165, 166, 167, 170], "assum": [3, 5, 22, 24, 32, 34, 36, 37, 39, 42, 49, 51, 52, 55, 57, 58, 59, 63, 71, 75, 81, 97, 98, 100, 101, 102, 108, 109, 115, 123, 136, 142, 143, 148, 151, 158, 159, 162, 164, 166, 170], "instanc": [3, 30, 37, 55, 75, 78, 84, 88, 89, 91, 94, 97, 98, 101, 142, 151], "type": [3, 4, 7, 13, 17, 18, 22, 30, 32, 38, 39, 43, 47, 48, 55, 66, 71, 82, 83, 84, 88, 89, 90, 92, 94, 97, 99, 100, 104, 105, 108, 109, 142, 149, 150, 151, 158, 159, 162, 164, 170], "dimension": [3, 7, 8, 17, 19, 24, 27, 32, 34, 36, 38, 39, 47, 49, 52, 56, 71, 94, 101, 123, 124, 126, 129, 150, 151, 152, 164, 167], "point": [3, 5, 6, 13, 15, 16, 17, 22, 30, 32, 35, 36, 38, 39, 41, 42, 44, 47, 48, 49, 50, 51, 52, 55, 57, 58, 59, 61, 62, 63, 64, 71, 72, 75, 88, 98, 99, 103, 109, 110, 111, 115, 118, 126, 128, 130, 136, 139, 140, 142, 143, 144, 145, 146, 148, 149, 150, 151, 156, 157, 158, 162, 164, 165, 167], "slice": [3, 49, 71, 140], "scatter": [3, 24, 71], "radial": [3, 18, 34, 49, 51, 151, 167], "symmetr": [3, 49, 51, 167], "between": [3, 4, 5, 6, 13, 16, 25, 27, 30, 32, 33, 34, 36, 37, 41, 51, 55, 59, 63, 70, 71, 72, 75, 76, 78, 81, 91, 94, 98, 104, 106, 107, 109, 110, 111, 115, 118, 124, 125, 140, 142, 143, 148, 149, 150, 151, 152, 153, 154, 161, 162, 164, 166, 167], "plot_var": [3, 29, 47, 55, 82, 83], "fill_var2": 3, "diment": 3, "raster": [3, 55, 57, 135, 162], "contour": [3, 32, 47, 55, 57, 71, 110, 147, 164], "pcolor": [3, 47, 81, 110, 118, 135, 164], "2d_schlieren": 3, "schlieren": [3, 71], "2d_patch": [3, 24], "cell": [3, 4, 5, 7, 8, 15, 16, 18, 19, 22, 24, 27, 29, 34, 35, 36, 37, 47, 48, 49, 55, 57, 63, 70, 71, 72, 76, 77, 78, 88, 94, 97, 99, 102, 104, 106, 108, 115, 119, 120, 124, 125, 126, 127, 128, 129, 130, 132, 136, 140, 143, 144, 145, 148, 149, 150, 152, 154, 159, 161, 162, 167, 170], "patch": [3, 6, 7, 16, 19, 24, 29, 34, 42, 55, 71, 75, 76, 77, 81, 82, 97, 99, 103, 106, 115, 125, 127, 130, 132, 144, 147, 149, 161, 162, 167], "edg": [3, 6, 15, 16, 19, 29, 32, 34, 35, 36, 37, 41, 49, 63, 75, 94, 102, 140, 142, 145, 149, 150, 152, 167], "hillshad": [3, 118], "come": [3, 30, 82, 84, 93, 99, 104, 123, 162, 167], "parent": [3, 29, 94, 106, 109], "integ": [3, 34, 35, 36, 47, 55, 63, 68, 70, 82, 89, 97, 103, 115, 118, 126, 129, 140, 148, 151, 158, 164], "compon": [3, 16, 19, 22, 24, 27, 39, 47, 61, 62, 71, 77, 81, 101, 103, 105, 106, 115, 123, 132, 141, 148, 149, 150, 162, 167], "correspond": [3, 6, 12, 25, 27, 29, 32, 35, 36, 37, 47, 49, 51, 52, 57, 58, 59, 63, 71, 75, 82, 88, 92, 94, 97, 98, 101, 103, 106, 115, 116, 140, 142, 143, 148, 149, 150, 151, 152, 158, 162, 166, 167], "appli": [3, 4, 5, 6, 13, 16, 17, 19, 27, 32, 52, 55, 57, 68, 70, 75, 82, 84, 92, 94, 97, 104, 115, 139, 148, 151, 167], "comput": [3, 4, 5, 6, 13, 16, 17, 18, 19, 29, 31, 32, 34, 35, 36, 37, 42, 47, 49, 51, 55, 57, 62, 63, 64, 66, 72, 75, 81, 82, 84, 89, 91, 94, 96, 97, 98, 99, 104, 108, 111, 113, 115, 118, 119, 120, 124, 125, 129, 132, 135, 137, 140, 144, 148, 150, 151, 152, 159, 162, 167, 170], "signatur": [3, 89, 92, 94, 95, 97, 102, 158], "hold": [3, 37, 84, 108, 115], "current": [3, 5, 13, 14, 19, 22, 24, 26, 29, 30, 31, 32, 34, 37, 41, 42, 44, 47, 48, 49, 52, 57, 58, 59, 61, 62, 63, 64, 71, 73, 77, 82, 84, 94, 97, 98, 99, 104, 106, 109, 111, 115, 116, 118, 124, 126, 127, 137, 139, 143, 147, 148, 149, 150, 151, 152, 154, 158, 159, 162, 164, 166], "afteritem": [3, 29], "afterpatch": [3, 29], "There": [3, 6, 13, 24, 36, 39, 43, 55, 58, 59, 66, 70, 75, 77, 84, 85, 98, 105, 113, 126, 127, 147, 148, 154, 159, 160, 167, 169], "calcul": [3, 5, 6, 18, 19, 29, 32, 35, 37, 48, 51, 71, 75, 82, 94, 102, 104, 118, 120, 125, 164], "cd": [3, 13, 30, 38, 39, 40, 56, 58, 59, 61, 62, 84, 93, 96, 99, 105, 116, 160], "On": [3, 5, 13, 55, 76, 85, 126, 136, 142, 146, 167], "ylower": [3, 24, 29, 42, 89, 127, 150, 162, 164], "patchno": [3, 29], "out": [3, 16, 17, 26, 28, 31, 32, 34, 36, 37, 38, 39, 42, 47, 48, 49, 54, 56, 57, 58, 59, 62, 63, 64, 65, 66, 71, 75, 82, 85, 86, 88, 89, 91, 97, 98, 99, 100, 103, 108, 110, 111, 113, 116, 125, 127, 129, 130, 140, 142, 149, 150, 152, 158, 164, 165], "lower": [3, 24, 32, 34, 35, 41, 49, 57, 70, 77, 94, 99, 142, 144, 148, 150, 152, 162, 164, 166], "left": [3, 5, 10, 13, 16, 20, 27, 29, 32, 34, 57, 77, 84, 94, 101, 102, 108, 118, 126, 132, 135, 136, 137, 138, 139, 140, 143, 149, 162, 164, 166, 170], "mappedgrid": [3, 71], "map": [3, 16, 18, 31, 32, 42, 48, 63, 70, 71, 82, 86, 89, 94, 96, 101, 115, 123, 127, 132, 141, 164, 170], "mapc2p": [3, 27, 29, 49, 71, 89, 94, 132], "underli": [3, 55, 125], "requir": [3, 4, 16, 18, 19, 22, 24, 27, 29, 30, 32, 34, 36, 37, 38, 39, 43, 48, 49, 51, 52, 59, 62, 70, 71, 75, 78, 81, 84, 85, 88, 89, 94, 97, 100, 101, 104, 105, 106, 108, 109, 110, 115, 116, 118, 119, 120, 123, 125, 128, 130, 132, 135, 137, 140, 141, 142, 147, 148, 149, 150, 151, 152, 158, 159, 162, 165, 168, 170], "depend": [3, 13, 16, 30, 31, 32, 34, 37, 38, 39, 43, 44, 50, 52, 55, 66, 68, 71, 75, 82, 87, 97, 102, 103, 104, 109, 111, 115, 127, 144, 149, 151, 164, 165, 167, 170], "summar": [3, 30, 33, 115, 117, 167], "plotstyl": [3, 47, 82, 147], "anyth": [3, 6, 30, 31, 62, 67, 116, 127], "valid": [3, 52, 75, 91, 98, 103, 106, 125, 151, 158, 159, 164], "fmt": 3, "group": [3, 13, 26, 30, 32, 52, 93, 97, 99, 107, 124, 140], "solid": [3, 16, 55, 75, 101, 147, 148, 150, 152], "dash": [3, 99], "o": [3, 5, 17, 41, 42, 43, 70, 72, 82, 85, 86, 89, 97, 98, 107, 127, 150, 164, 167], "circl": [3, 51, 82, 118], "bo": 3, "blue": [3, 11, 42, 47, 63, 70, 82, 142, 164], "though": [3, 42, 78, 158, 162], "also": [3, 4, 5, 6, 7, 8, 9, 11, 12, 16, 17, 18, 19, 20, 22, 24, 25, 26, 27, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 44, 45, 46, 47, 48, 49, 51, 52, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 66, 67, 70, 71, 75, 76, 77, 78, 81, 82, 84, 88, 90, 91, 94, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 118, 119, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 146, 148, 149, 150, 151, 152, 153, 156, 157, 158, 159, 160, 161, 162, 164, 165, 166, 167, 169, 170], "overrul": 3, "r": [3, 4, 6, 17, 30, 47, 51, 56, 58, 70, 71, 74, 82, 88, 92, 99, 101, 118, 140, 142, 147, 164, 170], "ff0000": [3, 63], "No": [3, 43, 55, 59, 71, 94, 104, 133, 140, 148, 151, 165], "extra": [3, 55, 141], "give": [3, 6, 9, 10, 13, 16, 17, 18, 19, 26, 30, 32, 34, 35, 36, 38, 39, 47, 49, 56, 63, 64, 70, 72, 75, 76, 77, 82, 84, 99, 100, 104, 116, 120, 124, 125, 129, 132, 142, 148, 151, 162, 164, 166], "polygon": [3, 7, 41, 55, 63, 130, 164], "curv": [3, 47, 81, 142], "fill_between": 3, "plot_var2": 3, "zero": [3, 16, 32, 34, 42, 44, 47, 63, 71, 72, 88, 101, 102, 106, 108, 132, 142, 143], "fill_wher": 3, "plotitem": [3, 29, 47, 82, 147], "mean": [3, 13, 24, 30, 34, 42, 47, 52, 56, 62, 71, 72, 98, 99, 115, 118, 140, 143, 148, 150, 152, 166], "map_2d_to_1d": 3, "In": [3, 5, 6, 8, 11, 12, 15, 16, 18, 19, 21, 22, 24, 29, 32, 34, 36, 41, 44, 47, 48, 49, 52, 55, 56, 57, 58, 59, 62, 63, 64, 66, 67, 70, 71, 72, 74, 75, 77, 78, 82, 83, 84, 88, 89, 94, 96, 97, 98, 99, 100, 101, 102, 104, 106, 109, 111, 112, 113, 115, 118, 119, 120, 123, 124, 125, 127, 128, 132, 136, 139, 140, 142, 144, 145, 146, 148, 149, 151, 156, 157, 162, 164, 165, 167, 170], "about": [3, 5, 7, 13, 14, 16, 18, 19, 24, 27, 35, 36, 37, 38, 39, 43, 49, 51, 52, 57, 59, 63, 66, 68, 71, 77, 83, 85, 88, 96, 97, 99, 104, 111, 116, 124, 128, 130, 135, 136, 140, 147, 149, 150, 151, 162, 165, 167, 170], "j": [3, 4, 5, 15, 17, 22, 24, 29, 35, 42, 56, 63, 70, 71, 77, 84, 96, 97, 115, 119, 120, 144, 145], "v": [3, 16, 27, 31, 32, 34, 36, 37, 51, 64, 67, 116, 124, 149, 162], "radiu": [3, 151, 158, 159, 164], "q0_vs_radiu": 3, "convert": [3, 24, 27, 32, 35, 37, 45, 51, 55, 62, 63, 66, 75, 78, 89, 96, 101, 109, 110, 127, 130, 136, 137, 148, 149, 158, 162, 166], "numpi": [3, 13, 32, 34, 36, 37, 42, 51, 70, 85, 87, 88, 89, 91, 94, 101, 106, 107, 108, 110, 116, 137, 141, 142, 150, 164, 165], "sqrt": [3, 34, 37, 49, 68, 88, 101, 102, 108, 150], "q0": [3, 101], "work": [3, 5, 8, 13, 16, 19, 21, 22, 24, 26, 27, 28, 30, 31, 34, 36, 38, 39, 43, 48, 52, 55, 56, 57, 58, 59, 60, 61, 62, 63, 70, 71, 74, 75, 76, 82, 85, 86, 87, 88, 90, 91, 92, 96, 97, 98, 99, 102, 104, 105, 110, 111, 113, 114, 115, 116, 118, 121, 122, 123, 124, 125, 126, 127, 130, 132, 133, 138, 140, 146, 147, 148, 149, 153, 159, 162, 165, 169], "symbol": [3, 71, 111], "best": [3, 4, 16, 24, 28, 30, 36, 44, 49, 55, 57, 59, 60, 66, 72, 74, 76, 81, 82, 97, 101, 113, 114, 115, 116, 127, 138, 140, 151, 155, 158, 162, 167], "descript": [3, 4, 6, 9, 24, 25, 27, 32, 36, 37, 63, 71, 75, 78, 81, 96, 97, 109, 113, 115, 137, 140, 141, 151, 158, 162, 170], "celledges_show": [3, 24], "draw": 3, "amr_celledges_show": 3, "level": [3, 6, 7, 16, 19, 25, 29, 31, 34, 36, 41, 42, 47, 48, 50, 51, 52, 55, 58, 59, 61, 62, 71, 72, 76, 77, 89, 91, 94, 96, 97, 98, 104, 111, 112, 115, 116, 119, 120, 124, 125, 127, 130, 139, 142, 143, 146, 148, 149, 150, 152, 161, 162, 164, 166, 167], "patchedges_show": [3, 24], "mostli": [3, 81, 96, 130, 137], "contour_level": [3, 164], "three": [3, 13, 17, 24, 32, 34, 37, 52, 55, 67, 71, 75, 99, 103, 109, 116, 142, 148, 151, 162, 164, 167], "contour_nlevel": 3, "contour_min": 3, "minimum": [3, 19, 34, 47, 55, 75, 108, 125, 151, 164], "contour_max": 3, "maximum": [3, 24, 32, 34, 35, 36, 48, 71, 72, 104, 108, 115, 119, 120, 127, 130, 148, 149, 150, 152, 158, 159], "contour_color": 3, "specif": [3, 5, 12, 19, 24, 30, 32, 47, 48, 49, 51, 55, 56, 62, 65, 67, 68, 77, 86, 87, 89, 91, 96, 97, 98, 102, 103, 109, 113, 125, 126, 127, 130, 147, 148, 149, 150, 152, 159, 162], "b": [3, 5, 17, 30, 32, 34, 35, 36, 37, 42, 47, 49, 56, 58, 59, 68, 72, 82, 104, 115, 123, 130, 142, 143, 144, 151, 164, 166], "0000ff": [3, 63], "colormap": [3, 32, 42, 50, 55, 70, 71, 81, 83, 124, 130, 164], "amr_contour_color": 3, "As": [3, 18, 19, 39, 42, 48, 49, 52, 58, 59, 63, 64, 88, 108, 110, 114, 118, 119, 130, 140, 141, 144, 151, 154, 160, 167], "black": [3, 47], "subsequ": [3, 10, 71], "both": [3, 16, 18, 19, 30, 32, 35, 36, 37, 38, 39, 41, 42, 47, 52, 57, 60, 62, 67, 70, 71, 75, 77, 89, 97, 98, 99, 104, 105, 115, 116, 123, 124, 127, 130, 135, 140, 141, 142, 144, 148, 149, 150, 152, 156, 162, 167], "fine": [3, 19, 34, 35, 36, 42, 49, 58, 74, 78, 96, 101, 115, 118, 125, 132, 142, 144, 148, 149, 151, 162, 167], "coars": [3, 34, 36, 55, 115, 118, 125, 132, 148, 162, 167], "anoth": [3, 19, 24, 34, 36, 42, 47, 51, 55, 62, 63, 77, 81, 85, 93, 104, 107, 116, 127, 158, 167], "refin": [3, 4, 5, 7, 8, 17, 19, 24, 36, 48, 49, 52, 55, 56, 57, 70, 71, 77, 78, 88, 125, 127, 128, 130, 132, 142, 144, 147, 148, 149, 150, 161, 162, 167], "region": [3, 6, 7, 13, 16, 19, 24, 34, 36, 41, 42, 48, 52, 53, 55, 63, 68, 72, 75, 78, 113, 118, 127, 130, 132, 143, 144, 149, 150, 154, 162, 164], "lack": 3, "hidden": [3, 66, 82], "blank": [3, 35, 63, 158], "coarser": [3, 16, 19, 57, 125, 144, 148, 149, 167], "easili": [3, 13, 30, 34, 55, 58, 71, 82, 89, 94, 105, 109, 116, 118, 130, 153], "contour_show": 3, "commonli": [3, 19, 71, 82, 84], "amr_contour_show": 3, "determin": [3, 5, 6, 32, 34, 37, 42, 47, 48, 49, 52, 54, 55, 58, 63, 72, 75, 82, 92, 94, 97, 102, 106, 111, 115, 120, 124, 125, 139, 142, 143, 147, 148, 149, 151, 164, 167], "whether": [3, 6, 13, 16, 24, 51, 57, 60, 62, 64, 65, 66, 71, 86, 94, 97, 98, 102, 103, 104, 115, 116, 125, 140, 142, 148, 149, 151, 164], "view": [3, 4, 24, 36, 38, 39, 47, 48, 49, 51, 55, 57, 58, 63, 77, 81, 83, 84, 88, 99, 105, 110, 123, 127, 153, 155], "finest": [3, 19, 34, 36, 42, 47, 72, 127, 161, 164], "contour_kwarg": [3, 164], "pcolor_cmap": [3, 55], "pcolor_cmin": 3, "pcolor_cmax": 3, "thei": [3, 5, 6, 13, 16, 18, 19, 26, 29, 30, 32, 34, 36, 41, 42, 45, 47, 49, 52, 55, 58, 59, 62, 63, 64, 67, 70, 71, 77, 81, 94, 96, 101, 104, 109, 115, 116, 125, 132, 144, 147, 151, 154, 158, 162, 164, 167], "chosen": [3, 31, 34, 41, 42, 49, 55, 57, 70, 108, 115, 132, 143, 149], "vari": [3, 15, 17, 27, 32, 42, 48, 49, 57, 68, 72, 101, 103, 123, 130, 140, 141, 143, 145, 149, 151, 170], "yield": [3, 18, 19], "veri": [3, 5, 16, 17, 18, 19, 24, 49, 52, 55, 59, 60, 63, 75, 82, 86, 89, 97, 98, 99, 100, 101, 104, 116, 118, 120, 124, 135, 142, 144, 148, 159, 162], "confus": [3, 57, 62, 111, 132, 140], "add_colorbar": [3, 32, 164], "ad": [3, 12, 16, 22, 24, 26, 27, 29, 31, 34, 36, 37, 44, 47, 51, 57, 58, 59, 62, 63, 64, 68, 71, 72, 75, 82, 87, 89, 92, 94, 95, 98, 99, 111, 112, 113, 115, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 133, 135, 136, 137, 139, 144, 148, 149, 151, 154, 158, 161, 164, 168], "imshow_cmap": 3, "imshow_cmin": 3, "imshow_cmax": 3, "hillshade_vertical_exagger": 3, "vertic": [3, 32, 41, 52, 55, 63, 70, 142, 143, 151, 164, 166], "exagger": 3, "calul": 3, "hillshade_azimuth_degre": 3, "light": [3, 55, 71, 115], "sourc": [3, 4, 17, 18, 19, 25, 27, 30, 32, 44, 48, 49, 55, 56, 58, 59, 61, 62, 63, 65, 67, 68, 81, 86, 89, 93, 94, 95, 104, 105, 107, 108, 109, 113, 114, 116, 118, 125, 126, 127, 136, 137, 141, 143, 148, 150, 151, 152, 155, 156, 157, 158, 162], "azimuth": 3, "angl": [3, 16, 32, 51, 75], "315": 3, "northwest": 3, "360": [3, 51, 55, 75], "degre": [3, 32, 49, 51, 55, 63, 72, 75], "clockwis": [3, 34, 51, 75, 164], "north": [3, 34, 42, 49, 51, 70, 75], "recommend": [3, 4, 18, 19, 32, 34, 36, 38, 39, 58, 59, 60, 62, 76, 81, 90, 94, 96, 97, 99, 100, 104, 105, 107, 108, 115, 127, 135, 137, 148, 150, 152, 168], "proper": [3, 6, 15, 42, 47, 56, 57, 58, 59, 63, 68, 70, 71, 97, 109, 119, 125, 145, 149, 150, 156, 157, 158, 167], "interpret": [3, 32, 57, 75, 97, 127, 162], "peopl": [3, 4, 12, 13, 86], "hillshade_altitude_degre": 3, "altitud": 3, "horizon": 3, "45": [3, 104], "90": [3, 27, 32, 49, 55, 67, 75, 105, 107, 136], "hillshade_latlon": 3, "correct": [3, 18, 19, 22, 30, 44, 58, 59, 67, 68, 71, 82, 88, 94, 97, 99, 103, 109, 119, 120, 124, 144, 148, 150, 151, 152], "unit": [3, 32, 49, 50, 51, 56, 75, 94, 125, 136, 158], "z": [3, 42, 57, 63, 70, 71, 88, 94, 102, 108, 142, 148, 149, 162, 164], "111200": 3, "reflect": [3, 4, 5, 16, 30, 115, 127, 148, 150, 152], "relat": [3, 7, 19, 24, 26, 58, 78, 102, 113, 126, 130, 132, 143], "pre": [3, 13, 35, 59, 90, 97], "pend": 3, "amr_": [3, 7], "whose": [3, 49, 82, 89, 101, 102, 144, 148, 149, 164], "origin": [3, 6, 13, 16, 18, 19, 22, 30, 32, 36, 37, 45, 47, 56, 58, 63, 70, 76, 77, 89, 104, 109, 119, 125, 132, 139, 149, 150, 151, 152, 164], "hand": [3, 5, 19, 20, 21, 22, 68, 88, 116, 118, 135, 136, 137, 142], "higher": [3, 6, 18, 19, 55, 94, 104, 105, 115, 130, 140, 142, 143, 144], "shorter": [3, 115, 164], "last": [3, 20, 29, 34, 36, 59, 61, 82, 88, 89, 101, 108, 118, 124, 135, 136, 137, 148, 158], "repeatedli": [3, 99, 105, 149], "finer": [3, 7, 19, 34, 55, 115, 119, 120, 142, 148, 149], "celledg": [3, 32, 49], "colorbar_shrink": [3, 32], "colorbar_label": 3, "colorbar_tick": 3, "colorbar_tick_label": 3, "colorbar_extend": [3, 136], "colorbar_kwarg": [3, 127], "stand": [4, 132], "conserv": [4, 5, 6, 17, 18, 19, 98, 104, 106, 128, 141, 167, 170], "law": [4, 17, 63, 151, 170], "packag": [4, 27, 30, 31, 38, 39, 55, 59, 60, 67, 77, 78, 81, 85, 86, 88, 94, 96, 98, 100, 101, 103, 105, 108, 110, 111, 118, 129, 130, 165, 168], "wa": [4, 5, 6, 14, 19, 21, 22, 27, 31, 32, 34, 35, 36, 37, 42, 49, 52, 54, 58, 59, 66, 68, 70, 71, 75, 82, 99, 103, 104, 106, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 139, 142, 144, 161, 162, 164], "initi": [4, 5, 7, 12, 13, 18, 19, 24, 27, 32, 36, 37, 47, 48, 49, 51, 52, 55, 59, 64, 67, 71, 72, 75, 77, 78, 84, 86, 87, 88, 89, 91, 92, 94, 95, 97, 98, 102, 103, 104, 106, 107, 109, 112, 115, 124, 127, 130, 132, 140, 143, 148, 149, 150, 152, 154, 158, 162, 164], "develop": [4, 6, 7, 12, 13, 19, 20, 24, 25, 45, 52, 56, 58, 61, 62, 65, 70, 71, 81, 85, 86, 89, 96, 101, 104, 105, 111, 113, 116, 118, 127, 128, 130, 132, 135, 136, 137, 140, 143, 144, 150], "linear": [4, 5, 17, 18, 19, 32, 36, 37, 47, 49, 55, 72, 75, 82, 88, 92, 104, 118, 128, 140, 141, 142], "nonlinear": [4, 5, 17, 52, 92, 140, 148, 170], "hyperbol": [4, 5, 6, 17, 18, 19, 45, 78, 89, 96, 101, 102, 108, 140, 148, 151, 167, 170], "system": [4, 16, 17, 18, 19, 25, 39, 40, 48, 55, 56, 62, 63, 67, 76, 77, 86, 96, 97, 98, 99, 101, 102, 105, 108, 111, 116, 118, 140, 148, 150, 152, 160, 167, 170], "focu": [4, 48], "high": [4, 17, 34, 52, 55, 70, 72, 75, 78, 89, 96, 104, 140, 143, 144, 166, 167], "resolut": [4, 6, 17, 32, 34, 36, 42, 47, 64, 72, 75, 94, 104, 108, 109, 119, 123, 127, 128, 135, 140, 143, 162, 164, 166, 167], "godunov": [4, 94, 104, 148, 150, 152, 167], "method": [4, 5, 7, 17, 19, 34, 36, 37, 41, 45, 47, 57, 70, 72, 82, 84, 88, 91, 92, 94, 99, 103, 104, 109, 115, 116, 123, 140, 147, 148, 149, 150, 152, 158, 161, 162, 164, 167], "framework": [4, 86, 89, 124, 125], "applic": [4, 6, 15, 16, 18, 19, 21, 22, 24, 25, 26, 30, 31, 36, 37, 38, 39, 40, 44, 45, 46, 47, 48, 50, 59, 61, 62, 67, 70, 76, 77, 84, 93, 94, 95, 96, 98, 104, 109, 112, 114, 115, 116, 118, 119, 122, 123, 125, 126, 127, 129, 130, 140, 142, 144, 145, 148, 151, 156, 157, 162, 164, 165, 167, 168], "finit": [4, 17, 34, 36, 45, 49, 57, 63, 70, 71, 72, 75, 104, 130, 142, 151, 161, 162, 167], "volum": [4, 17, 31, 34, 36, 45, 49, 57, 63, 70, 71, 72, 96, 130, 142, 149, 151, 161, 162, 167], "riemann": [4, 5, 8, 22, 24, 25, 30, 31, 48, 59, 62, 67, 78, 86, 88, 94, 95, 104, 105, 106, 108, 111, 146, 148, 150, 152, 156, 157, 170], "solver": [4, 5, 6, 22, 24, 25, 27, 30, 48, 49, 60, 61, 62, 67, 85, 86, 87, 91, 94, 95, 98, 106, 118, 121, 123, 125, 126, 127, 128, 129, 130, 132, 137, 148, 150, 152, 156, 157, 170], "resolv": [4, 34, 36, 55, 58, 62, 113, 127, 144], "jump": [4, 5, 71, 84, 94, 104, 125, 148, 170], "discontinu": [4, 104, 170], "interfac": [4, 21, 24, 71, 86, 89, 92, 96, 97, 102, 104, 109, 140, 167, 168, 170], "wave": [4, 5, 6, 16, 17, 18, 27, 34, 42, 48, 49, 52, 55, 56, 75, 92, 94, 96, 101, 102, 104, 115, 123, 125, 126, 132, 141, 142, 143, 148, 149, 150, 151, 152, 154, 167], "propag": [4, 5, 6, 17, 18, 19, 27, 32, 49, 52, 55, 56, 75, 94, 96, 104, 115, 125, 140], "neighbor": [4, 18, 19, 36, 42, 70, 72, 115, 125, 144, 149, 150, 164], "formul": [4, 5, 19, 52, 68, 140, 148], "allow": [4, 6, 13, 24, 29, 30, 31, 34, 36, 37, 41, 42, 47, 48, 51, 54, 55, 57, 58, 62, 68, 70, 71, 75, 76, 78, 81, 82, 91, 96, 97, 98, 104, 106, 109, 110, 111, 115, 116, 119, 120, 123, 124, 125, 126, 127, 129, 130, 132, 135, 136, 137, 140, 142, 148, 150, 151, 152, 153, 158, 162, 164, 166], "easi": [4, 6, 11, 31, 41, 62, 71, 89, 98, 99, 100, 142, 153, 167], "extens": [4, 17, 19, 24, 26, 30, 32, 52, 55, 58, 62, 67, 71, 89, 96, 97, 109, 125, 126, 132, 148, 160, 164, 170], "problem": [4, 5, 7, 16, 17, 18, 19, 22, 26, 27, 29, 30, 31, 38, 39, 42, 45, 48, 49, 62, 66, 70, 71, 72, 75, 78, 82, 85, 87, 88, 93, 95, 96, 99, 102, 104, 107, 111, 116, 119, 120, 122, 123, 126, 130, 132, 136, 137, 140, 142, 144, 148, 149, 150, 151, 152, 153, 154, 161, 165], "algorithm": [4, 7, 19, 27, 34, 41, 42, 48, 56, 88, 94, 96, 97, 104, 108, 115, 127, 140, 142, 148, 150, 152, 164], "brief": [4, 59, 141, 151], "subroutin": [4, 6, 9, 16, 24, 34, 36, 67, 115, 123, 140, 148, 149, 161, 167, 170], "equat": [4, 5, 16, 17, 18, 27, 38, 39, 48, 49, 52, 64, 68, 82, 87, 88, 89, 91, 96, 97, 98, 101, 104, 105, 106, 118, 120, 123, 125, 127, 128, 140, 148, 150, 151, 152, 154, 162, 167, 170], "solv": [4, 5, 8, 16, 17, 18, 19, 22, 28, 38, 39, 49, 52, 60, 62, 64, 87, 89, 91, 94, 96, 101, 102, 105, 118, 128, 140, 141, 148, 162, 167, 170], "adapt": [4, 7, 17, 19, 32, 42, 49, 56, 57, 70, 71, 78, 88, 115, 127, 130, 132, 140, 142, 147, 148, 149, 151, 167], "mesh": [4, 7, 17, 19, 35, 49, 56, 70, 71, 78, 81, 88, 115, 130, 147, 148, 167], "amrclaw": [4, 5, 6, 12, 15, 16, 19, 21, 22, 24, 25, 26, 30, 38, 39, 41, 42, 44, 46, 47, 48, 50, 56, 59, 60, 61, 62, 64, 70, 71, 76, 77, 78, 85, 96, 97, 105, 111, 112, 115, 116, 139, 140, 142, 145, 146, 148, 151, 156, 157, 160, 161, 165], "detail": [4, 5, 10, 16, 24, 25, 27, 28, 30, 31, 32, 34, 36, 38, 39, 41, 44, 47, 50, 52, 55, 58, 61, 62, 64, 65, 66, 70, 71, 75, 78, 82, 86, 91, 92, 93, 94, 96, 97, 98, 99, 100, 101, 102, 104, 114, 115, 116, 120, 125, 127, 132, 135, 140, 142, 147, 148, 151, 153, 158, 162, 165, 166, 167, 170], "content": [4, 6, 25, 37, 45, 55, 59, 77, 78, 89, 96, 151, 162, 167, 168], "routin": [4, 5, 6, 16, 18, 19, 22, 27, 29, 32, 34, 38, 39, 47, 48, 49, 50, 55, 56, 66, 71, 72, 76, 77, 78, 81, 84, 86, 89, 91, 94, 97, 100, 101, 104, 106, 107, 115, 118, 119, 120, 123, 125, 127, 128, 130, 140, 144, 148, 150, 152, 158, 164, 165, 167, 168, 170], "special": [4, 7, 16, 48, 50, 55, 65, 78, 86, 97, 115, 135, 142, 164], "depth": [4, 5, 16, 17, 18, 19, 24, 32, 34, 35, 37, 42, 47, 48, 49, 52, 68, 72, 75, 81, 83, 141, 143, 144, 151, 162], "averag": [4, 6, 15, 17, 18, 19, 34, 42, 48, 49, 52, 53, 57, 71, 72, 102, 106, 120, 132, 140, 144, 145, 162, 164, 167], "geophys": [4, 16, 17, 25, 48, 52, 78, 148], "flow": [4, 16, 17, 25, 34, 35, 48, 50, 52, 78, 96, 113, 118, 130, 135, 140, 148, 151, 162, 167], "geoclaw": [4, 7, 12, 17, 18, 19, 25, 26, 30, 31, 32, 34, 35, 36, 37, 39, 41, 44, 46, 47, 56, 57, 59, 60, 61, 62, 63, 64, 68, 70, 72, 75, 77, 78, 81, 85, 96, 105, 111, 113, 114, 116, 139, 140, 141, 143, 144, 146, 148, 149, 154, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167], "parallel": [4, 24, 25, 47, 76, 87, 93, 95, 96, 98, 101, 103, 105, 109, 115, 116, 118, 125, 149], "ten": [4, 78], "thousand": [4, 78], "core": [4, 12, 78, 116, 127, 137], "wish": [4, 13, 14, 15, 24, 31, 38, 39, 52, 55, 62, 71, 80, 81, 96, 101, 104, 105, 107, 111, 113, 115, 125, 145, 153, 156, 157, 165], "discrib": 4, "book": [4, 12, 17, 27, 31, 46, 85, 103, 140], "levequ": [4, 16, 17, 26, 32, 56, 78, 92, 94, 96, 104, 110, 140, 148, 167, 170], "fvmhp": [4, 12, 16, 17, 27, 46, 78, 140, 148, 167, 170], "virtual": [4, 13, 27, 29, 106], "were": [4, 6, 14, 19, 22, 34, 45, 47, 58, 64, 67, 71, 72, 89, 115, 118, 119, 125, 128, 132, 135, 136, 137, 142, 144, 154, 162], "4": [4, 7, 8, 9, 13, 16, 17, 25, 27, 30, 32, 34, 35, 36, 39, 41, 42, 44, 45, 47, 48, 52, 55, 57, 58, 59, 66, 67, 68, 70, 71, 72, 76, 77, 81, 82, 84, 95, 96, 97, 98, 99, 101, 102, 104, 105, 109, 111, 115, 116, 118, 119, 124, 127, 132, 133, 135, 137, 139, 142, 148, 149, 150, 151, 152, 160, 161, 162, 164, 169], "3": [4, 6, 7, 15, 16, 19, 22, 24, 26, 27, 32, 34, 35, 36, 39, 41, 45, 47, 48, 55, 57, 59, 62, 63, 68, 71, 72, 75, 77, 82, 84, 85, 88, 91, 92, 94, 97, 98, 99, 102, 103, 104, 106, 110, 111, 115, 125, 127, 130, 136, 138, 140, 142, 145, 148, 149, 150, 151, 152, 160, 161, 162, 164, 167, 170], "pointer": [4, 16, 18, 19, 58, 75, 81, 84, 104, 109, 123], "code": [4, 5, 6, 7, 8, 12, 14, 16, 21, 22, 23, 24, 25, 26, 29, 31, 34, 35, 36, 37, 38, 39, 41, 43, 44, 45, 47, 48, 49, 52, 54, 56, 57, 58, 60, 65, 66, 67, 68, 74, 75, 76, 77, 78, 80, 82, 84, 85, 86, 88, 89, 94, 96, 97, 98, 99, 101, 104, 105, 108, 110, 111, 114, 117, 118, 119, 120, 123, 124, 125, 126, 127, 128, 129, 130, 132, 137, 139, 140, 141, 142, 146, 148, 149, 150, 151, 152, 153, 158, 160, 161, 162], "bibliographi": [4, 27], "paper": [4, 5, 6, 16, 19, 32, 48, 58, 92, 96], "distribut": [4, 12, 13, 31, 32, 58, 65, 75, 78, 86, 104, 110, 130], "under": [4, 7, 24, 34, 36, 40, 55, 56, 58, 61, 65, 67, 81, 86, 94, 96, 116, 125, 127, 138], "term": [4, 18, 19, 27, 48, 49, 52, 65, 75, 89, 94, 95, 104, 115, 118, 126, 127, 136, 137, 141, 148, 150, 151, 152, 156, 157], "berkelei": [4, 65, 86], "bsd": [4, 65, 86, 127], "contribut": [4, 26, 27, 61, 86, 89, 96, 101, 104, 113, 116], "its": [4, 6, 13, 18, 19, 24, 31, 34, 42, 52, 55, 65, 67, 70, 75, 77, 86, 91, 92, 93, 94, 96, 101, 103, 104, 106, 109, 115, 150, 164, 170], "incept": 4, "1994": [4, 65], "major": [4, 24, 59, 86, 89, 117, 119, 120, 121, 126, 128, 133, 136, 137], "design": [4, 29, 30, 55, 86, 88, 108, 142, 166], "made": [4, 19, 20, 24, 30, 32, 37, 62, 103, 106, 118, 119, 120, 125, 127, 130, 132, 135, 136, 137, 142, 144, 151, 159, 162, 164, 167], "individu": [4, 24, 25, 55, 63, 66, 67, 71, 94, 115, 116, 158], "randal": [4, 17, 96], "univers": [4, 17, 26, 58, 65, 86, 103], "washington": [4, 17, 26, 58, 65, 129, 142, 164], "rjlevequ": [4, 19, 30, 31], "marsha": [4, 6, 17], "berger": [4, 6, 17], "courant": [4, 6, 49, 115, 126, 148, 149, 150, 152], "institut": 4, "nyu": 4, "mjberger": 4, "jan": [4, 59], "olav": 4, "langseth": [4, 17], "norwegian": 4, "defenc": 4, "research": [4, 17, 48, 52, 86, 104, 114], "establish": 4, "david": [4, 17, 86, 96, 104], "georg": [4, 17, 32], "usg": [4, 32, 166], "cascad": 4, "volcano": 4, "observatori": 4, "dlgeorg": 4, "ketcheson": [4, 17, 79, 86, 96, 104], "kaust": [4, 26], "ketch": 4, "kyle": [4, 17, 86, 92, 96, 97, 102], "mandli": [4, 17, 86, 92, 96, 97, 102], "ut": 4, "austin": 4, "contributor": [4, 26, 65, 96], "aron": [4, 17, 86, 96], "ahmadia": [4, 17, 86, 96], "amal": [4, 17, 86, 96], "alghamdi": [4, 17, 86, 96], "ghamdi": 4, "ian": 4, "bollig": 4, "bolliger32": 4, "peter": 4, "blossei": 4, "donna": [4, 17], "calhoun": [4, 17, 55], "donnabois": 4, "ond\u0159ej": 4, "\u010dert\u00edk": 4, "certik": [4, 86], "brisa": 4, "davi": [4, 17], "brisadavi": [4, 128], "gradi": [4, 17, 86], "lemoin": [4, 17, 86], "gradylemoin": 4, "sorin": 4, "mitran": [4, 17], "matteo": [4, 17, 86, 96], "parsani": [4, 17, 86, 96], "mparsani": 4, "xinsheng": [4, 56], "qin": [4, 56], "xinshengqin": [4, 56], "avi": 4, "schwarzschild": 4, "aks2203": 4, "andi": 4, "terrel": 4, "aterrel": 4, "chri": 4, "vogl": 4, "cjvogl": 4, "numer": [4, 17, 55, 110, 128], "student": 4, "toward": [4, 32], "bug": [4, 8, 12, 24, 26, 44, 55, 68, 76, 82, 86, 118, 122, 123, 124, 125, 127, 132, 133, 134, 137], "suggest": [4, 18, 19, 26, 31, 51, 57, 58, 60, 62, 84, 85, 110, 138, 140, 151, 169], "improv": [4, 13, 24, 26, 34, 36, 55, 58, 97, 110, 118, 119, 120, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 148], "explor": [4, 36, 63, 82, 84], "thank": [4, 96], "pleas": [4, 26, 30, 58, 60, 61, 62, 86, 88, 91, 93, 96, 97, 99, 101, 103, 104, 105, 107, 113, 127, 132, 138, 140, 158], "itself": [4, 75, 81, 110, 130, 140, 151, 164], "well": [4, 6, 19, 30, 35, 48, 49, 55, 56, 58, 62, 63, 70, 75, 76, 77, 78, 81, 84, 85, 103, 104, 113, 126, 127, 130, 135, 141, 144, 148, 149, 156, 157, 158, 167, 170], "citat": [4, 19, 59], "similar": [4, 13, 16, 18, 30, 34, 36, 39, 47, 49, 55, 64, 88, 89, 97, 101, 104, 108, 127, 132, 151, 158, 159, 160, 162], "team": [4, 26, 65], "2024": [4, 20, 138], "10": [4, 17, 18, 19, 30, 32, 34, 36, 42, 49, 55, 56, 57, 59, 61, 62, 82, 88, 91, 94, 115, 124, 125, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 142, 148, 149, 150, 152, 154, 162], "http": [4, 12, 13, 17, 19, 26, 28, 30, 31, 32, 42, 51, 55, 56, 58, 59, 61, 62, 65, 70, 75, 85, 86, 89, 90, 97, 99, 101, 110, 111, 118, 122, 124, 125, 126, 128, 129, 132, 133, 134, 135, 136, 137, 138, 141, 158, 164], "www": [4, 13, 17, 32, 42, 48, 58, 65, 70, 86, 89, 94, 97, 99, 118, 126, 128, 135, 136, 158, 164], "org": [4, 17, 19, 48, 56, 58, 59, 65, 86, 89, 90, 94, 97, 99, 110, 111, 118, 124, 126, 128, 132, 133, 134, 135, 136, 137, 164], "doi": [4, 17, 56, 59, 61, 118, 130, 131, 132, 133, 134, 135, 136, 137, 138], "5281": [4, 59, 118, 130, 131, 132, 133, 134, 135, 136, 137, 138], "zenodo": [4, 61, 118, 130, 131, 132, 133, 134, 135, 136, 137, 138], "10896214": [4, 138], "here": [4, 13, 16, 18, 19, 31, 36, 41, 42, 52, 59, 62, 63, 70, 78, 82, 84, 88, 91, 96, 97, 99, 101, 102, 107, 108, 111, 113, 115, 123, 140, 141, 142, 159, 164, 170], "bibtex": [4, 59], "misc": [4, 129, 131], "url": [4, 12, 17, 55, 59, 127, 128, 162, 164], "year": [4, 17, 24, 55, 63, 96, 117, 128, 158], "releas": [4, 19, 20, 24, 27, 30, 31, 46, 49, 55, 60, 61, 62, 90, 96, 97, 104, 105, 110], "refer": [4, 5, 19, 22, 32, 34, 35, 36, 38, 39, 41, 48, 50, 55, 59, 66, 67, 71, 75, 88, 92, 94, 97, 98, 102, 104, 106, 111, 113, 127, 129, 139, 140, 142, 151, 158, 162, 164, 166, 167], "particular": [4, 6, 12, 22, 24, 30, 32, 34, 44, 47, 48, 50, 52, 55, 56, 59, 65, 66, 67, 71, 78, 82, 83, 85, 86, 88, 102, 103, 104, 106, 108, 113, 114, 115, 116, 118, 120, 123, 124, 125, 126, 127, 129, 130, 132, 147, 158, 159, 170], "obtain": [4, 6, 12, 34, 46, 47, 49, 50, 52, 62, 63, 72, 97, 98, 99, 115, 118, 132, 140, 144, 153, 162, 170], "your": [4, 6, 15, 16, 18, 19, 21, 22, 26, 27, 28, 36, 38, 40, 44, 47, 57, 58, 59, 60, 61, 62, 76, 81, 82, 84, 86, 87, 88, 89, 90, 93, 95, 96, 97, 98, 107, 108, 110, 111, 112, 113, 115, 116, 119, 127, 137, 140, 145, 146, 156, 157, 162, 165, 167], "multipl": [4, 5, 6, 13, 25, 30, 34, 35, 42, 47, 81, 88, 94, 97, 98, 109, 111, 116, 119, 125, 129, 139, 140, 149, 158, 159], "past": [4, 23, 27, 58, 64, 70, 103, 125, 128, 132, 138, 142, 143, 151], "17605": [4, 59, 138], "osf": [4, 138], "io": [4, 58, 59, 85, 98, 103, 138], "kmw6h": [4, 59, 138], "recent": [4, 13, 24, 29, 32, 49, 54, 58, 61, 66, 68, 76, 82, 84, 85, 118, 124, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 140, 154, 166], "articl": [4, 17, 96, 153], "l": [4, 7, 17, 34, 43, 61, 115, 140, 146, 150], "hadjimichael": [4, 17, 86], "2016": [4, 17, 26, 58], "build": [4, 17, 30, 31, 58, 59, 62, 71, 89, 99, 109, 126, 137, 142], "open": [4, 13, 17, 27, 30, 31, 32, 51, 55, 63, 81, 86, 90, 94, 97, 109, 142, 146, 166, 168], "ecosystem": [4, 17], "pde": [4, 5, 17, 60, 61, 62, 78, 85, 96, 108, 148, 167], "peerj": [4, 17], "scienc": [4, 17, 86], "7717": [4, 17], "c": [4, 16, 17, 30, 31, 32, 44, 55, 63, 65, 82, 86, 88, 89, 94, 102, 107, 108, 140], "68": [4, 17], "mandli2016clawpack": [4, 17], "yianni": [4, 17, 86], "journal": [4, 17, 56, 96, 153], "e68": [4, 17], "publish": [4, 17, 58, 96], "inc": [4, 17, 71], "least": [4, 5, 6, 13, 37, 47, 55, 63, 64, 70, 71, 107, 115, 116, 124, 125, 132, 148, 150, 154, 162, 164], "regard": [4, 41, 124, 158], "click": [4, 12, 13, 20, 30, 55, 58, 59, 116, 118, 126, 135, 136, 137, 138], "link": [4, 11, 13, 15, 17, 20, 21, 22, 26, 27, 30, 34, 36, 44, 45, 48, 55, 56, 57, 58, 59, 61, 63, 110, 111, 112, 118, 126, 135, 136, 137, 138, 140, 141, 143, 145, 152, 156, 157, 162, 166], "classic": [4, 6, 12, 15, 16, 21, 22, 24, 25, 26, 30, 44, 45, 46, 50, 59, 60, 61, 62, 67, 74, 76, 77, 78, 85, 86, 88, 91, 93, 94, 95, 96, 97, 101, 111, 112, 116, 139, 140, 145, 146, 149, 151, 157, 165, 167], "2d": [4, 7, 8, 15, 16, 18, 21, 24, 27, 29, 32, 34, 36, 37, 41, 42, 48, 49, 51, 56, 63, 71, 76, 81, 86, 88, 94, 96, 100, 104, 110, 112, 115, 118, 123, 125, 126, 127, 128, 129, 132, 136, 141, 142, 144, 145, 148, 149, 152, 154, 156, 157, 164, 168, 170], "leveque97": [4, 17], "3d": [4, 7, 15, 19, 24, 32, 71, 76, 81, 86, 96, 100, 104, 112, 115, 118, 119, 121, 123, 124, 125, 128, 136, 140, 142, 145, 148, 149, 156, 157, 168, 170], "langsethleveque00": [4, 17], "amr": [4, 7, 8, 16, 18, 19, 22, 25, 27, 29, 30, 34, 36, 37, 41, 47, 48, 49, 56, 63, 71, 72, 73, 77, 78, 81, 86, 94, 118, 124, 126, 127, 128, 130, 132, 135, 144, 147, 148, 150, 152, 161, 167], "bergerleveque98": [4, 6, 7, 17], "f": [4, 5, 6, 16, 17, 18, 22, 24, 27, 29, 30, 33, 66, 67, 89, 91, 97, 98, 101, 102, 104, 106, 107, 109, 119, 123, 126, 127, 128, 132, 141, 148, 149, 150, 152, 164, 165, 167], "balelevmitross02": [4, 17, 148, 170], "bergergeorgelevequemandli11": [4, 17], "levequegeorgeberg": [4, 17], "order": [4, 5, 6, 13, 16, 17, 18, 19, 31, 32, 34, 36, 47, 52, 57, 62, 64, 67, 70, 71, 72, 75, 77, 78, 82, 84, 85, 86, 88, 91, 92, 94, 96, 97, 98, 100, 101, 104, 108, 109, 110, 111, 115, 118, 123, 127, 132, 136, 140, 142, 144, 147, 148, 149, 150, 152, 158, 162, 164, 165, 167, 170], "sharpclaw": [4, 25, 27, 78, 86, 93, 95, 96, 101, 119, 140], "ketparlev13": [4, 17, 78, 96, 140], "ketchesonmandliet": [4, 17], "support": [4, 8, 13, 18, 19, 24, 36, 37, 41, 44, 49, 52, 55, 60, 61, 73, 75, 77, 85, 86, 88, 89, 94, 97, 98, 100, 102, 104, 115, 118, 123, 125, 126, 127, 128, 132, 133, 135, 136, 140, 142, 148, 149, 151, 158, 159, 162, 165, 168], "part": [4, 5, 19, 24, 26, 32, 36, 48, 51, 52, 62, 63, 64, 86, 89, 99, 105, 106, 108, 110, 114, 116, 118, 129, 167], "nsf": 4, "grant": [4, 86], "dm": 4, "8657319": 4, "9204329": 4, "9303404": 4, "9505021": 4, "96226645": 4, "9803442": 4, "0106511": 4, "cm": [4, 32, 75, 82, 142], "0245206": 4, "0609661": 4, "0914942": 4, "1216732": 4, "ear": 4, "1331412": 4, "cmmi": 4, "1536198": 4, "doe": [4, 5, 11, 16, 19, 22, 29, 30, 36, 42, 43, 49, 52, 55, 57, 58, 62, 71, 78, 82, 85, 94, 103, 106, 109, 115, 116, 120, 125, 129, 132, 135, 139, 140, 141, 144, 158, 164, 165, 167], "de": [4, 17, 86, 96, 142], "fg06": 4, "93er25181": 4, "fg03": 4, "96er25292": 4, "fg02": 4, "88er25053": 4, "92er25139": 4, "00er2592": 4, "fc02": 4, "01er25474": 4, "afosr": 4, "f49620": 4, "94": 4, "0132": 4, "nih": 4, "5r01ar53652": 4, "onr": 4, "n00014": 4, "09": [4, 94, 102, 161], "0649": 4, "council": 4, "nfr": 4, "through": [4, 13, 30, 36, 38, 39, 47, 49, 52, 55, 70, 71, 78, 81, 89, 101, 106, 108, 109, 111, 114, 115], "program": [4, 50, 52, 67, 78], "101039": 4, "420": 4, "scientif": [4, 17, 85, 96, 99, 110, 137], "divis": [4, 55], "nation": [4, 52, 158], "center": [4, 5, 29, 32, 34, 35, 36, 37, 42, 47, 55, 57, 63, 72, 75, 88, 94, 101, 102, 108, 115, 127, 142, 144, 149, 150, 151, 158, 159, 162, 167], "atmospher": 4, "ncar": 4, "boe": 4, "professorship": 4, "founder": 4, "depart": [4, 158], "mathemat": 4, "comot": 4, "fellowship": 4, "king": [4, 86], "abdullah": [4, 86], "technologi": [4, 86], "contract": [4, 65, 86], "state": [4, 13, 17, 19, 27, 30, 58, 75, 82, 88, 89, 91, 94, 96, 97, 98, 99, 101, 102, 103, 104, 107, 108, 116, 132, 133, 140, 141, 142, 148, 162, 170], "emerg": 4, "manag": [4, 12, 13, 55, 98, 158], "tsunami": [4, 5, 16, 17, 19, 26, 27, 34, 36, 42, 48, 50, 56, 68, 75, 98, 115, 119, 122, 128, 129, 135, 142, 143, 144, 151, 159, 162], "hazard": [4, 34, 48, 68, 143], "mitig": [4, 52], "nasa": 4, "asteroid": [4, 19], "threat": 4, "assess": [4, 52, 143], "project": [4, 5, 26, 27, 32, 52, 55, 58, 59, 75, 86, 90, 125, 126, 137, 149, 164], "planetari": 4, "defens": 4, "offic": 4, "opinion": 4, "conclus": [4, 55], "express": [4, 32, 65, 86, 105, 142], "materi": [4, 45, 65, 75, 86, 113, 130], "those": [4, 6, 10, 12, 18, 19, 24, 26, 52, 55, 56, 59, 70, 78, 88, 89, 91, 98, 101, 106, 115, 116, 119, 130, 132, 138, 139, 153, 160, 164, 167], "necessarili": [4, 42, 77, 97, 116], "agenc": [4, 60, 158, 159], "approach": [5, 7, 13, 18, 19, 30, 31, 41, 47, 49, 58, 61, 74, 81, 89, 96, 99, 101, 109, 115, 123, 125, 126, 128, 140, 141, 147, 167, 170], "introduc": [5, 16, 21, 34, 35, 36, 37, 42, 49, 82, 118, 130, 132, 139, 142, 144, 149, 170], "6": [5, 19, 24, 27, 30, 32, 34, 36, 41, 42, 44, 47, 51, 52, 55, 58, 63, 68, 70, 71, 72, 76, 82, 95, 96, 97, 101, 102, 104, 105, 110, 111, 115, 130, 138, 140, 142, 148, 149, 162, 169], "what": [5, 6, 9, 13, 14, 18, 19, 24, 27, 30, 32, 33, 34, 41, 49, 52, 54, 55, 58, 59, 61, 62, 63, 66, 67, 70, 71, 72, 77, 81, 88, 91, 95, 103, 106, 108, 111, 114, 115, 116, 124, 142, 143, 147, 148, 150, 151, 152, 153, 162, 164, 166, 167], "forward": [5, 64, 104, 115, 128, 167], "becaus": [5, 18, 19, 24, 29, 34, 36, 42, 55, 59, 70, 72, 97, 98, 99, 119, 140, 143, 148], "impact": [5, 19, 75], "autonom": 5, "shift": [5, 32, 52, 57], "perform": [5, 6, 17, 24, 29, 52, 55, 57, 76, 78, 81, 82, 91, 94, 97, 101, 104, 109, 116, 129, 132, 139, 140, 146, 151, 160], "snapshot": [5, 30, 98, 128], "save": [5, 13, 27, 28, 35, 36, 37, 42, 54, 63, 77, 91, 95, 104, 124, 125, 127, 132, 139, 159, 164], "space": [5, 6, 7, 16, 17, 27, 32, 34, 35, 36, 37, 47, 48, 51, 55, 57, 75, 77, 94, 98, 101, 115, 118, 123, 135, 139, 142, 148, 149, 150, 151, 152, 162, 164, 167], "interpol": [5, 6, 16, 19, 27, 32, 35, 37, 42, 47, 48, 57, 63, 64, 71, 75, 82, 118, 125, 132, 135, 142, 143, 144, 158, 159, 164], "regrid": [5, 10, 115, 119, 120, 125, 128, 129, 149, 150, 161], "davisleveque2018": [5, 17], "davis2018": [5, 17], "discuss": [5, 18, 19, 26, 30, 32, 52, 57, 70, 75, 97, 108, 110, 111, 115, 118, 125, 127, 140, 151, 154, 170], "when": [5, 14, 15, 16, 19, 22, 30, 31, 32, 34, 36, 37, 42, 43, 44, 47, 49, 53, 54, 55, 57, 58, 59, 61, 62, 64, 68, 70, 71, 75, 76, 77, 78, 81, 82, 84, 88, 95, 96, 97, 99, 100, 104, 107, 111, 115, 116, 118, 119, 120, 122, 124, 125, 126, 130, 132, 134, 135, 136, 140, 142, 143, 144, 145, 147, 148, 149, 150, 151, 152, 153, 158, 162, 164, 165, 166, 167, 168, 170], "accur": [5, 18, 19, 49, 52, 72, 75, 96, 104, 132, 148, 167, 170], "entir": [5, 6, 36, 41, 52, 55, 63, 70, 72, 75, 76, 78, 88, 98, 103, 113, 115, 120, 142, 164], "domain": [5, 6, 16, 17, 35, 36, 41, 42, 49, 52, 55, 58, 63, 75, 77, 87, 88, 89, 91, 99, 101, 103, 106, 113, 115, 118, 135, 149, 150, 151, 152, 162], "dimens": [5, 6, 7, 16, 22, 24, 27, 47, 48, 51, 57, 63, 71, 72, 88, 89, 91, 97, 99, 101, 102, 103, 106, 108, 115, 118, 127, 130, 140, 148, 149, 150, 152, 164, 167], "int_a": 5, "phi": 5, "dx": [5, 15, 17, 32, 34, 35, 36, 51, 57, 64, 75, 77, 89, 94, 98, 123, 127, 145, 162, 164, 167], "leq": [5, 142], "backward": [5, 30, 32, 35, 51, 63, 75, 77, 97, 120, 121, 136, 164], "small": [5, 16, 19, 36, 42, 47, 68, 70, 115, 116, 118, 119, 124, 139, 148, 150, 151, 162, 164, 166], "sai": [5, 13, 16, 30, 63, 107, 115], "x_1": [5, 142], "x_2": [5, 142], "might": [5, 10, 13, 14, 16, 24, 30, 31, 37, 38, 39, 40, 41, 42, 51, 55, 57, 58, 62, 67, 70, 71, 72, 76, 82, 85, 88, 98, 102, 111, 113, 114, 115, 119, 148, 149, 162, 164, 166, 167], "box": [5, 32, 35, 55, 63, 142, 164], "interv": [5, 47, 49, 51, 88, 108, 115, 132, 142, 148, 151], "elsewher": [5, 26, 42, 96, 142], "sharpli": 5, "peak": 5, "gaussian": [5, 88, 108, 152], "final": [5, 32, 37, 44, 58, 64, 71, 75, 88, 91, 98, 108, 113, 119, 139, 141, 148, 150, 152, 164], "necessari": [5, 6, 13, 18, 19, 30, 36, 37, 38, 39, 50, 52, 55, 58, 59, 62, 63, 71, 75, 77, 78, 84, 88, 89, 94, 97, 118, 123, 125, 127, 139, 140, 147, 148, 149, 162, 165, 167], "place": [5, 16, 22, 26, 30, 32, 38, 39, 55, 58, 62, 66, 67, 74, 96, 98, 99, 101, 105, 111, 119, 125, 137, 167], "earlier": [5, 19, 22, 24, 32, 34, 41, 47, 57, 75, 88, 101, 119, 126, 139, 162, 164], "help": [5, 7, 9, 25, 26, 27, 30, 31, 42, 43, 53, 58, 60, 66, 81, 84, 96, 99, 105, 109, 116, 124, 130, 140, 153, 165], "identifi": [5, 38, 39, 42, 55, 70, 89, 115, 130, 158], "hat": 5, "given": [5, 19, 32, 42, 51, 55, 57, 63, 68, 71, 75, 92, 97, 99, 103, 104, 106, 109, 115, 132, 142, 143, 144, 151, 162, 164, 167], "t_r": 5, "reach": [5, 115, 139], "acoustics_1d_adjoint": 5, "acoustics_2d_adjoint": 5, "main": [5, 11, 12, 19, 21, 30, 42, 46, 58, 59, 70, 71, 78, 89, 91, 97, 101, 108, 109, 116, 118, 126, 135], "subdirectori": [5, 12, 22, 24, 25, 38, 39, 58, 59, 62, 66, 74, 84, 93, 98, 111, 116, 135, 147, 151, 153, 160, 164], "must": [5, 6, 13, 16, 18, 19, 22, 24, 30, 32, 34, 36, 42, 46, 49, 50, 55, 58, 61, 65, 66, 67, 70, 71, 75, 76, 77, 86, 89, 96, 97, 98, 101, 103, 104, 106, 107, 108, 109, 111, 115, 119, 123, 140, 142, 143, 144, 148, 149, 150, 151, 152, 158, 164, 165, 166, 167, 170], "makefil": [5, 6, 11, 14, 15, 16, 21, 22, 25, 27, 30, 36, 38, 39, 44, 58, 76, 78, 82, 84, 89, 95, 96, 115, 118, 119, 123, 125, 127, 128, 130, 136, 144, 145, 148, 150, 151, 152, 153, 156, 157, 162, 165, 167], "coeffici": [5, 68, 101, 102, 104, 106, 107, 108, 140, 151], "matric": [5, 140, 170], "transpos": 5, "vice": 5, "versa": 5, "q_t": [5, 101, 102, 104, 108, 167, 170], "q_x": [5, 102, 108, 170], "_x": [5, 42, 70, 102, 104, 164, 167, 170], "eigenvalu": 5, "unchang": [5, 71], "upon": [5, 106], "transform": [5, 44], "eigenvector": [5, 140, 170], "right": [5, 19, 32, 34, 65, 68, 75, 86, 94, 99, 101, 102, 106, 108, 132, 139, 140, 142, 170], "rp1_acoustics_variable_adjoint": 5, "f90": [5, 9, 15, 18, 19, 22, 33, 34, 36, 42, 47, 49, 56, 66, 67, 76, 77, 85, 101, 112, 115, 119, 123, 125, 127, 128, 129, 130, 132, 133, 136, 140, 141, 144, 145, 154, 156, 157, 162, 165, 167], "boundari": [5, 7, 19, 22, 27, 42, 55, 63, 67, 70, 75, 76, 89, 94, 102, 104, 108, 113, 120, 123, 127, 142, 148, 150, 152], "condit": [5, 7, 19, 22, 27, 65, 67, 78, 86, 87, 88, 89, 91, 98, 104, 112, 119, 120, 123, 127, 143, 148, 150, 151, 152], "adjust": [5, 13, 18, 19, 22, 34, 35, 48, 63, 77, 94, 98, 136, 139, 143, 148, 167], "principl": [5, 164, 167], "vanish": 5, "dure": [5, 24, 34, 42, 47, 63, 75, 78, 119, 143, 144, 150, 151, 152, 154, 162], "integr": [5, 24, 57, 64, 86, 96, 98, 104, 119, 120, 124, 150, 152, 161, 162, 167], "qinit": [5, 22, 24, 42, 48, 66, 67, 89, 132, 143, 144, 167], "setrun": [5, 6, 7, 8, 14, 16, 21, 22, 27, 34, 35, 36, 37, 38, 39, 41, 42, 43, 45, 48, 49, 50, 52, 63, 64, 66, 68, 70, 77, 78, 82, 96, 112, 113, 115, 119, 123, 124, 125, 128, 130, 132, 135, 136, 137, 139, 140, 143, 144, 154, 158, 162, 165, 167], "clawdata": [5, 19, 41, 49, 77, 119, 123, 139, 148, 149, 150, 151, 152], "tfinal": [5, 77, 88, 91, 108, 139, 148, 150, 152], "via": [5, 13, 24, 25, 26, 30, 31, 32, 36, 38, 39, 44, 47, 50, 52, 55, 58, 59, 61, 62, 64, 66, 70, 71, 75, 76, 78, 82, 85, 88, 94, 97, 100, 103, 105, 107, 111, 115, 116, 118, 127, 130, 140, 142, 146, 151, 153, 156, 157, 162, 164, 167], "num_output_tim": [5, 77, 88, 91, 98, 139, 148, 150, 152], "larg": [5, 6, 12, 19, 22, 36, 37, 38, 39, 42, 52, 55, 57, 58, 71, 76, 81, 96, 98, 99, 115, 116, 118, 124, 132, 135, 139, 142, 144, 148, 149, 164, 166], "frequent": [5, 22, 29, 36, 47, 64, 107, 124, 135], "enough": [5, 47, 49, 58, 64, 70, 149, 159, 161, 162], "them": [5, 13, 20, 24, 30, 31, 32, 34, 47, 51, 55, 58, 71, 78, 86, 88, 93, 97, 98, 99, 101, 109, 113, 116, 118, 120, 129, 135, 136, 137, 142, 155, 158, 164, 167], "reason": [5, 19, 49, 52, 55, 63, 75, 76, 78, 99, 101, 115, 148], "output_format": [5, 36, 37, 77, 91, 98, 135, 148, 150, 152], "binari": [5, 36, 44, 47, 59, 65, 86, 98, 100, 124, 135, 136, 139, 148, 164, 168], "manner": [5, 36, 42, 47, 55, 64, 70, 75, 81, 127, 144, 148, 156, 157, 162], "attribut": [5, 7, 18, 24, 32, 36, 37, 41, 47, 70, 75, 81, 83, 84, 88, 91, 94, 97, 99, 101, 103, 104, 115, 118, 119, 124, 128, 136, 139, 147, 148, 149, 151, 158, 164], "clawutil": [5, 11, 14, 21, 22, 25, 30, 43, 44, 54, 59, 60, 61, 66, 111, 116, 146, 148, 149, 150, 152, 164, 165], "clawrundata": [5, 47, 63, 128, 139, 148, 149, 150, 152], "adjointdata": [5, 128, 129], "ia": 5, "attribur": 5, "toler": [5, 34, 102, 109, 115, 116, 125, 149, 150, 151], "rundata": [5, 18, 19, 24, 34, 36, 41, 42, 47, 49, 63, 64, 115, 119, 130, 137, 139, 144, 148, 149, 150, 151, 152, 154], "use_adjoint": 5, "adjoint_outdir": 5, "abspath": [5, 41], "_output": [5, 13, 14, 34, 36, 38, 39, 47, 54, 64, 71, 82, 84, 93, 98, 100, 103, 124, 131, 165], "period": [5, 6, 16, 34, 66, 88, 101, 115, 118, 148, 150, 152], "t1": [5, 41, 47, 63, 64, 115, 132, 149, 150, 151], "t0": [5, 18, 19, 77, 139, 148, 150, 151, 152, 162], "t2": [5, 41, 47, 63, 64, 115, 132, 149, 150, 151], "addit": [5, 7, 13, 16, 17, 19, 25, 26, 30, 31, 34, 36, 39, 40, 41, 48, 49, 50, 63, 70, 75, 77, 78, 82, 83, 89, 92, 94, 96, 98, 104, 105, 106, 113, 115, 118, 123, 125, 126, 127, 128, 131, 132, 134, 135, 136, 140, 142, 148, 152, 158, 161, 162, 167, 168], "aux": [5, 6, 15, 22, 24, 29, 47, 57, 89, 96, 97, 98, 101, 103, 104, 106, 107, 119, 120, 125, 127, 140, 141, 145, 148, 149, 150, 151, 152, 167], "inner": [5, 115, 128], "product": [5, 32, 65, 86, 109, 115, 128], "amrdata": [5, 24, 34, 115, 130, 132, 149, 150, 151], "aux_typ": [5, 149, 150], "append": [5, 22, 34, 36, 41, 42, 47, 55, 64, 82, 91, 103, 115, 124, 125, 137, 139, 140, 150, 151], "num_aux": [5, 89, 97, 99, 101, 102, 106, 140, 148, 149, 150, 152, 167], "len": [5, 32, 37, 94, 150, 152, 164], "innerprod_index": 5, "base": [5, 6, 13, 19, 22, 23, 24, 30, 31, 32, 34, 35, 36, 48, 49, 51, 55, 56, 57, 58, 63, 64, 67, 68, 70, 71, 75, 78, 89, 91, 92, 94, 96, 97, 102, 103, 104, 106, 108, 109, 115, 117, 123, 126, 128, 132, 135, 136, 143, 148, 149, 150, 151, 152, 158, 164, 167, 170], "richardson": [5, 7, 24, 149, 150], "error": [5, 16, 22, 38, 39, 43, 55, 62, 71, 76, 82, 91, 96, 97, 98, 109, 115, 116, 128, 132, 137, 149, 150, 158, 165], "estimat": [5, 150], "flag_richardson": [5, 115, 124, 149, 150], "flag_richardson_tol": [5, 115, 149, 150], "1e": [5, 70, 152], "flag2refin": [5, 7, 24, 149, 150], "flag2refine_tol": [5, 115, 149, 150], "01": [5, 17, 42, 77, 94, 164], "we": [5, 6, 18, 19, 24, 26, 28, 34, 38, 39, 41, 42, 47, 52, 55, 57, 58, 59, 60, 62, 67, 70, 72, 75, 81, 84, 88, 89, 90, 91, 93, 94, 97, 98, 99, 100, 101, 104, 105, 106, 107, 108, 109, 110, 113, 116, 127, 130, 135, 137, 140, 141, 142, 164], "attempt": [5, 8, 11, 22, 35, 38, 39, 66, 97, 103, 109, 116, 119, 133, 158, 164, 165], "estim": [5, 68, 115, 149, 151], "step": [5, 6, 10, 16, 18, 19, 21, 30, 34, 36, 38, 39, 40, 47, 55, 58, 59, 64, 71, 77, 78, 81, 84, 86, 87, 88, 89, 91, 98, 101, 104, 106, 108, 113, 115, 118, 119, 124, 125, 135, 139, 140, 146, 148, 149, 150, 151, 152, 162, 170], "extrapol": [5, 7, 16, 24, 72, 101, 108, 127, 148, 149, 150, 152], "togeth": [5, 16, 30, 31, 32, 58, 60, 75, 115, 135], "experiment": [5, 86], "simpli": [5, 13, 19, 36, 38, 39, 40, 42, 47, 49, 55, 57, 66, 67, 70, 72, 88, 90, 91, 93, 98, 99, 105, 116, 118, 140, 142, 153, 158, 164, 167, 168], "magnitud": [5, 32, 115, 127, 151], "greater": [5, 34, 63, 68, 70, 105, 115, 139, 148, 149, 151], "model": [5, 12, 16, 17, 18, 19, 26, 27, 32, 34, 44, 48, 49, 50, 56, 57, 68, 98, 115, 124, 129, 130, 131, 142, 143, 144, 151, 154, 158, 159, 162], "davisleveque2016": [5, 17], "chile2010_adjoint": 5, "shallow": [5, 15, 16, 17, 18, 19, 27, 34, 36, 42, 48, 49, 52, 56, 70, 78, 89, 96, 112, 118, 120, 121, 123, 125, 127, 128, 136, 137, 140, 144, 145, 151, 156, 157, 162, 167], "water": [5, 16, 17, 18, 19, 27, 36, 42, 47, 48, 49, 50, 51, 52, 63, 70, 78, 81, 89, 96, 118, 120, 121, 125, 127, 128, 137, 140, 142, 143, 144, 151, 162, 164, 166, 167], "while": [5, 13, 16, 19, 32, 42, 55, 71, 75, 82, 84, 89, 94, 98, 99, 104, 109, 127, 140, 144, 151, 166], "suitabl": [5, 8, 16, 18, 19, 22, 48, 52, 55, 73, 77, 103, 114, 140, 143, 158, 164], "To": [5, 6, 13, 14, 18, 19, 20, 24, 27, 30, 31, 38, 39, 40, 41, 42, 43, 47, 50, 53, 55, 56, 59, 66, 69, 70, 71, 75, 76, 77, 82, 84, 85, 88, 90, 92, 93, 96, 97, 98, 99, 100, 101, 104, 105, 108, 111, 113, 114, 115, 116, 118, 123, 125, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 139, 143, 146, 148, 149, 153, 162, 168], "date": [5, 17, 30, 43, 51, 55, 58, 59, 66, 82, 158, 165], "across": [5, 115, 125, 162, 164], "ocean": [5, 16, 17, 19, 34, 49, 52, 55, 113, 115, 142, 151, 156, 157, 162], "wai": [5, 6, 13, 16, 19, 28, 30, 36, 38, 39, 41, 42, 47, 49, 55, 57, 58, 61, 62, 63, 65, 66, 82, 84, 85, 86, 88, 91, 93, 94, 99, 101, 103, 105, 108, 110, 111, 113, 114, 119, 125, 126, 127, 130, 137, 138, 140, 142, 147, 148, 155, 159, 162, 167, 169, 170], "target": [5, 62, 82, 89, 101, 130], "possibli": [5, 32, 36, 70, 88, 94, 111, 118, 124, 144], "deep": [5, 49, 70], "amplitud": [5, 125], "compar": [5, 18, 19, 24, 39, 47, 49, 52, 55, 59, 82, 98, 115, 116, 143, 149, 160, 166, 170], "essenti": [5, 57, 71, 104, 151, 162], "rest": [5, 24, 84, 113, 127, 143, 156, 157, 162, 164], "henc": [5, 36, 57, 58, 67, 72, 104, 110, 111, 115, 144], "take": [5, 6, 24, 29, 30, 32, 34, 37, 51, 58, 68, 70, 71, 75, 82, 88, 94, 101, 104, 108, 109, 110, 115, 116, 118, 122, 128, 136, 144, 148, 149, 150, 151, 164, 167, 170], "rpn2_geoclaw_adjoint_qwav": 5, "rpt2_geoclaw_adjoint_qwav": 5, "non": [5, 16, 59, 70, 78, 89, 101, 108, 128, 130, 148, 150, 152, 158, 170], "vector": [5, 24, 88, 92, 98, 106, 127, 135, 140, 141], "split": [5, 6, 76, 94, 97, 104, 123, 124, 132, 148, 149, 150, 152, 161, 167, 170], "flux": [5, 17, 34, 36, 37, 94, 102, 104, 140, 148, 170], "comment": [5, 11, 19, 26, 53, 59, 126, 135, 139], "rpn2": [5, 140], "basic": [6, 10, 12, 27, 32, 38, 40, 48, 61, 70, 71, 88, 94, 96, 97, 98, 102, 104, 116, 140, 141, 158, 170], "strategi": 6, "logic": [6, 16, 17, 34, 132, 151], "rectangular": [6, 7, 16, 17, 32, 34, 37, 41, 42, 48, 50, 63, 70, 94, 115, 127, 130, 135, 149, 151, 162], "too": [6, 19, 51, 55, 58, 59, 118, 124, 142, 150, 152, 154], "portion": [6, 36, 42, 55, 70, 89, 135, 161], "factor": [6, 55, 149, 151, 161, 164], "direct": [6, 8, 16, 24, 32, 34, 36, 38, 39, 47, 49, 51, 55, 59, 63, 65, 66, 71, 75, 76, 82, 86, 91, 101, 108, 115, 126, 140, 148, 149, 151, 164], "anisotrop": [6, 24], "perhap": [6, 12, 19, 34, 42, 47, 58, 82, 106, 109, 115, 142], "section": [6, 13, 16, 36, 38, 39, 42, 44, 49, 50, 52, 58, 59, 67, 71, 81, 84, 96, 116, 132, 139, 148, 151, 164], "cfl": [6, 49, 94, 98, 104, 108, 118, 119, 124, 148, 150, 151, 152], "spatial": [6, 17, 27, 32, 36, 37, 41, 42, 47, 48, 49, 64, 68, 72, 101, 115, 119, 123, 130, 132, 140, 143, 149, 150, 151, 152, 170], "reduc": [6, 16, 36, 42, 49, 55, 118, 124, 126, 135, 170], "thu": [6, 51, 98, 101, 127, 158], "proce": [6, 18, 19, 30, 151], "advanc": [6, 17, 36, 56, 70, 76, 108, 124, 136, 148, 149, 167], "taken": [6, 34, 70, 75, 98, 104, 115, 148, 167], "around": [6, 32, 34, 42, 63, 97, 113, 116, 130, 149, 150, 158, 164, 167], "librari": [6, 13, 15, 16, 18, 19, 22, 24, 27, 29, 30, 34, 36, 38, 39, 44, 47, 49, 56, 63, 66, 76, 77, 78, 86, 92, 97, 99, 104, 109, 111, 112, 115, 125, 130, 144, 145, 149, 156, 157, 165, 167], "bcnamr": [6, 16, 127, 148, 150, 167], "check": [6, 14, 15, 16, 22, 34, 38, 39, 43, 44, 54, 55, 56, 58, 59, 60, 62, 66, 71, 82, 85, 88, 89, 91, 96, 99, 103, 104, 106, 108, 109, 111, 112, 115, 120, 129, 142, 144, 145, 149, 150, 156, 157, 158, 164, 165, 166, 167], "denot": [6, 19, 24, 37, 47, 57, 140, 164], "procedur": [6, 16, 42, 48, 49, 59, 167], "updat": [6, 12, 13, 24, 25, 27, 34, 53, 56, 61, 62, 64, 84, 96, 104, 106, 107, 110, 113, 118, 119, 123, 125, 126, 127, 128, 129, 130, 140, 149, 150, 152, 155, 158, 161, 167], "consist": [6, 27, 34, 36, 51, 55, 59, 63, 99, 110, 125, 135, 136, 140, 142, 151, 162, 167], "replac": [6, 13, 31, 36, 41, 47, 52, 56, 58, 59, 61, 64, 66, 81, 89, 93, 97, 99, 100, 101, 102, 106, 109, 116, 118, 119, 125, 127, 129, 130, 135, 139, 140, 144, 164, 165], "ly": [6, 70], "within": [6, 16, 30, 36, 37, 58, 62, 70, 72, 78, 82, 100, 109, 111, 115, 140, 142, 147, 153, 164], "approxim": [6, 16, 18, 19, 27, 35, 52, 55, 72, 75, 140], "lead": [6, 13, 24, 34, 36, 52, 55, 68, 71, 75, 111, 114, 132, 144, 149], "total": [6, 32, 36, 55, 75, 77, 98, 104, 148, 149, 150, 152, 161], "mass": [6, 98, 118, 154], "restor": 6, "global": [6, 14, 94, 106, 109, 118, 143, 162, 166, 167], "fix": [6, 21, 22, 24, 27, 35, 37, 41, 47, 48, 49, 58, 59, 63, 64, 66, 70, 72, 86, 97, 102, 118, 119, 120, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 141, 148, 150, 152, 164], "up": [6, 13, 19, 24, 30, 31, 32, 34, 36, 38, 39, 42, 43, 47, 48, 55, 58, 59, 63, 66, 70, 71, 75, 77, 82, 88, 89, 91, 93, 95, 96, 97, 99, 104, 105, 108, 111, 113, 115, 116, 118, 123, 124, 127, 130, 132, 137, 142, 144, 147, 150, 152, 161, 162, 165, 166], "style": [6, 24, 30, 32, 36, 41, 53, 55, 70, 73, 82, 86, 91, 127, 151], "olig": [6, 17], "colella": [6, 17], "bergeroliger84": [6, 17], "bergercolella89": [6, 17], "fortran": [6, 9, 11, 13, 14, 19, 22, 25, 29, 30, 32, 34, 35, 36, 37, 38, 47, 48, 50, 57, 60, 62, 66, 67, 68, 72, 76, 77, 78, 81, 84, 86, 88, 89, 91, 94, 96, 97, 99, 101, 102, 104, 105, 106, 109, 111, 118, 123, 124, 125, 127, 128, 129, 135, 136, 140, 141, 146, 149, 150, 151, 152, 158, 160, 161, 162], "written": [6, 11, 27, 32, 34, 36, 37, 43, 47, 62, 63, 64, 65, 75, 77, 78, 82, 86, 95, 96, 97, 101, 125, 140, 148, 149, 150, 151, 152, 158, 164, 167], "ga": [6, 102], "dynam": [6, 22, 32, 36, 52, 75, 78, 149], "merg": [6, 13, 27, 30, 56, 58, 59, 62, 123], "earli": [6, 22, 144], "mjb": [6, 17], "rjl": [6, 17, 111, 129], "fulli": [6, 52, 55, 56, 126, 130, 140, 151, 158, 159], "consid": [6, 42, 52, 62, 70, 89, 111, 146, 153, 164], "adjac": [6, 16, 34, 48, 115, 144, 148], "equival": [6, 47, 56, 57, 63, 64, 77, 129, 135, 162], "copi": [6, 14, 15, 16, 19, 38, 39, 47, 55, 58, 59, 62, 71, 88, 91, 101, 106, 112, 113, 114, 115, 120, 124, 127, 131, 144, 145, 149, 153, 156, 157, 162, 167], "interior": [6, 16, 42, 77, 106], "howev": [6, 13, 16, 18, 19, 24, 34, 38, 39, 42, 44, 49, 50, 52, 55, 62, 65, 67, 70, 72, 75, 76, 77, 86, 89, 96, 115, 116, 125, 127, 129, 143, 144, 147, 151, 161], "lie": [6, 34, 35, 37, 70, 72, 115, 130, 142], "outsid": [6, 16, 41, 63, 70, 130, 142, 144, 162, 164], "li": [6, 16, 34, 37, 72, 115, 142], "along": [6, 14, 16, 19, 26, 29, 32, 34, 42, 47, 55, 58, 61, 75, 77, 111, 115, 118, 123, 138, 139, 142, 144, 151, 166], "unless": [6, 34, 43, 44, 63, 102, 110, 143, 148, 149, 164], "standard": [6, 16, 19, 32, 34, 36, 49, 55, 57, 71, 77, 89, 92, 104, 111, 115, 116, 150, 151, 152, 153, 162, 167, 170], "beyond": [6, 32, 110, 127], "modifi": [6, 9, 14, 15, 16, 18, 19, 22, 24, 29, 34, 38, 39, 42, 47, 48, 58, 59, 62, 64, 66, 71, 74, 82, 89, 92, 94, 96, 101, 111, 112, 113, 114, 115, 122, 124, 125, 126, 127, 132, 142, 144, 145, 148, 150, 151, 152, 156, 157, 162, 164, 167], "damag": [6, 65, 86], "bcn": [6, 16, 152, 167], "nd": [6, 16, 115, 127, 130, 167], "actual": [6, 29, 32, 36, 57, 62, 63, 71, 75, 82, 92, 97, 109, 113, 143, 151], "softwar": [6, 13, 26, 27, 31, 48, 52, 65, 86, 96, 97, 98, 153, 162], "With": [6, 24, 30, 47, 51, 53, 55, 62, 70, 78, 115, 124, 140, 142, 148], "opposit": [6, 16, 97], "side": [6, 16, 19, 20, 34, 55, 58, 68, 75, 97, 116, 118, 135, 136, 137, 140, 170], "everi": [6, 12, 30, 34, 36, 47, 64, 66, 67, 77, 88, 91, 93, 97, 98, 106, 115, 116, 118, 125, 126, 140, 144, 146, 148, 150, 152, 158, 162, 164, 167], "few": [6, 12, 13, 19, 24, 28, 30, 31, 39, 49, 52, 58, 70, 71, 89, 104, 108, 110, 115, 116, 130, 143, 160, 162, 167], "coarsest": [6, 19, 36, 55, 77, 119, 139, 148], "revis": [6, 125], "shock": [6, 17, 52, 104, 115], "accord": [6, 57, 97], "criteria": [6, 7, 24, 27, 34, 70, 106], "cluster": [6, 17, 115, 149, 150], "rigoutsi": 6, "bergerrigoutsis91": [6, 17], "nonoverlap": 6, "rectangl": [6, 7, 27, 32, 36, 70, 75, 115, 130, 164], "balanc": [6, 17, 78, 126, 141, 156, 157], "conflict": [6, 30, 62, 66, 71, 107, 111], "goal": 6, "possibl": [6, 13, 24, 28, 30, 32, 34, 36, 37, 47, 49, 51, 52, 55, 64, 65, 66, 75, 82, 86, 94, 97, 99, 100, 104, 109, 111, 115, 140, 142, 143, 148, 149, 162, 166, 167], "minim": [6, 62, 70, 97, 142, 149, 164], "overhead": [6, 76, 115, 161], "cutoff": [6, 150], "control": [6, 7, 25, 27, 34, 36, 44, 47, 58, 62, 64, 71, 77, 84, 87, 92, 94, 96, 97, 98, 99, 101, 115, 125, 130, 141, 151], "fraction": [6, 13, 32, 115, 148, 167, 170], "7": [6, 14, 31, 34, 36, 41, 42, 47, 51, 58, 64, 68, 70, 77, 82, 85, 94, 105, 111, 115, 132, 138, 142, 143, 144, 149, 150], "70": [6, 36, 55], "realli": [6, 72, 116, 167], "At": [6, 13, 29, 30, 36, 38, 39, 42, 70, 99, 104, 108, 110, 115, 130, 148], "present": [6, 26, 63, 72, 94, 97, 102, 103, 104, 109, 153, 154, 167, 170], "previous": [6, 24, 34, 70, 77, 84, 118, 123, 130, 144], "bilinear": [6, 34, 42, 47, 57, 72, 119, 120, 162], "doxygen": [6, 7, 27, 126], "flowchart": [6, 7, 27], "capabl": [7, 12, 19, 24, 34, 36, 47, 52, 56, 64, 70, 78, 89, 96, 119, 124, 125, 127, 128, 129, 130, 131, 135, 136, 164, 166], "block": [7, 32, 35, 42, 63, 75, 77, 78, 88, 97, 106, 109, 116, 167], "structur": [7, 10, 24, 34, 36, 37, 41, 59, 62, 66, 78, 103, 104, 125, 142, 147, 164], "input": [7, 14, 16, 22, 25, 27, 29, 32, 35, 37, 43, 48, 55, 63, 67, 70, 71, 77, 88, 91, 92, 94, 96, 102, 103, 104, 109, 113, 124, 127, 128, 129, 140, 150, 151, 152, 158, 159, 162, 164, 167], "indic": [7, 16, 19, 22, 24, 27, 31, 32, 34, 36, 41, 42, 44, 47, 48, 55, 57, 59, 62, 67, 71, 72, 80, 84, 94, 98, 99, 102, 104, 108, 111, 115, 116, 125, 130, 132, 140, 141, 148, 149, 150, 151, 152, 154, 162, 164, 167], "tool": [7, 8, 17, 24, 25, 30, 32, 34, 35, 36, 37, 38, 39, 42, 48, 49, 50, 51, 52, 55, 57, 60, 61, 62, 63, 71, 75, 80, 81, 82, 83, 85, 96, 111, 114, 120, 121, 125, 126, 130, 131, 151, 153, 162, 164, 166, 168], "matlab": [7, 24, 27, 38, 39, 80, 81, 82, 100, 110, 118, 127, 130, 131], "deprec": [7, 32, 48, 58, 62, 118, 123, 127, 135, 137, 162, 164], "debug": [7, 18, 44, 66, 77, 81, 98, 106, 111, 116, 135, 148, 150], "flag": [7, 12, 13, 18, 24, 27, 30, 31, 41, 43, 44, 48, 56, 62, 76, 89, 107, 109, 111, 118, 123, 128, 132, 150, 151], "sampl": [7, 8, 14, 17, 18, 27, 31, 36, 44, 47, 48, 51, 55, 64, 75, 111, 116, 135, 139, 142, 148, 149, 162, 164, 167], "ghost": [7, 16, 19, 76, 77, 94, 97, 104, 106, 125, 132, 136, 148, 150, 152, 161, 167, 170], "flagregion": [7, 27, 70, 115, 130, 132, 142, 149, 151], "rule": [7, 13, 27, 63, 70, 89], "convex": [7, 34], "slu": 7, "bounding_box": [7, 35], "mask_outsid": [7, 70], "write": [7, 30, 32, 35, 36, 37, 41, 42, 47, 48, 54, 57, 58, 68, 75, 77, 78, 81, 88, 91, 94, 95, 97, 98, 99, 103, 118, 125, 127, 150, 152, 158, 162, 164], "instanti": [7, 91, 99, 101, 104, 106, 136, 150, 152], "make_kml": 7, "simpl": [7, 31, 38, 39, 41, 48, 59, 72, 75, 89, 96, 101, 102, 104, 109, 114, 116, 164], "select": [7, 12, 13, 15, 16, 30, 34, 42, 70, 97, 98, 104, 112, 115, 119, 126, 130, 138, 145, 148, 151, 156, 157, 166], "continent": [7, 70], "shelf": [7, 70], "guid": [7, 13, 17, 20, 25, 26, 27, 48, 50, 56, 61, 96, 110, 115, 118, 126, 130, 135, 136, 137, 155], "adjoint": [7, 17, 27, 56, 115, 127, 128], "gaug": [7, 27, 34, 36, 48, 49, 63, 72, 94, 95, 106, 113, 119, 123, 124, 125, 126, 127, 130, 135, 139, 143, 147, 150], "extend": [8, 16, 24, 42, 63, 70, 71, 94, 127, 142, 144, 151, 162, 164, 170], "directli": [8, 18, 19, 21, 25, 34, 48, 52, 61, 71, 75, 82, 84, 88, 89, 92, 96, 106, 109, 111, 127, 135, 164, 168], "obviou": [8, 55], "elimin": [8, 24, 70, 89, 111, 127, 151], "gallery_classic_amrclaw": 8, "num_cel": [8, 24, 49, 94, 140, 148, 149, 150, 152], "refinement_ratios_i": [8, 149, 150], "sweep": [8, 140], "transvers": [8, 94, 125, 132, 140, 141, 148, 167, 170], "graph": 9, "understand": [9, 27, 38, 39, 52, 81, 96, 108, 115, 140], "filpatch": [9, 42, 125, 129, 132], "idea": [10, 26, 32, 70, 71, 78, 88, 108, 120, 164, 170], "overal": [10, 88], "who": [10, 12, 21, 24, 26, 34, 44, 52, 60, 118], "gori": 10, "monster": 10, "column": [10, 32, 34, 47, 49, 52, 64, 98, 102, 123, 142, 164], "markup": 11, "languag": [11, 81, 109], "restructur": [11, 58], "text": [11, 58, 59, 63, 77, 91, 97, 104, 123], "sphinx": [11, 25, 27, 59, 126], "covert": 11, "convert_readm": 11, "brows": [11, 26, 45, 55, 71, 153, 167], "insert": [11, 16, 75, 97, 118, 146], "script": [11, 21, 22, 30, 32, 34, 36, 43, 47, 55, 58, 66, 71, 78, 81, 86, 89, 93, 95, 96, 98, 99, 104, 109, 111, 116, 127, 131, 140, 147, 151, 152, 164], "invok": [11, 14, 19, 76, 144, 165], "minor": [11, 19, 55, 58, 98, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 130, 132, 134, 136, 137], "syntax": [11, 61, 146], "highlight": [11, 13], "header": [11, 32, 34, 36, 42, 47, 57, 70, 75, 77, 97, 103, 123, 125, 127, 158, 162, 164], "complex": [12, 19, 36, 41, 94], "archiv": [12, 23, 39, 55, 59, 116, 153, 160, 164, 166], "github": [12, 15, 19, 24, 25, 26, 27, 28, 31, 56, 58, 61, 62, 93, 101, 105, 112, 116, 118, 122, 124, 125, 126, 135, 138, 140, 141, 145, 156, 157, 165], "app": [12, 13, 20, 25, 28, 30, 31, 40, 45, 46, 75, 113, 114, 118, 122, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 141], "com": [12, 13, 19, 25, 26, 28, 30, 31, 51, 56, 58, 59, 61, 62, 97, 99, 101, 105, 122, 124, 125, 126, 135, 138, 141], "fvmbook": [12, 17, 45, 46], "galleri": [12, 17, 27, 34, 36, 38, 39, 40, 45, 48, 49, 59, 80, 81, 93, 96, 110, 116, 122, 126, 153, 160, 167], "anim": [12, 16, 36, 45, 49, 55, 123, 130, 131, 135, 153], "instal": [12, 13, 19, 20, 25, 27, 31, 38, 46, 55, 58, 59, 84, 86, 87, 90, 95, 97, 108, 110, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 146, 169], "collect": [12, 27, 28, 30, 32, 34, 75, 81, 88, 104, 153], "either": [12, 16, 19, 22, 32, 34, 36, 42, 48, 50, 55, 64, 66, 70, 71, 75, 77, 82, 84, 88, 94, 96, 97, 98, 104, 109, 111, 115, 116, 123, 124, 125, 127, 135, 140, 142, 144, 149, 151, 158, 162, 164, 167, 170], "clone": [12, 20, 25, 26, 45, 56, 58, 59, 62, 85, 99, 105, 114, 118, 135, 136, 137, 165], "git": [12, 13, 25, 26, 27, 28, 56, 59, 62, 96, 105, 116, 129], "navig": [12, 31, 58, 153], "green": [12, 18, 19, 63, 70, 75, 82, 116, 164], "button": [12, 13, 30, 55, 63, 126], "download": [12, 13, 30, 31, 32, 39, 40, 42, 48, 55, 59, 61, 62, 93, 99, 105, 127, 128, 138, 160, 164, 165, 166], "zip": [12, 55, 59], "illustr": [12, 27, 32, 34, 38, 46, 48, 49, 55, 70, 71, 75, 77, 114, 122, 123, 127, 129, 140, 142, 153, 154, 164], "variou": [12, 19, 22, 24, 32, 36, 41, 46, 52, 58, 71, 72, 75, 82, 84, 94, 108, 110, 111, 115, 125, 140, 147, 151, 154, 158], "visibl": [12, 13, 46, 55, 114, 153], "render": [12, 24, 34, 46, 55, 63, 168], "advantag": [12, 19, 36, 47, 64, 81, 97, 110, 116, 142], "independ": [12, 25, 32, 36, 37], "contact": [12, 93, 96, 105], "u": [12, 13, 16, 26, 31, 34, 36, 37, 51, 52, 59, 60, 62, 64, 86, 93, 96, 102, 105, 106, 107, 108, 113, 126, 140, 149, 152, 158, 166], "storm": [12, 17, 26, 27, 48, 123, 126, 127, 128, 129, 131, 132, 133], "surg": [12, 17, 26, 27, 48, 123, 126, 127, 128, 129, 132, 158], "empti": [12, 36, 47, 103, 106, 109, 111, 118, 148, 151, 158, 164], "gitmodul": 12, "pull": [12, 26, 28, 31, 58, 59, 61, 93, 101, 116, 122, 125, 126, 132, 135, 140], "request": [12, 26, 28, 32, 36, 37, 47, 58, 61, 77, 88, 93, 94, 98, 101, 103, 116, 118, 125, 127, 132, 140, 151, 158, 164], "init": [12, 27, 30, 42, 48, 56, 59, 61, 143, 151], "leav": [12, 13, 16, 47, 62, 149, 164], "off": [12, 13, 47, 52, 55, 63, 71, 84, 91, 98, 115, 135, 149, 164], "won": [12, 13, 70, 89, 164], "hurt": [12, 67], "maintain": [12, 30, 110, 127, 149, 162, 167], "flavor": [12, 23, 97], "demonstr": [12, 27, 93, 99], "agre": [12, 30, 42, 57, 140, 161, 164, 167], "seen": [12, 24, 34, 38, 39, 40, 52, 76, 101, 148, 153], "cloud": 13, "elast": [13, 75], "sign": [13, 26, 82, 132, 158], "account": [13, 26, 30, 59, 90, 99, 139], "750": 13, "free": [13, 55, 66, 75, 86, 90, 101, 105, 107], "micro": 13, "suffici": [13, 16, 18, 19, 22, 36, 47, 75, 76, 77, 113, 119, 135, 148, 151], "tier": 13, "inform": [13, 14, 24, 27, 34, 35, 37, 38, 39, 49, 50, 51, 52, 53, 54, 62, 67, 77, 82, 83, 84, 88, 89, 94, 96, 98, 99, 100, 102, 103, 109, 111, 124, 127, 128, 130, 136, 138, 139, 140, 143, 146, 148, 149, 151, 158, 161, 162, 165, 166, 167, 168], "uw": [13, 26], "escienc": 13, "aw": 13, "tutori": [13, 31, 59, 84, 87, 91, 96, 105, 111, 114], "gear": 13, "faq": [13, 27, 81], "price": 13, "charg": 13, "per": [13, 32, 37, 47, 49, 55, 63, 71, 76, 97, 149], "thereof": 13, "regardless": [13, 37, 42, 70, 115, 148], "cpu": [13, 56, 124, 127, 129, 161], "consol": [13, 98, 151], "tab": [13, 58, 138], "east": [13, 162], "cheaper": 13, "rate": 13, "menu": [13, 20, 27, 58, 63, 118, 126, 135, 136, 137, 138, 143, 166], "imag": [13, 38, 39, 42, 59, 63, 70, 116, 127, 142], "platform": [13, 55, 91, 99, 110, 116], "finish": [13, 82, 88], "load": [13, 63, 98, 100, 103, 109, 116, 164, 168], "databas": [13, 32, 75, 109, 113, 127, 162], "uwamath": 13, "bar": [13, 58, 158], "screen": [13, 30, 55, 63, 91, 98, 99, 124, 150, 152], "shapshot": 13, "machin": [13, 27, 76, 78, 116, 125, 146], "disk": [13, 47, 88, 97, 98, 116, 125], "ubuntu": 13, "linux": [13, 74, 85, 107, 116, 146], "popup": 13, "look": [13, 14, 24, 27, 30, 32, 42, 55, 58, 59, 63, 71, 82, 84, 89, 94, 99, 103, 104, 108, 109, 111, 116, 120, 127, 136, 142, 148, 149, 151, 161, 164, 165], "sort": [13, 42, 127, 147, 165], "larger": [13, 22, 34, 49, 55, 63, 75, 76, 77, 82, 94, 119, 125, 132, 149, 151, 162], "cost": [13, 104], "continu": [13, 24, 30, 32, 51, 53, 58, 86, 110, 118, 140, 148, 170], "eventu": [13, 48, 130], "don": [13, 29, 30, 58, 59, 82, 97, 98, 99, 105, 116, 150, 165], "pair": [13, 51, 97, 116, 164], "secur": 13, "quick": [13, 27, 39, 48, 50, 60, 85, 116, 160], "close": [13, 42, 55, 58, 63, 70, 71, 97, 115, 118, 130, 149, 158], "back": [13, 29, 31, 58, 59, 126], "statu": [13, 30, 54, 91, 108], "wait": 13, "until": [13, 34, 64, 70, 137, 144], "refresh": [13, 47], "bottom": [13, 15, 19, 32, 38, 39, 48, 52, 68, 70, 75, 88, 101, 102, 125, 126, 145, 156, 157], "scroll": 13, "down": [13, 32, 98, 124, 158, 162, 164], "dn": 13, "screenshot": [13, 55], "rjlkei": 13, "pem": 13, "abl": [13, 58, 111], "ssh": [13, 30], "keypair": 13, "50": [13, 17, 34, 51, 55, 72, 104, 120, 150], "19": [13, 17, 26, 133, 134, 138, 161], "75": [13, 17, 92, 108, 142], "229": 13, "amazonaw": 13, "gfortran": [13, 62, 76, 85, 87, 107, 118, 146, 165], "ipython": [13, 78, 82, 84, 89, 90, 96, 98, 105, 108, 111, 123, 124], "scipi": [13, 37, 89, 110, 137, 158, 164], "netcdf": [13, 37, 44, 48, 124, 127, 129, 131, 158, 164, 166], "apach": 13, "server": [13, 31, 42, 55, 58, 59, 70, 127, 162, 166], "apt": [13, 85], "fetch": [13, 51], "bring": [13, 55, 58, 71, 151], "master": [13, 15, 27, 31, 58, 59, 62, 101, 112, 118, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 141, 145, 156, 157], "make_lib": 13, "compil": [13, 18, 19, 27, 38, 39, 43, 50, 62, 67, 76, 78, 84, 85, 89, 96, 97, 101, 105, 109, 118, 119, 140, 141, 146], "bashrc": [13, 44, 107, 146], "Of": [13, 28, 75, 108, 113, 162], "cours": [13, 28, 34, 47, 50, 64, 75, 99, 100, 108, 110, 113, 151, 162], "tar": [13, 129, 138], "instruct": [13, 19, 20, 26, 27, 38, 39, 42, 55, 56, 58, 59, 88, 90, 96, 99, 105, 108, 111, 118, 126, 133, 135, 136, 137, 138, 139, 165], "window": [13, 32, 71, 84, 146], "respons": [13, 52, 88, 103], "pretti": 13, "slow": [13, 55, 98, 107], "_plot": [13, 38, 39, 47, 71, 84, 118, 147, 153], "local": [13, 17, 19, 22, 27, 30, 55, 58, 63, 66, 67, 71, 92, 94, 101, 106, 125, 127, 136, 144, 162, 164, 167], "sftp": 13, "much": [13, 19, 30, 34, 36, 44, 49, 55, 77, 78, 81, 85, 110, 115, 119, 123, 130, 135, 136, 142, 148, 151, 161, 164], "smaller": [13, 36, 55, 68, 78, 94, 98, 119, 135, 144, 148, 150, 151, 152, 164], "quicker": [13, 142], "browser": [13, 30, 31, 38, 39, 55, 58, 153], "explain": [13, 19, 34, 52, 70, 132, 148, 153], "webserv": 13, "inbound": 13, "port": [13, 31, 95, 96, 101, 149], "22": [13, 26, 149, 164], "80": [13, 17, 55, 99, 142], "drop": [13, 18, 19, 58, 85, 130, 132, 144, 148], "tcp": 13, "Then": [13, 16, 30, 31, 32, 36, 47, 58, 59, 60, 67, 70, 75, 76, 84, 88, 91, 99, 105, 106, 107, 111, 118, 140, 142, 164, 165], "someth": [13, 29, 30, 58, 66, 74, 81, 98, 103, 104, 111, 118, 162, 165, 167], "shot": 13, "ln": 13, "expos": [13, 78], "home": [13, 31, 32, 62, 146], "scp": 13, "TO": [13, 65, 86], "send": [13, 26, 101, 140], "remot": [13, 55, 59, 127, 164, 166], "rel": [13, 18, 19, 22, 32, 43, 50, 52, 55, 75, 76, 82, 96, 109, 111, 116, 118, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 143, 149, 151, 153, 162, 166], "end": [13, 31, 32, 34, 35, 36, 47, 51, 55, 59, 63, 91, 98, 102, 108, 110, 113, 115, 118, 124, 125, 127, 139, 141, 142, 150, 152, 158, 161], "retriev": [13, 37, 51, 84, 89, 104, 164, 166], "sit": 13, "idl": 13, "action": [13, 14, 89], "restart": [13, 27, 47, 77, 84, 96, 118, 124, 125, 126, 127, 129, 132, 136, 148, 150, 152], "later": [13, 36, 37, 42, 54, 55, 62, 84, 104, 139], "But": [13, 19, 34, 42, 55, 72, 82, 107, 120, 127, 144, 146], "futur": [13, 24, 27, 28, 38, 39, 42, 49, 52, 57, 63, 68, 88, 104, 110, 124, 125, 127, 130, 136, 149, 158, 162], "job": [13, 134], "eb": 13, "runclaw": [14, 54, 118, 120, 129, 131, 137, 140], "autom": [14, 58, 89, 116], "certain": [14, 34, 48, 61, 70, 98, 115, 124, 142, 148], "keep": [14, 27, 30, 34, 35, 37, 38, 39, 76, 88, 91, 96, 106, 109, 116, 120], "log": [14, 27, 30, 31, 94, 95, 96, 103, 104], "came": 14, "rundir": [14, 91], "environ": [14, 18, 19, 27, 30, 38, 39, 40, 43, 54, 55, 58, 61, 62, 71, 74, 76, 78, 100, 107, 109, 111, 125, 164, 165], "noth": [15, 64, 106, 128, 145, 156, 157, 164, 167], "rememb": [15, 29, 76, 82, 99, 145, 156, 157], "b4step1": [15, 67, 167], "b4step2": [15, 145, 167], "b4step3": 15, "branch": [15, 20, 27, 31, 44, 54, 56, 59, 61, 62, 112, 116, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 145, 156, 157], "tag": [15, 55, 59, 61, 112, 145, 149, 150, 156, 157], "bathymetri": [15, 48, 52, 55, 63, 102, 113, 125, 127, 141, 143, 145, 151, 162, 164], "area": [15, 24, 48, 104, 113, 125, 144, 145], "dy": [15, 51, 57, 63, 64, 77, 89, 94, 98, 123, 127, 145, 162, 164], "capac": [15, 102, 145, 148, 149, 150, 152], "length": [15, 32, 37, 49, 52, 63, 75, 101, 106, 125, 132, 145, 148, 149, 150, 151, 167], "latter": [15, 18, 47, 70, 72, 101, 130, 142, 145, 148, 158, 167], "quantiti": [15, 18, 19, 34, 37, 63, 71, 72, 91, 95, 96, 102, 106, 141, 145, 151], "coordinate_system": [15, 18, 49, 64, 145, 151], "impos": [16, 89, 115, 156, 157, 170], "chapter": [16, 140, 148, 167], "choic": [16, 48, 81, 104, 148, 150, 151, 152, 167], "bc_lower": [16, 88, 101, 108, 148, 150, 152], "bc_upper": [16, 88, 101, 108, 148, 150, 152], "extrap": [16, 101, 108, 148, 150], "outflow": [16, 148, 150, 152], "move": [16, 34, 38, 39, 48, 58, 62, 64, 75, 101, 115, 119, 121, 126, 151, 154, 162, 163], "normal": [16, 19, 35, 36, 56, 58, 64, 82, 101, 111, 140, 141, 148, 149, 150, 151, 152], "fairli": [16, 52, 125], "good": [16, 19, 30, 52, 55, 65, 76, 86, 108, 113, 116, 125, 132, 140], "outgo": 16, "let": [16, 48, 62, 86, 113, 126, 132, 140], "without": [16, 24, 35, 43, 47, 52, 63, 65, 66, 67, 70, 71, 82, 84, 86, 92, 96, 97, 98, 109, 111, 116, 136, 142, 146, 150, 152, 158, 165, 167], "particularli": [16, 19, 29, 31, 34, 36, 54, 55, 60, 61, 62, 75, 77, 111, 120, 123, 127, 132, 136, 144, 162], "perfect": 16, "hit": [16, 17, 36, 71, 77, 84, 98, 148], "obliqu": 16, "perfectli": 16, "wall": [16, 44, 101, 108, 124, 127, 129, 148, 150, 152, 161], "veloc": [16, 34, 36, 51, 64, 71, 84, 101, 102, 108, 125, 135, 143, 148, 149, 150, 151, 152, 167], "momentum": [16, 18, 34, 36, 37, 52, 64, 68, 98, 132, 141, 151, 154, 162], "third": [16, 18, 19, 34, 57, 92, 161, 164], "acoust": [16, 31, 38, 39, 52, 87, 88, 91, 93, 96, 104, 105, 123, 140, 150, 167], "p": [16, 17, 31, 84, 86, 88, 94, 97, 98, 102, 106, 118, 140, 170], "hu": [16, 18, 19, 36, 37, 64, 68, 102, 141, 151], "hv": [16, 19, 36, 37, 64, 68, 141, 151], "equal": [16, 19, 32, 34, 35, 36, 37, 49, 51, 55, 72, 75, 77, 99, 101, 115, 139, 142, 148, 150, 152, 162, 164], "far": [16, 18, 19, 41, 45, 70, 81, 128, 130, 132, 135], "symmetri": [16, 49], "physic": [16, 19, 47, 49, 55, 89, 94, 96, 108, 115, 170], "slightli": [16, 19, 42, 57, 125, 126, 132, 142], "complic": [16, 82, 89, 142, 147], "alwai": [16, 19, 24, 28, 29, 30, 34, 36, 37, 44, 57, 58, 62, 71, 88, 97, 114, 115, 119, 120, 132, 136, 144, 148, 150, 152, 162, 167], "alon": [16, 55], "topographi": [16, 17, 19, 27, 34, 35, 36, 37, 47, 48, 49, 52, 57, 63, 68, 72, 75, 83, 113, 114, 118, 119, 120, 121, 123, 124, 127, 130, 133, 136, 142, 143, 144, 156, 157, 163], "artifici": [16, 144], "ignor": [16, 49, 55, 63, 97, 123, 132, 143, 164], "incom": 16, "truncat": [16, 36, 77, 97, 148], "spuriou": [16, 34, 116], "extropl": 16, "dry": [16, 17, 27, 34, 48, 102, 130, 133, 141, 144], "land": [16, 42, 48, 50, 55, 58, 59, 63, 70, 72, 83, 130, 144, 151, 164], "tank": [16, 49, 52], "bc2amr": [16, 127], "calhounhelzellevequ": 16, "envis": 16, "fold": 16, "piec": [16, 52, 94], "glu": 16, "inflat": 16, "websit": [16, 55, 58, 97, 153, 164], "bergercalhounhelzellevequ": 16, "hint": [16, 27, 48, 81, 84, 111, 151, 165], "suppos": [16, 67, 70, 71, 82, 111, 115], "bit": [16, 24, 32, 59, 97, 99, 107, 141], "examin": [16, 38, 39, 47, 70, 111, 135], "own": [16, 22, 26, 30, 36, 62, 88, 89, 95, 96, 105, 106, 113, 115, 127, 140, 153], "todo": [16, 140, 158, 164, 170], "poster": 17, "resourc": [17, 26, 30, 50, 110], "bale": 17, "rossmanith": 17, "siam": [17, 26, 27, 96, 140], "sci": 17, "24": [17, 55, 72, 142], "2002": 17, "955": [17, 142], "978": 17, "author": [17, 27, 48, 52, 92, 96, 97, 102, 114], "1989": 17, "hydrodynam": 17, "phy": 17, "82": 17, "64": [17, 94, 97, 99, 107], "84": [17, 55], "34": [17, 55, 63, 96], "2011": [17, 26, 86], "pp": 17, "1195": 17, "1206": 17, "adv": 17, "awr11": 17, "1998": 17, "anal": 17, "35": [17, 34, 57, 75, 96], "2298": 17, "2316": 17, "bergerleveque2023": [17, 18, 19, 49], "2023": [17, 45, 118, 136, 137, 138], "implicit": [17, 19, 86, 104], "dispers": [17, 18, 48, 49, 52], "submit": 17, "1984": 17, "partial": [17, 78, 113], "differenti": [17, 32], "53": 17, "484": 17, "512": 17, "rigoutso": 17, "1991": 17, "ieee": 17, "tran": 17, "sy": [17, 42, 70, 91, 150, 152], "man": [17, 27, 48, 52, 151, 156, 157], "cyber": 17, "21": [17, 71, 92, 94, 123, 124, 138], "1278": 17, "1286": 17, "2018": [17, 26, 58, 127, 128, 138], "phd": 17, "thesi": [17, 104], "pure": [17, 56, 84, 94, 96, 97, 99, 104, 116, 141], "appl": 17, "geophi": 17, "173": 17, "4055": 17, "4074": 17, "info": [17, 31, 32, 35, 36, 37, 47, 59, 63, 71, 91, 94, 97, 98, 104, 125, 135, 149, 150, 158], "analysi": 17, "evalu": [17, 29, 32, 36, 37, 68, 72, 88, 94, 104, 164, 167], "preprint": 17, "2000": [17, 57, 162, 164], "165": [17, 161], "126": [17, 164], "166": 17, "leveque96": 17, "1996": 17, "advect": [17, 82, 96, 99, 140, 141, 152, 167], "incompress": 17, "leveque1996": 17, "33": [17, 94, 142], "627": 17, "665": 17, "1997": [17, 96], "multi": [17, 55, 88, 119, 121, 124, 127, 167], "131": [17, 96], "327": [17, 96], "353": [17, 96], "wpalg": 17, "cambridg": 17, "press": [17, 99, 105], "uk": [17, 32], "fvmhp_materi": 17, "acta": 17, "numerica": 17, "211": 17, "289": 17, "dg": 17, "actanum2011": 17, "techniqu": [17, 28], "2013": [17, 26, 96], "a351": [17, 96], "a377": [17, 96], "manuel": [17, 86, 96], "quezada": [17, 86, 96], "luna": [17, 86, 96], "matthew": [17, 86, 96], "kneplei": [17, 86, 96], "emmett": [17, 86, 96], "2012": [17, 24, 26, 52, 96], "scalabl": [17, 96], "c210": [17, 96], "c231": [17, 96], "sisc": [17, 96], "month": [17, 55, 96], "nov": [17, 96], "kimetal2017": [17, 19], "kim": [17, 19], "pedersen": 17, "lovholt": 17, "boussinesq": [17, 27, 48, 49, 52, 118, 137], "studi": [17, 19, 52, 68], "break": [17, 18, 30, 32, 48, 52, 55, 63, 75, 116, 124, 144, 151, 164], "phenomena": [17, 19], "long": [17, 18, 19, 30, 32, 49, 51, 52, 55, 63, 74, 96, 124, 132, 149, 164], "coastal": [17, 52, 130, 143, 144, 151, 162], "engin": [17, 55], "122": [17, 42, 70, 142, 164], "2017": [17, 26, 59, 102, 125, 126, 127, 138], "86": 17, "1016": 17, "coastaleng": 17, "005": 17, "kim201775": 17, "jihwan": [17, 19], "geir": 17, "finn": 17, "vholt": 17, "mandlietal2016": 17, "googl": [17, 26, 27, 30, 42, 48, 51, 63, 70, 93, 97, 99, 107, 123, 125, 133, 140, 142], "scholar": 17, "hundr": [17, 36], "calhellev08": 17, "helzel": 17, "circular": 17, "spheric": [17, 49, 55, 118, 137], "review": [17, 92], "2008": [17, 86, 92, 102], "723": 17, "752": 17, "leveque09": 17, "reproduc": [17, 57, 65, 86], "cise": 17, "11": [17, 34, 82, 102, 131, 132, 138], "2009": [17, 92, 97, 102], "27": [17, 55, 63, 72, 142], "levyon03": 17, "darryl": 17, "yong": 17, "solitari": 17, "layer": [17, 27, 47, 63, 94, 119, 121, 124, 125, 127], "media": 17, "math": [17, 51, 55, 108], "63": [17, 142], "2003": 17, "1539": 17, "1560": 17, "mandli13a": 17, "72": [17, 55, 75], "91": 17, "2013it": 17, "aug": [17, 128], "mandli13b": 17, "dawson": 17, "36": [17, 51, 77, 94], "2014": [17, 26, 102, 117, 119, 120, 121, 122, 123, 138], "clint": 17, "okada85": [17, 32, 75], "okada": [17, 27, 32, 48, 49, 114, 162, 166], "deform": [17, 32, 35, 37, 48, 75, 166], "due": [17, 26, 32, 42, 51, 75, 116, 126, 127, 132, 144, 154, 165], "shear": [17, 32], "tensil": 17, "fault": [17, 27, 32, 48, 49, 114, 127, 134, 162, 166], "bull": [17, 32], "seism": [17, 32], "soc": [17, 32], "am": [17, 32], "1985": [17, 32], "1135": 17, "1154": 17, "repositori": [18, 19, 24, 26, 27, 28, 31, 39, 40, 45, 46, 48, 49, 56, 61, 62, 66, 67, 96, 104, 111, 113, 114, 116, 122, 125, 138, 155], "literatur": [18, 19, 52, 140], "situat": [18, 19, 49, 55, 70, 71, 132], "wavelength": [18, 19, 49, 52], "fluid": [18, 19, 34, 36, 49, 52, 64, 72, 118, 143], "swe": [18, 48], "deriv": [18, 19, 65, 75, 86, 91, 95, 96, 106, 116], "longer": [18, 19, 22, 30, 47, 58, 59, 63, 85, 110, 125, 127, 130, 132, 136, 137, 139, 140, 151, 162, 166], "respect": [18, 32, 34, 49, 55, 63, 96, 97, 102, 164], "txx": 18, "altern": [18, 19, 32, 35, 36, 38, 39, 47, 48, 51, 55, 60, 66, 71, 81, 96, 99, 111, 115, 118, 123, 124, 125], "ellipt": [18, 19], "involv": [18, 19, 26, 101, 104, 113, 154, 159], "xx": [18, 118], "tridiagon": 18, "sgn": [18, 48], "serr": [18, 19], "naghdi": [18, 19], "madsen": [18, 48], "sorensen": [18, 48], "properti": [18, 32, 37, 49, 64, 71, 88, 91, 94, 103, 106, 164], "less": [18, 19, 42, 52, 55, 64, 68, 76, 104, 115, 116, 132, 148], "stabl": [18, 19, 85, 94, 132], "plane": [18, 32, 49, 75, 124, 142, 166], "planar": [18, 49, 75, 140, 141], "axisymmetr": [18, 49], "sphere": [18, 27, 32, 48, 49, 51, 89, 118, 120, 136, 137, 141, 151], "topo": [18, 27, 34, 35, 42, 48, 49, 52, 55, 57, 63, 70, 72, 83, 111, 118, 119, 121, 127, 129, 132, 136, 143, 151, 162, 164], "dtopo": [18, 27, 32, 35, 48, 52, 57, 63, 75, 111, 119, 121, 122, 130, 132, 144, 151, 162, 164, 166], "ident": [18, 42, 67, 94, 97, 99, 116, 164], "bouss_": 18, "templat": [18, 89], "bouss": [18, 19, 49, 118], "lapack": [18, 19, 118, 119], "fflag": [18, 19, 30, 43, 66, 76, 89, 109, 162], "llapack": [18, 107], "lbla": [18, 107], "explicit": [18, 109, 149], "lapack_tridiag": 18, "soubroutin": 18, "bla": [18, 19, 118], "bouss_wavetank_matsuyama": 18, "openmp": [18, 24, 27, 44, 78, 109, 115, 124, 130, 161], "somewher": [18, 19, 123], "boussdata1d": 18, "add_data": [18, 19], "bouss_data": [18, 19], "deepbouss": 18, "switch": [18, 31, 48, 55, 62, 101, 111, 116, 118, 126, 143, 166], "bouss_equ": [18, 19], "alpha": [18, 19, 55, 59, 104], "153": [18, 19], "hardwir": [18, 19, 76], "bouss_modul": [18, 19], "tip": [18, 19, 26, 48, 62, 81, 95, 96, 101, 110], "similarli": [18, 36, 43, 56, 93, 99, 101, 142, 161], "bparam": [18, 19], "15": [18, 19, 34, 42, 57, 59, 63, 70, 75, 94, 142, 150, 161, 164], "caus": [18, 19, 24, 36, 52, 55, 58, 65, 66, 72, 78, 84, 86, 107, 116, 124, 125, 126, 128, 132, 147, 149, 162, 164], "revert": [18, 19, 55], "nondispers": [18, 19], "bouss_min_depth": [18, 19], "criterion": [18, 19, 34, 115, 150], "onshor": [18, 19, 34, 49, 63, 68, 70, 142, 144], "nearest": [18, 19, 37, 42, 47, 164], "omit": [18, 19, 62, 116, 118, 125, 139, 151], "unknown": [18, 19, 32, 106], "inund": [18, 19, 34, 48, 49, 55, 68, 115, 130, 143, 166], "shore": [18, 19, 36, 42, 48, 115, 130, 144], "simplest": [18, 19, 62, 74, 108], "known": [19, 34, 44, 71, 75, 76, 82, 105, 107, 116, 126, 148], "landslid": [19, 52], "realist": [19, 55], "test": [19, 24, 27, 32, 38, 41, 44, 54, 55, 59, 60, 61, 62, 68, 81, 86, 87, 89, 95, 96, 102, 109, 110, 115, 120, 124, 125, 126, 127, 130, 132, 136, 140, 152, 158, 161, 162, 164], "One": [19, 25, 27, 28, 32, 34, 47, 48, 55, 58, 64, 70, 71, 72, 89, 109, 115, 118, 123, 164], "momenta": [19, 64], "effici": [19, 52, 56, 86, 96, 97, 98, 106, 115, 142, 149], "consider": [19, 52, 88], "oper": [19, 53, 116, 125], "spars": [19, 118], "huc": 19, "hvc": 19, "expand": [19, 28, 42, 55, 63], "petsc": [19, 24, 25, 78, 86, 88, 95, 98, 105, 106, 107, 109, 118], "mpi": [19, 78, 99, 118], "prerequesit": 19, "simplic": 19, "practic": [19, 30, 111, 113, 154], "variant": [19, 22, 60, 109, 116, 118], "tune": [19, 28, 149], "match": [19, 32, 36, 41, 55, 63, 97, 103, 116, 158, 164], "airi": 19, "theori": [19, 65, 86, 170], "incorpor": [19, 24, 52, 58, 86, 104, 119, 126, 141, 164], "bonneton": 19, "et": 19, "al": 19, "histor": [19, 52, 75, 166], "boussclaw": 19, "successfulli": [19, 66, 103], "reveal": [19, 47, 108], "stabil": [19, 104, 132, 148], "report": [19, 26, 32, 34, 54, 111, 116, 124, 127, 146, 148, 150], "except": [19, 24, 29, 32, 42, 49, 97, 102, 109, 130, 137, 148, 151, 158, 162], "investig": [19, 116], "radial_flat": 19, "num_eqn": [19, 77, 88, 89, 92, 97, 99, 101, 102, 103, 106, 108, 140, 148, 150, 152, 167], "facilit": [19, 47, 64, 96, 116, 123, 125, 130, 136, 153, 158], "boussdata": 19, "bouss_min_level": 19, "bouss_max_level": 19, "bouss_solv": 19, "bouss_tstart": 19, "avoid": [19, 42, 55, 58, 63, 66, 71, 94, 98, 115, 118, 119, 120, 124, 125, 132, 134, 139, 148, 151, 170], "altogeth": 19, "neighborhood": 19, "recogn": [19, 50, 57, 62, 162], "extrem": [19, 55, 107], "motion": [19, 75, 162], "did": [19, 127, 132, 142, 162], "petsc_dir": [19, 99], "petsc_arch": [19, 99], "shell": [19, 30, 61, 62, 76, 82, 84, 99, 105, 108, 111, 125, 146], "dhave_petsc": 19, "petsc_opt": 19, "options_fil": 19, "petscmpiopt": 19, "adequ": [19, 52], "briefli": [19, 170], "gmre": 19, "krylov": 19, "algebra": 19, "multigrid": 19, "precondition": 19, "manualpag": 19, "ksp": 19, "kspsetfromopt": 19, "pc": 19, "pcsetfromopt": 19, "ex": [19, 38, 39, 91, 118], "xgeoclaw": 19, "runex": [19, 118], "bin": [19, 47, 99, 139], "mpiexec": [19, 99], "word": [19, 98, 127, 158], "process": [19, 27, 36, 38, 39, 48, 55, 56, 75, 88, 93, 94, 99, 105, 106, 109, 116, 118, 125, 135, 137, 148, 165], "incorrectli": [19, 124], "configur": [19, 82, 88, 99, 164], "environment": 19, "implicitamr": 19, "accompani": [19, 20, 23, 118, 135, 136, 137], "march": [20, 26, 27, 34, 41, 42, 48, 119, 120, 138, 142], "29": [20, 138], "featur": [20, 24, 27, 30, 34, 42, 55, 58, 71, 82, 89, 115, 116, 118, 122, 124, 125, 127, 132, 135, 136, 137, 138, 158, 162], "dev": [20, 26, 30, 58, 59, 99, 118, 127, 128, 133, 134, 135, 136, 137, 138], "diff": [20, 54, 59, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "tarfil": [20, 59, 62, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "pip": [20, 27, 30, 55, 59, 60, 90, 96, 99, 105, 107, 111, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 146], "doc": [20, 25, 26, 30, 32, 55, 59, 92, 109, 110, 111, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 155], "docker": [20, 27, 59, 60, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 169], "migrat": 21, "intermedi": [21, 34, 37, 75, 139, 167], "easiest": [21, 30, 44, 78, 82, 84, 115, 167], "bulk": [21, 88, 102, 108, 140, 150, 167], "convers": [21, 27, 89, 97, 115, 142, 162, 166], "convert43to46": 21, "inspect": [21, 22, 55], "broken": [21, 22, 30, 75, 116], "renam": [22, 24, 38, 39, 66, 101, 104], "achiev": [22, 89, 156, 157], "convert46to50": 22, "_4": 22, "complet": [22, 24, 30, 51, 66, 84, 88, 89, 99, 109, 116, 137], "delet": [22, 30, 58, 62, 137], "combin": [22, 58, 63, 124, 166], "properli": [22, 34, 38, 39, 42, 43, 52, 55, 57, 58, 62, 63, 70, 74, 77, 91, 116, 119, 122, 127, 130, 132, 146, 148, 151, 154, 162, 164, 165, 167], "permut": 22, "th": [22, 24, 47, 140, 167], "reorder": [22, 24], "pattern": [22, 50, 55, 143], "carefulli": [22, 24, 68], "setaux": [22, 24, 67, 89, 119, 120, 140, 148, 150, 152], "sequenc": [22, 24, 36, 37, 67, 70, 72, 99, 105, 108, 109, 116, 119, 126, 140, 167], "maxmx": [22, 89], "maxmi": [22, 89], "maxmz": 22, "declar": [22, 24, 106, 132, 167], "memori": [22, 24, 76, 77, 78, 88, 91, 98, 106, 132, 149, 150], "alloc": [22, 104, 123, 132, 149], "mx": [22, 24, 49, 57, 77, 89, 99, 102, 140, 150, 162, 167], "resp": [22, 32, 132], "mz": [22, 24], "driver": [22, 67], "led": [22, 128], "homepag": [23, 27], "reorgan": [24, 89, 117, 133], "changelog": [24, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 138], "concern": [24, 48, 149], "evolv": [24, 88, 91, 104], "organ": [24, 25, 38, 39, 91], "affect": [24, 66, 125, 126, 132, 135, 137, 148, 162, 165], "assist": [24, 130], "older": [24, 44, 56, 58, 61, 62, 104, 118, 131, 135, 138, 149], "compris": [24, 96, 164], "webpag": [24, 26, 38, 39, 45, 50, 55, 59, 66, 128, 143], "primari": [24, 30, 31, 48, 113, 116, 158], "auxiliari": [24, 89, 91, 97, 102, 103, 104, 106, 140, 148, 150, 152, 167], "cach": [24, 51, 59, 84, 86, 130, 149], "stride": [24, 164], "contingu": 24, "maux": [24, 140, 167], "ma": [24, 36, 42, 70, 142, 164], "relev": [24, 29, 42, 44, 48, 55, 58, 97, 115, 116, 158], "flexibl": [24, 32, 63, 89, 123, 126, 140, 142, 149], "clean": [24, 58, 59, 109, 118, 123, 127, 137], "systemat": 24, "obscur": 24, "clarifi": 24, "regress": [24, 27, 30, 54, 96, 99, 125, 126, 160], "travi": [24, 132], "miss": [24, 27, 97, 118, 129, 136, 137, 154, 158, 162, 164, 165], "conform": [24, 30, 35, 103, 127, 162], "construct": [24, 32, 34, 57, 72, 88, 94, 109, 136, 158, 159, 162], "visit": [24, 27, 81, 138], "gui": [24, 168], "monitor": [24, 27, 35, 36, 41, 48, 70, 72, 76, 120, 122, 125, 135], "arriv": [24, 34, 36, 42, 48, 125, 143, 144], "fgmax": [24, 27, 36, 41, 48, 63, 72, 76, 120, 122, 125, 126, 130, 131, 135, 136, 137, 151], "ndim": [24, 77, 84, 148, 149], "num_dim": [24, 41, 94, 97, 101, 148, 149, 150, 152], "zlower": 24, "yupper": [24, 150, 164], "zupper": 24, "upper": [24, 34, 35, 41, 49, 92, 94, 101, 142, 148, 150, 152, 162, 164], "mxnest": 24, "neg": [24, 42, 144, 151, 162, 164], "ins": 24, "forc": [24, 27, 43, 48, 66, 70, 109, 115, 130, 141, 144, 149, 159, 164, 165], "prohibit": 24, "again": [24, 43, 66, 70, 75, 82, 84, 88, 89, 98, 102, 107, 111, 127, 133, 162, 165], "2d_grid": 24, "attirbut": 24, "gridlines_show": 24, "grideges_show": 24, "openli": 25, "super": [25, 30, 127, 164], "util": [25, 27, 30, 37, 48, 55, 77, 81, 84, 96, 111, 116, 118, 147, 163, 164, 165], "graphic": [25, 30, 56, 71, 81, 135], "visual": [25, 26, 30, 36, 38, 39, 47, 48, 61, 62, 71, 77, 78, 81, 96, 100, 101, 111, 118, 123, 130, 168], "web": [25, 27, 30, 38, 39, 55, 58, 59, 127, 153, 164], "latest": [25, 27, 46, 55, 58, 59, 61, 62, 90, 99, 105, 118, 120, 124], "legaci": [25, 59, 62], "welcom": [26, 86], "answer": 26, "question": [26, 30, 51, 103], "slack": 26, "channel": [26, 45], "workspac": [26, 71, 106], "join": [26, 82], "experi": [26, 52, 104, 137, 154], "warn": [26, 30, 97, 98, 104, 118, 132, 148, 165], "activ": [26, 34, 36, 41, 58, 104, 113, 151], "gitter": 26, "post": [26, 27, 28, 30, 36, 55, 99, 133, 134, 135, 148, 153], "ask": 26, "twitter": 26, "rais": [26, 32, 62, 97, 103, 105, 109, 158, 164], "photo": [26, 27], "ve": [26, 90, 105, 108], "fork": [26, 58, 59], "track": [26, 27, 30, 34, 35, 36, 47, 48, 55, 58, 60, 62, 76, 88, 96, 109, 116, 119, 128, 130, 133, 135, 141, 158], "youtub": [26, 113, 130], "video": [26, 113, 130], "introductori": 26, "webinar": 26, "csdm": 26, "2019": [26, 56, 128, 129, 130, 138], "randi": [26, 32, 92, 94], "plan": [26, 30, 52, 60, 61, 62, 68, 97, 104, 136, 158], "schedul": 26, "2020": [26, 27, 58, 65, 110, 113, 130, 131, 132, 138, 140], "annual": 26, "meet": 26, "took": 26, "onlin": [26, 110, 114, 127, 155, 162], "covid": 26, "four": [26, 72, 94, 115, 116], "short": [26, 49, 52, 101, 132], "slide": 26, "tulan": 26, "clifford": 26, "lectur": 26, "april": [26, 130, 131, 138], "minisymposterium": 26, "cse": 26, "confer": 26, "februari": [26, 126, 132, 133, 138], "boulder": 26, "2015": [26, 59, 102, 123, 124, 125, 138], "summari": [26, 27, 45, 59, 127, 148, 149, 150, 151], "tackl": [26, 30], "progress": [26, 30, 104, 113, 118, 123, 162, 164], "held": [26, 52], "zoom": [26, 55], "conjunct": [26, 42, 70, 97, 115], "23": [26, 130, 131, 138, 149], "25": [26, 34, 42, 45, 57, 70, 75, 88, 94], "28": [26, 122, 123, 126, 127, 128, 129, 130, 138], "unives": 26, "colorado": 26, "immedi": [26, 52, 71, 88, 90, 91, 98], "august": [26, 127, 135, 136, 138], "utah": 26, "hpc": 26, "swag": 26, "introduct": 27, "commit": [27, 32, 54, 58, 59, 116], "licens": [27, 48, 52, 96, 114, 127], "cite": [27, 59, 61, 138], "fund": [27, 60, 96], "troubleshoot": [27, 60, 61, 96], "amazon": 27, "servic": [27, 65, 86], "ec2": 27, "ami": 27, "77": [27, 67, 107], "statist": [27, 124], "b4run": [27, 131], "sytl": [27, 36, 81], "checkpoint": [27, 47, 118, 124, 125, 127, 129, 132, 148, 150, 152], "share": [27, 28, 55, 62, 76, 78, 94, 97, 99], "gpu": [27, 129], "cautionari": [27, 48, 67, 151], "registr": [27, 48, 127, 162, 164], "earth": [27, 42, 48, 51, 56, 63, 70, 75, 123, 125, 133, 142, 151], "slip": [27, 32, 48, 49, 114, 162, 166], "sea_level": [27, 34, 42, 48, 52, 63, 102, 130, 144, 151, 162, 164], "eta": [27, 32, 36, 37, 42, 47, 48, 72, 115, 123, 130, 143, 151], "lagrangian": [27, 47, 48, 130], "particl": [27, 36, 47, 48, 130, 135], "friction": [27, 48, 52, 151, 156, 157], "fgout": [27, 34, 47, 48, 63, 72, 135, 137, 151], "nearshor": [27, 34, 36, 47, 48, 52], "front": [27, 34, 41, 42, 48, 71, 103, 109, 142], "geometri": [27, 32, 49, 75, 96, 97, 101, 103, 106, 123], "jupyt": [27, 46, 48, 75, 78, 96, 110, 114, 123, 124, 130, 140], "notebook": [27, 32, 34, 42, 46, 48, 58, 70, 75, 78, 90, 96, 98, 114, 123, 124, 130, 140, 141, 142, 164], "concept": [27, 140], "pointwis": [27, 34, 57, 106, 123, 162], "potenti": [27, 71, 125, 143], "fly": 27, "commun": [27, 55, 86, 106, 109, 111, 115, 127], "hope": [28, 116], "greatli": [28, 36, 86, 118, 135, 143], "submodul": [28, 30, 56, 59, 61], "stai": [28, 34], "annot": [29, 63], "map2d_to_1d": 29, "unavail": 29, "sens": [29, 55, 64, 127, 132, 170], "context": [29, 55, 167], "plotdata": [29, 36, 37, 47, 82, 84, 91, 118, 124, 125, 147], "els": [29, 30, 62, 70, 106, 127, 142, 144, 152], "scalar": [29, 32, 42, 98, 106, 140, 144, 148, 170], "moment": [29, 32, 128], "outn": 29, "outaux": 29, "prepar": 30, "substanti": [30, 58, 86, 123, 129, 132], "incompat": [30, 55], "built": [30, 31, 49, 68, 78, 87, 96, 99, 101, 103, 115, 116, 156, 157], "correctli": [30, 34, 89, 95, 123], "Be": [30, 71, 143, 166], "verbos": [30, 32, 35, 37, 51, 63, 70, 91, 94, 98, 104, 116, 142, 148, 150, 152, 158, 164], "messag": [30, 43, 51, 58, 62, 71, 76, 91, 94, 98, 100, 103, 104, 106, 107, 118, 132, 148, 150, 152, 165], "wise": [30, 104], "especi": [30, 55, 89, 101], "necessit": 30, "modif": [30, 43, 65, 71, 82, 86, 92, 151], "compat": [30, 32, 35, 51, 55, 63, 75, 77, 81, 97, 99, 107, 120, 121, 125, 126, 136, 164], "explan": 30, "tracker": 30, "increasingli": 30, "push": [30, 58, 59], "unlik": [30, 34, 58, 59, 77], "accid": 30, "subrepositori": [30, 59], "oppos": [30, 159], "inter": [30, 126], "proceed": [30, 58], "txt": [30, 34, 47, 54, 59, 64, 86, 98, 118, 125, 126, 127, 139, 158], "isol": [30, 62], "editabl": 30, "site": [30, 55, 62, 111], "pull_al": [30, 59], "sh": [30, 58, 59, 99], "prompt": [30, 31, 71, 82, 84, 93, 96, 108, 164], "shortli": [30, 116], "handi": [30, 66], "uncommit": [30, 54, 59], "checkout": [30, 56, 58, 59, 61], "claw_git_statu": [30, 54, 59, 131], "claw_git_diff": [30, 54, 59], "usernam": [30, 31], "mind": 30, "password": 30, "whenev": [30, 124, 167], "brought": 30, "new_featur": 30, "accident": [30, 82], "recov": [30, 35], "histori": [30, 37, 59, 62, 84], "throw": [30, 137], "awai": [30, 143], "recreat": [30, 43, 66, 130], "rebas": 30, "onto": [30, 32, 55, 144, 164], "newer": [30, 76, 92, 127], "head": [30, 32, 58], "cleaner": [30, 125], "recompil": [30, 43, 44, 66, 76, 109, 118, 130, 149, 167], "nosetest": [30, 39, 40, 99, 105, 116, 160], "fail": [30, 97, 99, 109, 116, 123, 158], "pr": [30, 59, 116, 127], "someon": [30, 66], "propos": [30, 170], "rid": 30, "cross": [30, 49], "poor": 30, "whole": [30, 55, 98, 99], "lot": [30, 42, 118, 130], "doesn": [30, 34, 62, 67, 106], "pep8": 30, "aim": 30, "vim": 30, "nice": [30, 63, 89, 101, 120, 142], "underlin": 30, "nose": [30, 39, 40, 87, 99, 116, 136, 160], "suit": [30, 55, 116], "exactli": [30, 35, 36, 54, 56, 72, 106, 142, 148], "overrid": [30, 44, 55, 88, 89, 109], "bind": [30, 55, 81, 89, 99], "dockerhub": [31, 59], "riemann_book": [31, 141], "0_dockerimag": 31, "8889": 31, "0_contain": 31, "serv": 31, "jovyan": 31, "exit": [31, 82, 99, 105], "ctrl": [31, 82], "quit": [31, 71, 82, 84, 154], "whatev": [31, 88, 103, 140], "ip": [31, 82, 84], "localhost": 31, "token": 31, "wherev": [31, 165], "ones": [31, 88, 89, 106, 127, 148, 149], "ipynb": [31, 32, 34, 42, 75, 114, 124, 141, 142], "chile2010a": [31, 114], "exercis": [31, 48, 114, 116], "transfer": 31, "laptop": [31, 96], "accomplish": [31, 42, 66], "0_geoclaw_dockerimag": 31, "contains": 31, "rm": [31, 58, 59, 66, 165], "1_contain": 31, "rmi": 31, "1_dockerimag": 31, "prune": 31, "dockeril": 31, "root": [31, 62, 97, 98, 103], "dockerfile_v5": 31, "0_geoclaw": 31, "test_bind": 31, "subfault": [32, 48, 127, 128, 166], "seafloor": [32, 52, 75, 144, 166], "rise_tim": [32, 75], "rise": [32, 75, 143, 144], "rise_time_start": [32, 75], "piecewis": [32, 34, 42, 47, 49, 57, 72, 75, 120, 140, 142, 162], "quadrat": [32, 75], "rise_time_end": [32, 75], "rise_fract": [32, 75], "csv": [32, 75, 127], "erron": [32, 75], "dtopotools_exampl": [32, 75, 114], "test_dtopotool": 32, "deal": [32, 52, 81, 98, 99, 106, 158, 164], "sub": [32, 116, 164], "dtopographi": [32, 75], "ucsbfault": [32, 75], "csvfault": [32, 75], "siftfault": [32, 75, 127], "segmentedplanefault": [32, 75], "fault1d": 32, "subfault1d": 32, "dtopography1d": 32, "plot_dz_contour": 32, "plot_dz_color": 32, "mw": [32, 127], "strike_direct": 32, "input_unit": 32, "coordinate_specif": [32, 75], "subclass": 32, "row": [32, 34, 57, 92, 115, 162, 164], "rupture_typ": [32, 75], "static": [32, 75, 127], "dtopo_typ": [32, 35, 49, 63, 75], "repres": [32, 49, 88, 94, 97, 101, 102, 104, 106, 164, 170], "dz_at_t": 32, "dz": [32, 35, 49, 144, 162], "dz_max": 32, "ab": [32, 56, 101, 109, 115, 142, 164], "self": [32, 35, 37, 104, 136, 164], "cmax_dz": 32, "dz_interv": 32, "colorbar_ticks": 32, "colorbar_labels": 32, "fig_kwarg": [32, 164], "appar": [32, 72, 76], "dz_cellave_at_t": 32, "compos": [32, 88], "mo": 32, "seismic": [32, 37, 48, 75], "containing_rect": 32, "create_dtopo_xi": [32, 75], "rect": [32, 142], "016666666666666666": 32, "buffer_s": [32, 75], "buffer": [32, 42, 47, 115, 124, 125, 149, 150, 164], "x1": [32, 34, 35, 36, 41, 51, 63, 89, 98, 115, 142, 149, 150, 151, 164], "x2": [32, 34, 35, 36, 41, 51, 63, 98, 115, 142, 149, 150, 151, 164], "y1": [32, 34, 35, 36, 41, 51, 63, 89, 98, 115, 142, 149, 150, 151, 164], "y2": [32, 34, 35, 36, 41, 51, 63, 98, 115, 142, 149, 150, 151, 164], "create_dtopographi": [32, 75], "valueerror": [32, 158, 164], "plot_subfault": 32, "plot_centerlin": 32, "slip_color": 32, "cmap_slip": 32, "cmin_slip": 32, "cmax_slip": 32, "slip_tim": 32, "plot_rak": 32, "xylim": 32, "plot_box": [32, 164], "axessubplot": 32, "centroid": [32, 75], "dip": [32, 49, 75], "jet": [32, 71], "rake": [32, 75], "drawn": [32, 55, 147], "plot_subfaults_depth": 32, "column_map": 32, "skiprow": 32, "delimit": 32, "dict": [32, 37, 91, 97, 102, 103, 106, 158, 164], "strike": [32, 75], "calculate_geometri": 32, "kinemat": [32, 48], "skip": [32, 130], "width": [32, 36, 49, 55, 63, 75, 77, 94, 101, 106, 115, 142, 150, 152], "rigid": [32, 127], "mu": [32, 127], "set_dynamic_slip": 32, "slip_at_dynamic_t": 32, "column_list": 32, "output_unit": 32, "adopt": [32, 104], "Not": [32, 55, 94, 125, 132], "noaa": [32, 42, 51, 57, 70, 75, 127, 143, 158, 162, 166], "sift": [32, 75, 127], "ucsb": [32, 75, 166], "definit": [32, 71, 88, 115, 122], "gov": [32, 42, 51, 70, 75, 99, 158], "aboutu": 32, "020204mag_polici": 32, "php": [32, 65, 86], "sift_slip": 32, "longitude_shift": 32, "subset": [32, 34, 42, 70, 127, 142, 162, 164, 166], "load_sift_unit_sourc": 32, "pmel": [32, 75], "pub": [32, 158], "gica2937": 32, "although": [32, 55, 67, 71, 100, 101, 103, 115, 128, 134, 164], "notat": [32, 51, 63, 140], "compress": [32, 97, 164], "info_sz": 32, "dat": [32, 158], "acsza1": 32, "acszb1": 32, "set_subfault": 32, "assign": [32, 34, 36, 88, 91, 97, 103], "coodin": 32, "pascal": [32, 158], "centerlin": 32, "respecitv": 32, "mix": [32, 41, 55, 75], "nctr": [32, 75], "upstrik": [32, 75], "updip": [32, 75], "calculate_geometry_triangl": 32, "triangular": [32, 48, 127], "lat": [32, 51, 55, 57, 63, 162, 164], "convert_to_standard_unit": 32, "measur": [32, 47, 49, 51, 75], "dynamic_slip": [32, 128], "rupture_tim": [32, 75], "rise_shap": 32, "gauss_pt": 32, "latitutd": 32, "modulu": [32, 102, 108, 150, 167], "shape": [32, 37, 42, 51, 63, 70, 89, 94, 97, 99, 106, 142, 164], "displac": [32, 36, 48, 49, 52, 75, 144, 151, 166], "1992": 32, "okadamap": 32, "rigin": 32, "dave": 32, "xiaom": 32, "wang": 32, "rewritten": 32, "dicuss": 32, "movement": 32, "sec": 32, "pw": [32, 34], "smooth": [32, 72, 104, 115, 167], "ruptur": [32, 48], "set_corn": 32, "projection_zon": 32, "iter": [32, 42, 70, 102], "1000000": 32, "x0": [32, 51], "orthogon": 32, "subdividedplanefault": 32, "base_subfault": 32, "nstrike": 32, "ndip": 32, "slip_funct": 32, "subdivid": [32, 75], "uniform": [32, 34, 36, 37, 48, 70, 75, 78, 89, 127, 162], "subdivis": 32, "slip_distribut": 32, "xi": [32, 167], "rescal": 32, "tensorproductfault": 32, "fault_plan": 32, "slip_along_strik": 32, "slip_down_dip": 32, "goe": [32, 48, 58], "constant": [32, 34, 36, 49, 52, 63, 68, 72, 99, 102, 140, 141, 142, 144, 151, 164, 167], "tensor": 32, "chen": [32, 166], "ji": [32, 166], "geol": 32, "edu": [32, 55, 97, 129], "faculti": 32, "big_earthquak": 32, "sea": [32, 47, 48, 50, 52, 55, 72, 75, 112, 123, 130, 143, 162, 164, 166], "floor": [32, 48, 75], "durat": [32, 132, 143], "slope": [32, 104, 132], "rf": [32, 58, 59], "bear": [32, 51, 118], "movabl": 32, "latlong": [32, 55], "happen": [33, 55, 66, 88, 103, 106, 130, 165], "filenam": [33, 55, 123, 135, 136, 164], "fgmax_tool": [34, 122, 130, 136, 151], "increment": [34, 47, 55, 94, 109, 148, 150, 152], "record": [34, 45, 47, 64, 106, 138, 158, 166], "observ": [34, 52, 119, 132, 143, 148, 151, 159, 166], "align": [34, 36, 42, 55, 63, 70, 130, 132, 151], "arbitrari": [34, 36, 63, 104, 119, 142, 151], "transect": [34, 51, 63, 118, 151], "coastlin": [34, 55, 70, 72, 130, 142, 151, 166], "quadrilater": [34, 63], "dem": [34, 48, 57, 63, 127, 162, 164, 166], "topo_typ": [34, 42, 49, 57, 63, 70, 123, 124, 127, 130, 162, 164], "point_styl": [34, 35, 70, 122], "fgmax_grid": [34, 35, 63, 130, 136, 151], "junction": 34, "purpos": [34, 36, 48, 52, 57, 65, 71, 77, 86, 94, 114, 116, 139, 142, 148], "maxima": [34, 76], "fgmax_data": [34, 151], "fgmaxgrid": [34, 35, 136, 151], "fgmax0001": 34, "fgno": [34, 35, 36, 37, 136], "sequenti": [34, 36], "fg_maxnum_fgrid": 34, "fgmax_modul": 34, "recomil": 34, "everyth": [34, 59, 62, 76, 99, 108, 109, 116, 127], "fg": 34, "tstart_max": 34, "tend_max": 34, "dt_check": 34, "min_level_check": 34, "arrival_tol": 34, "interp_method": 34, "npt": [34, 51], "xy_fil": 34, "regular": [34, 164], "cartesian": [34, 50, 63, 89, 151], "nx": [34, 36], "ny": [34, 36], "n12": 34, "n23": 34, "x3": [34, 63, 98], "y3": [34, 63, 98], "x4": [34, 63], "y4": [34, 63], "fourth": [34, 57], "perimet": 34, "intersect": [34, 49, 70, 75], "connect": [34, 49, 51, 58, 63, 70, 118, 130, 142], "expect": [34, 72, 102, 108, 109, 110, 116, 127, 128, 130, 132, 150, 151, 152, 158], "topofil": [34, 35, 49, 57, 63, 127, 128, 129, 130, 151, 162, 164], "south": [34, 49, 162], "preprocess": [34, 123], "satisfi": [34, 42, 70, 104, 115, 142, 170], "captur": [34, 47, 52, 64, 142, 162], "posit": [34, 42, 55, 75, 78, 109, 151, 162, 164], "digit": [34, 36, 42, 57, 63, 64, 82, 125, 126, 127, 164], "correspondingli": 34, "1e9": [34, 41, 64], "simul": [34, 38, 39, 40, 42, 50, 52, 55, 71, 72, 91, 94, 96, 98, 99, 101, 105, 108, 113, 125, 126, 127, 129, 142, 144, 158], "exce": [34, 55, 115, 149], "care": [34, 42, 48, 99], "start_max": 34, "natur": [34, 49, 58, 140, 170], "discard": [34, 104], "reiniti": [34, 125], "depress": 34, "margin": [34, 48], "fgmax_valu": 34, "eta_tild": 34, "speed": [34, 36, 37, 49, 88, 92, 102, 108, 118, 125, 130, 140, 141, 148, 151, 158, 159, 164, 167, 170], "harbor": 34, "ship": 34, "ground": [34, 75, 130], "fg_num_val": 34, "num_fgmax_v": [34, 151], "govern": [34, 151], "fgmax_interpol": 34, "fgmax_interpolate0": 34, "fgmax_interp": [34, 132], "unrealist": [34, 72], "island": [34, 42, 70, 142], "65": 34, "amr_levels_max": [34, 115, 149, 150], "8000": 34, "e10": 34, "stop": [34, 76, 82, 118, 119, 127, 150, 152, 164], "20": [34, 42, 53, 55, 57, 63, 70, 79, 82, 102, 115, 149, 150, 151, 162, 164], "const": 34, "fg1": 34, "valuemax": 34, "aux1": 34, "fgmax0002": 34, "explicitli": [34, 67, 71, 96, 132, 148, 165, 170], "dealt": [34, 42], "read_output": [34, 35, 136], "paragraph": 34, "qoi": [34, 37], "2n": 34, "hmin": 34, "13": [34, 47, 161], "99999000e": 34, "99": [34, 150, 152], "never": [34, 72, 101, 106, 112, 115, 130, 142, 148, 150, 152, 165], "met": [34, 65, 86], "make_input_fil": 34, "readm": [34, 36, 58, 59, 130, 140, 146, 167], "chile2010_fgmax": [34, 36, 135], "bound": [35, 37, 89, 92, 99, 136, 142, 148, 164], "interp_dz": 35, "dtopo_path": 35, "b0": [35, 37], "event": [35, 48, 52, 63, 65, 75, 86, 143, 144, 148], "ps4_to_arrai": 35, "mask": [35, 42, 48, 53, 142, 164], "topo_styl": 35, "xy_fnam": 35, "read_fgmax_grids_data": 35, "data_fil": [35, 37], "ij": [35, 136], "xy": [35, 63, 136], "layout": [35, 58, 136], "unexpect": [35, 51, 55, 63, 66, 158], "indent": [35, 51, 63], "quot": [35, 63], "unind": [35, 63, 158], "topotool": [35, 42, 48, 51, 57, 63, 70, 120, 121, 122, 123, 124, 127, 128, 133, 136, 162, 163], "write_to_fgmax_data": 35, "fid": [35, 37], "adjust_fgmax_1d": 35, "x1_desir": 35, "x2_desir": 35, "x1_domain": 35, "x1_new": 35, "x2_new": 35, "npoint": 35, "linspac": [35, 71, 91, 108, 142], "fgout_tool": [36, 151], "complement": 36, "coincid": 36, "wherea": [36, 47, 55, 72, 81, 99], "occur": [36, 66, 75, 158, 159], "signific": [36, 68, 135, 138, 143, 164], "increas": [36, 37, 47, 55, 63, 76, 142, 151], "degrad": 36, "had": [36, 47, 56, 57, 125, 126, 127, 128, 132, 144], "tempor": [36, 47, 64], "seri": [36, 47, 64, 72, 158], "fact": [36, 55, 72, 97, 106, 110, 115, 144], "gauag": 36, "massless": 36, "tracer": [36, 141], "debri": 36, "fixedgrid": [36, 48, 135, 137], "carri": 36, "throughout": [36, 72, 125], "fgout_data": [36, 151], "fgout_grid": [36, 37, 63, 151], "fgoutgrid": [36, 37, 151], "runtim": [36, 109], "binary32": [36, 47, 77, 97, 135, 148, 150, 152], "200": [36, 55, 88, 108, 123, 152], "250": 36, "115": 36, "55": 36, "tstart": [36, 104], "tend": [36, 42, 104], "nout": [36, 77, 152], "37": [36, 51], "ascii": [36, 47, 57, 71, 88, 91, 98, 103, 125, 135, 136, 139, 148, 150, 152, 162, 168], "binary64": [36, 47, 77, 97, 135, 148, 150, 152], "float64": [36, 135, 148], "kind": [36, 91, 93, 98, 118, 129, 135, 140, 148], "float32": [36, 135, 148], "dump": [36, 77, 97, 135, 136, 148], "raw": [36, 97, 135, 148], "almost": [36, 148, 154], "precis": [36, 37, 44, 47, 63, 77, 89, 94, 97, 140, 148, 164], "fgout0001": 36, "t0000": [36, 71], "q0000": [36, 71, 148], "b0000": 36, "amr_level": [36, 77], "hierarchi": [36, 55, 94, 111], "file_prefix": [36, 97, 103, 135], "easier": [36, 62, 81, 125, 127, 142, 167], "manipul": [36, 47, 164], "fgframe": 36, "read_fram": [36, 37], "lazi": 36, "hss": [36, 37], "plottool": [36, 42, 70, 130], "pcolorcel": [36, 42, 70, 130, 142], "minimalist": 36, "geoplot": [36, 53, 55, 83], "cmap": [36, 42, 55, 63, 70, 82, 142, 164], "land_color": 36, "masked_wher": 36, "eta_plot": 36, "tsunami_colormap": 36, "overlap": [36, 115, 119, 120, 162], "fgout_interp": 36, "fgout_modul": 36, "unphys": 36, "intepol": 36, "fgout_writ": 36, "fgoutfram": 37, "make_fgout_fcn_xi": 37, "make_fgout_fcn_xyt": 37, "write_netcdf": 37, "read_netcdf": [37, 42, 70, 127, 128, 162, 164], "reconstruct": [37, 96, 104, 158], "read_netcdf_arrai": 37, "extract": [37, 55, 97, 136, 158, 164, 166], "print_netcdf_info": 37, "drytol": 37, "extent_cent": 37, "extent": [37, 41, 42, 52, 60, 63, 68, 70, 71, 88, 94, 106, 119, 132, 142, 162, 164], "extent_edg": 37, "read_fgout_grids_data": 37, "set_plotdata": 37, "write_to_fgout_data": 37, "get_as_arrai": 37, "rootgrp": 37, "bounds_error": 37, "fill_valu": [37, 97, 164], "nan": [37, 51, 164], "behavior": [37, 48, 58, 72, 115, 116, 124, 130, 132, 154], "regulargridinterpol": 37, "fgout1": 37, "fgout2": 37, "method_xi": 37, "method_t": 37, "linearli": 37, "fname_nc": 37, "contin": 37, "bfinal": 37, "qoi_arrai": 37, "fgout_fram": 37, "nc": [37, 42, 70, 127, 158, 162], "datatyp": 37, "f4": 37, "include_b0": 37, "include_bfin": 37, "metadata": [37, 77, 162, 164], "f8": 37, "byte": [37, 47, 77, 97], "twice": [37, 55, 139, 148], "downstream": 37, "field": [37, 47, 63, 101, 103, 106, 125, 127, 135, 158, 159], "first_test": 38, "euler_2d": [38, 40, 96, 101], "shock_bubble_interact": [38, 40, 93, 96, 105], "iplot": [38, 40, 93, 96, 99], "That": [38, 40, 42, 108, 162], "ensur": [38, 39, 40, 71, 113], "install_prerequisit": 38, "acoustics_1d_example1": [38, 39, 74], "statement": [38, 39, 71, 77, 110, 111, 118, 125, 134, 150], "troubl": [38, 39, 81, 96], "xclaw": [38, 39, 91], "plotting_makeplot": [38, 39], "fortfil": [38, 39], "install_fortran": 39, "prerequisit": [39, 40, 48, 60, 62, 118], "sv": [39, 160], "runtest": [39, 99, 160], "acoustics_1d_heterogen": [39, 160, 167], "regression_test": [39, 160], "acoustics1dheterogeneoustest": [39, 160], "acoustics_3d_heterogen": [39, 160], "acoustics3dheterogeneoustest": [39, 160], "advection_2d_annulu": [39, 160], "advection2dannulustest": [39, 160], "ran": [39, 160], "639": [39, 160], "manual": [40, 89, 98, 105, 107, 116, 160], "launch": [40, 93, 99, 100, 105], "setup": [40, 59, 88, 89, 93, 96, 99, 101, 104, 105, 106, 114, 146, 165], "regiondata": [41, 115, 150, 151], "minlevel": [41, 115, 132, 142, 149, 150, 151], "maxlevel": [41, 71, 115, 132, 142, 149, 150, 151], "clariti": 41, "ultim": 41, "flagregiondata": [41, 130], "everywher": [41, 42, 51, 68, 106, 144], "supplement": [41, 70, 153], "rundatat": 41, "region_domain": 41, "spatial_region_typ": 41, "spatial_region": 41, "restrict": [41, 55, 127, 142, 151, 162], "insid": [41, 94, 99, 103, 140, 142, 164], "trapezoid": 41, "region_trapezoid": 41, "spatial_region_fil": 41, "ruledrectangle_trapezoid": 41, "region_tool": [41, 42, 70, 130, 131, 142], "rr": [41, 70, 71, 84, 142], "ruledrectangl": [41, 70, 130, 142], "piecewiselinear": 41, "ixi": [41, 70, 140, 142], "advection_2d_flagregion": 41, "constraint": [42, 47, 142, 149, 170], "dike": [42, 70, 130, 151], "creation": [42, 82, 96, 119], "even": [42, 52, 55, 62, 65, 75, 86, 97, 109, 115, 130, 149, 150, 162, 165, 167], "inlin": [42, 141], "marching_front": [42, 70, 130], "zmin": [42, 70], "60": [42, 55, 70, 75, 76, 130, 149], "zmax": [42, 70], "40": [42, 55, 70, 77, 115, 151, 161], "land_cmap": 42, "make_colormap": [42, 70, 82], "sea_cmap": 42, "norm": [42, 63, 70, 115, 164], "add_colormap": [42, 70, 124, 130], "data_limit": [42, 70], "data_break": [42, 70, 164], "sea_cmap_dri": 42, "cmap_dri": [42, 70], "norm_dri": [42, 70], "sw": [42, 57, 70, 141], "coast": [42, 70, 115, 144, 164], "whidbei": [42, 70, 142], "maxwelton": [42, 70], "beach": [42, 70, 141], "marchingfront": 42, "region1_png": [42, 70], "imread": [42, 70], "region1": [42, 70], "46": [42, 70, 164], "38": [42, 70], "47": [42, 70, 142], "93": [42, 70, 124], "96": [42, 70], "imshow": [42, 70, 118, 164], "48": [42, 55, 70, 142], "puget": [42, 70, 142], "sound": [42, 70, 88, 102, 108, 142], "ncei": [42, 70, 143, 162, 166], "thredd": [42, 70, 162, 166], "ngdc": [42, 70, 143], "dodsc": [42, 70], "puget_sound_13_mhw_2014": [42, 70], "colorbar": [42, 63, 70, 127, 130, 142, 147, 164], "mhw": [42, 48, 52, 143, 162, 166], "wetland": [42, 70], "lake": [42, 48, 70, 144, 151, 162], "repeat": [42, 70, 84, 139, 149, 151], "wet_point": [42, 70], "select_by_flood": [42, 70], "z1": [42, 70], "z2": [42, 70], "max_it": [42, 70], "zdry": [42, 70], "masked_arrai": [42, 70, 142], "279936": [42, 70], "112": [42, 70], "59775": [42, 70], "mislead": [42, 72], "pink": [42, 63, 82, 147], "distinguish": 42, "wet": [42, 48, 70, 72, 142, 151], "mask_dri": 42, "logical_not": [42, 70], "z_dry": 42, "mask_dry_onshor": 42, "logical_and": [42, 70], "z_allow_wet": 42, "rotat": [42, 49, 53, 136], "dry_point": 42, "shorelin": [42, 55, 164], "inland": [42, 70, 151], "sum": [42, 47, 75, 98, 106, 161], "3x3": 42, "dry_points_sum": 42, "reset": [42, 44, 58, 109], "white_r": 42, "461": 42, "379": 42, "929": 42, "961": 42, "z_format": [42, 70, 164], "1i": [42, 70], "fuction": 42, "set_xyz": [42, 164], "force_dry_init_topo": 42, "_y": [42, 70, 164], "_z": [42, 70, 164], "generate_2d_coordin": [42, 70, 164], "fname_force_dry_init": 42, "864": 42, "ncol": [42, 123], "324": 42, "nrow": 42, "224599074275750e": 42, "02": [42, 63, 97, 102, 150], "793009258334999e": 42, "259259000800000e": 42, "05": [42, 92, 102], "cellsiz": [42, 57, 123, 162], "9999": [42, 57, 162, 164], "nodata_valu": [42, 164], "forcedri": [42, 151], "force_dri": [42, 63, 130], "fname": [42, 63, 132, 142, 150, 151, 152], "qinit_data": [42, 144, 151], "force_dry_list": [42, 151], "setprob": [42, 67, 150, 152, 167], "qinit_modul": 42, "filval": 42, "t_stays_dri": 42, "gotten": 42, "offer": [43, 55, 116], "Or": [43, 63, 84, 142, 164], "dot": [43, 47, 55, 63, 66, 165], "unix": [43, 74], "invis": [43, 123], "encount": [43, 55, 82, 105, 107], "catch": [43, 96], "bash": [44, 55, 61, 62, 71, 76, 99, 111, 146], "export": [44, 55, 61, 62, 71, 76, 99, 107, 146], "f77": [44, 165], "compliant": 44, "yourself": [44, 47, 61], "rerun": [44, 47, 57, 59, 62], "scan": 44, "abil": [44, 118, 123, 125, 129, 158, 164], "meant": [44, 94, 104, 158], "pedant": 44, "fbound": 44, "ffpe": 44, "trap": 44, "invalid": [44, 103], "overflow": [44, 118, 126], "optim": [44, 86, 109], "o2": [44, 76], "fopenmp": [44, 76, 109], "dnetcdf": [44, 162], "lnetcdf": 44, "netcdf4_dir": 44, "ifort": 44, "cb": 44, "cu": 44, "fpe0": 44, "ftrapuv": 44, "fp": 44, "qopenmp": 44, "omp_num_thread": [44, 76, 125, 161], "thread": [44, 76, 115, 130, 161], "2006": [45, 151], "playlist": 45, "pressur": [47, 71, 84, 98, 102, 108, 126, 127, 151, 158, 159], "tide": [47, 48, 51, 127, 143, 164], "behav": [47, 49], "difficult": 47, "clearli": [47, 52, 55, 142], "accuraci": [47, 68, 78, 150, 152], "nonphys": 47, "oscil": [47, 170], "prior": [47, 64, 65, 86, 138, 144, 150, 152, 167], "gaugedata": [47, 64, 150], "gaugeno": [47, 64, 150], "meqn": [47, 77, 140, 167], "varieti": [47, 91], "basi": [47, 71], "file_format": [47, 97, 103, 135, 158], "smallest": [47, 115, 142], "reduct": [47, 118], "display_format": [47, 64], "e15": 47, "q_out_field": 47, "aux_out_field": 47, "min_time_incr": [47, 64], "amount": [47, 52, 58], "decreas": [47, 144, 162], "effect": [47, 55, 68, 71, 94, 98, 115, 116, 143, 151, 154, 164], "turn": [47, 50, 52, 63, 79, 82, 98, 116, 124, 130, 135], "id": [47, 51, 103], "e26": 47, "16": [47, 55, 63, 75, 94, 142, 148], "e8": 47, "multilay": [47, 120, 123, 126, 127, 128], "accumul": [47, 125, 139], "intermit": [47, 125], "max_buff": [47, 125], "gauges_modul": [47, 123, 125], "distinct": [47, 125], "gauge00001": [47, 64, 125], "quickli": [47, 58, 63, 90, 125, 144, 164], "overwritten": [47, 97, 98, 125, 139, 167], "gaugexxxxx": [47, 125, 139], "monoton": [47, 148, 151], "pars": [47, 109], "gaugesolut": 47, "gauge_id": 47, "getgaug": 47, "plotfigur": [47, 82, 118, 147], "300": [47, 142], "each_gaug": 47, "1d_plot": [47, 82, 84, 147], "setgaug": [47, 124], "each_fram": 47, "plotclaw": [47, 81, 82, 84, 147], "plotgaug": 47, "loop": [47, 71, 81, 109, 115, 118, 127, 130, 132, 140, 144, 147, 148, 167], "cleargaug": 47, "_output_from_previous_run": 47, "2d_pcolor": [47, 55], "addgaug": 47, "plot_gauge_loc": 47, "format_str": 47, "ko": 47, "add_label": 47, "overview": [48, 55, 81, 117, 121, 130], "teach": [48, 52, 114], "guarante": [48, 52, 104, 114], "liabil": [48, 52, 65, 86, 114], "underwat": [48, 55], "robust": [48, 127, 141, 164], "gallery_geoclaw": 48, "dtopotool": [48, 75, 121, 122, 124, 127, 128, 162, 163], "kmltool": [48, 51, 130, 131, 133, 163], "geo": [48, 68], "chile": [48, 63, 75], "2010": [48, 63, 75, 151], "dart": 48, "buoi": 48, "previous_pts_chosen": 48, "arcsecond": [48, 162], "force_dry_init": [48, 130], "topograpi": [48, 162], "wide": [49, 62, 111, 141], "insur": [49, 54, 58, 66, 84, 115, 119, 123, 149, 151, 162], "contrast": [49, 57, 142], "newli": 49, "roughli": [49, 56, 142, 161], "transit": [49, 136, 137], "sometim": [49, 62, 66, 70, 78, 82, 88, 98, 118, 127, 134, 143, 144, 151, 159, 166], "prefer": [49, 63, 99, 101, 146, 149, 158], "topo1d": 49, "1d_classic": [49, 118], "geo_data": [49, 64, 137, 151, 154], "rotation": 49, "geometr": [49, 154, 167], "spread": 49, "crater": 49, "endpoint": 49, "pole": 49, "ordinari": [49, 140], "Near": 49, "disturb": [49, 55], "decai": 49, "refocu": 49, "grid_data": 49, "grid_typ": 49, "te": 49, "nonuniform": [49, 71], "fname_celledg": 49, "nonuniform_grid_tool": 49, "make_mapc2p": 49, "deeper": [49, 142, 151, 162], "ocean_shelf_beach": 49, "topo_data": [49, 151], "topofile_path": 49, "dtopo_data": [49, 119, 151], "dtopofil": [49, 63, 75, 151], "dtopofile_path": 49, "mt": [49, 162], "okada_dtopo": 49, "dms2decim": 51, "decim": [51, 63], "dist_meters2latlong": 51, "dist_latlong2met": 51, "haversin": 51, "great": [51, 93, 118], "inv_haversin": 51, "invert": 51, "gctransect": [51, 118], "fetch_noaa_tide_data": 51, "predict": 51, "y0": 51, "bearing_unit": 51, "radian": 51, "beta": [51, 92, 104, 152], "sin": [51, 82], "longitudin": 51, "latitudin": 51, "coord": [51, 55], "negat": [51, 162], "30": [51, 55, 57, 115, 149, 151, 162], "51": 51, "span": [51, 55, 63], "station": [51, 143, 166], "begin_d": 51, "end_dat": 51, "time_zon": 51, "gmt": 51, "datum": [51, 52, 102, 143, 151, 166], "stnd": 51, "metric": 51, "cache_dir": 51, "begin": [51, 63, 94, 98, 102, 108, 141, 158], "op": 51, "api": [51, 127], "tidesandcurr": 51, "scratch": [51, 70, 108], "charact": 51, "datetim": [51, 158], "date_tim": 51, "ndarrai": [51, 92, 94, 102, 106, 158, 164], "water_level": 51, "preliminari": [51, 127, 166], "verifi": [51, 109, 116, 166], "rearth": 51, "6367500": 51, "pm": 51, "tohoku": 51, "crescent": 51, "citi": 51, "xtran": [51, 63], "ytran": [51, 63], "142": 51, "124": 51, "41": [51, 161], "74": [51, 55], "transect2kml": [51, 63], "kml": [51, 63, 123, 125, 126, 127, 130, 131, 142], "formula": [51, 68, 144], "stackexchang": 51, "1783746": 51, "rsphere": [51, 89], "believ": [52, 110, 125, 130], "real": [52, 59, 68, 109, 140, 166], "world": [52, 68, 96, 99, 158], "intend": [52, 89, 127], "approv": 52, "nhtmp": 52, "benchmark": 52, "nthmp": 52, "awar": [52, 99], "scenario": [52, 143], "invest": 52, "learn": [52, 93, 110], "geohazard": 52, "geoscientist": 52, "expert": 52, "cautiou": 52, "sensit": [52, 68], "confirm": 52, "imposs": [52, 148], "encapsul": 52, "knowledg": 52, "inaccuraci": 52, "uncertainti": [52, 68], "subduct": [52, 75], "zone": [52, 55, 63, 149, 150], "understood": 52, "turbul": [52, 104], "bore": 52, "inaccur": 52, "becom": [52, 107, 170], "agreement": 52, "caution": 52, "empir": [52, 68], "corioli": [52, 151, 156, 157], "littl": [52, 75, 97, 143], "coriolis_forc": [52, 151], "know": [52, 62, 66, 75, 86, 113, 126, 130, 132, 140, 143, 164, 165, 166], "upward": 52, "realiti": 52, "hard": [53, 58, 76, 82, 164], "disabl": [53, 97, 105, 151], "plain": 53, "mean_latitud": 53, "hash": [54, 58, 116], "print_git_statu": 54, "git_statu": 54, "power": [55, 60, 81], "georeferenc": 55, "simultan": [55, 125], "gi": [55, 125, 162], "critic": [55, 98, 140], "decis": 55, "nevertheless": 55, "lxml": 55, "pykml": 55, "conda": 55, "pyramid": 55, "geospati": 55, "abstract": 55, "osx": [55, 85], "macport": 55, "homebrew": [55, 85], "gdal_data": 55, "gc": 55, "cv": [55, 71], "epsg": 55, "wkt": 55, "georefer": 55, "warp": 55, "anaconda": [55, 105], "gdal_test": 55, "frame0005fig1": 55, "1440": 55, "1440p": 55, "1440l": 55, "frame0005fig1_tmp": 55, "vrt": 55, "band": [55, 164], "destin": 55, "100": [55, 75, 88, 91, 94, 103, 106, 108, 124, 127, 142, 152, 164], "receiv": [55, 116], "libgdal": 55, "dylib": 55, "liblzma": 55, "xz": 55, "setplot_fil": 55, "setplot_kml": 55, "chile_2010": 55, "slider": [55, 63], "panel": 55, "chile2010": [55, 114, 115, 119, 122, 128, 162], "kml_name": 55, "kml_starttim": 55, "utc": [55, 63], "kml_tz_offset": 55, "kml_index_fnam": 55, "_googleearth": 55, "kml_user_fil": 55, "santiago": 55, "kml_publish": 55, "kml_map_topo_to_latlong": 55, "sidebar": [55, 58], "kml_timezon": 55, "japan": [55, 63], "address": [55, 58, 125], "host": 55, "kml_xlimit": 55, "kml_ylimit": 55, "kml_use_figure_limit": 55, "member": [55, 101, 103, 108], "googleearth": [55, 63], "placemark": 55, "geograph": 55, "viewabl": [55, 91], "remain": [55, 62, 101, 109, 111, 119, 156, 157, 158], "use_for_kml": 55, "120": 55, "kml_use_for_initial_view": 55, "kml_figsiz": 55, "kml_dpi": [55, 63], "kml_tile_imag": 55, "longitude_min": 55, "longitude_max": 55, "latitude_min": 55, "latitude_max": 55, "camera": 55, "size_x_inch": 55, "size_y_inch": 55, "dpi": [55, 63], "pixel": [55, 63], "qualiti": [55, 131], "backend": 55, "furthermor": [55, 108], "pseudo": [55, 71], "height": [55, 102, 164], "transpar": [55, 63], "surface_or_depth": [55, 83], "cmin": [55, 63], "googleearth_transpar": 55, "kml_colorbar": 55, "cmax": [55, 63], "kml_build_colorbar": [55, 63], "alter": 55, "occupi": 55, "contourf": [55, 81], "googleearth_lightblu": 55, "googleearth_darkblu": 55, "appeal": 55, "overlaid": [55, 63], "ridg": 55, "lighter": 55, "darker": 55, "folder": 55, "hide": [55, 71], "unalt": 55, "map_topo_to_latlong": 55, "contan": 55, "referenc": [55, 138, 143, 162], "un": 55, "unzip": 55, "zipinfo": 55, "groundoverlai": 55, "edit": [55, 58, 59, 62, 84], "entri": [55, 64, 88, 98, 109, 158], "low": [55, 70, 89, 164, 166], "unapp": 55, "8x6": 55, "1600": [55, 77], "1200": 55, "notic": [55, 65, 86, 108, 116], "stripe": 55, "plaid": 55, "neither": [55, 63, 65, 86, 125], "evenli": [55, 98], "30x30": 55, "360x360": 55, "baselin": 55, "unaccept": 55, "sharper": [55, 63], "32768": 55, "accordingli": [55, 162], "subject": [55, 70, 115, 149, 151], "round": 55, "prevent": 55, "118": 55, "116": [55, 122], "18": [55, 102, 120, 121, 138], "rcl": 55, "1200x1680": 55, "overland": 55, "flood": [55, 70, 144], "topograph": 55, "longtitud": 55, "crucial": [55, 162], "assumpt": [55, 58], "48000": 55, "17540": 55, "map_cart_to_latlong": 55, "xc": [55, 108], "yc": 55, "topo_xlim": 55, "ge_xlim": 55, "111": [55, 125], "96132553": 55, "36256443": 55, "slope_x": 55, "xp": [55, 89], "topo_ylim": 55, "17500": 55, "ge_ylim": 55, "43": 55, "79453362": 55, "95123268": 55, "slope_i": 55, "yp": [55, 89], "teton": 55, "dam": [55, 144], "collabor": [55, 153], "weight": 55, "boisest": 55, "detect": [55, 66, 97, 105, 109, 165], "clawpack_gpu": 56, "cpp": 56, "cannot": [56, 62, 97, 132, 144, 158], "comparison": 56, "motlei": 56, "1029": 56, "2019ms001635": 56, "acceler": [56, 102], "arxiv": 56, "1808": 56, "02638": 56, "tree": [56, 62, 101, 146], "geo_gpu_pap": 56, "esri": [57, 162], "wikipedia": 57, "tell": [57, 77, 82, 88, 97, 111, 116], "llcorner": [57, 162, 164], "llcenter": [57, 162, 164], "xllcenter": [57, 127, 162], "yllcenter": [57, 127, 162], "nodatavalu": [57, 162], "3000": [57, 162], "4000": [57, 162], "xllcorner": [57, 162], "yllcorner": [57, 162], "smoothli": [57, 72], "our": [57, 67, 88, 113], "represent": [57, 94, 97, 103, 109, 164], "grid_registr": [57, 164], "crop": [57, 164], "coarsen": [57, 115, 127, 128, 149, 162, 164], "subsampl": [57, 162, 166], "coarsen_method": 57, "lon": [57, 162], "md": [58, 59, 127, 146], "intersphinx": 58, "documen": 58, "retir": 58, "conf": [58, 59], "mess": 58, "ff": [58, 63], "hasn": 58, "improperli": 58, "html_theme": 58, "_theme": 58, "flask_loc": 58, "_static": 58, "clawlogo": 58, "jpg": [58, 71], "logo": [58, 126], "clawicon": 58, "ico": 58, "icon": 58, "_templat": [58, 59], "literalinclud": 58, "setaux_default": 58, "rst": [58, 59, 130], "_build1": 58, "rebuilt": 58, "rebuild": 58, "multivers": 58, "sphinxcontrib": 58, "_build": 58, "smv_branch_whitelist": 58, "cp": [58, 59, 74], "fix_links_top_level": 58, "sphinx_web": 58, "decoupl": 58, "resid": [58, 66, 94], "remak": 58, "rsync": 58, "azv": 58, "extra_fil": 58, "cname": 58, "godaddi": 58, "verbatim": 58, "recurs": [58, 59, 74, 119], "rsync_clawpack": 58, "clawdev2013": 58, "redirect": 58, "an11": 58, "geoclawdev": 58, "clawdev": 58, "offici": [59, 85, 127], "subrepo": 59, "__init__": [59, 101, 111, 136], "1rc": 59, "rc": 59, "kentzo": 59, "prefix": [59, 91, 97, 98, 103], "gzip": [59, 97, 130], "draft": 59, "gz": [59, 61], "attach": [59, 97, 106], "upstream": 59, "repo": 59, "permiss": [59, 62, 65, 86], "trickeri": 59, "temp": 59, "mv": 59, "xf": 59, "python3": [59, 111, 126, 132, 137], "sdist": 59, "dist": 59, "xzf": [59, 61], "pkg": [59, 152], "cf": [59, 162], "upload": 59, "testpypi": 59, "twine": 59, "credenti": 59, "okai": 59, "pip3": 59, "uninstal": [59, 62, 111], "dir": [59, 99, 168], "820730": [59, 138], "changes_to_mast": 59, "release_5_x_x": 59, "5_x_x": 59, "installing_pip": 59, "installing_fortcod": 59, "docker_imag": 59, "ideal": [59, 102, 143], "sept": [59, 132], "regist": 60, "untar": 61, "pythonpath": [61, 62], "pypi": [62, 97], "think": [62, 68, 70, 72, 102], "clawpack_src": [62, 111], "egg": 62, "f2py": [62, 78, 89, 96, 101, 109, 140], "installing_opt": 62, "mechan": [62, 106, 138], "fc": [62, 89, 107, 109, 118, 165], "comfort": [62, 101], "claw_vers": 62, "wrong": [62, 67, 71, 98, 111], "pth": 62, "went": [62, 141], "overlai": [63, 133], "bgr": 63, "hex": [63, 82], "00ff00": 63, "yellow": [63, 82], "deg2dm": 63, "regions2kml": 63, "outlin": [63, 71, 84, 130, 140, 147], "box2kml": 63, "quad2kml": 63, "poly2kml": 63, "line2kml": 63, "gauges2kml": 63, "marker": 63, "topo2kml": 63, "dtopo2kml": 63, "fgmax2kml": [63, 130], "fgout2kml": 63, "make_input_data_kml": 63, "pcolorcells_for_kml": [63, 130], "pcolormesh": [63, 70], "png2kml": 63, "wrap": [63, 86, 89, 94, 104, 109, 158], "ge": 63, "topo2kmz": [63, 133], "kmz": [63, 125], "offshor": [63, 68, 70, 142, 144], "kml_header": 63, "kml_footer": 63, "kml_region": 63, "kml_gaug": 63, "kml_png": 63, "kml_cb": 63, "aabbggrr": 63, "dtopo_file_nam": 63, "8888ff": 63, "f2": 63, "num_digit": 63, "trail": 63, "NOT": [63, 65, 82, 86], "cb_filenam": 63, "close_fig": 63, "nrm": 63, "kml_timespan": 63, "event_tim": 63, "tz": 63, "tscale": 63, "timespan": 63, "27t06": 63, "00": [63, 77, 150], "03": [63, 102], "27t07": 63, "04": [63, 94, 102], "daylight": 63, "dst": 63, "timezon": 63, "magic": 63, "tabl": [63, 68, 81, 97], "wisdom": 63, "00ffff": 63, "png_filenam": 63, "dpc": 63, "max_inch": 63, "sharp": 63, "x_edg": [63, 142], "y_edg": [63, 142], "allot": 63, "smear": 63, "slowli": 63, "x_inch": 63, "y_inch": 63, "dcp": 63, "x_cell": 63, "y_cell": 63, "fig": [63, 142], "png_extent": 63, "savefig": [63, 135], "construc": 63, "png_file": 63, "png_name": 63, "radio_styl": 63, "cb_file": 63, "cb_name": 63, "cb_xfrac": 63, "cb_yfrac": 63, "radio": 63, "poli": 63, "max_vertices_in_descript": 63, "quad": 63, "region00": 63, "topo_file_nam": 63, "zlim": 63, "mask_outside_zlim": 63, "eas": [63, 136], "outsiz": 63, "pyplot": [63, 141, 164], "xg": 64, "yg": 64, "stationari": [64, 162], "huge": [64, 70, 144, 162], "frequenc": [64, 75, 104], "ug": 64, "vg": 64, "dt": [64, 89, 94, 98, 104, 118, 148, 150, 152, 162, 167], "euler": [64, 96, 104, 121, 123, 126, 128, 140, 167], "gtype": 64, "particle_tool": [64, 130], "opensourc": [65, 86], "copyright": [65, 86], "reserv": [65, 86], "redistribut": [65, 86], "permit": [65, 86], "retain": [65, 86, 97], "disclaim": [65, 86], "nor": [65, 86], "endors": [65, 86], "promot": [65, 86], "BY": [65, 86], "THE": [65, 86], "holder": [65, 86], "AND": [65, 86], "AS": [65, 86], "OR": [65, 86, 158], "impli": [65, 86, 151], "warranti": [65, 86], "BUT": [65, 86], "OF": [65, 86], "merchant": [65, 86], "fit": [65, 86], "FOR": [65, 86], "IN": [65, 86], "NO": [65, 86], "shall": [65, 86], "BE": [65, 82, 86], "liabl": [65, 86], "indirect": [65, 86], "incident": [65, 86], "exemplari": [65, 86], "consequenti": [65, 86], "procur": [65, 86], "substitut": [65, 86], "loss": [65, 86], "profit": [65, 86], "busi": [65, 86], "interrupt": [65, 86], "ON": [65, 82, 86], "strict": [65, 86], "tort": [65, 86], "neglig": [65, 76, 86, 151], "aris": [65, 86, 118], "IF": [65, 86, 151], "advis": [65, 86], "SUCH": [65, 86], "isn": [66, 76, 77, 165], "bomb": [66, 76], "abort": 66, "claw_outdir": [66, 82], "regener": 66, "safer": 66, "run1": 66, "suffix": [66, 164], "conlict": 66, "advection_1d_example1": 67, "classic_1d": 67, "exclud": 67, "exclude_modul": 67, "exclude_sourc": 67, "rp1_advect": 67, "lib": [67, 111], "common_sourc": 67, "bc1": [67, 109], "claw1ez": 67, "claw1": [67, 109], "copyq1": 67, "inlinelimit": 67, "opendatafil": 67, "out1": 67, "src1": [67, 157, 167, 170], "step1": 67, "wouldn": 67, "spite": [67, 70, 111], "bc1_inflow": 67, "matter": [67, 123], "_t": 68, "cdot": [68, 101, 142], "gamma": [68, 102], "frac": [68, 102, 108, 170], "gn": 68, "gravit": [68, 102, 151, 167], "rough": 68, "terrain": 68, "seab": 68, "025": [68, 151], "enhanc": [68, 86, 127], "threshold": 68, "friction_depth": [68, 151], "runup": 68, "discov": 68, "expon": 68, "arithmet": 68, "3333": 68, "d0": 68, "inadequaci": 68, "ztopo": 70, "pt_chosen": 70, "protect": [70, 130], "levi": [70, 130, 151], "unset": [70, 115], "geq0": 70, "force_dry_arrai": 70, "prev_pts_chosen": 70, "unchosen": 70, "converg": [70, 81], "pts_chosen": [70, 142], "touch": 70, "preserv": [70, 78, 104], "zmask": 70, "subtleti": 70, "ruledrectangle_covering_selected_point": [70, 142], "stretch": [70, 164], "farther": 70, "cmap_land": 70, "cmap_sea": 70, "cmap_topo": 70, "norm_topo": 70, "cmap_sea_dri": 70, "cultu": 70, "bai": [70, 143, 166], "183": 70, "89871": 70, "steep": [70, 170], "fist": 70, "1e6": 70, "arbitrarili": 70, "06": [70, 151], "84800": 70, "augment": [70, 141], "163": 70, "94297": 70, "pts_chosen_shallow": 70, "177": 70, "249577": 70, "zshallow": 70, "pts_chosen_nearshor": 70, "znearshor": 70, "compact": [70, 162], "fname_fgmax_mask": 70, "fgmax_pts_topostyl": 70, "topo_fgmax_mask": 70, "fewer": [70, 115, 164], "121": [70, 142], "pad": 70, "xv": [70, 142], "yv": [70, 142], "925": 70, "965": 70, "69788": 70, "76005": 70, "barrier": [70, 109], "mathwork": 71, "manifold": 71, "isosurfac": 71, "border": [71, 167], "cube": 71, "matlabpath": 71, "perman": [71, 118, 130, 131, 132, 133, 134, 135, 136, 137], "pathtool": 71, "q0001": 71, "t0001": 71, "enter": [71, 97, 99, 105], "plotclaw1": 71, "plotclaw2": 71, "plotclaw3": 71, "_": [71, 82, 101, 102, 113, 164, 170], "setplot2": 71, "ye": 71, "success": [71, 103, 164, 167], "0625": 71, "keyboard": 71, "redraw": [71, 84], "setplot1": 71, "setplot3": 71, "Such": 71, "rho": [71, 102, 108, 150], "rhou": 71, "rhov": 71, "outputdir": 71, "plottyp": 71, "mq": 71, "uservari": 71, "uservariablefil": 71, "temporarili": 71, "encourag": 71, "daspect": 71, "showpatchbord": 71, "showgridlin": 71, "gridlin": 71, "drawcontourlin": 71, "caxi": 71, "shg": 71, "fstr": 71, "framenam": 71, "frame0000": 71, "dpng": 71, "aftergrid": 71, "topic": 71, "clawgraph": 71, "t0002": 71, "doubl": [71, 89, 94, 109, 140, 149], "xxxx": 71, "unpredict": 71, "clash": 71, "strongli": [71, 110], "overridden": [71, 104, 106], "nearbi": [72, 143], "delta": [72, 92, 94, 101, 104, 140, 164, 167, 170], "polynomi": [72, 140], "a_0": 72, "a_1x": 72, "a_2i": 72, "a_3xi": 72, "greatest": [72, 115], "midpoint": [72, 94], "conclud": 72, "intact": [74, 124], "newdir": 74, "moreov": 75, "superposit": 75, "halfspac": 75, "rock": 75, "km": [75, 143], "shallowest": 75, "orient": [75, 89], "downward": 75, "counterclockwis": 75, "hang": 75, "foot": 75, "closer": [75, 150], "instati": [75, 164], "450": 75, "e3": 75, "104": 75, "668": 75, "826": 75, "chile_dtopo": 75, "tt3": [75, 164], "arcminut": [75, 162], "simplifi": [75, 81, 82, 97, 116, 126, 127, 167], "recangl": 75, "translat": 75, "homogen": [75, 104, 167, 170], "steadi": [75, 162], "rare": [75, 125], "flat": 75, "isotrop": 75, "justifi": 75, "poisson": 75, "triangl": 75, "multicor": [76, 125], "stack": [76, 85, 123, 142], "omp_stacks": 76, "16m": 76, "ulimit": 76, "unlimit": [76, 97], "mac": [76, 85, 107, 116, 146], "max1d": [76, 130, 149], "amr_modul": [76, 115, 123, 129, 130], "somewhat": [76, 81, 115, 116, 125, 148], "safe": 76, "output_styl": [77, 88, 91, 98, 135, 139, 148, 150, 152], "output_t0": [77, 136, 139, 148, 150, 152], "elif": [77, 150, 152], "output_tim": [77, 98, 139, 148, 150], "1800": 77, "7200": 77, "iout": [77, 152], "timestep": [77, 91, 98, 124, 126, 148, 150, 152, 158], "ntot": [77, 152], "output_step_interv": [77, 148, 150, 152], "total_step": [77, 148, 150, 152], "postprocess": [77, 98], "editor": 77, "valout": [77, 127, 130, 136, 161], "40000000e": 77, "ngrid": 77, "naux": 77, "nghost": 77, "preceed": [77, 167], "grid_numb": 77, "00000000e": 77, "xlow": 77, "ylow": 77, "25000000e": 77, "former": [77, 82, 167], "cut": [77, 149], "b0002": 77, "decompos": [77, 140, 170], "contigu": [77, 97, 106, 142], "output_aux_compon": [77, 148, 150, 152], "axxxx": [77, 97], "output_aux_onlyonc": [77, 148, 150, 152], "reli": [78, 89, 100, 110, 125], "weno": [78, 96, 104], "rk": [78, 104], "cake": 79, "belki": 79, "shoot": [81, 96], "favorit": 81, "hood": [81, 96], "task": 81, "phoni": 82, "plotexampl": 82, "acou": 82, "add_true_solut": 82, "qtrue": 82, "add_titl": 82, "4e": 82, "iplotclaw_": 82, "plotloop": [82, 84], "mid": 82, "stream": 82, "inherit": [82, 94, 104], "belong": [82, 94, 99, 103, 106], "getcwd": 82, "_output2": [82, 84], "plu": [82, 119, 150, 152, 164], "duplic": [82, 122, 136, 139], "wider": 82, "preced": 82, "pinkfig": 82, "acquir": 82, "get_cmap": 82, "fade": 82, "yellow_red_blu": 82, "ffff00": 82, "rgb": 82, "predefin": 82, "showcolor": 82, "call_setplot": 82, "inadvertantli": 82, "resetplot": [82, 84], "spot": 82, "exam": 82, "pd": [82, 84], "attributeerror": 82, "traceback": 82, "new_plotfgur": 82, "mi": 82, "spell": 82, "debugg": 82, "pdb": 82, "ipdb": 82, "plot_topo_fil": [83, 123], "replot": 84, "vi": [84, 91], "recomput": [84, 88, 120, 129], "my_setplot_fil": 84, "xcode": 85, "python2": [85, 132, 137], "brew": 85, "maco": 85, "scipysuperpack": 85, "pypa": 85, "en": 85, "upgrad": 85, "Their": 86, "appreci": 86, "surviv": 86, "alphabet": 86, "programmat": 86, "petclaw": [86, 99, 100, 101, 103, 109, 111, 116], "jed": 86, "brown": [86, 164], "ondrej": 86, "lisandro": 86, "dalcin": 86, "pyweno": [86, 104], "mainten": 86, "interleav": [86, 102], "kristof": 86, "unterweg": 86, "peanoclaw": 86, "chanc": 86, "reprint": 86, "inhabit": 88, "sigma": 88, "omega": 88, "meshgrid": [88, 101, 142, 164], "exp": [88, 98, 108], "cosin": 88, "imped": [88, 102, 108], "problem_data": [88, 102, 103, 106, 108, 141], "cparam": [88, 106], "set_cparam": [88, 106], "sol": 88, "readi": [88, 89, 91, 105], "clawsolver1d": [88, 91, 94, 104, 108, 140], "bc": [88, 95, 101, 108, 150, 152, 161], "pick": [88, 104], "rp": 88, "acoustics_1d": [88, 96, 102, 108], "decid": [88, 104], "my_rp_modul": 88, "my_acoustics_rp": 88, "tvd": [88, 94, 104, 170], "vanleer": [88, 104, 148, 150, 152], "evolve_to_tim": [88, 104], "keep_copi": [88, 91, 98], "behaviour": 88, "count": 88, "count_from_zero": 88, "write_aux_init": [88, 91], "write_aux_alwai": [88, 91, 98], "compute_p": [88, 91], "accept": [88, 98, 104, 148], "stress": [88, 98], "mp": [88, 98, 106], "clawdata2pyclaw": 89, "aid": 89, "therefor": [89, 99, 127, 162], "reutil": 89, "inde": [89, 99], "computation": [89, 104], "intens": 89, "shallow_spher": [89, 116, 141], "heavili": 89, "succesfulli": 89, "initialize_sourc": 89, "src2": [89, 136, 154, 157, 167], "distutil": [89, 137], "dummi": [89, 104, 167], "queri": [89, 94, 109], "namespac": 89, "docstr": [89, 93, 116], "zp": 89, "num_ghost": [89, 94, 97, 101, 102, 104, 106, 140, 148, 150, 152], "dxc": 89, "dyc": 89, "intent": [89, 140], "cf2py": 89, "multidimension": [89, 96], "fortran_src_wrapp": 89, "xlowerg": 89, "ylowerg": 89, "whith": 89, "hoc": 89, "step2": 89, "step2qcor": 89, "qcor": 89, "two_d_classic_sourc": 89, "flux2": 89, "philim": 89, "output_filenam": 89, "input_filenam": 89, "sagemathcloud": 90, "sagemath": 90, "termin": [90, 146, 148, 149], "my_solv": 91, "my_initial_solut": 91, "entireti": 91, "check_valid": 91, "tradit": [91, 97], "run_data": 91, "f_file_nam": [91, 98], "f_path": 91, "compute_f": [91, 98], "densiti": [91, 98, 102, 106, 108, 149, 150, 167], "file_prefix_p": 91, "prepend": 91, "nstepout": [91, 98], "out_tim": 91, "outdir_p": 91, "output_file_prefix": [91, 98], "_pyclaw_io": 91, "output_opt": 91, "runmak": 91, "xdir": 91, "xclawcmd": 91, "savecod": 91, "viewable_attribut": 91, "cygwin": 91, "xclawerr": 91, "xclawout": 91, "dtdx": 92, "act": [92, 164], "num_wav": [92, 102, 140, 148, 150, 152], "07": [92, 102, 161], "minmod": [92, 94, 104, 148, 150, 152], "minmod_limit": 92, "superbe": [92, 148, 150, 152], "superbee_limit": 92, "van": [92, 104, 148, 150, 152], "leer": [92, 104, 148, 150, 152], "mc": [92, 99, 148, 150, 152], "mc_limit": 92, "beam": 92, "warm": 92, "frommm": 92, "albada": 92, "klein": 92, "sharpen": 92, "van_leer_klein_sharpening_limit": 92, "roe": [92, 102, 132, 140], "scheme": [92, 102], "arora": 92, "arora_ro": 92, "theta": 92, "95": [92, 105], "safeti": 92, "theta_limit": 92, "ultrabe": 92, "cfl_superbe": 92, "cfl_superbee_theta": 92, "beta_limit": 92, "hyperbe": 92, "hyperbee_limit": 92, "superpow": 92, "superpower_limit": 92, "cada": 92, "torrilhon": 92, "cada_torrilhon_limit": 92, "cada_torrilhon_limiter_nonlinear": 92, "1st": [92, 104, 148, 150, 152, 167], "upper_bound_limit": 92, "friedemann": 92, "kemm": 92, "kemm_2009": 92, "08": [92, 94, 161], "depdend": 92, "6666666666666666": 92, "epsilon": 92, "caut": 92, "use_petsc": [93, 99], "solver_typ": [93, 104], "shouldn": 93, "htmlplot": 93, "acoustics_1d_homogen": [93, 116], "love": [93, 140], "nearli": 94, "arg": [94, 103], "patch_index": 94, "add_dimens": 94, "get_dim_attribut": 94, "attr": [94, 103], "lower_glob": 94, "num_cells_glob": 94, "upper_glob": 94, "node": [94, 127], "unmap": 94, "set_printopt": 94, "doctest": 94, "roundoff": 94, "c_center": 94, "p_node": 94, "grid1d": 94, "c_centers_with_ghost": 94, "lambda": [94, 164], "xarr": 94, "p_center": [94, 108], "49": [94, 164], "81": [94, 142, 151], "add_gaug": [94, 98], "gauge_coord": 94, "ind": 94, "c_nodes_with_ghost": 94, "mark_nod": 94, "mark_cent": 94, "setup_gauge_fil": 94, "_compute_c_cent": 94, "c_node": 94, "_compute_c_nod": 94, "gauge_dir_nam": 94, "gauge_file_nam": 94, "gauge_fil": 94, "_compute_p_cent": 94, "_compute_p_nod": 94, "on_lower_boundari": 94, "on_upper_boundari": 94, "995": 94, "101": [94, 161], "centers_with_ghost": 94, "ndarrari": 94, "nodes_with_ghost": 94, "geom": [94, 106], "clawsolver2d": [94, 104], "dimensional_split": [94, 123, 148, 150, 152], "strang": [94, 104, 148, 150, 152, 167], "enabl": [94, 97, 98, 105, 109, 125], "unsplit": [94, 148, 150, 152], "transverse_wav": [94, 148, 150, 152], "no_tran": 94, "trans_inc": 94, "trans_cor": 94, "mthlim": [94, 104], "famili": [94, 104, 150, 152], "enumer": [94, 104], "lax": [94, 104, 148, 150, 152, 170], "wendroff": [94, 104, 148, 150, 152, 170], "source_split": [94, 104, 148, 150, 152, 167], "fwave": [94, 102, 104, 140], "step_sourc": [94, 101, 104], "kernel_languag": [94, 104, 109, 116], "callabl": [96, 109], "precompil": 96, "massiv": 96, "biggest": 96, "supercomput": [96, 98, 99], "rung": [96, 104], "kutta": [96, 104], "intuit": 96, "guidelin": 96, "pyflak": 96, "pylint": 96, "coverag": [96, 116], "advection_1d": [96, 102], "burger": [96, 140, 167], "burgers_1d": [96, 102], "euler_exact_1d": [96, 102], "euler_hll_1d": [96, 102], "euler_hllc_1d": [96, 102], "euler_roe_1d": [96, 102], "shallow_exact_1d": [96, 102], "shallow_fwave_1d": [96, 102, 141], "shallow_hll_1d": [96, 102, 141], "shallow_roe_1d": [96, 102, 141], "2nd": [96, 101, 104, 148, 150, 152, 167], "leveque1997": 96, "32": [97, 99, 107, 149], "netcdf3": 97, "netcdf4": [97, 162, 164], "read_": [97, 103], "write_": 97, "write_aux": [97, 103], "thoroughli": 97, "read_aux": [97, 103], "txxxx": 97, "qxxxx": 97, "read_arrai": 97, "num_var": 97, "read_patch_head": 97, "read_t": 97, "nstate": 97, "write_p": [97, 103], "write_arrai": 97, "why": 97, "bxxxx": 97, "h5py": 97, "pytabl": 97, "moin": 97, "whichev": 97, "wrapper": [97, 164], "hdfgroup": 97, "obtain5": 97, "lzf": 97, "szip": 97, "dataset": [97, 162, 164, 166], "deflat": 97, "compression_opt": 97, "filter": [97, 164], "legal": 97, "ec": 97, "nn": 97, "chunk": 97, "guess": 97, "shuffl": 97, "fletcher32": 97, "pupyner": 97, "effort": 97, "unidata": 97, "ucar": 97, "17": [97, 125, 126, 138, 167], "netcdf3_class": 97, "netcdf3_64bit": 97, "netcdf4_class": 97, "clobber": [97, 124], "zlib": 97, "complevel": 97, "fastest": [97, 105], "poorest": 97, "slowest": 97, "checksum": 97, "trigger": 97, "chunksiz": 97, "hdf": 97, "least_significant_digit": 97, "quantiz": 97, "lossi": 97, "significantli": [97, 127], "endian": 97, "big": 97, "nativ": 97, "gain": 97, "ness": 97, "_fillvalu": 97, "silent": 97, "customari": 98, "_outdir": 98, "hdf5": 98, "write_aux_int": 98, "energi": [98, 102], "trace": 98, "p_function": 98, "absolut": [98, 115, 116, 127, 149, 150], "mf": [98, 106], "elementwis": 98, "total_energi": 98, "tidal": [98, 143], "whenc": 98, "compute_gauge_valu": 98, "sent": [98, 106], "logger": [98, 106], "interac": 98, "silenc": 98, "gone": 98, "reject": [98, 104, 148], "problemat": 98, "shaheen": 98, "getlogg": 98, "setlevel": 98, "desktop": 99, "mainli": 99, "mpirun": [99, 105, 116], "ll": [99, 108], "toolkit": [99, 168], "petsc4pi": [99, 105, 106, 116], "mercuri": 99, "anl": 99, "hg": 99, "bitbucket": 99, "buildsystem": 99, "config": 99, "zsh": 99, "architectur": 99, "csh": 99, "tcsh": 99, "setenv": 99, "cc": [99, 102, 108], "gcc": [99, 105], "cxx": 99, "mpich": 99, "phase": [99, 110, 124, 130, 149], "googlecod": 99, "iinstal": 99, "cython": 99, "demo": 99, "petsc_hello_world": 99, "hello": 99, "easy_instal": 99, "serial": [99, 103, 109, 161], "certainli": 99, "importantli": 99, "ng": 99, "lowerg": 99, "addition": [99, 158], "excerpt": 99, "320": 99, "partit": 99, "html_plot": 100, "interactive_plot": [100, 108], "3rd": [101, 104, 141], "user_bc_low": 101, "custom_bc": 101, "dim": [101, 102, 104], "qbc": [101, 104, 106], "xrang": 101, "aux_bc_low": 101, "aux_bc_upp": 101, "auxbc": [101, 104, 106], "damiansra": 101, "empyclaw": 101, "maxwell_1d_homogen": 101, "mail": [101, 107], "worthwhil": 101, "impati": 101, "reaction": 101, "diffus": 101, "psi": [101, 167, 170], "dq_src": [101, 104], "shockbubbl": 101, "rp_sourc": 101, "rp_": 102, "q_l": [102, 140, 141], "q_r": [102, 140, 141], "aux_l": [102, 140], "aux_r": [102, 140], "oft": 102, "he": 102, "miscellan": 102, "amdq": [102, 140], "fluctuat": [102, 104, 170], "apdq": [102, 140], "ith": 102, "leveque_book_2002": 102, "matrix": 102, "acoustics_1d_pi": 102, "zz": [102, 108], "advection_1d_pi": 102, "u_t": [102, 108], "burgers_1d_pi": 102, "efix": [102, 141], "entropi": [102, 141], "euler_1d_pi": 102, "exact": 102, "hll": 102, "w_1": 102, "q_hat": 102, "s_1": [102, 142], "u_l": [102, 141], "c_l": 102, "lambda_roe_1": 102, "lambda_roe_2": 102, "w_2": 102, "s_2": [102, 142], "u_r": [102, 141], "c_r": 102, "heat": 102, "gamma1": 102, "hllc": 102, "q_hat_l": 102, "q_hat_r": 102, "s_m": 102, "w_3": 102, "s_3": 102, "p_r": 102, "p_l": 102, "rho_l": 102, "s_l": 102, "rho_r": 102, "s_r": 102, "e_l": 102, "e_r": 102, "aug_glob": 102, "26": [102, 135, 136, 138], "calucl": 102, "newton": 102, "shallow_1d_pi": [102, 141], "wari": 102, "grav": [102, 141], "dry_toler": 102, "ubar": 102, "h_l": [102, 141], "h_r": [102, 141], "cbar": [102, 164], "a1": 102, "delta_hu": 102, "delta_h": 102, "a2": 102, "karg": 103, "reachabl": 103, "truli": 103, "capa": 103, "is_valid": [103, 106], "ioerror": 103, "unsuccess": 103, "signitur": 103, "set_all_st": 103, "Will": 103, "start_fram": 103, "acoustics_2d": 104, "sharpclawsolver2d": 104, "expens": [104, 115, 120, 125], "galerkin": 104, "instantan": 104, "bubbl": 104, "clawsolv": [104, 140], "sharpclawsolv": 104, "superclass": 104, "t_end": 104, "sharpclawsolver1d": 104, "riemann_solv": 104, "claw_packag": 104, "sharpclawnd": 104, "semi": 104, "discret": 104, "dq": [104, 162], "ought": 104, "molsolv": 104, "lim_typ": 104, "weno_ord": 104, "17th": 104, "time_integr": 104, "ssp33": 104, "strong": [104, 110], "shu": 104, "osher": 104, "ssp104": 104, "4th": 104, "ssplmm32": 104, "multistep": 104, "ssplmm43": 104, "ssprk22": 104, "butcher": 104, "lmm": 104, "char_decomp": 104, "characterist": 104, "transmiss": 104, "tfluct_solv": 104, "tfluct": 104, "default_tfluct": 104, "aux_time_dep": 104, "cfl_desir": [104, 148, 150, 152], "cfl_max": [104, 148, 150, 152], "call_before_step_each_stag": 104, "before_step": 104, "stage": [104, 143, 144, 162, 164], "accept_reject_step": 104, "check_3rd_ord_cond": 104, "step_index": 104, "dtfe": 104, "ssplmm": 104, "posteriori": 104, "violat": [104, 164], "muct": 104, "dqdt": 104, "get_dt_new": 104, "take_one_step": 104, "update_saved_valu": 104, "check_lmm_cond": 104, "0001": 104, "max_step": 104, "500": [104, 149, 152], "get_dt": 104, "succeed": 104, "step_hyperbol": 104, "my_custom_bc": 104, "soon": 104, "bc_arrai": 104, "difficulti": [105, 107, 111], "modern": [105, 118, 127, 140], "gnu": 105, "ibm": 105, "xlf": 105, "wiki": 105, "gfortranbinari": 105, "ce": 105, "enthought": [105, 107], "canopi": 105, "live": 106, "constructor": 106, "get_aux_glob": 106, "get_auxbc_from_aux": 106, "get_q_glob": 106, "get_qbc_from_q": 106, "set_aux_from_auxbc": 106, "fortran_modul": 106, "seem": [106, 111, 130, 147, 154], "fragil": 106, "interdepend": 106, "set_num_ghost": 106, "set_q_from_qbc": 106, "gauge_data": 106, "keep_gaug": 106, "hack": 106, "stencil_width": 106, "da": 106, "stencil": 106, "worth": 106, "temporari": 106, "processor": 106, "fset": 106, "consult": 107, "g77": 107, "undefin": 107, "bash_profil": [107, 146], "academ": 107, "epd": 107, "ordinarili": 107, "kappa": [108, 170], "eqnarrai": 108, "p_t": 108, "u_x": 108, "p_x": 108, "tipe": 108, "haven": [108, 110], "deepli": 108, "acquaint": 108, "framecount": 109, "counter": [109, 164], "get_count": 109, "reset_count": 109, "set_count": 109, "new_frame_num": 109, "verifyerror": 109, "add_parent_doc": 109, "check_diff": [109, 116], "abstol": 109, "reltol": 109, "compile_librari": 109, "source_list": 109, "module_nam": 109, "interface_funct": 109, "local_path": 109, "library_path": 109, "f2py_flag": 109, "ioexcept": 109, "f95": 109, "lgomp": 109, "o3": 109, "funrol": 109, "finlin": 109, "fdefault": 109, "construct_function_handl": 109, "function_nam": 109, "func": [109, 158], "convert_fort_double_to_float": 109, "0d0": 109, "gen_vari": [109, 116], "disable_petsc": 109, "runnabl": 109, "kernel": 109, "against": [109, 116, 124, 160], "test_app": [109, 116], "unrecogn": 109, "read_data_lin": 109, "inputfil": [109, 164], "num_entri": 109, "data_typ": 109, "run_app_from_main": 109, "run_seri": 109, "fun": 109, "decor": 109, "comm_world": 109, "check_valu": [109, 116], "januari": [110, 117, 125, 138], "ceas": 110, "python3stat": 110, "howto": 110, "pyport": 110, "bewar": [111, 164], "__file__": 111, "subpackag": 111, "_subpackag": 111, "forestclaw": [111, 123], "getusersitepackag": 111, "getsitepackag": 111, "bad": [111, 116], "harm": 111, "drawback": 111, "cmdline": 111, "echo": 111, "perturb": [112, 151, 162], "workshop": [113, 130], "ik": 113, "basin": 113, "distant": [113, 115], "parameter": [113, 127, 142, 151, 158, 159], "_surge_modul": 113, "workflow": [113, 153, 158], "concentr": 113, "hurrican": [113, 158], "katrina": 113, "directorti": 113, "orlean": 113, "atcf": [113, 127, 158, 159], "chile2010b": 114, "topotools_exampl": [114, 164], "regrid_interv": [115, 149, 150], "surround": [115, 164], "escap": [115, 150], "regrid_buffer_width": [115, 149, 150], "tradeoff": 115, "clustering_cutoff": [115, 149, 150], "amrnez": 115, "undivid": 115, "q_": [115, 140, 170], "divid": [115, 148], "exceed": [115, 127], "largest": [115, 143], "suppli": [115, 158, 167, 170], "constrain": 115, "forbidden": 115, "amrflag": 115, "doflag": 115, "dontflag": 115, "adjoint_flag": 115, "tolsp": 115, "errest": 115, "anywher": 115, "wave_toler": [115, 151], "perfom": 116, "yml": 116, "_output_old": 116, "_output_new": 116, "xxdiff": 116, "opendiff": 116, "_plots_old": 116, "_plots_new": 116, "discoveri": 116, "supplementari": 116, "prime": 116, "stdout": 116, "spawn": 116, "occasion": [116, 125], "failur": [116, 128, 144], "acoustics_3d_vari": 116, "combinatori": 116, "test_acoust": 116, "comprehens": 116, "test_shallow_spher": 116, "novemb": [118, 124, 125, 137, 138], "meson": [118, 137], "sphere_sourc": [118, 136, 137, 154], "checkpt_styl": [118, 124, 139, 148, 150], "granular": 118, "clawpack_tan": 118, "imshow_norm": 118, "imshow_alpha": 118, "facet": 118, "mpeg": 118, "movi": 118, "ffmpeg": 118, "mp4_movi": 118, "movie_fign": 118, "mp4": 118, "jsanim": [118, 119, 123, 135], "gif": 118, "movie_name_prefix": 118, "chile2010_": 118, "movie_": 118, "chile2010_fign": 118, "kill": 118, "enddo": [118, 167], "storag": [118, 124, 132], "topo_modul": 118, "ntogo": 118, "di": [118, 119], "cleanup": [118, 126], "ipython_displai": 119, "underflow": 119, "nest": [119, 125, 149, 150], "refactor": [119, 120, 121, 123, 125, 126, 128, 132], "geolib": [119, 123], "dtopo_modul": 119, "movetopo": 119, "cellgridintegr": 119, "topo_upd": 119, "cellgridintegrate2": 119, "dt_max_dtopo": [119, 151], "dt_initi": [119, 148, 150, 151, 152], "juli": [120, 121, 138], "nohup": 120, "recalcul": 120, "unnecessarili": 120, "clamshel": 120, "test_topotool": [120, 164], "octob": [121, 122, 123, 129, 130, 133, 134, 136, 137, 138], "dtdx1d": 121, "dtdy1d": 121, "jsanimation_frametool": 121, "rpn2_vc_advect": 121, "dtdtopo": 122, "refinementdata": 122, "ticklabel": 122, "114": 122, "didn": 122, "glitch": 122, "nbtool": 123, "formerli": 123, "makefile_kml": 123, "extran": 123, "compare_gaug": 123, "topoplotdata": 123, "favor": [123, 127, 137, 149, 164], "riemann_tool": [123, 141], "amrlib": 123, "dumpgaug": 123, "stepgrid_dimsplit": 123, "step2x": 123, "step2i": 123, "flux2_dimsplit": 123, "step3x": 123, "step3i": 123, "step3z": 123, "flux3_dimsplit": 123, "advection_3d_swirl": [123, 161], "advection_2d_inflow": 123, "allocat": 123, "igetsp": 123, "holland_storm_modul": 123, "stommel_storm_modul": 123, "constant_storm_modul": 123, "storm_modul": 123, "friction_modul": 123, "geoclaw_modul": 123, "consolid": 123, "amr_data_show": 124, "datadir": 124, "riemann_interact": 124, "nbviewer": 124, "maojr": 124, "ipynotebook": 124, "blob": [124, 141], "interactive_test": 124, "unstabl": 124, "guard": 124, "crash": [124, 148, 149], "chk00100": 124, "tck00100": 124, "chkaaaaa": 124, "tckaaaaa": 124, "chkbbbbb": 124, "tckbbbbb": 124, "tck": 124, "chk": 124, "flush": 124, "lose": 124, "unneed": 124, "spend": 124, "inconsist": 124, "__future__": 125, "absolute_import": 125, "print_funct": 125, "capabilit": 125, "num_proc": 125, "coupl": [125, 170], "instabl": [125, 132], "transon": 125, "insidi": 125, "enlarg": 125, "june": [126, 127, 128, 129, 138], "woodward": 126, "collela": 126, "blast": 126, "219": 126, "legend_tool": 126, "legend": [126, 142], "riemann_aug_jcp": 126, "geoclaw_riemann_util": 126, "challeng": 126, "timer": 126, "gradient": [126, 170], "xllower": 127, "yllower": 127, "capabili": 127, "landfal": 127, "highli": [127, 144], "code_of_conduct": 127, "conduct": 127, "plot_timing_stat": [127, 129], "226": 127, "cumul": 127, "maxgr": 127, "rnode": 127, "listofgrid": 127, "10000": [127, 164], "resiz": 127, "10k": 127, "bndlist": 127, "amr_2d": [127, 128], "nodal": 127, "owner": 127, "lookup": 127, "rearrang": 127, "303": 127, "capabilti": 127, "hurdat": [127, 158, 159], "jma": [127, 158, 159], "ibtrac": [127, 158], "tcvital": [127, 158, 159], "wind": [127, 151, 158, 159, 164], "holland": [127, 151, 159], "1980": [127, 151, 159], "stub": 127, "establis": 127, "hwrf": [127, 151, 159], "mimic": 127, "test_etopo1": [127, 162], "etopotool": [127, 162], "etopo1": [127, 142, 143, 162, 164, 166], "gave": 127, "incorrect": [127, 128, 144, 158], "308": 127, "287": 127, "hlle": 128, "adjoint_modul": 128, "amr_1d": 128, "adjointsup_modul": 128, "robustli": 128, "maketopo": [128, 162], "typo": 128, "subprocess": 129, "staff": 129, "timing_plot": 129, "mhd": 129, "faster": [129, 130, 132, 164], "clearer": [129, 132, 133], "topo_miss": 129, "bowl": 129, "slosh": 129, "3764278": [130, 138], "among": 130, "bzip2": 130, "unpack": 130, "get_remote_fil": [130, 164], "notebook_html": 130, "nbconvert": 130, "animation_tool": [130, 131], "ride": 130, "skip_patches_outside_xylimit": [130, 132], "ruled_rectangl": 130, "lagrangian_gaug": 130, "million": 130, "set_eta_init": [130, 144], "subsid": [130, 144, 151], "uplift": [130, 144, 151], "septemb": [131, 138], "4025432": [131, 138], "weren": 131, "verbosity_regrid": [131, 149, 150], "2021": [132, 133, 134, 135, 138], "4503024": [132, 138], "memsiz": [132, 149], "implicitli": [132, 151], "rpt2_geoclaw": [132, 141], "unnecessari": 132, "prepc": 132, "thought": [132, 143], "advertis": 132, "topotyp": [132, 151, 162], "5595424": [133, 138], "rp1_shallow_hl": 133, "geotiff": 133, "decemb": [134, 135, 138], "5781749": [134, 138], "segment": [134, 142], "2022": [135, 136, 138], "7026045": [135, 138], "trucat": 135, "svg": 135, "pcolor_kwarg": 135, "286": 135, "to_jshtml": 135, "8400237": [136, 138], "claw_python": 136, "pytest": 136, "add_attribut": 136, "cmd": 136, "fgmax_fin": 136, "fgmaxdata": 136, "compabl": 136, "xxx": [137, 162], "redon": 137, "fixed_grid_data": 137, "10076317": 138, "3528429": 138, "3237295": 138, "1405834": 138, "262111": 138, "50982": 138, "tchknnnnn": 139, "chknnnnn": [139, 148, 150, 152], "nnnnn": [139, 148], "containt": 139, "restart_fil": [139, 148, 150, 152], "commenc": 139, "undesir": 139, "fashion": 139, "traffic": [140, 167], "rp1": [140, 170], "maxm": 140, "ql": 140, "qr": 140, "auxl": 140, "auxr": 140, "mwave": 140, "q_i": [140, 170], "x_": [140, 170], "ell": 140, "cal": [140, 167, 170], "p_": [140, 170], "_ptwise": 140, "rp1_ptwise": 140, "rpn2_ptwise": 140, "rpt2_ptwise": 140, "har": 140, "x_i": [140, 167, 170], "jacobian": [140, 170], "use_fwav": [140, 148, 150, 152], "my_riemann_solv": 140, "solver_nam": 140, "sole": 140, "bmatrix": 141, "graviti": [141, 151], "rp1_shallow_roe_with_efix": 141, "shallow_roe_with_efix_1d": 141, "shallow_1d": 141, "dam_break": 141, "passiv": 141, "rp1_shallow_roe_trac": 141, "shallow_roe_tracer_1d": 141, "shallow_trac": 141, "rp1_shallow_bathymetry_fwav": 141, "shallow_bathymetry_fwave_1d": 141, "sill": 141, "rpn2_shallow_roe_with_efix": 141, "rpt2_shallow_roe_with_efix": 141, "shallow_roe_with_efix_2d": 141, "shallow_2d": 141, "radial_dam_break": 141, "rpn2_shallow_bathymetry_fwav": 141, "shallow_bathymetry_fwave_2d": 141, "rpn2_shallow_spher": 141, "rpt2_shallow_spher": 141, "shallow_sphere_2d": 141, "rossby_wav": 141, "costli": 141, "rpn2_geoclaw": 141, "sw_aug_2d": 141, "rpn2_sw_aug": 141, "reval": 141, "riemann_solut": 141, "plot_phas": 141, "inclus": 142, "union": [142, 162], "y_": 142, "scriptstyl": 142, "x_c": 142, "y_c": 142, "ldot": 142, "unequ": 142, "vstack": 142, "31": 142, "zm": 142, "rrzigzag": 142, "rr2": 142, "readlin": 142, "strip": [142, 164], "nrule": 142, "000000000": 142, "admiralti": 142, "inlet": 142, "kitsap": 142, "peninsula": 142, "strait": 142, "juan": 142, "fuca": 142, "ruledrectangle_admiraltyinlet": 142, "400": 142, "851": 142, "529": 142, "036": 142, "578": 142, "577": 142, "187": 142, "623": 142, "191": 142, "684": 142, "221": 142, "755": 142, "rr_admiralti": 142, "rr_name": 142, "compactli": 142, "enforc": 142, "x_center": 142, "y_center": 142, "logical_or": 142, "edgecolor": 142, "dark": 142, "loc": [142, 164], "129": 142, "degener": 142, "vancouv": 142, "shoal": 142, "inundataion": [143, 166], "relief": [143, 166], "msl": [143, 166], "hilo": [143, 166], "feet": [143, 166], "arc": 143, "presum": 143, "vastli": 143, "fall": [143, 151], "mhhw": 143, "astronom": 143, "aht": 143, "worst": 143, "spacial": 144, "variable_eta_init": [144, 151], "nearfield": 144, "steepli": 144, "siesmic": 144, "eta_init": 144, "ever": [147, 151], "ff9999": 147, "claw_pkg": [148, 149, 150, 151, 152], "analog": [148, 149], "capa_index": [148, 150, 152], "dt_variabl": [148, 150, 152], "output_q_compon": [148, 150, 152], "unsur": 148, "lenght": 148, "dt_max": [148, 150, 152], "stiff": 148, "retak": [148, 150, 152], "contamin": 148, "500000": 148, "steps_max": [148, 150, 152], "infinit": 148, "donor": [148, 150, 152], "upwind": 148, "transmit": 148, "transport": [148, 150, 152], "tranpsort": 148, "central": [148, 158, 159], "decomposit": 148, "srcn": [148, 167], "hyperol": 148, "src_split": [148, 150, 152], "thn": 148, "harder": 148, "checkpt_tim": [148, 150], "checkpt_interv": [148, 150], "refinement_ratios_x": [149, 150], "refinement_ratios_t": [149, 150, 151], "variable_dt_refinement_ratio": [149, 151], "xleft": [149, 150], "yleft": [149, 150], "travel": 149, "pt": [149, 150], "forbiddn": 149, "omp": 149, "spent": [149, 161], "1048575": 149, "4194303": 149, "8388607": 149, "dprint": [149, 150], "eprint": [149, 150], "edebug": [149, 150], "gprint": [149, 150], "bisect": [149, 150], "nprint": [149, 150], "pprint": [149, 150], "rprint": [149, 150], "sprint": [149, 150], "tprint": [149, 150], "uprint": [149, 150], "upbnd": [149, 150], "acoustics_2d_radi": [150, 167], "assert": [150, 152], "probdata": [150, 152], "new_userdata": [150, 152], "add_param": [150, 152], "medium": [150, 167], "000000e": 150, "000000": 150, "chk00006": [150, 152], "ntime": 150, "step_interv": 150, "00000e": 150, "900000": 150, "50000": 150, "amr_level_max": 150, "auxtyp": 150, "001000e": 150, "alg": 150, "toggl": 150, "err": 150, "est": 150, "proj": 150, "__name__": [150, 152], "__main__": [150, 152], "argv": [150, 152], "setrun_setgeo": 151, "refinement_data": 151, "speed_toler": 151, "earth_radiu": 151, "6367": 151, "5e3": 151, "friction_forc": 151, "manning_coeffici": 151, "delin": 151, "manning_break": 151, "file1info": 151, "file2info": 151, "dtopotyp": [151, 162], "qinit_typ": [151, 162], "qinitfil": 151, "qinitdata": 151, "coseism": 151, "surge_data": 151, "wind_forc": 151, "drag": 151, "drag_law": 151, "deterimin": [151, 164], "garret": 151, "powel": 151, "pressure_forc": 151, "wind_index": 151, "pressure_index": 151, "display_landfall_tim": 151, "wind_refin": 151, "r_refin": 151, "storm_specification_typ": 151, "chava": 151, "lin": 151, "emmanuel": 151, "storm_fil": [151, 158], "storm_specif": 151, "classic4": 152, "tout": 152, "javascript": 153, "publicli": 153, "develp": 154, "tropic": 154, "polar": 154, "variat": 154, "circumst": 154, "src1d": 157, "src3": [157, 167], "ensembl": 158, "my_storm": 158, "my_geoclaw_storm": 158, "imd": [158, 159], "nodataerror": 158, "nhc": 158, "japanes": 158, "meterolog": 158, "indian": 158, "meteorlog": 158, "datetiem": 158, "time_offset": 158, "eye_loc": 158, "ey": [158, 159], "decimc": 158, "max_wind_spe": 158, "max_wind_radiu": 158, "central_pressur": 158, "storm_radiu": 158, "iso": 158, "wind_spe": 158, "34kt": 158, "50kt": 158, "64kt": 158, "radii": 158, "categori": 158, "categor": 158, "cat_nam": 158, "car_nam": 158, "read_atcf": 158, "read_geoclaw": 158, "human": 158, "readabl": [158, 159], "read_hurdat": 158, "aoml": 158, "hrd": 158, "data_storm": 158, "single_storm": 158, "risen": 158, "read_ibtrac": 158, "sid": 158, "storm_nam": 158, "start_dat": 158, "agency_pref": 158, "wmo": 158, "usa": 158, "tokyo": 158, "newdelhi": 158, "reunion": 158, "bom": 158, "nadi": 158, "wellington": 158, "cma": 158, "hko": 158, "ds824": 158, "td9636": 158, "td9635": 158, "neumann": 158, "mlc": 158, "v4": 158, "unnam": 158, "wmo_": 158, "wmo_ag": 158, "usa_ag": 158, "closest": 158, "read_imd": 158, "read_jma": 158, "jp": 158, "eng": 158, "rsmc": 158, "hp": 158, "eg": 158, "besttrack": 158, "e_format_bst": 158, "read_tcvit": 158, "write_atcf": 158, "write_geoclaw": 158, "max_wind_radius_fil": 158, "storm_radius_fil": 158, "forecast": 158, "redund": 158, "write_hurdat": 158, "write_imd": 158, "write_jma": 158, "write_tcvit": 158, "available_format": 158, "available_model": 158, "fill_rad_w_other_sourc": 158, "storm_targ": 158, "interp_kwarg": 158, "tri": 158, "storm_ibtrac": 158, "path_to_ibtrac": 158, "2018300n26315": 158, "storm_atcf": 158, "path_to_atcf": 158, "fill_mwr": 158, "out_path": 158, "make_multi_structur": 158, "observerd": 159, "parametr": 159, "gride": 159, "dens": 159, "profil": [159, 164], "_storm_modul": 159, "stepgrid": 161, "850": 161, "853": 161, "288e": 161, "214": 161, "552": 161, "373e": 161, "92": 161, "774": 161, "370": 161, "259": 161, "260e": 161, "108": 161, "838": 161, "414": 161, "664": 161, "301e": 161, "440": 161, "392": 161, "473": 161, "014": 161, "801": 161, "508": 161, "447": 161, "413": 161, "402": 161, "483": 161, "472": 161, "470": 161, "85": 161, "uniformli": 162, "nw": 162, "deduc": 162, "input_path": 162, "output_path": 162, "nodatav": 162, "northernmost": 162, "west": 162, "convens": 162, "subsurfac": 162, "gigabyt": 162, "remote_topo_url": [162, 164], "topo1": 162, "navd88": 162, "determine_topo_typ": 164, "create_topo_func": 164, "topo1writ": 164, "topo2writ": 164, "topo3writ": 164, "swaphead": 164, "capab": 164, "mayb": 164, "in_poli": 164, "topo_func": 164, "unstructur": 164, "topo_fil": 164, "filter_region": 164, "generate_2d_topo": 164, "rai": 164, "cast": 164, "versu": 164, "arrang": 164, "x_mask": 164, "maskedarrai": 164, "interp_unstructur": 164, "fill_topo": 164, "delta_limit": 164, "no_data_valu": 164, "buffer_length": 164, "proximity_radiu": 164, "resolution_limit": 164, "gap": 164, "griddata": 164, "delta_x": 164, "delta_i": 164, "make_shoreline_xi": 164, "shoreline_xi": 164, "segement": 164, "npy": 164, "reload": 164, "long_lat": 164, "cb_kwarg": 164, "linestyl": 164, "compens": 164, "shrink": 164, "nc_param": 164, "read_head": 164, "swap": 164, "replace_no_data_valu": 164, "replace_valu": 164, "smooth_data": 164, "ball": 164, "inf": 164, "oscillatori": 164, "header_styl": 164, "7e": 164, "infer": 164, "arcgi": 164, "asc": 164, "millimet": 164, "15e": 164, "7i": 164, "coorind": 164, "specfi": 164, "topgraphi": 164, "__________________o": 164, "fetch_topo_url": 164, "local_fnam": 164, "ask_us": 164, "get_topo": 164, "claw_topo_download": 164, "run_exampl": 164, "topo_fnam": 164, "remote_directori": 164, "zvar": 164, "return_topo": 164, "return_xarrai": 164, "band1": 164, "xarrai": 164, "xarray_d": 164, "etopo_sample_2min": 164, "0f": 164, "western": 164, "outputfil": 164, "outfil": 164, "nxpoint": 164, "nypoint": 164, "topotype1": 164, "99999": 164, "forget": 165, "whichclaw": 165, "gnufcompil": 165, "tarbal": 165, "config_fc": 165, "fcompil": 165, "printenv": 165, "154": 165, "wc": 166, "catalog": 166, "mllw": 166, "gloss": 166, "sonel": 166, "mbc": 167, "5d0": 167, "heterogen": 167, "b4stepn": 167, "advection_2d_swirl": 167, "1drad": 167, "mx1d": 167, "q1d": 167, "aux1d": 167, "reader": 168, "time_files_scanf": 168, "04d": 168, "grid_files_scanf": 168, "silo": 168, "vm": 169, "equiv": 170, "m_w": 170, "sum_": 170, "sum_p": 170, "qquad": 170, "nonconserv": 170, "eqn": 170, "claw_1dnoncon": 170, "tild": 170, "f_": 170, "kappa_i": 170}, "objects": {"": [[0, 0, 1, "", "ClawPlotAxes"], [1, 0, 1, "", "ClawPlotData"], [2, 0, 1, "", "ClawPlotFigure"], [3, 0, 1, "", "ClawPlotItem"], [1, 2, 1, "", "clearfigures"], [1, 2, 1, "", "clearframes"], [1, 2, 1, "", "getaxes"], [1, 2, 1, "", "getfigure"], [3, 2, 1, "", "getframe"], [3, 2, 1, "", "gethandle"], [1, 2, 1, "", "getitem"], [1, 2, 1, "", "iplotclaw"], [2, 2, 1, "", "new_plotaxes"], [1, 2, 1, "", "new_plotfigure"], [0, 2, 1, "", "new_plotitem"], [1, 2, 1, "", "plotframe"], [1, 2, 1, "", "printframes"], [1, 2, 1, "", "showitems"]], "clawpack.geoclaw": [[32, 1, 0, "-", "dtopotools"], [35, 1, 0, "-", "fgmax_tools"], [37, 1, 0, "-", "fgout_tools"], [63, 1, 0, "-", "kmltools"], [164, 1, 0, "-", "topotools"], [51, 1, 0, "-", "util"]], "clawpack.geoclaw.dtopotools": [[32, 0, 1, "", "CSVFault"], [32, 0, 1, "", "DTopography"], [32, 0, 1, "", "DTopography1d"], [32, 0, 1, "", "Fault"], [32, 0, 1, "", "Fault1d"], [32, 3, 1, "", "Mw"], [32, 0, 1, "", "SiftFault"], [32, 0, 1, "", "SubFault"], [32, 0, 1, "", "SubFault1d"], [32, 0, 1, "", "SubdividedPlaneFault"], [32, 0, 1, "", "TensorProductFault"], [32, 0, 1, "", "UCSBFault"], [32, 3, 1, "", "plot_dZ_colors"], [32, 3, 1, "", "plot_dZ_contours"], [32, 3, 1, "", "rise_fraction"], [32, 3, 1, "", "strike_direction"]], "clawpack.geoclaw.dtopotools.CSVFault": [[32, 2, 1, "", "read"]], "clawpack.geoclaw.dtopotools.DTopography": [[32, 2, 1, "", "dZ_at_t"], [32, 2, 1, "", "dZ_max"], [32, 2, 1, "", "plot_dZ_colors"], [32, 2, 1, "", "plot_dZ_contours"], [32, 2, 1, "", "read"], [32, 2, 1, "", "write"]], "clawpack.geoclaw.dtopotools.DTopography1d": [[32, 2, 1, "", "dZ_at_t"], [32, 2, 1, "", "dZ_cellave_at_t"], [32, 2, 1, "", "read"], [32, 2, 1, "", "write"]], "clawpack.geoclaw.dtopotools.Fault": [[32, 2, 1, "", "Mo"], [32, 2, 1, "", "Mw"], [32, 2, 1, "", "containing_rect"], [32, 2, 1, "", "create_dtopo_xy"], [32, 2, 1, "", "create_dtopography"], [32, 2, 1, "", "plot_subfaults"], [32, 2, 1, "", "plot_subfaults_depth"], [32, 2, 1, "", "read"], [32, 2, 1, "", "set_dynamic_slip"], [32, 2, 1, "", "write"]], "clawpack.geoclaw.dtopotools.SiftFault": [[32, 2, 1, "", "set_subfaults"]], "clawpack.geoclaw.dtopotools.SubFault": [[32, 2, 1, "", "Mo"], [32, 2, 1, "", "calculate_geometry"], [32, 2, 1, "", "calculate_geometry_triangles"], [32, 4, 1, "", "centers"], [32, 2, 1, "", "convert_to_standard_units"], [32, 5, 1, "", "coordinate_specification"], [32, 4, 1, "", "corners"], [32, 5, 1, "", "depth"], [32, 5, 1, "", "dip"], [32, 2, 1, "", "dynamic_slip"], [32, 4, 1, "", "gauss_pts"], [32, 5, 1, "", "latitude"], [32, 5, 1, "", "length"], [32, 5, 1, "", "longitude"], [32, 5, 1, "", "mu"], [32, 2, 1, "", "okada"], [32, 5, 1, "", "rake"], [32, 5, 1, "", "rise_shape"], [32, 5, 1, "", "rise_time"], [32, 5, 1, "", "rise_time_starting"], [32, 5, 1, "", "rupture_time"], [32, 5, 1, "", "rupture_type"], [32, 2, 1, "", "set_corners"], [32, 5, 1, "", "slip"], [32, 5, 1, "", "strike"], [32, 5, 1, "", "width"]], "clawpack.geoclaw.dtopotools.SubFault1d": [[32, 5, 1, "", "coordinate_specification"], [32, 5, 1, "", "latitude"], [32, 5, 1, "", "length"], [32, 5, 1, "", "longitude"], [32, 5, 1, "", "rake"], [32, 5, 1, "", "strike"]], "clawpack.geoclaw.dtopotools.SubdividedPlaneFault": [[32, 2, 1, "", "subdivide"]], "clawpack.geoclaw.dtopotools.UCSBFault": [[32, 2, 1, "", "read"]], "clawpack.geoclaw.fgmax_tools": [[35, 0, 1, "", "FGmaxGrid"], [35, 3, 1, "", "adjust_fgmax_1d"]], "clawpack.geoclaw.fgmax_tools.FGmaxGrid": [[35, 2, 1, "", "bounding_box"], [35, 2, 1, "", "interp_dz"], [35, 2, 1, "", "ps4_to_arrays"], [35, 2, 1, "", "read_fgmax_grids_data"], [35, 2, 1, "", "read_output"], [35, 2, 1, "", "write_to_fgmax_data"]], "clawpack.geoclaw.fgout_tools": [[37, 0, 1, "", "FGoutFrame"], [37, 0, 1, "", "FGoutGrid"], [37, 3, 1, "", "get_as_array"], [37, 3, 1, "", "make_fgout_fcn_xy"], [37, 3, 1, "", "make_fgout_fcn_xyt"], [37, 3, 1, "", "print_netcdf_info"], [37, 3, 1, "", "read_netcdf"], [37, 3, 1, "", "read_netcdf_arrays"], [37, 3, 1, "", "write_netcdf"]], "clawpack.geoclaw.fgout_tools.FGoutFrame": [[37, 4, 1, "", "B"], [37, 4, 1, "", "eta"], [37, 4, 1, "", "h"], [37, 4, 1, "", "hss"], [37, 4, 1, "", "hu"], [37, 4, 1, "", "hv"], [37, 4, 1, "", "s"], [37, 4, 1, "", "u"], [37, 4, 1, "", "v"]], "clawpack.geoclaw.fgout_tools.FGoutGrid": [[37, 4, 1, "", "X"], [37, 4, 1, "", "Y"], [37, 4, 1, "", "extent_centers"], [37, 4, 1, "", "extent_edges"], [37, 2, 1, "", "read_fgout_grids_data"], [37, 2, 1, "", "read_frame"], [37, 2, 1, "", "set_plotdata"], [37, 2, 1, "", "write_to_fgout_data"], [37, 4, 1, "", "x"], [37, 4, 1, "", "y"]], "clawpack.geoclaw.kmltools": [[63, 3, 1, "", "box2kml"], [63, 3, 1, "", "deg2dms"], [63, 3, 1, "", "dtopo2kml"], [63, 3, 1, "", "f2s"], [63, 3, 1, "", "fgmax2kml"], [63, 3, 1, "", "fgout2kml"], [63, 3, 1, "", "gauges2kml"], [63, 3, 1, "", "kml_build_colorbar"], [63, 3, 1, "", "kml_cb"], [63, 3, 1, "", "kml_png"], [63, 3, 1, "", "kml_timespan"], [63, 3, 1, "", "line2kml"], [63, 3, 1, "", "make_input_data_kmls"], [63, 3, 1, "", "pcolorcells_for_kml"], [63, 3, 1, "", "png2kml"], [63, 3, 1, "", "poly2kml"], [63, 3, 1, "", "quad2kml"], [63, 3, 1, "", "regions2kml"], [63, 3, 1, "", "topo2kml"], [63, 3, 1, "", "topo2kmz"], [63, 3, 1, "", "transect2kml"]], "clawpack.geoclaw.surge": [[158, 1, 0, "-", "storm"]], "clawpack.geoclaw.surge.storm": [[158, 6, 1, "", "NoDataError"], [158, 0, 1, "", "Storm"], [158, 3, 1, "", "available_formats"], [158, 3, 1, "", "available_models"], [158, 3, 1, "", "fill_rad_w_other_source"], [158, 3, 1, "", "make_multi_structure"]], "clawpack.geoclaw.surge.storm.Storm": [[158, 2, 1, "", "category"], [158, 2, 1, "", "read"], [158, 2, 1, "", "read_atcf"], [158, 2, 1, "", "read_geoclaw"], [158, 2, 1, "", "read_hurdat"], [158, 2, 1, "", "read_ibtracs"], [158, 2, 1, "", "read_imd"], [158, 2, 1, "", "read_jma"], [158, 2, 1, "", "read_tcvitals"], [158, 2, 1, "", "write"], [158, 2, 1, "", "write_atcf"], [158, 2, 1, "", "write_geoclaw"], [158, 2, 1, "", "write_hurdat"], [158, 2, 1, "", "write_imd"], [158, 2, 1, "", "write_jma"], [158, 2, 1, "", "write_tcvitals"]], "clawpack.geoclaw.topotools": [[164, 0, 1, "", "Topography"], [164, 3, 1, "", "create_topo_func"], [164, 3, 1, "", "determine_topo_type"], [164, 3, 1, "", "fetch_topo_url"], [164, 3, 1, "", "get_topo"], [164, 3, 1, "", "read_netcdf"], [164, 3, 1, "", "swapheader"], [164, 3, 1, "", "topo1writer"], [164, 3, 1, "", "topo2writer"], [164, 3, 1, "", "topo3writer"]], "clawpack.geoclaw.topotools.Topography": [[164, 4, 1, "", "X"], [164, 4, 1, "", "Y"], [164, 4, 1, "", "Z"], [164, 2, 1, "", "crop"], [164, 4, 1, "", "delta"], [164, 4, 1, "", "extent"], [164, 2, 1, "", "generate_2d_coordinates"], [164, 2, 1, "", "generate_2d_topo"], [164, 2, 1, "", "in_poly"], [164, 2, 1, "", "interp_unstructured"], [164, 2, 1, "", "make_shoreline_xy"], [164, 2, 1, "", "plot"], [164, 2, 1, "", "read"], [164, 2, 1, "", "read_header"], [164, 2, 1, "", "replace_no_data_values"], [164, 2, 1, "", "replace_values"], [164, 2, 1, "", "set_xyZ"], [164, 2, 1, "", "smooth_data"], [164, 2, 1, "", "write"], [164, 4, 1, "", "x"], [164, 4, 1, "", "y"], [164, 4, 1, "", "z"]], "clawpack.geoclaw.util": [[51, 3, 1, "", "bearing"], [51, 3, 1, "", "dist_latlong2meters"], [51, 3, 1, "", "dist_meters2latlong"], [51, 3, 1, "", "dms2decimal"], [51, 3, 1, "", "fetch_noaa_tide_data"], [51, 3, 1, "", "gctransect"], [51, 3, 1, "", "haversine"], [51, 3, 1, "", "inv_haversine"]], "clawpack.petclaw.geometry": [[94, 0, 1, "", "Domain"], [94, 0, 1, "", "Patch"]], "clawpack.petclaw.geometry.Domain": [[94, 5, 1, "", "dimensional_split"], [94, 5, 1, "", "fwave"], [94, 5, 1, "", "kernel_language"], [94, 5, 1, "", "mthlim"], [94, 5, 1, "", "order"], [94, 5, 1, "", "source_split"], [94, 5, 1, "", "step_source"], [94, 5, 1, "", "transverse_waves"], [94, 5, 1, "", "verbosity"]], "clawpack.petclaw.state": [[106, 0, 1, "", "State"]], "clawpack.petclaw.state.State": [[106, 4, 1, "", "F"], [106, 4, 1, "", "aux"], [106, 4, 1, "", "fset"], [106, 5, 1, "", "gauge_data"], [106, 2, 1, "", "get_aux_global"], [106, 2, 1, "", "get_auxbc_from_aux"], [106, 2, 1, "", "get_q_global"], [106, 2, 1, "", "get_qbc_from_q"], [106, 5, 1, "", "keep_gauges"], [106, 4, 1, "", "mF"], [106, 4, 1, "", "mp"], [106, 4, 1, "", "num_aux"], [106, 4, 1, "", "num_eqn"], [106, 4, 1, "", "p"], [106, 5, 1, "", "problem_data"], [106, 4, 1, "", "q"], [106, 2, 1, "", "set_num_ghost"], [106, 5, 1, "", "t"]], "clawpack.pyclaw.classic.solver": [[104, 0, 1, "", "ClawSolver"]], "clawpack.pyclaw.classic.solver.ClawSolver": [[104, 5, 1, "", "fwave"], [104, 5, 1, "", "kernel_language"], [104, 5, 1, "", "mthlim"], [104, 5, 1, "", "order"], [104, 2, 1, "", "setup"], [104, 5, 1, "", "source_split"], [104, 2, 1, "", "step"], [104, 2, 1, "", "step_hyperbolic"], [104, 5, 1, "", "step_source"], [104, 5, 1, "", "verbosity"]], "clawpack.pyclaw.controller": [[91, 0, 1, "", "Controller"]], "clawpack.pyclaw.controller.Controller": [[91, 5, 1, "", "F_file_name"], [91, 4, 1, "", "F_path"], [91, 2, 1, "", "check_validity"], [91, 5, 1, "", "compute_F"], [91, 5, 1, "", "compute_p"], [91, 5, 1, "", "file_prefix_p"], [91, 5, 1, "", "frames"], [91, 5, 1, "", "keep_copy"], [91, 5, 1, "", "nstepout"], [91, 5, 1, "", "num_output_times"], [91, 5, 1, "", "out_times"], [91, 5, 1, "", "outdir"], [91, 4, 1, "", "outdir_p"], [91, 5, 1, "", "output_file_prefix"], [91, 5, 1, "", "output_format"], [91, 5, 1, "", "output_options"], [91, 5, 1, "", "output_style"], [91, 5, 1, "", "overwrite"], [91, 2, 1, "", "plot"], [91, 5, 1, "", "plotdata"], [91, 2, 1, "", "run"], [91, 5, 1, "", "rundir"], [91, 5, 1, "", "runmake"], [91, 5, 1, "", "savecode"], [91, 5, 1, "", "solver"], [91, 5, 1, "", "tfinal"], [91, 4, 1, "", "verbosity"], [91, 5, 1, "", "viewable_attributes"], [91, 5, 1, "", "write_aux_always"], [91, 5, 1, "", "write_aux_init"], [91, 5, 1, "", "xclawcmd"], [91, 5, 1, "", "xclawerr"], [91, 5, 1, "", "xclawout"], [91, 5, 1, "", "xdir"]], "clawpack.pyclaw.fileio": [[97, 1, 0, "-", "ascii"], [97, 1, 0, "-", "binary"], [97, 1, 0, "-", "hdf5"], [97, 1, 0, "-", "netcdf"]], "clawpack.pyclaw.fileio.ascii": [[97, 3, 1, "", "read"], [97, 3, 1, "", "read_array"], [97, 3, 1, "", "read_patch_header"], [97, 3, 1, "", "read_t"], [97, 3, 1, "", "write"], [97, 3, 1, "", "write_array"]], "clawpack.pyclaw.fileio.binary": [[97, 3, 1, "", "read"]], "clawpack.pyclaw.fileio.hdf5": [[97, 3, 1, "", "read"], [97, 3, 1, "", "write"]], "clawpack.pyclaw.fileio.netcdf": [[97, 3, 1, "", "read"], [97, 3, 1, "", "write"]], "clawpack.pyclaw.geometry": [[94, 0, 1, "", "Dimension"], [94, 0, 1, "", "Domain"], [94, 0, 1, "", "Grid"], [94, 0, 1, "", "Patch"]], "clawpack.pyclaw.geometry.Dimension": [[94, 4, 1, "", "centers"], [94, 2, 1, "", "centers_with_ghost"], [94, 4, 1, "", "delta"], [94, 4, 1, "", "nodes"], [94, 2, 1, "", "nodes_with_ghost"]], "clawpack.pyclaw.geometry.Domain": [[94, 4, 1, "", "grid"], [94, 4, 1, "", "num_dim"], [94, 4, 1, "", "patch"]], "clawpack.pyclaw.geometry.Grid": [[94, 2, 1, "", "add_dimension"], [94, 2, 1, "", "add_gauges"], [94, 2, 1, "", "c_center"], [94, 4, 1, "", "c_centers"], [94, 2, 1, "", "c_centers_with_ghost"], [94, 4, 1, "", "c_nodes"], [94, 2, 1, "", "c_nodes_with_ghost"], [94, 4, 1, "", "dimensions"], [94, 5, 1, "", "gauge_dir_name"], [94, 5, 1, "", "gauge_file_names"], [94, 5, 1, "", "gauge_files"], [94, 5, 1, "", "gauges"], [94, 2, 1, "", "get_dim_attribute"], [94, 4, 1, "", "num_dim"], [94, 2, 1, "", "p_center"], [94, 4, 1, "", "p_centers"], [94, 4, 1, "", "p_nodes"], [94, 2, 1, "", "plot"], [94, 2, 1, "", "setup_gauge_files"]], "clawpack.pyclaw.geometry.Patch": [[94, 2, 1, "", "add_dimension"], [94, 4, 1, "", "delta"], [94, 4, 1, "", "dimensions"], [94, 2, 1, "", "get_dim_attribute"], [94, 5, 1, "", "level"], [94, 4, 1, "", "lower_global"], [94, 4, 1, "", "name"], [94, 4, 1, "", "num_cells_global"], [94, 4, 1, "", "num_dim"], [94, 5, 1, "", "patch_index"], [94, 4, 1, "", "upper_global"]], "clawpack.pyclaw.limiters": [[92, 1, 0, "-", "tvd"]], "clawpack.pyclaw.limiters.tvd": [[92, 3, 1, "", "arora_roe"], [92, 3, 1, "", "beta_limiter"], [92, 3, 1, "", "cada_torrilhon_limiter"], [92, 3, 1, "", "cada_torrilhon_limiter_nonlinear"], [92, 3, 1, "", "cfl_superbee"], [92, 3, 1, "", "cfl_superbee_theta"], [92, 3, 1, "", "hyperbee_limiter"], [92, 3, 1, "", "limit"], [92, 3, 1, "", "mc_limiter"], [92, 3, 1, "", "minmod_limiter"], [92, 3, 1, "", "superbee_limiter"], [92, 3, 1, "", "superpower_limiter"], [92, 3, 1, "", "theta_limiter"], [92, 3, 1, "", "upper_bound_limiter"], [92, 3, 1, "", "van_leer_klein_sharpening_limiter"]], "clawpack.pyclaw.sharpclaw.solver": [[104, 0, 1, "", "SharpClawSolver"]], "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver": [[104, 2, 1, "", "accept_reject_step"], [104, 5, 1, "", "aux_time_dep"], [104, 5, 1, "", "call_before_step_each_stage"], [104, 5, 1, "", "cfl_desired"], [104, 5, 1, "", "cfl_max"], [104, 5, 1, "", "char_decomp"], [104, 2, 1, "", "check_3rd_ord_cond"], [104, 2, 1, "", "dq"], [104, 5, 1, "", "dq_src"], [104, 2, 1, "", "dqdt"], [104, 5, 1, "", "fwave"], [104, 2, 1, "", "get_dt_new"], [104, 5, 1, "", "kernel_language"], [104, 5, 1, "", "lim_type"], [104, 5, 1, "", "num_ghost"], [104, 2, 1, "", "setup"], [104, 2, 1, "", "step"], [104, 5, 1, "", "tfluct"], [104, 5, 1, "", "tfluct_solver"], [104, 5, 1, "", "time_integrator"], [104, 2, 1, "", "update_saved_values"], [104, 5, 1, "", "weno_order"]], "clawpack.pyclaw.solution": [[103, 0, 1, "", "Solution"]], "clawpack.pyclaw.solution.Solution": [[103, 2, 1, "", "is_valid"], [103, 4, 1, "", "patch"], [103, 2, 1, "", "plot"], [103, 2, 1, "", "read"], [103, 2, 1, "", "set_all_states"], [103, 4, 1, "", "start_frame"], [103, 4, 1, "", "state"], [103, 2, 1, "", "write"]], "clawpack.pyclaw.state": [[106, 0, 1, "", "State"]], "clawpack.pyclaw.state.State": [[106, 5, 1, "", "F"], [106, 5, 1, "", "gauge_data"], [106, 2, 1, "", "get_aux_global"], [106, 2, 1, "", "get_auxbc_from_aux"], [106, 2, 1, "", "get_q_global"], [106, 2, 1, "", "get_qbc_from_q"], [106, 2, 1, "", "is_valid"], [106, 5, 1, "", "keep_gauges"], [106, 4, 1, "", "mF"], [106, 4, 1, "", "mp"], [106, 4, 1, "", "num_aux"], [106, 4, 1, "", "num_eqn"], [106, 5, 1, "", "p"], [106, 5, 1, "", "problem_data"], [106, 2, 1, "", "set_aux_from_auxbc"], [106, 2, 1, "", "set_cparam"], [106, 2, 1, "", "set_num_ghost"], [106, 2, 1, "", "set_q_from_qbc"], [106, 5, 1, "", "t"]], "clawpack.pyclaw": [[109, 1, 0, "-", "util"]], "clawpack.pyclaw.util": [[109, 0, 1, "", "FrameCounter"], [109, 6, 1, "", "VerifyError"], [109, 3, 1, "", "add_parent_doc"], [109, 3, 1, "", "check_diff"], [109, 3, 1, "", "compile_library"], [109, 3, 1, "", "construct_function_handle"], [109, 3, 1, "", "convert_fort_double_to_float"], [109, 3, 1, "", "gen_variants"], [109, 3, 1, "", "read_data_line"], [109, 3, 1, "", "run_app_from_main"], [109, 3, 1, "", "run_serialized"], [109, 3, 1, "", "test_app"]], "clawpack.pyclaw.util.FrameCounter": [[109, 2, 1, "", "get_counter"], [109, 2, 1, "", "increment"], [109, 2, 1, "", "reset_counter"], [109, 2, 1, "", "set_counter"]], "clawpack.riemann": [[102, 1, 0, "-", "acoustics_1D_py"], [102, 1, 0, "-", "advection_1D_py"], [102, 1, 0, "-", "burgers_1D_py"], [102, 1, 0, "-", "euler_1D_py"], [102, 1, 0, "-", "shallow_1D_py"]], "clawpack.riemann.acoustics_1D_py": [[102, 3, 1, "", "acoustics_1D"]], "clawpack.riemann.advection_1D_py": [[102, 3, 1, "", "advection_1D"]], "clawpack.riemann.burgers_1D_py": [[102, 3, 1, "", "burgers_1D"]], "clawpack.riemann.euler_1D_py": [[102, 3, 1, "", "euler_exact_1D"], [102, 3, 1, "", "euler_hll_1D"], [102, 3, 1, "", "euler_hllc_1D"], [102, 3, 1, "", "euler_roe_1D"]], "clawpack.riemann.shallow_1D_py": [[102, 3, 1, "", "shallow_exact_1D"], [102, 3, 1, "", "shallow_fwave_1d"], [102, 3, 1, "", "shallow_hll_1D"], [102, 3, 1, "", "shallow_roe_1D"]]}, "objtypes": {"0": "py:class", "1": "py:module", "2": "py:method", "3": "py:function", "4": "py:property", "5": "py:attribute", "6": "py:exception"}, "objnames": {"0": ["py", "class", "Python class"], "1": ["py", "module", "Python module"], "2": ["py", "method", "Python method"], "3": ["py", "function", "Python function"], "4": ["py", "property", "Python property"], "5": ["py", "attribute", "Python attribute"], "6": ["py", "exception", "Python exception"]}, "titleterms": {"clawplotax": 0, "attribut": [0, 1, 2, 3, 29, 34, 55, 82, 142], "gaug": [0, 47, 55, 64, 98, 166], "plot": [0, 3, 13, 24, 27, 34, 36, 47, 50, 53, 55, 64, 66, 71, 80, 81, 82, 83, 84, 93, 99, 100, 116, 147, 153, 165, 168], "method": [0, 1, 2, 3, 142, 170], "clawplotdata": 1, "clawplotfigur": 2, "clawplotitem": [3, 82], "special": [3, 149], "all": [3, 62, 70], "1d": [3, 8, 18], "plot_typ": 3, "1d_plot": 3, "1d_fill_between": 3, "1d_from_2d_data": 3, "2d": [3, 19, 140], "2d_contour": 3, "2d_pcolor": 3, "2d_imshow": 3, "2d_hillshad": 3, "amr": [3, 5, 6, 24, 70, 76, 115, 142, 149, 151], "colorbar": [3, 55], "about": [4, 86], "thi": [4, 58], "softwar": [4, 17], "licens": [4, 65, 86], "author": 4, "cite": [4, 96], "work": [4, 35, 37, 93, 163, 164, 167], "fund": [4, 86], "guid": [5, 30, 58, 59, 113, 114], "adjoint": 5, "flag": [5, 6, 66, 70, 115, 142, 149], "us": [5, 13, 18, 19, 27, 31, 36, 41, 52, 56, 62, 64, 67, 71, 73, 76, 78, 98, 101, 104, 107, 140, 141, 144, 147, 165, 167], "geoclaw": [5, 15, 16, 20, 24, 27, 42, 48, 49, 50, 51, 52, 53, 55, 76, 79, 83, 112, 115, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 142, 145, 151, 156, 157], "adapt": [6, 16, 27, 41], "mesh": [6, 27], "refin": [6, 16, 27, 41, 115, 151], "algorithm": [6, 17, 70, 78, 170], "ghost": 6, "cell": [6, 42, 142, 151], "boundari": [6, 16, 101, 167, 170], "condit": [6, 16, 101, 108, 167, 170], "choos": [6, 70], "initi": [6, 42, 70, 101, 108, 144, 151, 167], "finer": 6, "grid": [6, 16, 34, 35, 36, 37, 49, 57, 64, 76, 94, 151], "For": 6, "more": [6, 39, 43], "detail": [6, 7, 48], "amrclaw": [7, 8, 9, 10, 20, 27, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 149, 150, 167], "descript": [7, 48], "content": [7, 27, 30, 42, 48, 70, 82, 88, 98, 104, 116, 142], "problem": [8, 89, 101, 108, 167], "old": 8, "approach": 8, "deprec": [8, 151], "doxygen": 9, "document": [9, 11, 32, 35, 37, 51, 58, 59, 63, 96, 126, 127, 155, 164], "flowchart": 10, "applic": [11, 12, 17, 27, 28, 66, 74, 99], "convert": [11, 21, 22], "readm": 11, "rst": 11, "html": [11, 84], "code": [11, 18, 19, 27, 30, 42, 50, 61, 62, 79, 116, 165, 167], "clawcode2html": 11, "clawpack": [12, 13, 17, 20, 21, 22, 23, 24, 25, 26, 27, 31, 46, 56, 58, 59, 60, 61, 66, 78, 79, 89, 92, 104, 105, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 141, 152, 169], "repositori": [12, 20, 25, 30, 54, 58, 59, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 140], "jupyt": [12, 31, 40, 153], "notebook": [12, 31, 40, 110, 153], "submodul": 12, "exampl": [12, 19, 27, 28, 34, 36, 38, 39, 40, 42, 45, 47, 50, 55, 62, 70, 71, 74, 80, 93, 96, 99, 142], "includ": [12, 58], "amazon": 13, "web": 13, "servic": 13, "ec2": 13, "ami": 13, "find": [13, 70, 82], "launch": 13, "an": [13, 38, 39, 40, 55, 64, 70, 74, 99], "instanc": 13, "log": [13, 98], "your": [13, 30, 31, 39, 55, 99, 101, 105, 153, 160], "view": 13, "result": [13, 50, 55, 100, 153], "webpag": [13, 58, 153], "directli": [13, 36], "from": [13, 21, 22, 24, 27, 30, 32, 35, 37, 40, 42, 45, 51, 58, 63, 70, 84, 89, 93, 100, 142, 164], "transfer": 13, "file": [13, 31, 33, 34, 36, 42, 55, 57, 58, 59, 61, 67, 71, 82, 84, 116, 139, 142, 151, 162, 167], "stop": [13, 31], "creat": [13, 31, 42, 55, 59, 70, 71, 74, 88], "own": [13, 31, 101], "b4run": 14, "function": [14, 51, 63, 69, 70, 84, 98, 104, 170], "b4step": [15, 167], "default": [15, 112, 144, 145, 156, 157], "routin": [15, 24, 67, 83, 112, 145, 156, 157], "clamshel": 16, "sphere": [16, 154], "user": [16, 26, 78, 167], "defin": [16, 142], "bibliographi": 17, "paper": 17, "describ": 17, "other": [17, 20, 25, 26, 31, 34, 58, 82, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 142, 144], "refer": [17, 27, 56, 96, 110], "boussinesq": [18, 19], "solver": [18, 19, 78, 88, 96, 101, 102, 104, 108, 140, 141, 167], "One": [18, 49, 140, 141, 170], "space": [18, 19, 49, 170], "dimens": [18, 19, 49, 94, 141, 170], "makefil": [18, 19, 43, 66, 67, 101, 139], "setrun": [18, 19, 24, 47, 148, 149, 150, 151, 152], "py": [18, 19, 24, 36, 82, 111, 147, 148, 149, 150, 151, 152], "two": [19, 141], "type": 19, "dispers": 19, "equat": [19, 102, 108, 141], "The": [19, 55, 69, 70, 71, 108], "sgn": 19, "madsen": 19, "sorensen": 19, "m": 19, "prerequisit": [19, 85], "wave": [19, 140, 170], "break": 19, "switch": [19, 71], "swe": 19, "chang": [20, 24, 82, 104, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "master": [20, 30], "sinc": 20, "v5": [20, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "10": [20, 118], "0": [20, 22, 24, 31, 117, 118, 119, 120, 123, 125, 127, 128, 130, 132, 135], "ar": [20, 82, 118, 127, 128, 129, 130, 131, 132, 133, 134, 135], "backward": [20, 118, 127, 128, 129, 130, 131, 132, 133, 134, 135], "compat": [20, 118, 127, 128, 129, 130, 131, 132, 133, 134, 135], "gener": [20, 24, 32, 35, 37, 51, 58, 63, 127, 128, 129, 130, 131, 132, 133, 134, 135, 137, 151, 164], "classic": [20, 27, 38, 39, 104, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 148, 152, 160], "clawutil": [20, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "visclaw": [20, 27, 64, 81, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "riemann": [20, 27, 96, 101, 102, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 140, 141, 167], "pyclaw": [20, 24, 27, 38, 40, 62, 86, 87, 88, 89, 90, 91, 92, 93, 94, 96, 97, 98, 100, 103, 104, 105, 106, 108, 109, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 160], "4": [21, 22, 23, 24, 89, 125, 126, 138], "3": [21, 42, 70, 123, 124], "6": [21, 22, 89, 128, 129], "5": [22, 24, 31, 127], "python": [22, 84, 85, 105, 110, 111, 130, 163], "convers": 22, "tool": [22, 27, 47, 53, 64, 116, 158, 163], "x": [23, 24, 89, 138], "link": 23, "fortran": [24, 27, 33, 39, 42, 43, 44, 61, 85, 107, 116, 165, 167], "packag": [24, 62, 97, 102], "input": [24, 34, 36, 97, 148, 149], "paramet": [24, 47, 82, 84, 108, 148, 149, 151], "compon": [25, 82], "commun": [26, 30, 79], "workshop": [26, 79], "clinic": 26, "tutori": [26, 108, 110], "avail": [26, 45], "stream": 26, "upcom": 26, "recent": [26, 30], "develop": [26, 27, 30, 79], "sprint": [26, 79], "session": 26, "previou": [26, 58], "event": [26, 55], "full": 27, "tabl": [27, 96], "overview": [27, 147], "get": [27, 31, 50, 71], "start": [27, 31, 50, 113, 114], "geophys": 27, "flow": [27, 88], "visual": [27, 55], "migrat": 27, "older": 27, "version": [27, 31, 43, 54, 56, 58, 59, 62, 111], "resourc": 27, "contribut": [28, 30, 141], "current_data": [29, 84], "guidelin": 30, "report": 30, "fix": [30, 34, 36, 76, 151], "bug": 30, "instal": [30, 39, 40, 60, 61, 62, 78, 85, 96, 99, 105, 107, 111, 160, 165], "instruct": [30, 62], "clone": [30, 61], "most": 30, "github": [30, 59], "check": [30, 116], "out": [30, 70], "branch": [30, 58], "each": [30, 167], "updat": [30, 58, 59], "latest": 30, "never": 30, "commit": 30, "ad": [30, 55, 93, 101, 140], "fork": 30, "remot": 30, "modifi": [30, 67, 139], "issu": 30, "pull": 30, "request": 30, "test": [30, 39, 40, 99, 105, 116, 160], "top": 30, "level": [30, 144, 151], "git": [30, 54, 58, 61, 85], "workflow": 30, "catch": 30, "error": [30, 107], "pyflak": 30, "pylint": 30, "coverag": 30, "troubl": [30, 71, 165], "shoot": [30, 71], "tip": [30, 43, 53, 55, 99], "docker": 31, "9": [31, 135, 136, 137], "abov": 31, "contain": 31, "restart": [31, 88, 139], "run": [31, 38, 39, 40, 50, 88, 90, 93, 99, 100, 116, 148, 149, 165], "move": [31, 32, 49], "between": [31, 82], "host": 31, "machin": [31, 169], "some": [31, 82, 151, 166], "command": [31, 40, 71, 84, 93, 165], "imag": [31, 55], "dockerfil": [31, 59], "binder": 31, "dtopotool": 32, "modul": [32, 35, 37, 51, 63, 96, 109, 150, 152, 164], "topographi": [32, 42, 50, 55, 70, 151, 162, 164, 166], "auto": [32, 35, 37, 51, 63, 164], "docstr": [32, 35, 37, 51, 63, 164], "77": 33, "v": 33, "90": 33, "monitor": [34, 151], "fgmax": [34, 35, 70], "specif": [34, 36, 108, 116, 151, 158, 167], "differ": [34, 55, 62, 67, 78, 82], "point": [34, 70], "style": [34, 58, 77], "valu": [34, 88], "choic": [34, 36], "interpol": [34, 36, 72], "procedur": [34, 36], "A": [34, 36, 142], "simpl": [34, 36, 142], "process": [34, 81], "output": [34, 36, 66, 70, 71, 73, 76, 77, 88, 97, 98, 116, 139, 148, 149, 151, 165], "format": [34, 36, 77, 162], "fgmax_tool": 35, "fgout": [36, 37, 64], "setplot": [36, 71, 82, 84, 147], "produc": [36, 84], "read": [36, 42, 142], "arrai": [36, 42, 70, 77, 107], "registr": [36, 57], "fgout_tool": 37, "ipython": [40, 93], "interpret": 40, "line": [40, 84, 93, 116, 165], "specifi": [41, 64, 82, 84, 115, 147, 148, 149, 151, 167], "flagregion": 41, "rule": [41, 142], "rectangl": [41, 142], "forc": [42, 151], "dry": [42, 70, 151], "sampl": [42, 70, 150, 152], "1": [42, 70, 119, 121, 124, 126, 129, 131, 133, 136], "arcsecond": [42, 70], "dem": [42, 70], "force_dry_init": 42, "usag": 42, "intern": 42, "modif": 42, "compil": [44, 66, 107, 155, 165], "fc": [44, 146], "environ": [44, 146], "variabl": [44, 66, 101, 146], "fflag": 44, "lflag": 44, "pre": 44, "processor": 44, "ppflag": 44, "gfortran": [44, 105], "intel": 44, "book": 45, "fvmhp": 45, "youtub": 45, "video": 45, "galleri": [46, 58, 71], "locat": 47, "coordin": [49, 53, 55], "system": [49, 85], "uniform": 49, "map": [49, 55], "topograpi": 49, "data": [49, 55, 77, 147, 151, 159, 162, 164, 165, 166, 167], "dtopo": [49, 163], "set": [50, 71, 82, 84, 101, 143, 144, 146, 165], "up": [50, 101], "new": [50, 58, 74, 93, 116], "util": [51, 63, 109], "cautionari": 52, "hint": [52, 82, 110], "tsunami": [52, 55, 114, 166], "hazard": 52, "model": [52, 75, 113, 114, 166], "water": [53, 102, 141, 154], "depth": 53, "surfac": [53, 144], "elev": [53, 70, 144], "latitud": [53, 55], "longitud": [53, 55], "ax": 53, "keep": 54, "track": [54, 64], "googl": 55, "earth": 55, "basic": [55, 87, 100], "requir": [55, 167], "option": [55, 61, 84, 99, 101], "gdal": 55, "librari": [55, 67], "chile": 55, "2010": [55, 79], "need": 55, "plotdata": 55, "plotfigur": 55, "figur": [55, 82], "plotax": 55, "plotitem": 55, "overlai": 55, "addit": [55, 149, 151], "kml": 55, "kmz": 55, "tile": 55, "faster": 55, "load": 55, "remov": 55, "alias": 55, "artifact": 55, "multipl": 55, "resolut": [55, 170], "publish": 55, "gpu": 56, "netcdf": [57, 73, 77, 97, 162], "tag": 58, "configur": 58, "doc": 58, "releas": [58, 59, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138], "To": 58, "major": 58, "extra": 58, "built": [58, 93], "sphinx": [58, 155], "page": 58, "do": 59, "prepar": 59, "number": 59, "candid": 59, "tar": [59, 61], "final": 59, "pypi": 59, "zenodo": 59, "open": 59, "scienc": 59, "framework": 59, "osf": 59, "app": 59, "next": [60, 61, 62, 105], "step": [60, 61, 62, 105, 167], "pip": [62, 85, 165], "quick": [62, 113, 114], "experi": 62, "directori": [62, 66, 74, 82], "troubleshoot": [62, 107, 165], "kmltool": 63, "lagrangian": 64, "particl": 64, "altern": 64, "duplic": 66, "base": 66, "sourc": [66, 75, 101, 154, 159, 166, 167, 170], "name": [66, 67], "replac": 67, "same": 67, "man": 68, "friction": 68, "term": [68, 101, 154, 167, 170], "mapc2p": 69, "march": 70, "front": 70, "argument": 70, "mask": 70, "topofil": 70, "region": [70, 115, 142, 151], "previous_pts_chosen": 70, "below": 70, "given": 70, "buffer": 70, "zone": 70, "along": 70, "shore": 70, "onli": 70, "write": [70, 101, 116, 142], "indic": [70, 96], "determin": 70, "area": 70, "mhw": 70, "matlab": 71, "search": 71, "path": [71, 111], "plotclaw": 71, "afterfram": 71, "help": 71, "found": 71, "maxfram": 71, "nearshor": 72, "copi": 74, "exist": 74, "earthquak": [75, 166], "fault": 75, "slip": 75, "okada": 75, "rectangular": 75, "subfault": 75, "kinemat": 75, "ruptur": 75, "triangular": 75, "openmp": 76, "sytl": 77, "ascii": [77, 97], "fort": [77, 82], "t0002": 77, "q0002": 77, "raw": 77, "binari": [77, 97], "aux": [77, 88], "which": [78, 111], "should": 78, "i": [78, 98], "interfac": 78, "parallel": [78, 94, 99, 100, 106], "comput": [78, 139], "photo": 79, "2016": 79, "univers": 79, "washington": 79, "2015": 79, "utah": 79, "2014": 79, "hpc3": 79, "kaust": 79, "2013": 79, "claw": [79, 146], "dev": 79, "uw": 79, "2012": 79, "2011": 79, "hack": 79, "post": 81, "fly": 81, "faq": 82, "what": [82, 84, 98, 141], "": [82, 93, 104, 141, 170], "make": [82, 99, 153, 165], "how": [82, 84, 98], "someth": 82, "than": 82, "q": 82, "add": 82, "anoth": 82, "curv": 82, "e": 82, "g": 82, "true": 82, "solut": [82, 88, 103], "titl": 82, "outdir": 82, "item": 82, "provid": 82, "size": 82, "background": 82, "color": 82, "colormap": 82, "pcolor": 82, "contourf": 82, "debug": [82, 149], "latex": 84, "interact": [84, 93], "iplotclaw": 84, "access": 84, "printfram": 84, "oper": 85, "contributor": 86, "understand": 88, "class": [88, 91, 158], "simul": 88, "creation": 88, "control": [88, 91, 108], "deriv": [88, 98], "quantiti": [88, 98], "port": 89, "cloud": 90, "sage": 90, "math": 90, "limit": 92, "tvd": 92, "cfl": 92, "independ": 92, "depend": [92, 105], "geometri": 94, "serial": [94, 106, 116], "object": [94, 147], "domain": [94, 108], "patch": 94, "petclaw": [94, 106], "go": 95, "further": 95, "featur": 96, "fileio": 97, "hdf5": 97, "frame": 98, "when": 98, "save": [98, 153], "written": 98, "where": 98, "petsc": 99, "correctli": 99, "pass": 99, "script": 101, "auxiliari": 101, "acoust": [102, 108], "advect": 102, "burger": 102, "euler": 102, "shallow": [102, 141, 154], "sharpclaw": 104, "custom": [104, 140], "bc": 104, "signatur": 104, "numpi": 105, "matplotlib": 105, "obtain": 105, "nose": 105, "state": 106, "order": 107, "solv": 108, "drop": 110, "support": [110, 130], "2": [110, 120, 121, 122, 134, 137], "7": [110, 130, 131], "whichclaw": 111, "wa": 111, "import": 111, "sy": 111, "easi": 111, "pth": 111, "pythonpath": [111, 146], "qinit": [112, 151, 162], "storm": [113, 151, 158, 159], "surg": [113, 159], "criteria": 115, "flag2refin": 115, "richardson": 115, "extrapol": 115, "implement": 115, "regress": 116, "travi": 116, "continu": 116, "integr": 116, "diff": 116, "chardiff": 116, "comparison": 116, "imagediff": 116, "pixel": 116, "simultan": 116, "doctest": 116, "note": [117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138], "global": 125, "8": [132, 133, 134], "checkpoint": 139, "after": 139, "dimension": 140, "pointwis": 140, "f": [140, 170], "layer": 141, "potenti": 141, "miss": 141, "demonstr": 141, "roe": 141, "hll": 141, "relat": 142, "convex": 142, "polygon": 142, "d": 142, "slu": 142, "bounding_box": 142, "mask_outsid": 142, "instanti": 142, "make_kml": 142, "cover": 142, "select": 142, "continent": 142, "shelf": 142, "sea_level": 143, "eta": 144, "init": 144, "spatial": [144, 167], "vari": [144, 167], "behavior": 144, "adjust": [144, 151], "sea": [144, 151], "seismic": 144, "deform": 144, "case": 144, "setaux": [145, 167], "desir": 147, "time": [148, 149, 151, 161, 167], "print": 149, "geo": 151, "fixedgrid": 151, "maximum": 151, "arriv": 151, "share": 153, "local": 155, "src1d": [156, 167], "src": [157, 167], "statist": 161, "download": 162, "displac": 162, "topo": 163, "topotool": 164, "f2py": 165, "ex": 165, "bathymetri": 166, "dart": 166, "buoi": 166, "tide": 166, "done": 167, "befor": 167, "visit": 168, "virtual": 169, "propag": 170, "godunov": 170, "high": 170, "formul": 170, "capac": 170}, "envversion": {"sphinx.domains.c": 2, "sphinx.domains.changeset": 1, "sphinx.domains.citation": 1, "sphinx.domains.cpp": 8, "sphinx.domains.index": 1, "sphinx.domains.javascript": 2, "sphinx.domains.math": 2, "sphinx.domains.python": 3, "sphinx.domains.rst": 2, "sphinx.domains.std": 2, "sphinx": 57}, "alltitles": {"ClawPlotAxes": [[0, "clawplotaxes"]], "Attributes": [[0, "attributes"], [1, "attributes"], [2, "attributes"], [3, "attributes"]], "Attributes for gauge plots": [[0, "attributes-for-gauge-plots"]], "Methods": [[0, "methods"], [1, "methods"], [2, "methods"], [3, "methods"]], "ClawPlotData": [[1, "clawplotdata"]], "ClawPlotFigure": [[2, "clawplotfigure"]], "ClawPlotItem": [[3, "clawplotitem"]], "Special attributes for all 1d plots,  plot_type = \u20181d\u2026\u2019": [[3, "special-attributes-for-all-1d-plots-plot-type-1d"]], "Special attributes for plot_type = \u20181d_plot\u2019": [[3, "special-attributes-for-plot-type-1d-plot"]], "Special attributes for plot_type = \u20181d_fill_between\u2019": [[3, "special-attributes-for-plot-type-1d-fill-between"]], "Special attributes for plot_type = \u20181d_from_2d_data\u2019": [[3, "special-attributes-for-plot-type-1d-from-2d-data"]], "Special attributes for all 2d plots,  plot_type = \u20182d\u2026\u2019": [[3, "special-attributes-for-all-2d-plots-plot-type-2d"]], "Special attributes for plot_type = \u20182d_contour\u2019": [[3, "special-attributes-for-plot-type-2d-contour"]], "Special attributes for plot_type = \u20182d_pcolor\u2019": [[3, "special-attributes-for-plot-type-2d-pcolor"]], "Special attributes for plot_type = \u20182d_imshow\u2019": [[3, "special-attributes-for-plot-type-2d-imshow"]], "Special attributes for plot_type = \u20182d_hillshade\u2019": [[3, "special-attributes-for-plot-type-2d-hillshade"]], "AMR Attributes": [[3, "amr-attributes"]], "Colorbar attributes": [[3, "colorbar-attributes"]], "About this software": [[4, "about-this-software"]], "License": [[4, "license"], [65, "license"], [86, "license"]], "Authors": [[4, "authors"]], "Citing this work": [[4, "citing-this-work"]], "Funding": [[4, "funding"], [86, "funding"]], "Guiding AMR with adjoint flagging": [[5, "guiding-amr-with-adjoint-flagging"]], "Using adjoint flagging in GeoClaw": [[5, "using-adjoint-flagging-in-geoclaw"]], "Adaptive mesh refinement (AMR) algorithms": [[6, "adaptive-mesh-refinement-amr-algorithms"]], "Ghost cells and boundary conditions for AMR": [[6, "ghost-cells-and-boundary-conditions-for-amr"]], "Choosing and initializing finer grids": [[6, "choosing-and-initializing-finer-grids"]], "Flagging cells for refinement": [[6, "flagging-cells-for-refinement"]], "For more details": [[6, "for-more-details"]], "AMRClaw Description and Detailed Contents": [[7, "amrclaw-description-and-detailed-contents"]], "AMRClaw for 1d problems": [[8, "amrclaw-for-1d-problems"]], "Old approach, deprecated:": [[8, "old-approach-deprecated"]], "Doxygen documentation of AMRClaw": [[9, "doxygen-documentation-of-amrclaw"]], "AMRClaw Flowcharts": [[10, "amrclaw-flowcharts"]], "Application documentation": [[11, "application-documentation"]], "Converting README.rst to README.html": [[11, "converting-readme-rst-to-readme-html"]], "Converting code to html with clawcode2html": [[11, "converting-code-to-html-with-clawcode2html"]], "Clawpack Applications repository": [[12, "clawpack-applications-repository"]], "Jupyter Notebooks": [[12, "jupyter-notebooks"]], "Submodules": [[12, "submodules"]], "Examples included with Clawpack": [[12, "examples-included-with-clawpack"]], "Amazon Web Services EC2 Clawpack AMI": [[13, "amazon-web-services-ec2-clawpack-ami"]], "Finding the Clawpack AMI": [[13, "finding-the-clawpack-ami"]], "Launching an instance": [[13, "launching-an-instance"]], "Logging on to your instance": [[13, "logging-on-to-your-instance"]], "Using Clawpack": [[13, "using-clawpack"]], "Viewing plots of results": [[13, "viewing-plots-of-results"]], "Viewing webpages directly from your instance": [[13, "viewing-webpages-directly-from-your-instance"]], "Transferring files to/from your instance": [[13, "transferring-files-to-from-your-instance"]], "Stopping your instance": [[13, "stopping-your-instance"]], "Creating your own AMI": [[13, "creating-your-own-ami"]], "b4run function": [[14, "b4run-function"]], "b4step default routines": [[15, "b4step-default-routines"]], "b4step routine in GeoClaw": [[15, "b4step-routine-in-geoclaw"]], "Boundary conditions": [[16, "boundary-conditions"], [170, "boundary-conditions"]], "Boundary conditions for adaptive refinement": [[16, "boundary-conditions-for-adaptive-refinement"]], "Boundary conditions for GeoClaw": [[16, "boundary-conditions-for-geoclaw"]], "Boundary conditions for clamshell grids on the sphere": [[16, "boundary-conditions-for-clamshell-grids-on-the-sphere"]], "User-defined boundary conditions": [[16, "user-defined-boundary-conditions"]], "Bibliography": [[17, "bibliography"]], "Papers describing the Clawpack software and algorithms": [[17, "papers-describing-the-clawpack-software-and-algorithms"]], "Papers describing applications": [[17, "papers-describing-applications"]], "Other references": [[17, "other-references"]], "Boussinesq solvers in One Space Dimension": [[18, "boussinesq-solvers-in-one-space-dimension"]], "Using the 1d Boussinesq code": [[18, "using-the-1d-boussinesq-code"]], "Makefile": [[18, "makefile"], [19, "makefile"]], "setrun.py": [[18, "setrun-py"], [19, "setrun-py"]], "Boussinesq solvers in Two Space Dimensions": [[19, "boussinesq-solvers-in-two-space-dimensions"]], "Boussinesq-type dispersive equations": [[19, "boussinesq-type-dispersive-equations"]], "The SGN equations": [[19, "the-sgn-equations"]], "The Madsen-Sorensen (MS) equations": [[19, "the-madsen-sorensen-ms-equations"]], "Using the 2d Boussinesq code": [[19, "using-the-2d-boussinesq-code"]], "Prerequisites for the 2d Boussinesq code": [[19, "prerequisites-for-the-2d-boussinesq-code"]], "Wave breaking and switching to SWE": [[19, "wave-breaking-and-switching-to-swe"]], "Examples": [[19, "examples"], [42, "examples"], [47, "examples"], [70, "examples"], [96, "examples"], [142, "examples"]], "Changes to master since v5.10.0": [[20, "changes-to-master-since-v5-10-0"]], "Changes that are not backward compatible": [[20, "changes-that-are-not-backward-compatible"], [118, "changes-that-are-not-backward-compatible"], [127, "changes-that-are-not-backward-compatible"], [128, "changes-that-are-not-backward-compatible"], [129, "changes-that-are-not-backward-compatible"], [130, "changes-that-are-not-backward-compatible"], [131, "changes-that-are-not-backward-compatible"], [132, "changes-that-are-not-backward-compatible"], [133, "changes-that-are-not-backward-compatible"], [134, "changes-that-are-not-backward-compatible"], [135, "changes-that-are-not-backward-compatible"]], "General changes": [[20, "general-changes"], [127, "general-changes"], [128, "general-changes"], [129, "general-changes"], [130, "general-changes"], [131, "general-changes"], [132, "general-changes"], [133, "general-changes"], [134, "general-changes"], [135, "general-changes"], [137, "general-changes"]], "Changes to classic": [[20, "changes-to-classic"], [118, "changes-to-classic"], [119, "changes-to-classic"], [120, "changes-to-classic"], [121, "changes-to-classic"], [122, "changes-to-classic"], [123, "changes-to-classic"], [124, "changes-to-classic"], [125, "changes-to-classic"], [126, "changes-to-classic"], [127, "changes-to-classic"], [128, "changes-to-classic"], [129, "changes-to-classic"], [130, "changes-to-classic"], [131, "changes-to-classic"], [132, "changes-to-classic"], [133, "changes-to-classic"], [134, "changes-to-classic"], [135, "changes-to-classic"], [136, "changes-to-classic"], [137, "changes-to-classic"]], "Changes to clawutil": [[20, "changes-to-clawutil"], [118, "changes-to-clawutil"], [119, "changes-to-clawutil"], [120, "changes-to-clawutil"], [121, "changes-to-clawutil"], [122, "changes-to-clawutil"], [123, "changes-to-clawutil"], [124, "changes-to-clawutil"], [125, "changes-to-clawutil"], [126, "changes-to-clawutil"], [127, "changes-to-clawutil"], [128, "changes-to-clawutil"], [129, "changes-to-clawutil"], [130, "changes-to-clawutil"], [131, "changes-to-clawutil"], [132, "changes-to-clawutil"], [133, "changes-to-clawutil"], [134, "changes-to-clawutil"], [135, "changes-to-clawutil"], [136, "changes-to-clawutil"], [137, "changes-to-clawutil"]], "Changes to visclaw": [[20, "changes-to-visclaw"], [118, "changes-to-visclaw"], [119, "changes-to-visclaw"], [120, "changes-to-visclaw"], [121, "changes-to-visclaw"], [122, "changes-to-visclaw"], [123, "changes-to-visclaw"], [124, "changes-to-visclaw"], [125, "changes-to-visclaw"], [126, "changes-to-visclaw"], [127, "changes-to-visclaw"], [128, "changes-to-visclaw"], [129, "changes-to-visclaw"], [130, "changes-to-visclaw"], [131, "changes-to-visclaw"], [132, "changes-to-visclaw"], [133, "changes-to-visclaw"], [134, "changes-to-visclaw"], [135, "changes-to-visclaw"], [136, "changes-to-visclaw"], [137, "changes-to-visclaw"]], "Changes to riemann": [[20, "changes-to-riemann"], [118, "changes-to-riemann"], [119, "changes-to-riemann"], [120, "changes-to-riemann"], [121, "changes-to-riemann"], [122, "changes-to-riemann"], [123, "changes-to-riemann"], [124, "changes-to-riemann"], [125, "changes-to-riemann"], [126, "changes-to-riemann"], [127, "changes-to-riemann"], [128, "changes-to-riemann"], [129, "changes-to-riemann"], [130, "changes-to-riemann"], [131, "changes-to-riemann"], [132, "changes-to-riemann"], [133, "changes-to-riemann"], [134, "changes-to-riemann"], [135, "changes-to-riemann"], [136, "changes-to-riemann"], [137, "changes-to-riemann"]], "Changes to amrclaw": [[20, "changes-to-amrclaw"], [118, "changes-to-amrclaw"], [119, "changes-to-amrclaw"], [120, "changes-to-amrclaw"], [121, "changes-to-amrclaw"], [122, "changes-to-amrclaw"], [123, "changes-to-amrclaw"], [124, "changes-to-amrclaw"], [125, "changes-to-amrclaw"], [126, "changes-to-amrclaw"], [127, "changes-to-amrclaw"], [128, "changes-to-amrclaw"], [129, "changes-to-amrclaw"], [130, "changes-to-amrclaw"], [131, "changes-to-amrclaw"], [132, "changes-to-amrclaw"], [133, "changes-to-amrclaw"], [134, "changes-to-amrclaw"], [135, "changes-to-amrclaw"], [136, "changes-to-amrclaw"], [137, "changes-to-amrclaw"]], "Changes to geoclaw": [[20, "changes-to-geoclaw"], [118, "changes-to-geoclaw"], [119, "changes-to-geoclaw"], [120, "changes-to-geoclaw"], [121, "changes-to-geoclaw"], [122, "changes-to-geoclaw"], [123, "changes-to-geoclaw"], [124, "changes-to-geoclaw"], [125, "changes-to-geoclaw"], [126, "changes-to-geoclaw"], [127, "changes-to-geoclaw"], [128, "changes-to-geoclaw"], [129, "changes-to-geoclaw"], [130, "changes-to-geoclaw"], [131, "changes-to-geoclaw"], [132, "changes-to-geoclaw"], [133, "changes-to-geoclaw"], [134, "changes-to-geoclaw"], [135, "changes-to-geoclaw"], [136, "changes-to-geoclaw"], [137, "changes-to-geoclaw"]], "Changes to PyClaw": [[20, "changes-to-pyclaw"], [117, "changes-to-pyclaw"], [118, "changes-to-pyclaw"], [119, "changes-to-pyclaw"], [120, "changes-to-pyclaw"], [121, "changes-to-pyclaw"], [122, "changes-to-pyclaw"], [123, "changes-to-pyclaw"], [124, "changes-to-pyclaw"], [125, "changes-to-pyclaw"], [126, "changes-to-pyclaw"], [127, "changes-to-pyclaw"], [128, "changes-to-pyclaw"], [129, "changes-to-pyclaw"], [130, "changes-to-pyclaw"], [131, "changes-to-pyclaw"], [132, "changes-to-pyclaw"], [133, "changes-to-pyclaw"], [134, "changes-to-pyclaw"], [135, "changes-to-pyclaw"], [136, "changes-to-pyclaw"], [137, "changes-to-pyclaw"]], "Other Clawpack Repositories": [[20, "other-clawpack-repositories"], [118, "other-clawpack-repositories"], [126, "other-clawpack-repositories"], [127, "other-clawpack-repositories"], [128, "other-clawpack-repositories"], [129, "other-clawpack-repositories"], [130, "other-clawpack-repositories"], [131, "other-clawpack-repositories"], [132, "other-clawpack-repositories"], [133, "other-clawpack-repositories"], [134, "other-clawpack-repositories"], [135, "other-clawpack-repositories"], [136, "other-clawpack-repositories"], [137, "other-clawpack-repositories"]], "Converting from Clawpack 4.3 to 4.6": [[21, "converting-from-clawpack-4-3-to-4-6"]], "Converting from Clawpack 4.6 to 5.0": [[22, "converting-from-clawpack-4-6-to-5-0"]], "Python conversion tool": [[22, "python-conversion-tool"]], "Clawpack 4.x links": [[23, "clawpack-4-x-links"]], "Changes in Clawpack 5.0": [[24, "changes-in-clawpack-5-0"]], "PyClaw in 5.0": [[24, "pyclaw-in-5-0"]], "Fortran package changes": [[24, "fortran-package-changes"]], "Changes to input parameters in setrun.py from 4.x to 5.0": [[24, "changes-to-input-parameters-in-setrun-py-from-4-x-to-5-0"]], "Changes to general parameters": [[24, "changes-to-general-parameters"]], "Changes to AMR parameters": [[24, "changes-to-amr-parameters"]], "Changes to GeoClaw parameters": [[24, "changes-to-geoclaw-parameters"]], "Changes to plotting routines": [[24, "changes-to-plotting-routines"]], "Clawpack components": [[25, "clawpack-components"]], "Other repositories": [[25, "other-repositories"]], "Clawpack Community": [[26, "clawpack-community"]], "User Workshops, Clinics, and Tutorials": [[26, "user-workshops-clinics-and-tutorials"]], "Available for streaming": [[26, "available-for-streaming"]], "Upcoming": [[26, "upcoming"], [26, "id1"]], "Recent": [[26, "recent"]], "Developer Workshops and Sprint Sessions": [[26, "developer-workshops-and-sprint-sessions"]], "Previous": [[26, "previous"]], "Other Clawpack events": [[26, "other-clawpack-events"]], "Contents": [[27, "id1"], [30, "contents"], [42, "contents"], [70, "contents"], [82, "contents"], [88, "contents"], [98, "contents"], [104, "contents"], [116, "contents"], [142, "contents"]], "Full Table of Contents": [[27, "full-table-of-contents"]], "Overview and Getting Started": [[27, "overview-and-getting-started"]], "Examples and Applications": [[27, "examples-and-applications"]], "Classic, AMRClaw, and GeoClaw": [[27, "classic-amrclaw-and-geoclaw"]], "Using the Fortran codes": [[27, "using-the-fortran-codes"]], "AMRClaw: adaptive mesh refinement": [[27, "amrclaw-adaptive-mesh-refinement"]], "GeoClaw: geophysical flows": [[27, "geoclaw-geophysical-flows"]], "PyClaw": [[27, "pyclaw"], [38, "pyclaw"], [96, "pyclaw"], [116, "pyclaw"], [160, "pyclaw"]], "Riemann": [[27, "riemann"]], "VisClaw: Plotting and Visualization Tools": [[27, "visclaw-plotting-and-visualization-tools"]], "Migrating applications from older versions of Clawpack": [[27, "migrating-applications-from-older-versions-of-clawpack"]], "Developers\u2019 resources": [[27, "developers-resources"]], "References": [[27, "references"], [56, "references"]], "Contributing examples and applications": [[28, "contributing-examples-and-applications"]], "current_data": [[29, "current-data"]], "Attributes of current_data:": [[29, "attributes-of-current-data"]], "Developers\u2019 Guide": [[30, "developers-guide"]], "Guidelines for contributing": [[30, "guidelines-for-contributing"]], "Reporting and fixing bugs": [[30, "reporting-and-fixing-bugs"]], "Developer communication": [[30, "developer-communication"]], "Installation instructions for developers": [[30, "installation-instructions-for-developers"]], "Cloning the most recent code from Github": [[30, "cloning-the-most-recent-code-from-github"]], "Checking out the master branch on each repository": [[30, "checking-out-the-master-branch-on-each-repository"]], "Updating to the latest master branch": [[30, "updating-to-the-latest-master-branch"]], "Never commit to master": [[30, "never-commit-to-master"]], "Adding your fork as a remote": [[30, "adding-your-fork-as-a-remote"]], "Modifying code": [[30, "modifying-code"]], "Issuing a pull request": [[30, "issuing-a-pull-request"]], "Testing a pull request": [[30, "testing-a-pull-request"]], "Top-level pull requests": [[30, "top-level-pull-requests"]], "Git workflow": [[30, "git-workflow"]], "Catching errors with Pyflakes and Pylint": [[30, "catching-errors-with-pyflakes-and-pylint"]], "Checking test coverage": [[30, "checking-test-coverage"]], "Trouble-Shooting Tips": [[30, "trouble-shooting-tips"]], "Docker for Clawpack": [[31, "docker-for-clawpack"]], "Using Version 5.9.0 or above": [[31, "using-version-5-9-0-or-above"]], "Getting started": [[31, "getting-started"]], "Stopping a container": [[31, "stopping-a-container"]], "Restarting a container": [[31, "restarting-a-container"]], "Running Jupyter notebooks": [[31, "running-jupyter-notebooks"]], "Moving files between the docker container and the host machine": [[31, "moving-files-between-the-docker-container-and-the-host-machine"]], "Some other useful docker commands": [[31, "some-other-useful-docker-commands"]], "Creating your own docker image": [[31, "creating-your-own-docker-image"]], "Dockerfiles for binder": [[31, "dockerfiles-for-binder"]], "dtopotools module for moving topography": [[32, "dtopotools-module-for-moving-topography"]], "Documentation auto-generated from the module docstrings": [[32, "module-clawpack.geoclaw.dtopotools"], [35, "module-clawpack.geoclaw.fgmax_tools"], [37, "module-clawpack.geoclaw.fgout_tools"], [51, "module-clawpack.geoclaw.util"], [63, "module-clawpack.geoclaw.kmltools"], [164, "module-clawpack.geoclaw.topotools"]], "Fortran 77 vs. Fortran 90 files": [[33, "fortran-77-vs-fortran-90-files"]], "Fixed grid monitoring (fgmax)": [[34, "fixed-grid-monitoring-fgmax"]], "Input file specification": [[34, "input-file-specification"], [36, "input-file-specification"]], "Different point styles": [[34, "different-point-styles"]], "Other attributes": [[34, "other-attributes"]], "Values to monitor": [[34, "values-to-monitor"]], "Choice of interpolation procedure": [[34, "choice-of-interpolation-procedure"], [36, "choice-of-interpolation-procedure"]], "A simple example": [[34, "a-simple-example"], [36, "a-simple-example"]], "Processing and plotting fgmax output": [[34, "processing-and-plotting-fgmax-output"]], "Format of the output files": [[34, "format-of-the-output-files"]], "fgmax examples": [[34, "fgmax-examples"]], "fgmax_tools module for working with fgmax grids": [[35, "fgmax-tools-module-for-working-with-fgmax-grids"]], "Fixed grid output (fgout)": [[36, "fixed-grid-output-fgout"]], "Format of fgout output": [[36, "format-of-fgout-output"]], "Using setplot.py to produce plots": [[36, "using-setplot-py-to-produce-plots"]], "Reading and plotting fgout arrays directly": [[36, "reading-and-plotting-fgout-arrays-directly"]], "fgout grid registration": [[36, "fgout-grid-registration"]], "fgout examples": [[36, "fgout-examples"]], "fgout_tools module for working with fgout grids": [[37, "fgout-tools-module-for-working-with-fgout-grids"]], "Running an example": [[38, "running-an-example"], [39, "running-an-example"], [40, "running-an-example"]], "Classic": [[38, "classic"], [39, "classic"], [160, "classic"]], "Testing your Fortran installation and running an example": [[39, "testing-your-fortran-installation-and-running-an-example"]], "More examples": [[39, "more-examples"]], "Testing a PyClaw installation and running an example": [[40, "testing-a-pyclaw-installation-and-running-an-example"]], "From the Jupyter notebook": [[40, "from-the-jupyter-notebook"]], "From the IPython interpreter": [[40, "from-the-ipython-interpreter"]], "From the command line": [[40, "from-the-command-line"], [93, "from-the-command-line"]], "Specifying flagregions for adaptive refinement": [[41, "specifying-flagregions-for-adaptive-refinement"]], "Using ruled rectangles as flagregions": [[41, "using-ruled-rectangles-as-flagregions"]], "Force Cells to be Dry Initially": [[42, "force-cells-to-be-dry-initially"]], "Sample topography from a 1/3 arcsecond DEM": [[42, "sample-topography-from-a-1-3-arcsecond-dem"], [70, "sample-topography-from-a-1-3-arcsecond-dem"]], "Creating the force_dry_init array": [[42, "creating-the-force-dry-init-array"]], "Create file to read into GeoClaw": [[42, "create-file-to-read-into-geoclaw"]], "Usage in GeoClaw Fortran code": [[42, "usage-in-geoclaw-fortran-code"]], "Internal GeoClaw modifications": [[42, "internal-geoclaw-modifications"]], "Fortran version": [[43, "fortran-version"]], "Makefiles": [[43, "makefiles"]], "More tips": [[43, "more-tips"]], "Fortran Compilers": [[44, "fortran-compilers"]], "FC environment variable": [[44, "fc-environment-variable"]], "FFLAGS environment variable": [[44, "fflags-environment-variable"]], "LFLAGS environment variable": [[44, "lflags-environment-variable"]], "Pre-Processor and the PPFLAGS environment variable": [[44, "pre-processor-and-the-ppflags-environment-variable"]], "gfortran compiler": [[44, "gfortran-compiler"]], "Intel fortran compiler": [[44, "intel-fortran-compiler"]], "Examples from the book FVMHP": [[45, "examples-from-the-book-fvmhp"]], "Available examples": [[45, "available-examples"]], "YouTube Videos": [[45, "youtube-videos"]], "Clawpack Gallery": [[46, "clawpack-gallery"]], "Gauges": [[47, "gauges"]], "Gauge parameters in setrun": [[47, "gauge-parameters-in-setrun"]], "Plotting tools": [[47, "plotting-tools"]], "Plotting gauge locations": [[47, "plotting-gauge-locations"]], "GeoClaw Description and Detailed Contents": [[48, "geoclaw-description-and-detailed-contents"]], "GeoClaw in One Space Dimension": [[49, "geoclaw-in-one-space-dimension"]], "Coordinate systems": [[49, "coordinate-systems"]], "Uniform and mapped grids": [[49, "uniform-and-mapped-grids"]], "Topograpy data": [[49, "topograpy-data"]], "Moving topograpy (dtopo) data": [[49, "moving-topograpy-dtopo-data"]], "Getting started with GeoClaw": [[50, "getting-started-with-geoclaw"]], "Running a GeoClaw code": [[50, "running-a-geoclaw-code"]], "Topography": [[50, "topography"]], "Plotting GeoClaw results": [[50, "plotting-geoclaw-results"]], "Setting up a new example": [[50, "setting-up-a-new-example"]], "geoclaw.util module of utility functions": [[51, "geoclaw-util-module-of-utility-functions"]], "Cautionary Hints on using GeoClaw": [[52, "cautionary-hints-on-using-geoclaw"]], "Tsunami hazard modeling": [[52, "tsunami-hazard-modeling"]], "GeoClaw plotting tools": [[53, "geoclaw-plotting-tools"]], "Plotting water depth or surface elevation": [[53, "plotting-water-depth-or-surface-elevation"]], "Tips on latitude-longitude coordinate axes": [[53, "tips-on-latitude-longitude-coordinate-axes"]], "Keeping track of repository versions with Git": [[54, "keeping-track-of-repository-versions-with-git"]], "Visualizing GeoClaw results in Google Earth": [[55, "visualizing-geoclaw-results-in-google-earth"]], "Basic requirements": [[55, "basic-requirements"]], "Optional GDAL library": [[55, "optional-gdal-library"]], "An example : The Chile 2010 tsunami event": [[55, "an-example-the-chile-2010-tsunami-event"]], "Plotting attributes needed for Google Earth": [[55, "plotting-attributes-needed-for-google-earth"]], "plotdata attributes": [[55, "plotdata-attributes"]], "plotfigure attributes": [[55, "plotfigure-attributes"]], "Creating the figures": [[55, "creating-the-figures"]], "plotaxes attributes": [[55, "plotaxes-attributes"]], "plotitem attributes": [[55, "plotitem-attributes"]], "Adding a colorbar overlay": [[55, "adding-a-colorbar-overlay"]], "Gauge plots": [[55, "gauge-plots"]], "Additional plotdata attributes": [[55, "additional-plotdata-attributes"]], "Plotting tips": [[55, "plotting-tips"]], "KML and KMZ files": [[55, "kml-and-kmz-files"]], "Tiling images for faster loading": [[55, "tiling-images-for-faster-loading"]], "Removing aliasing artifacts": [[55, "removing-aliasing-artifacts"]], "Creating multiple figures at different resolutions": [[55, "creating-multiple-figures-at-different-resolutions"]], "Mapping topography data to latitude/longitude coordinates": [[55, "mapping-topography-data-to-latitude-longitude-coordinates"]], "Publishing your results": [[55, "id1"]], "Using the GPU version of Clawpack": [[56, "using-the-gpu-version-of-clawpack"]], "Grid registration": [[57, "grid-registration"]], "NetCDF files": [[57, "netcdf-files"]], "Guide for updating this documentation": [[58, "guide-for-updating-this-documentation"]], "Git branches and tags": [[58, "git-branches-and-tags"]], "Configuration and style files": [[58, "configuration-and-style-files"]], "Updating the docs for a new release": [[58, "updating-the-docs-for-a-new-release"]], "To generate docs including previous versions": [[58, "to-generate-docs-including-previous-versions"]], "Updating for a new major version": [[58, "updating-for-a-new-major-version"]], "Updating the gallery": [[58, "updating-the-gallery"]], "Updating the webpages": [[58, "updating-the-webpages"]], "Extra files for webpages not built by Sphinx": [[58, "extra-files-for-webpages-not-built-by-sphinx"]], "Pages from other clawpack repositories": [[58, "pages-from-other-clawpack-repositories"]], "Guide for doing a Clawpack release": [[59, "guide-for-doing-a-clawpack-release"]], "Preparation": [[59, "preparation"]], "Version numbers": [[59, "version-numbers"]], "Release candidates": [[59, "release-candidates"]], "Create a tar file and a Github release": [[59, "create-a-tar-file-and-a-github-release"]], "Final release": [[59, "final-release"]], "Pypi": [[59, "pypi"]], "Zenodo": [[59, "zenodo"]], "Open Science Framework (OSF)": [[59, "open-science-framework-osf"]], "Updating the documentation": [[59, "updating-the-documentation"]], "Updating the apps repository": [[59, "updating-the-apps-repository"]], "Updating the Dockerfile": [[59, "updating-the-dockerfile"]], "Installing Clawpack": [[60, "installing-clawpack"]], "Next steps:": [[60, "next-steps"], [61, "next-steps"], [62, "next-steps"]], "Options for installing Clawpack Fortran codes": [[61, "options-for-installing-clawpack-fortran-codes"]], "tar file": [[61, "tar-file"]], "git clone": [[61, "git-clone"]], "pip install instructions": [[62, "pip-install-instructions"]], "Quick Installation of PyClaw with pip": [[62, "quick-installation-of-pyclaw-with-pip"]], "Quick Installation of all packages with pip": [[62, "quick-installation-of-all-packages-with-pip"]], "Using pip to install a different version": [[62, "using-pip-to-install-a-different-version"]], "Experimenting with code in the examples directories": [[62, "experimenting-with-code-in-the-examples-directories"]], "Troubleshooting pip install": [[62, "troubleshooting-pip-install"]], "kmltools module of utility functions": [[63, "kmltools-module-of-utility-functions"]], "Lagrangian gauges for particle tracking": [[64, "lagrangian-gauges-for-particle-tracking"]], "Specifying Lagrangian Gauges": [[64, "specifying-lagrangian-gauges"]], "Visclaw tools for plotting": [[64, "visclaw-tools-for-plotting"]], "An alternative using fgout grids": [[64, "an-alternative-using-fgout-grids"]], "Clawpack Makefiles": [[66, "clawpack-makefiles"]], "Applications directory Makefiles": [[66, "applications-directory-makefiles"]], "output": [[66, "output"]], "plots": [[66, "plots"]], "Variables": [[66, "variables"]], "Compiler flags": [[66, "compiler-flags"]], "Duplicate Base Source Name": [[66, "duplicate-base-source-name"]], "Library routines in Makefiles": [[67, "library-routines-in-makefiles"]], "Replacing files with the same name as library files": [[67, "replacing-files-with-the-same-name-as-library-files"]], "Using a modified library routine with a different name": [[67, "using-a-modified-library-routine-with-a-different-name"]], "Manning friction term": [[68, "manning-friction-term"]], "The mapc2p function": [[69, "the-mapc2p-function"]], "Marching Front algorithm": [[70, "marching-front-algorithm"]], "Function arguments": [[70, "function-arguments"]], "output array": [[70, "output-array"]], "creating a masked array": [[70, "creating-a-masked-array"]], "topofile mask for initializing dry points": [[70, "topofile-mask-for-initializing-dry-points"]], "fgmax points": [[70, "fgmax-points"]], "flag regions": [[70, "flag-regions"]], "The mask argument": [[70, "the-mask-argument"]], "The previous_pts_chosen argument": [[70, "the-previous-pts-chosen-argument"]], "Finding all points below a given elevation": [[70, "finding-all-points-below-a-given-elevation"]], "Create a buffer zone along shore": [[70, "create-a-buffer-zone-along-shore"]], "Choose points only near shore": [[70, "choose-points-only-near-shore"]], "Write out the masked array indicating fgmax points": [[70, "write-out-the-masked-array-indicating-fgmax-points"]], "Creating an AMR flag region": [[70, "creating-an-amr-flag-region"]], "Determining dry areas below MHW": [[70, "determining-dry-areas-below-mhw"]], "Plotting using Matlab": [[71, "plotting-using-matlab"]], "The Matlab search path": [[71, "the-matlab-search-path"]], "Creating output files": [[71, "creating-output-files"]], "The plotclaw command": [[71, "the-plotclaw-command"]], "The setplot file": [[71, "the-setplot-file"]], "The afterframe file": [[71, "the-afterframe-file"]], "Getting help": [[71, "getting-help"]], "Trouble shooting": [[71, "trouble-shooting"]], "Output files not found": [[71, "output-files-not-found"]], "MaxFrames not set": [[71, "maxframes-not-set"]], "Switching examples": [[71, "switching-examples"]], "Matlab Gallery": [[71, "matlab-gallery"]], "Nearshore interpolation": [[72, "nearshore-interpolation"]], "Using NetCDF output": [[73, "using-netcdf-output"]], "Creating a new application directory": [[74, "creating-a-new-application-directory"]], "Copying an existing example": [[74, "copying-an-existing-example"]], "Earthquake sources: Fault slip and the Okada model": [[75, "earthquake-sources-fault-slip-and-the-okada-model"]], "Fault slip on rectangular subfaults": [[75, "fault-slip-on-rectangular-subfaults"]], "Okada model": [[75, "okada-model"]], "Kinematic rupture": [[75, "kinematic-rupture"]], "Fault slip on triangular subfaults": [[75, "fault-slip-on-triangular-subfaults"]], "Using OpenMP": [[76, "using-openmp"]], "Using OpenMP with AMR": [[76, "using-openmp-with-amr"]], "Fixed grid output in GeoClaw": [[76, "fixed-grid-output-in-geoclaw"]], "Output data sytles and formats": [[77, "output-data-sytles-and-formats"]], "Output style": [[77, "output-style"]], "Output data formats": [[77, "output-data-formats"]], "ASCII output data format": [[77, "ascii-output-data-format"]], "fort.t0002": [[77, "fort-t0002"]], "fort.q0002": [[77, "fort-q0002"]], "Raw binary output data formats": [[77, "raw-binary-output-data-formats"]], "NetCDF output data format": [[77, "netcdf-output-data-format"]], "Output of aux arrays": [[77, "output-of-aux-arrays"]], "Which Clawpack solver should I use?": [[78, "which-clawpack-solver-should-i-use"]], "Installation and user interface": [[78, "installation-and-user-interface"]], "Algorithmic differences": [[78, "algorithmic-differences"]], "Parallel computing": [[78, "parallel-computing"]], "Clawpack Community Photos": [[79, "clawpack-community-photos"]], "2016 Developers\u2019 workshop at University of Washington": [[79, "id1"]], "2015 Developers\u2019 workshop at University of Utah": [[79, "id2"]], "2014 HPC3 workshop at KAUST": [[79, "id3"]], "2013 Claw-Dev workshop at UW": [[79, "id4"]], "2012 HPC3 workshop at KAUST": [[79, "id6"]], "2011 coding sprints at UW": [[79, "coding-sprints-at-uw"]], "2010 GeoClaw hacking UW": [[79, "geoclaw-hacking-uw"]], "Plotting examples": [[80, "plotting-examples"]], "Plotting with Visclaw": [[81, "plotting-with-visclaw"]], "Plotting as post-processing": [[81, "plotting-as-post-processing"]], "Plotting on the fly": [[81, "plotting-on-the-fly"]], "Plotting hints and FAQ": [[82, "plotting-hints-and-faq"]], "What\u2019s the difference between make .plots and make plots ?": [[82, "what-s-the-difference-between-make-plots-and-make-plots"]], "How to plot a something other than a component of q?": [[82, "how-to-plot-a-something-other-than-a-component-of-q"]], "How to add another curve to a plot, e.g. the true solution?": [[82, "how-to-add-another-curve-to-a-plot-e-g-the-true-solution"]], "How to change the title in a plot?": [[82, "how-to-change-the-title-in-a-plot"]], "How to specify outdir, the directory to find fort.* files for plotting?": [[82, "how-to-specify-outdir-the-directory-to-find-fort-files-for-plotting"]], "How to specify a different outdir for some plot item?": [[82, "how-to-specify-a-different-outdir-for-some-plot-item"]], "How to set plot parameters that are not provided as attributes of ClawPlotItem?": [[82, "how-to-set-plot-parameters-that-are-not-provided-as-attributes-of-clawplotitem"]], "How to change the size or background color of a figure?": [[82, "how-to-change-the-size-or-background-color-of-a-figure"]], "Specifying colormaps for pcolor or contourf plots": [[82, "specifying-colormaps-for-pcolor-or-contourf-plots"]], "How to debug setplot.py?": [[82, "how-to-debug-setplot-py"]], "Plotting routines for GeoClaw": [[83, "plotting-routines-for-geoclaw"]], "Plotting options in Python": [[84, "plotting-options-in-python"]], "Producing html plots from the command line": [[84, "producing-html-plots-from-the-command-line"]], "Producing a latex file with plots from the command line": [[84, "producing-a-latex-file-with-plots-from-the-command-line"]], "Setting plot parameters with a setplot function": [[84, "setting-plot-parameters-with-a-setplot-function"]], "Interactive plotting with Iplotclaw": [[84, "interactive-plotting-with-iplotclaw"]], "Access to current_data": [[84, "access-to-current-data"]], "printframes": [[84, "printframes"]], "Specifying what and how to plot": [[84, "specifying-what-and-how-to-plot"]], "Installation Prerequisites": [[85, "installation-prerequisites"]], "Operating system": [[85, "operating-system"]], "Fortran": [[85, "fortran"]], "Python": [[85, "python"]], "pip": [[85, "pip"]], "Git": [[85, "git"]], "About PyClaw": [[86, "about-pyclaw"]], "Contributors": [[86, "contributors"]], "PyClaw Basics": [[87, "pyclaw-basics"]], "Understanding Pyclaw Classes": [[88, "understanding-pyclaw-classes"]], "Flow of a Pyclaw Simulation": [[88, "flow-of-a-pyclaw-simulation"]], "Creation of a Pyclaw Solution": [[88, "creation-of-a-pyclaw-solution"]], "Creation of a Pyclaw Solver": [[88, "creation-of-a-pyclaw-solver"]], "Creating and Running a Simulation with Controller": [[88, "creating-and-running-a-simulation-with-controller"]], "Restarting a simulation": [[88, "restarting-a-simulation"]], "Outputting aux values": [[88, "outputting-aux-values"]], "Outputting derived quantities": [[88, "outputting-derived-quantities"], [98, "outputting-derived-quantities"]], "Porting a problem from Clawpack 4.6.x to PyClaw": [[89, "porting-a-problem-from-clawpack-4-6-x-to-pyclaw"]], "Running PyClaw in the cloud": [[90, "running-pyclaw-in-the-cloud"]], "Sage Math Cloud": [[90, "sage-math-cloud"]], "Pyclaw Controller Class": [[91, "pyclaw-controller-class"]], "pyclaw.controller.Controller": [[91, "pyclaw-controller-controller"]], "Pyclaw Limiters": [[92, "pyclaw-limiters"]], "clawpack.pyclaw.limiters.tvd": [[92, "module-clawpack.pyclaw.limiters.tvd"]], "CFL Independent Limiters": [[92, "cfl-independent-limiters"]], "CFL Dependent Limiters": [[92, "cfl-dependent-limiters"]], "Working with PyClaw\u2019s built-in examples": [[93, "working-with-pyclaw-s-built-in-examples"]], "Running and plotting examples": [[93, "running-and-plotting-examples"]], "Interactively in IPython": [[93, "interactively-in-ipython"]], "Built-in examples": [[93, "built-in-examples"]], "Adding new examples": [[93, "adding-new-examples"]], "PyClaw Geometry": [[94, "pyclaw-geometry"]], "Serial Geometry Objects": [[94, "serial-geometry-objects"]], "pyclaw.geometry.Domain": [[94, "pyclaw-geometry-domain"]], "pyclaw.geometry.Patch": [[94, "pyclaw-geometry-patch"]], "pyclaw.geometry.Grid": [[94, "pyclaw-geometry-grid"]], "pyclaw.geometry.Dimension": [[94, "pyclaw-geometry-dimension"]], "Parallel Geometry Objects": [[94, "parallel-geometry-objects"]], "petclaw.geometry.Domain": [[94, "petclaw-geometry-domain"]], "petclaw.geometry.Patch": [[94, "petclaw-geometry-patch"]], "Going Further": [[95, "going-further"]], "PyClaw installation": [[96, "pyclaw-installation"]], "Features": [[96, "features"]], "PyClaw Documentation": [[96, "pyclaw-documentation"]], "PyClaw Modules reference documentation": [[96, "pyclaw-modules-reference-documentation"]], "Riemann Solvers reference documentation": [[96, "riemann-solvers-reference-documentation"]], "Indices and tables": [[96, "indices-and-tables"]], "Citing PyClaw": [[96, "citing-pyclaw"]], "Pyclaw Input/Output Package": [[97, "pyclaw-input-output-package"]], "pyclaw.fileio.ascii": [[97, "module-clawpack.pyclaw.fileio.ascii"]], "pyclaw.fileio.binary": [[97, "module-clawpack.pyclaw.fileio.binary"]], "pyclaw.fileio.hdf5": [[97, "module-clawpack.pyclaw.fileio.hdf5"]], "pyclaw.fileio.netcdf": [[97, "module-clawpack.pyclaw.fileio.netcdf"]], "PyClaw output": [[98, "pyclaw-output"]], "Output frames": [[98, "output-frames"]], "When output is saved/written": [[98, "when-output-is-saved-written"]], "Where and how output is written": [[98, "where-and-how-output-is-written"]], "What output is written": [[98, "what-output-is-written"]], "Outputting functionals": [[98, "outputting-functionals"]], "Using gauges": [[98, "using-gauges"]], "Logging": [[98, "logging"]], "Running in parallel": [[99, "running-in-parallel"]], "Installing PETSc": [[99, "installing-petsc"]], "Testing your installation": [[99, "testing-your-installation"], [160, "testing-your-installation"]], "Running and plotting an example": [[99, "running-and-plotting-an-example"]], "Tips for making your application run correctly in parallel": [[99, "tips-for-making-your-application-run-correctly-in-parallel"]], "Passing options to PETSc": [[99, "passing-options-to-petsc"]], "Plotting PyClaw results": [[100, "plotting-pyclaw-results"]], "Basics": [[100, "basics"]], "Plotting result from parallel runs": [[100, "plotting-result-from-parallel-runs"]], "Setting up your own problem": [[101, "setting-up-your-own-problem"]], "Writing the initialization script": [[101, "writing-the-initialization-script"]], "Setting initial conditions": [[101, "setting-initial-conditions"]], "Setting auxiliary variables": [[101, "setting-auxiliary-variables"]], "Setting boundary conditions": [[101, "setting-boundary-conditions"]], "Setting solver options": [[101, "setting-solver-options"]], "Using your own Riemann solver": [[101, "using-your-own-riemann-solver"]], "Adding source terms": [[101, "adding-source-terms"]], "Setting up the Makefile": [[101, "setting-up-the-makefile"]], "Riemann Solver Package": [[102, "riemann-solver-package"]], "Acoustics": [[102, "acoustics"]], "Advection": [[102, "advection"]], "Burgers Equation": [[102, "burgers-equation"]], "Euler Equations": [[102, "euler-equations"]], "Shallow Water Equations": [[102, "shallow-water-equations"]], "PyClaw Solutions": [[103, "pyclaw-solutions"]], "pyclaw.solution.Solution": [[103, "pyclaw-solution-solution"]], "Using PyClaw\u2019s solvers: Classic and SharpClaw": [[104, "using-pyclaw-s-solvers-classic-and-sharpclaw"]], "SharpClaw Solvers": [[104, "sharpclaw-solvers"]], "pyclaw.sharpclaw": [[104, "pyclaw-sharpclaw"]], "Pyclaw Classic Clawpack Solvers": [[104, "pyclaw-classic-clawpack-solvers"]], "pyclaw.classic.solver": [[104, "pyclaw-classic-solver"]], "Change to Custom BC Function Signatures": [[104, "change-to-custom-bc-function-signatures"]], "Installing PyClaw": [[105, "installing-pyclaw"]], "Dependencies: Python, gfortran, numpy, and matplotlib": [[105, "dependencies-python-gfortran-numpy-and-matplotlib"]], "Obtaining Python, numpy, and matplotlib": [[105, "obtaining-python-numpy-and-matplotlib"]], "Clawpack": [[105, "clawpack"]], "Testing your installation with nose": [[105, "testing-your-installation-with-nose"]], "Next steps": [[105, "next-steps"]], "PyClaw State": [[106, "pyclaw-state"]], "Serial pyclaw.state.State": [[106, "serial-pyclaw-state-state"]], "Parallel petclaw.state.State": [[106, "parallel-petclaw-state-state"]], "Troubleshooting": [[107, "troubleshooting"], [165, "troubleshooting"]], "Compilation errors": [[107, "compilation-errors"]], "Use Fortran-ordered arrays": [[107, "use-fortran-ordered-arrays"]], "Installation": [[107, "installation"]], "PyClaw tutorial: Solve the acoustics equations": [[108, "pyclaw-tutorial-solve-the-acoustics-equations"]], "The Solver": [[108, "the-solver"]], "The domain": [[108, "the-domain"]], "Initial condition": [[108, "initial-condition"]], "Problem-specific parameters": [[108, "problem-specific-parameters"]], "The controller": [[108, "the-controller"]], "Pyclaw Utility Module": [[109, "pyclaw-utility-module"]], "pyclaw.util": [[109, "module-clawpack.pyclaw.util"]], "Python Hints": [[110, "python-hints"]], "Dropping support for Python 2.7": [[110, "dropping-support-for-python-2-7"]], "References and tutorials": [[110, "references-and-tutorials"]], "Notebooks": [[110, "notebooks"]], "Python path": [[111, "python-path"]], "whichclaw.py": [[111, "whichclaw-py"]], "Which version was imported?": [[111, "which-version-was-imported"]], "sys.path": [[111, "sys-path"]], "easy-install.pth": [[111, "easy-install-pth"]], "PYTHONPATH": [[111, "pythonpath"], [146, "pythonpath"]], "qinit default routines": [[112, "qinit-default-routines"]], "qinit routine in GeoClaw": [[112, "qinit-routine-in-geoclaw"]], "Quick start guide for storm surge modeling": [[113, "quick-start-guide-for-storm-surge-modeling"]], "Quick start guide for tsunami modeling": [[114, "quick-start-guide-for-tsunami-modeling"]], "AMR refinement criteria": [[115, "amr-refinement-criteria"]], "Flagging criteria": [[115, "flagging-criteria"]], "flag2refine": [[115, "flag2refine"]], "Richardson extrapolation": [[115, "richardson-extrapolation"]], "Specifying AMR regions": [[115, "specifying-amr-regions"]], "Implementation": [[115, "implementation"]], "Flagging criteria in GeoClaw": [[115, "flagging-criteria-in-geoclaw"]], "Regression testing": [[116, "regression-testing"]], "Running the tests": [[116, "running-the-tests"], [116, "id2"]], "Fortran codes": [[116, "fortran-codes"]], "Travis continuous integration": [[116, "travis-continuous-integration"]], "Diff tools for checking test output": [[116, "diff-tools-for-checking-test-output"]], "chardiff tool for line-by-line comparison of output files": [[116, "chardiff-tool-for-line-by-line-comparison-of-output-files"]], "imagediff tool for pixel comparison of plots": [[116, "imagediff-tool-for-pixel-comparison-of-plots"]], "Running and writing tests in PyClaw": [[116, "running-and-writing-tests-in-pyclaw"]], "Running serial tests simultaneously": [[116, "running-serial-tests-simultaneously"]], "Running a specific test": [[116, "running-a-specific-test"]], "Doctests": [[116, "doctests"]], "Writing New Tests": [[116, "writing-new-tests"]], "v5.0.0 release notes": [[117, "v5-0-0-release-notes"]], "Changes to classic, riemann, amrclaw, geoclaw, visclaw": [[117, "changes-to-classic-riemann-amrclaw-geoclaw-visclaw"]], "v5.10.0 release notes": [[118, "v5-10-0-release-notes"]], "v5.1.0 release notes": [[119, "v5-1-0-release-notes"]], "v5.2.0 release notes": [[120, "v5-2-0-release-notes"]], "v5.2.1 release notes": [[121, "v5-2-1-release-notes"]], "v5.2.2 release notes": [[122, "v5-2-2-release-notes"]], "v5.3.0 release notes": [[123, "v5-3-0-release-notes"]], "v5.3.1 release notes": [[124, "v5-3-1-release-notes"]], "v5.4.0 release notes": [[125, "v5-4-0-release-notes"]], "Global changes": [[125, "global-changes"]], "v5.4.1 release notes": [[126, "v5-4-1-release-notes"]], "Changes to documentation": [[126, "changes-to-documentation"], [127, "changes-to-documentation"]], "v5.5.0 release notes": [[127, "v5-5-0-release-notes"]], "v5.6.0 release notes": [[128, "v5-6-0-release-notes"]], "v5.6.1 release notes": [[129, "v5-6-1-release-notes"]], "v5.7.0 release notes": [[130, "v5-7-0-release-notes"]], "Python support": [[130, "python-support"]], "v5.7.1 release notes": [[131, "v5-7-1-release-notes"]], "v5.8.0 release notes": [[132, "v5-8-0-release-notes"]], "v5.8.1 release notes": [[133, "v5-8-1-release-notes"]], "v5.8.2 release notes": [[134, "v5-8-2-release-notes"]], "v5.9.0 release notes": [[135, "v5-9-0-release-notes"]], "v5.9.1 release notes": [[136, "v5-9-1-release-notes"]], "v5.9.2 release notes": [[137, "v5-9-2-release-notes"]], "Releases of Clawpack and release notes": [[138, "releases-of-clawpack-and-release-notes"]], "Other notes:": [[138, "other-notes"]], "Releases:": [[138, "id1"]], "Clawpack 4.x": [[138, "clawpack-4-x"]], "Checkpointing and restarting": [[139, "checkpointing-and-restarting"]], "Checkpointing a computation": [[139, "checkpointing-a-computation"]], "Restarting a computation": [[139, "restarting-a-computation"]], "Modifying the Makefile for a restart": [[139, "modifying-the-makefile-for-a-restart"]], "Output files after a restart": [[139, "output-files-after-a-restart"]], "Riemann solvers": [[140, "riemann-solvers"]], "One-dimensional Riemann solver": [[140, "one-dimensional-riemann-solver"]], "Pointwise Riemann solvers": [[140, "pointwise-riemann-solvers"]], "f-wave Riemann solvers": [[140, "f-wave-riemann-solvers"]], "2D Riemann solvers": [[140, "d-riemann-solvers"]], "Using a custom solver": [[140, "using-a-custom-solver"]], "Adding a solver to the Riemann repository": [[140, "adding-a-solver-to-the-riemann-repository"]], "Shallow water Riemann solvers in Clawpack": [[141, "shallow-water-riemann-solvers-in-clawpack"]], "One dimension": [[141, "one-dimension"]], "Two dimensions": [[141, "two-dimensions"]], "Layered shallow water equations": [[141, "layered-shallow-water-equations"]], "Potentially useful contributions (what\u2019s missing)": [[141, "potentially-useful-contributions-whats-missing"]], "Demonstrations": [[141, "demonstrations"]], "Roe": [[141, "roe"]], "HLL": [[141, "hll"]], "Ruled Rectangles": [[142, "ruled-rectangles"]], "Relation to convex polygons": [[142, "relation-to-convex-polygons"]], "Other attributes and methods": [[142, "other-attributes-and-methods"]], "ds": [[142, "ds"]], "slu": [[142, "slu"]], "bounding_box": [[142, "bounding-box"]], "mask_outside": [[142, "mask-outside"]], "read and write, and instantiating from a file": [[142, "read-and-write-and-instantiating-from-a-file"]], "make_kml": [[142, "make-kml"]], "A GeoClaw AMR flag region": [[142, "a-geoclaw-amr-flag-region"]], "A simple rectangle": [[142, "a-simple-rectangle"]], "Defining a Ruled Rectangle covering selected cells": [[142, "defining-a-ruled-rectangle-covering-selected-cells"]], "Example covering the continental shelf": [[142, "example-covering-the-continental-shelf"]], "Setting sea_level": [[143, "setting-sea-level"]], "Set Eta Init \u2013 spatially varying initial surface elevation": [[144, "set-eta-init-spatially-varying-initial-surface-elevation"]], "Default behavior, adjusting sea level by seismic deformation": [[144, "default-behavior-adjusting-sea-level-by-seismic-deformation"]], "Other use cases": [[144, "other-use-cases"]], "setaux default routines": [[145, "setaux-default-routines"]], "setaux routine in GeoClaw": [[145, "setaux-routine-in-geoclaw"]], "Set environment variables": [[146, "set-environment-variables"]], "CLAW": [[146, "claw"]], "FC": [[146, "fc"]], "Using setplot.py to specify the desired plots": [[147, "using-setplot-py-to-specify-the-desired-plots"]], "Plotting Data Objects": [[147, "plotting-data-objects"]], "Overview": [[147, "overview"]], "Specifying classic run-time parameters in setrun.py": [[148, "specifying-classic-run-time-parameters-in-setrun-py"]], "Input": [[148, "input"], [149, "input"]], "Output": [[148, "output"], [149, "output"]], "Run-time parameters": [[148, "run-time-parameters"], [149, "run-time-parameters"]], "Specifying AMRClaw run-time parameters in setrun.py": [[149, "specifying-amrclaw-run-time-parameters-in-setrun-py"]], "Special AMR parameters": [[149, "special-amr-parameters"]], "Debugging flags for additional printing": [[149, "debugging-flags-for-additional-printing"]], "Sample setrun.py module for AMRClaw": [[150, "sample-setrun-py-module-for-amrclaw"]], "Specifying GeoClaw parameters in setrun.py": [[151, "specifying-geoclaw-parameters-in-setrun-py"]], "Additional AMR parameters": [[151, "additional-amr-parameters"]], "General geo parameters": [[151, "general-geo-parameters"]], "Topography data file parameters": [[151, "topography-data-file-parameters"]], "qinit data file parameters": [[151, "qinit-data-file-parameters"]], "Force some cells to be initially dry": [[151, "force-some-cells-to-be-initially-dry"]], "Adjust sea level in some regions": [[151, "adjust-sea-level-in-some-regions"]], "AMR refinement region parameters": [[151, "amr-refinement-region-parameters"]], "Deprecated Fixedgrid output parameters": [[151, "deprecated-fixedgrid-output-parameters"]], "Fixed grid maximum monitoring / arrival times": [[151, "fixed-grid-maximum-monitoring-arrival-times"]], "Fixed grid output": [[151, "fixed-grid-output"]], "Storm Specification Data": [[151, "storm-specification-data"]], "Sample setrun.py module for classic Clawpack": [[152, "sample-setrun-py-module-for-classic-clawpack"]], "Saving and sharing results": [[153, "saving-and-sharing-results"]], "Making webpages of plots": [[153, "making-webpages-of-plots"]], "Sharing your results": [[153, "sharing-your-results"]], "Jupyter notebooks": [[153, "jupyter-notebooks"]], "Source terms for shallow water on the sphere": [[154, "source-terms-for-shallow-water-on-the-sphere"]], "Compiling the Sphinx documentation locally": [[155, "compiling-the-sphinx-documentation-locally"]], "src1d default routines": [[156, "src1d-default-routines"]], "src1d routine in GeoClaw": [[156, "src1d-routine-in-geoclaw"]], "src default routines": [[157, "src-default-routines"]], "src routine in GeoClaw": [[157, "src-routine-in-geoclaw"]], "Storm Specification Class and Tools": [[158, "storm-specification-class-and-tools"]], "Sources for Storm Surge Data": [[159, "sources-for-storm-surge-data"]], "Timing Statistics": [[161, "timing-statistics"]], "Topography data": [[162, "topography-data"]], "Downloading topography files": [[162, "downloading-topography-files"]], "NetCDF format": [[162, "netcdf-format"]], "Topography displacement files": [[162, "topography-displacement-files"]], "qinit data file": [[162, "qinit-data-file"]], "Python tools for working with topo and dtopo": [[163, "python-tools-for-working-with-topo-and-dtopo"]], "topotools module for working with topography data": [[164, "topotools-module-for-working-with-topography-data"]], "Troubleshooting Installation": [[165, "troubleshooting-installation"]], "Troubleshooting Fortran:": [[165, "troubleshooting-fortran"]], "Setting the Fortran compiler to be used by f2py (pip)": [[165, "setting-the-fortran-compiler-to-be-used-by-f2py-pip"]], "Trouble compiling Fortran code at the command line": [[165, "trouble-compiling-fortran-code-at-the-command-line"]], "Trouble running \u201cmake .exe\u201d": [[165, "trouble-running-make-exe"]], "Trouble running \u201cmake .data\u201d": [[165, "trouble-running-make-data"]], "Trouble running \u201cmake .output\u201d": [[165, "trouble-running-make-output"]], "Trouble running \u201cmake .plots\u201d": [[165, "trouble-running-make-plots"]], "Some sources of tsunami data": [[166, "some-sources-of-tsunami-data"]], "Topography / bathymetry": [[166, "topography-bathymetry"]], "Earthquake source models": [[166, "earthquake-source-models"]], "DART buoy data": [[166, "dart-buoy-data"]], "Tide gauges": [[166, "tide-gauges"]], "User files required for the Fortran code": [[167, "user-files-required-for-the-fortran-code"]], "Specifying the initial conditions": [[167, "specifying-the-initial-conditions"]], "Specifying the Riemann solver": [[167, "specifying-the-riemann-solver"]], "Specifying boundary conditions": [[167, "specifying-boundary-conditions"]], "Specifying problem-specific data": [[167, "specifying-problem-specific-data"]], "Specifying spatially-varying data using setaux": [[167, "specifying-spatially-varying-data-using-setaux"]], "Using b4step for work to be done before each time step": [[167, "using-b4step-for-work-to-be-done-before-each-time-step"]], "Using src for source terms": [[167, "using-src-for-source-terms"]], "Using src1d for source terms with AMRClaw": [[167, "using-src1d-for-source-terms-with-amrclaw"]], "Plotting with VisIt": [[168, "plotting-with-visit"]], "Clawpack Virtual Machine": [[169, "clawpack-virtual-machine"]], "Wave-propagation algorithms": [[170, "wave-propagation-algorithms"]], "One space dimension": [[170, "one-space-dimension"]], "Godunov\u2019s method": [[170, "godunov-s-method"]], "High-resolution methods": [[170, "high-resolution-methods"]], "f-wave formulation": [[170, "f-wave-formulation"]], "Capacity functions": [[170, "capacity-functions"]], "Source terms": [[170, "source-terms"]]}, "indexentries": {"clawplotaxes (built-in class)": [[0, "ClawPlotAxes"]], "gethandle()": [[0, "gethandle"], [2, "gethandle"], [3, "gethandle"]], "new_plotitem()": [[0, "new_plotitem"]], "clawplotdata (built-in class)": [[1, "ClawPlotData"]], "clearfigures()": [[1, "clearfigures"]], "clearframes()": [[1, "clearframes"]], "getaxes()": [[1, "getaxes"]], "getfigure()": [[1, "getfigure"]], "getframe()": [[1, "getframe"], [3, "getframe"]], "getitem()": [[1, "getitem"]], "iplotclaw()": [[1, "iplotclaw"]], "new_plotfigure()": [[1, "new_plotfigure"]], "plotframe()": [[1, "plotframe"]], "printframes()": [[1, "printframes"]], "showitems()": [[1, "showitems"]], "clawplotfigure (built-in class)": [[2, "ClawPlotFigure"]], "new_plotaxes()": [[2, "new_plotaxes"]], "clawplotitem (built-in class)": [[3, "ClawPlotItem"]], "csvfault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.CSVFault"]], "dtopography (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.DTopography"]], "dtopography1d (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.DTopography1d"]], "fault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.Fault"]], "fault1d (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.Fault1d"]], "mo() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.Mo"]], "mo() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.Mo"]], "mw() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.Mw"]], "mw() (in module clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.Mw"]], "siftfault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.SiftFault"]], "subfault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.SubFault"]], "subfault1d (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d"]], "subdividedplanefault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.SubdividedPlaneFault"]], "tensorproductfault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.TensorProductFault"]], "ucsbfault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.UCSBFault"]], "calculate_geometry() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.calculate_geometry"]], "calculate_geometry_triangles() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.calculate_geometry_triangles"]], "centers (clawpack.geoclaw.dtopotools.subfault property)": [[32, "clawpack.geoclaw.dtopotools.SubFault.centers"]], "clawpack.geoclaw.dtopotools": [[32, "module-clawpack.geoclaw.dtopotools"]], "containing_rect() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.containing_rect"]], "convert_to_standard_units() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.convert_to_standard_units"]], "coordinate_specification (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.coordinate_specification"]], "coordinate_specification (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.coordinate_specification"]], "corners (clawpack.geoclaw.dtopotools.subfault property)": [[32, "clawpack.geoclaw.dtopotools.SubFault.corners"]], "create_dtopo_xy() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.create_dtopo_xy"]], "create_dtopography() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.create_dtopography"]], "dz_at_t() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.dZ_at_t"]], "dz_at_t() (clawpack.geoclaw.dtopotools.dtopography1d method)": [[32, "clawpack.geoclaw.dtopotools.DTopography1d.dZ_at_t"]], "dz_cellave_at_t() (clawpack.geoclaw.dtopotools.dtopography1d method)": [[32, "clawpack.geoclaw.dtopotools.DTopography1d.dZ_cellave_at_t"]], "dz_max() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.dZ_max"]], "depth (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.depth"]], "dip (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.dip"]], "dynamic_slip() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.dynamic_slip"]], "gauss_pts (clawpack.geoclaw.dtopotools.subfault property)": [[32, "clawpack.geoclaw.dtopotools.SubFault.gauss_pts"]], "latitude (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.latitude"]], "latitude (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.latitude"]], "length (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.length"]], "length (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.length"]], "longitude (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.longitude"]], "longitude (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.longitude"]], "module": [[32, "module-clawpack.geoclaw.dtopotools"], [35, "module-clawpack.geoclaw.fgmax_tools"], [37, "module-clawpack.geoclaw.fgout_tools"], [51, "module-clawpack.geoclaw.util"], [63, "module-clawpack.geoclaw.kmltools"], [92, "module-clawpack.pyclaw.limiters.tvd"], [97, "module-clawpack.pyclaw.fileio.ascii"], [97, "module-clawpack.pyclaw.fileio.binary"], [97, "module-clawpack.pyclaw.fileio.hdf5"], [97, "module-clawpack.pyclaw.fileio.netcdf"], [102, "module-clawpack.riemann.acoustics_1D_py"], [102, "module-clawpack.riemann.advection_1D_py"], [102, "module-clawpack.riemann.burgers_1D_py"], [102, "module-clawpack.riemann.euler_1D_py"], [102, "module-clawpack.riemann.shallow_1D_py"], [109, "module-clawpack.pyclaw.util"], [158, "module-clawpack.geoclaw.surge.storm"], [164, "module-clawpack.geoclaw.topotools"]], "mu (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.mu"]], "okada() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.okada"]], "plot_dz_colors() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.plot_dZ_colors"]], "plot_dz_colors() (in module clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.plot_dZ_colors"]], "plot_dz_contours() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.plot_dZ_contours"]], "plot_dz_contours() (in module clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.plot_dZ_contours"]], "plot_subfaults() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.plot_subfaults"]], "plot_subfaults_depth() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.plot_subfaults_depth"]], "rake (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rake"]], "rake (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.rake"]], "read() (clawpack.geoclaw.dtopotools.csvfault method)": [[32, "clawpack.geoclaw.dtopotools.CSVFault.read"]], "read() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.read"]], "read() (clawpack.geoclaw.dtopotools.dtopography1d method)": [[32, "clawpack.geoclaw.dtopotools.DTopography1d.read"]], "read() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.read"]], "read() (clawpack.geoclaw.dtopotools.ucsbfault method)": [[32, "clawpack.geoclaw.dtopotools.UCSBFault.read"]], "rise_fraction() (in module clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.rise_fraction"]], "rise_shape (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rise_shape"]], "rise_time (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rise_time"]], "rise_time_starting (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rise_time_starting"]], "rupture_time (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rupture_time"]], "rupture_type (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rupture_type"]], "set_corners() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.set_corners"]], "set_dynamic_slip() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.set_dynamic_slip"]], "set_subfaults() (clawpack.geoclaw.dtopotools.siftfault method)": [[32, "clawpack.geoclaw.dtopotools.SiftFault.set_subfaults"]], "slip (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.slip"]], "strike (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.strike"]], "strike (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.strike"]], "strike_direction() (in module clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.strike_direction"]], "subdivide() (clawpack.geoclaw.dtopotools.subdividedplanefault method)": [[32, "clawpack.geoclaw.dtopotools.SubdividedPlaneFault.subdivide"]], "width (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.width"]], "write() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.write"]], "write() (clawpack.geoclaw.dtopotools.dtopography1d method)": [[32, "clawpack.geoclaw.dtopotools.DTopography1d.write"]], "write() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.write"]], "fgmaxgrid (class in clawpack.geoclaw.fgmax_tools)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid"]], "adjust_fgmax_1d() (in module clawpack.geoclaw.fgmax_tools)": [[35, "clawpack.geoclaw.fgmax_tools.adjust_fgmax_1d"]], "bounding_box() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.bounding_box"]], "clawpack.geoclaw.fgmax_tools": [[35, "module-clawpack.geoclaw.fgmax_tools"]], "interp_dz() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.interp_dz"]], "ps4_to_arrays() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.ps4_to_arrays"]], "read_fgmax_grids_data() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.read_fgmax_grids_data"]], "read_output() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.read_output"]], "write_to_fgmax_data() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.write_to_fgmax_data"]], "b (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.B"]], "fgoutframe (class in clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame"]], "fgoutgrid (class in clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid"]], "x (clawpack.geoclaw.fgout_tools.fgoutgrid property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.X"], [37, "clawpack.geoclaw.fgout_tools.FGoutGrid.x"]], "y (clawpack.geoclaw.fgout_tools.fgoutgrid property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.Y"], [37, "clawpack.geoclaw.fgout_tools.FGoutGrid.y"]], "clawpack.geoclaw.fgout_tools": [[37, "module-clawpack.geoclaw.fgout_tools"]], "eta (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.eta"]], "extent_centers (clawpack.geoclaw.fgout_tools.fgoutgrid property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.extent_centers"]], "extent_edges (clawpack.geoclaw.fgout_tools.fgoutgrid property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.extent_edges"]], "get_as_array() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.get_as_array"]], "h (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.h"]], "hss (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.hss"]], "hu (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.hu"]], "hv (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.hv"]], "make_fgout_fcn_xy() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.make_fgout_fcn_xy"]], "make_fgout_fcn_xyt() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.make_fgout_fcn_xyt"]], "print_netcdf_info() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.print_netcdf_info"]], "read_fgout_grids_data() (clawpack.geoclaw.fgout_tools.fgoutgrid method)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.read_fgout_grids_data"]], "read_frame() (clawpack.geoclaw.fgout_tools.fgoutgrid method)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.read_frame"]], "read_netcdf() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.read_netcdf"]], "read_netcdf_arrays() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.read_netcdf_arrays"]], "s (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.s"]], "set_plotdata() (clawpack.geoclaw.fgout_tools.fgoutgrid method)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.set_plotdata"]], "u (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.u"]], "v (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.v"]], "write_netcdf() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.write_netcdf"]], "write_to_fgout_data() (clawpack.geoclaw.fgout_tools.fgoutgrid method)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.write_to_fgout_data"]], "bearing() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.bearing"]], "clawpack.geoclaw.util": [[51, "module-clawpack.geoclaw.util"]], "dist_latlong2meters() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.dist_latlong2meters"]], "dist_meters2latlong() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.dist_meters2latlong"]], "dms2decimal() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.dms2decimal"]], "fetch_noaa_tide_data() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.fetch_noaa_tide_data"]], "gctransect() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.gctransect"]], "haversine() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.haversine"]], "inv_haversine() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.inv_haversine"]], "box2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.box2kml"]], "clawpack.geoclaw.kmltools": [[63, "module-clawpack.geoclaw.kmltools"]], "deg2dms() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.deg2dms"]], "dtopo2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.dtopo2kml"]], "f2s() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.f2s"]], "fgmax2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.fgmax2kml"]], "fgout2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.fgout2kml"]], "gauges2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.gauges2kml"]], "kml_build_colorbar() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.kml_build_colorbar"]], "kml_cb() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.kml_cb"]], "kml_png() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.kml_png"]], "kml_timespan() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.kml_timespan"]], "line2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.line2kml"]], "make_input_data_kmls() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.make_input_data_kmls"]], "pcolorcells_for_kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.pcolorcells_for_kml"]], "png2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.png2kml"]], "poly2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.poly2kml"]], "quad2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.quad2kml"]], "regions2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.regions2kml"]], "topo2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.topo2kml"]], "topo2kmz() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.topo2kmz"]], "transect2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.transect2kml"]], "controller (class in clawpack.pyclaw.controller)": [[91, "clawpack.pyclaw.controller.Controller"]], "f_file_name (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.F_file_name"]], "f_path (clawpack.pyclaw.controller.controller property)": [[91, "clawpack.pyclaw.controller.Controller.F_path"]], "check_validity() (clawpack.pyclaw.controller.controller method)": [[91, "clawpack.pyclaw.controller.Controller.check_validity"]], "compute_f (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.compute_F"]], "compute_p (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.compute_p"]], "file_prefix_p (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.file_prefix_p"]], "frames (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.frames"]], "keep_copy (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.keep_copy"]], "nstepout (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.nstepout"]], "num_output_times (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.num_output_times"]], "out_times (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.out_times"]], "outdir (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.outdir"]], "outdir_p (clawpack.pyclaw.controller.controller property)": [[91, "clawpack.pyclaw.controller.Controller.outdir_p"]], "output_file_prefix (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.output_file_prefix"]], "output_format (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.output_format"]], "output_options (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.output_options"]], "output_style (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.output_style"]], "overwrite (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.overwrite"]], "plot() (clawpack.pyclaw.controller.controller method)": [[91, "clawpack.pyclaw.controller.Controller.plot"]], "plotdata (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.plotdata"]], "run() (clawpack.pyclaw.controller.controller method)": [[91, "clawpack.pyclaw.controller.Controller.run"]], "rundir (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.rundir"]], "runmake (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.runmake"]], "savecode (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.savecode"]], "solver (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.solver"]], "tfinal (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.tfinal"]], "verbosity (clawpack.pyclaw.controller.controller property)": [[91, "clawpack.pyclaw.controller.Controller.verbosity"]], "viewable_attributes (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.viewable_attributes"]], "write_aux_always (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.write_aux_always"]], "write_aux_init (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.write_aux_init"]], "xclawcmd (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.xclawcmd"]], "xclawerr (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.xclawerr"]], "xclawout (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.xclawout"]], "xdir (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.xdir"]], "arora_roe() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.arora_roe"]], "beta_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.beta_limiter"]], "cada_torrilhon_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.cada_torrilhon_limiter"]], "cada_torrilhon_limiter_nonlinear() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.cada_torrilhon_limiter_nonlinear"]], "cfl_superbee() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.cfl_superbee"]], "cfl_superbee_theta() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.cfl_superbee_theta"]], "clawpack.pyclaw.limiters.tvd": [[92, "module-clawpack.pyclaw.limiters.tvd"]], "hyperbee_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.hyperbee_limiter"]], "limit() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.limit"]], "mc_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.mc_limiter"]], "minmod_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.minmod_limiter"]], "superbee_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.superbee_limiter"]], "superpower_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.superpower_limiter"]], "theta_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.theta_limiter"]], "upper_bound_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.upper_bound_limiter"]], "van_leer_klein_sharpening_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.van_leer_klein_sharpening_limiter"]], "dimension (class in clawpack.pyclaw.geometry)": [[94, "clawpack.pyclaw.geometry.Dimension"]], "domain (class in clawpack.petclaw.geometry)": [[94, "clawpack.petclaw.geometry.Domain"]], "domain (class in clawpack.pyclaw.geometry)": [[94, "clawpack.pyclaw.geometry.Domain"]], "grid (class in clawpack.pyclaw.geometry)": [[94, "clawpack.pyclaw.geometry.Grid"]], "patch (class in clawpack.petclaw.geometry)": [[94, "clawpack.petclaw.geometry.Patch"]], "patch (class in clawpack.pyclaw.geometry)": [[94, "clawpack.pyclaw.geometry.Patch"]], "add_dimension() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.add_dimension"]], "add_dimension() (clawpack.pyclaw.geometry.patch method)": [[94, "clawpack.pyclaw.geometry.Patch.add_dimension"]], "add_gauges() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.add_gauges"]], "c_center() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.c_center"]], "c_centers (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.c_centers"]], "c_centers_with_ghost() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.c_centers_with_ghost"]], "c_nodes (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.c_nodes"]], "c_nodes_with_ghost() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.c_nodes_with_ghost"]], "centers (clawpack.pyclaw.geometry.dimension property)": [[94, "clawpack.pyclaw.geometry.Dimension.centers"]], "centers_with_ghost() (clawpack.pyclaw.geometry.dimension method)": [[94, "clawpack.pyclaw.geometry.Dimension.centers_with_ghost"]], "delta (clawpack.pyclaw.geometry.dimension property)": [[94, "clawpack.pyclaw.geometry.Dimension.delta"]], "delta (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.delta"]], "dimensional_split (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.dimensional_split"]], "dimensions (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.dimensions"]], "dimensions (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.dimensions"]], "fwave (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.fwave"]], "gauge_dir_name (clawpack.pyclaw.geometry.grid attribute)": [[94, "clawpack.pyclaw.geometry.Grid.gauge_dir_name"]], "gauge_file_names (clawpack.pyclaw.geometry.grid attribute)": [[94, "clawpack.pyclaw.geometry.Grid.gauge_file_names"]], "gauge_files (clawpack.pyclaw.geometry.grid attribute)": [[94, "clawpack.pyclaw.geometry.Grid.gauge_files"]], "gauges (clawpack.pyclaw.geometry.grid attribute)": [[94, "clawpack.pyclaw.geometry.Grid.gauges"]], "get_dim_attribute() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.get_dim_attribute"]], "get_dim_attribute() (clawpack.pyclaw.geometry.patch method)": [[94, "clawpack.pyclaw.geometry.Patch.get_dim_attribute"]], "grid (clawpack.pyclaw.geometry.domain property)": [[94, "clawpack.pyclaw.geometry.Domain.grid"]], "kernel_language (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.kernel_language"]], "level (clawpack.pyclaw.geometry.patch attribute)": [[94, "clawpack.pyclaw.geometry.Patch.level"]], "lower_global (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.lower_global"]], "mthlim (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.mthlim"]], "name (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.name"]], "nodes (clawpack.pyclaw.geometry.dimension property)": [[94, "clawpack.pyclaw.geometry.Dimension.nodes"]], "nodes_with_ghost() (clawpack.pyclaw.geometry.dimension method)": [[94, "clawpack.pyclaw.geometry.Dimension.nodes_with_ghost"]], "num_cells_global (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.num_cells_global"]], "num_dim (clawpack.pyclaw.geometry.domain property)": [[94, "clawpack.pyclaw.geometry.Domain.num_dim"]], "num_dim (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.num_dim"]], "num_dim (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.num_dim"]], "order (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.order"]], "p_center() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.p_center"]], "p_centers (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.p_centers"]], "p_nodes (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.p_nodes"]], "patch (clawpack.pyclaw.geometry.domain property)": [[94, "clawpack.pyclaw.geometry.Domain.patch"]], "patch_index (clawpack.pyclaw.geometry.patch attribute)": [[94, "clawpack.pyclaw.geometry.Patch.patch_index"]], "plot() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.plot"]], "setup_gauge_files() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.setup_gauge_files"]], "source_split (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.source_split"]], "step_source (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.step_source"]], "transverse_waves (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.transverse_waves"]], "upper_global (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.upper_global"]], "verbosity (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.verbosity"]], "clawpack.pyclaw.fileio.ascii": [[97, "module-clawpack.pyclaw.fileio.ascii"]], "clawpack.pyclaw.fileio.binary": [[97, "module-clawpack.pyclaw.fileio.binary"]], "clawpack.pyclaw.fileio.hdf5": [[97, "module-clawpack.pyclaw.fileio.hdf5"]], "clawpack.pyclaw.fileio.netcdf": [[97, "module-clawpack.pyclaw.fileio.netcdf"]], "read() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.read"]], "read() (in module clawpack.pyclaw.fileio.binary)": [[97, "clawpack.pyclaw.fileio.binary.read"]], "read() (in module clawpack.pyclaw.fileio.hdf5)": [[97, "clawpack.pyclaw.fileio.hdf5.read"]], "read() (in module clawpack.pyclaw.fileio.netcdf)": [[97, "clawpack.pyclaw.fileio.netcdf.read"]], "read_array() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.read_array"]], "read_patch_header() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.read_patch_header"]], "read_t() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.read_t"]], "write() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.write"]], "write() (in module clawpack.pyclaw.fileio.hdf5)": [[97, "clawpack.pyclaw.fileio.hdf5.write"]], "write() (in module clawpack.pyclaw.fileio.netcdf)": [[97, "clawpack.pyclaw.fileio.netcdf.write"]], "write_array() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.write_array"]], "acoustics_1d() (in module clawpack.riemann.acoustics_1d_py)": [[102, "clawpack.riemann.acoustics_1D_py.acoustics_1D"]], "advection_1d() (in module clawpack.riemann.advection_1d_py)": [[102, "clawpack.riemann.advection_1D_py.advection_1D"]], "burgers_1d() (in module clawpack.riemann.burgers_1d_py)": [[102, "clawpack.riemann.burgers_1D_py.burgers_1D"]], "clawpack.riemann.acoustics_1d_py": [[102, "module-clawpack.riemann.acoustics_1D_py"]], "clawpack.riemann.advection_1d_py": [[102, "module-clawpack.riemann.advection_1D_py"]], "clawpack.riemann.burgers_1d_py": [[102, "module-clawpack.riemann.burgers_1D_py"]], "clawpack.riemann.euler_1d_py": [[102, "module-clawpack.riemann.euler_1D_py"]], "clawpack.riemann.shallow_1d_py": [[102, "module-clawpack.riemann.shallow_1D_py"]], "euler_exact_1d() (in module clawpack.riemann.euler_1d_py)": [[102, "clawpack.riemann.euler_1D_py.euler_exact_1D"]], "euler_hll_1d() (in module clawpack.riemann.euler_1d_py)": [[102, "clawpack.riemann.euler_1D_py.euler_hll_1D"]], "euler_hllc_1d() (in module clawpack.riemann.euler_1d_py)": [[102, "clawpack.riemann.euler_1D_py.euler_hllc_1D"]], "euler_roe_1d() (in module clawpack.riemann.euler_1d_py)": [[102, "clawpack.riemann.euler_1D_py.euler_roe_1D"]], "shallow_exact_1d() (in module clawpack.riemann.shallow_1d_py)": [[102, "clawpack.riemann.shallow_1D_py.shallow_exact_1D"]], "shallow_fwave_1d() (in module clawpack.riemann.shallow_1d_py)": [[102, "clawpack.riemann.shallow_1D_py.shallow_fwave_1d"]], "shallow_hll_1d() (in module clawpack.riemann.shallow_1d_py)": [[102, "clawpack.riemann.shallow_1D_py.shallow_hll_1D"]], "shallow_roe_1d() (in module clawpack.riemann.shallow_1d_py)": [[102, "clawpack.riemann.shallow_1D_py.shallow_roe_1D"]], "solution (class in clawpack.pyclaw.solution)": [[103, "clawpack.pyclaw.solution.Solution"]], "is_valid() (clawpack.pyclaw.solution.solution method)": [[103, "clawpack.pyclaw.solution.Solution.is_valid"]], "patch (clawpack.pyclaw.solution.solution property)": [[103, "clawpack.pyclaw.solution.Solution.patch"]], "plot() (clawpack.pyclaw.solution.solution method)": [[103, "clawpack.pyclaw.solution.Solution.plot"]], "read() (clawpack.pyclaw.solution.solution method)": [[103, "clawpack.pyclaw.solution.Solution.read"]], "set_all_states() (clawpack.pyclaw.solution.solution method)": [[103, "clawpack.pyclaw.solution.Solution.set_all_states"]], "start_frame (clawpack.pyclaw.solution.solution property)": [[103, "clawpack.pyclaw.solution.Solution.start_frame"]], "state (clawpack.pyclaw.solution.solution property)": [[103, "clawpack.pyclaw.solution.Solution.state"]], "write() (clawpack.pyclaw.solution.solution method)": [[103, "clawpack.pyclaw.solution.Solution.write"]], "clawsolver (class in clawpack.pyclaw.classic.solver)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver"]], "sharpclawsolver (class in clawpack.pyclaw.sharpclaw.solver)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver"]], "accept_reject_step() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.accept_reject_step"]], "aux_time_dep (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.aux_time_dep"]], "call_before_step_each_stage (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.call_before_step_each_stage"]], "cfl_desired (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.cfl_desired"]], "cfl_max (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.cfl_max"]], "char_decomp (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.char_decomp"]], "check_3rd_ord_cond() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.check_3rd_ord_cond"]], "dq() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.dq"]], "dq_src (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.dq_src"]], "dqdt() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.dqdt"]], "fwave (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.fwave"]], "fwave (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.fwave"]], "get_dt_new() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.get_dt_new"]], "kernel_language (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.kernel_language"]], "kernel_language (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.kernel_language"]], "lim_type (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.lim_type"]], "mthlim (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.mthlim"]], "num_ghost (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.num_ghost"]], "order (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.order"]], "setup() (clawpack.pyclaw.classic.solver.clawsolver method)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.setup"]], "setup() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.setup"]], "source_split (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.source_split"]], "step() (clawpack.pyclaw.classic.solver.clawsolver method)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.step"]], "step() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.step"]], "step_hyperbolic() (clawpack.pyclaw.classic.solver.clawsolver method)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.step_hyperbolic"]], "step_source (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.step_source"]], "tfluct (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.tfluct"]], "tfluct_solver (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.tfluct_solver"]], "time_integrator (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.time_integrator"]], "update_saved_values() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.update_saved_values"]], "verbosity (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.verbosity"]], "weno_order (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.weno_order"]], "f (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.F"]], "f (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.F"]], "state (class in clawpack.petclaw.state)": [[106, "clawpack.petclaw.state.State"]], "state (class in clawpack.pyclaw.state)": [[106, "clawpack.pyclaw.state.State"]], "aux (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.aux"]], "fset (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.fset"]], "gauge_data (clawpack.petclaw.state.state attribute)": [[106, "clawpack.petclaw.state.State.gauge_data"]], "gauge_data (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.gauge_data"]], "get_aux_global() (clawpack.petclaw.state.state method)": [[106, "clawpack.petclaw.state.State.get_aux_global"]], "get_aux_global() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.get_aux_global"]], "get_auxbc_from_aux() (clawpack.petclaw.state.state method)": [[106, "clawpack.petclaw.state.State.get_auxbc_from_aux"]], "get_auxbc_from_aux() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.get_auxbc_from_aux"]], "get_q_global() (clawpack.petclaw.state.state method)": [[106, "clawpack.petclaw.state.State.get_q_global"]], "get_q_global() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.get_q_global"]], "get_qbc_from_q() (clawpack.petclaw.state.state method)": [[106, "clawpack.petclaw.state.State.get_qbc_from_q"]], "get_qbc_from_q() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.get_qbc_from_q"]], "is_valid() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.is_valid"]], "keep_gauges (clawpack.petclaw.state.state attribute)": [[106, "clawpack.petclaw.state.State.keep_gauges"]], "keep_gauges (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.keep_gauges"]], "mf (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.mF"]], "mf (clawpack.pyclaw.state.state property)": [[106, "clawpack.pyclaw.state.State.mF"]], "mp (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.mp"]], "mp (clawpack.pyclaw.state.state property)": [[106, "clawpack.pyclaw.state.State.mp"]], "num_aux (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.num_aux"]], "num_aux (clawpack.pyclaw.state.state property)": [[106, "clawpack.pyclaw.state.State.num_aux"]], "num_eqn (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.num_eqn"]], "num_eqn (clawpack.pyclaw.state.state property)": [[106, "clawpack.pyclaw.state.State.num_eqn"]], "p (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.p"]], "p (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.p"]], "problem_data (clawpack.petclaw.state.state attribute)": [[106, "clawpack.petclaw.state.State.problem_data"]], "problem_data (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.problem_data"]], "q (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.q"]], "set_aux_from_auxbc() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.set_aux_from_auxbc"]], "set_cparam() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.set_cparam"]], "set_num_ghost() (clawpack.petclaw.state.state method)": [[106, "clawpack.petclaw.state.State.set_num_ghost"]], "set_num_ghost() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.set_num_ghost"]], "set_q_from_qbc() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.set_q_from_qbc"]], "t (clawpack.petclaw.state.state attribute)": [[106, "clawpack.petclaw.state.State.t"]], "t (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.t"]], "framecounter (class in clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.FrameCounter"]], "verifyerror": [[109, "clawpack.pyclaw.util.VerifyError"]], "add_parent_doc() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.add_parent_doc"]], "check_diff() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.check_diff"]], "clawpack.pyclaw.util": [[109, "module-clawpack.pyclaw.util"]], "compile_library() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.compile_library"]], "construct_function_handle() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.construct_function_handle"]], "convert_fort_double_to_float() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.convert_fort_double_to_float"]], "gen_variants() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.gen_variants"]], "get_counter() (clawpack.pyclaw.util.framecounter method)": [[109, "clawpack.pyclaw.util.FrameCounter.get_counter"]], "increment() (clawpack.pyclaw.util.framecounter method)": [[109, "clawpack.pyclaw.util.FrameCounter.increment"]], "read_data_line() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.read_data_line"]], "reset_counter() (clawpack.pyclaw.util.framecounter method)": [[109, "clawpack.pyclaw.util.FrameCounter.reset_counter"]], "run_app_from_main() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.run_app_from_main"]], "run_serialized() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.run_serialized"]], "set_counter() (clawpack.pyclaw.util.framecounter method)": [[109, "clawpack.pyclaw.util.FrameCounter.set_counter"]], "test_app() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.test_app"]], "nodataerror": [[158, "clawpack.geoclaw.surge.storm.NoDataError"]], "storm (class in clawpack.geoclaw.surge.storm)": [[158, "clawpack.geoclaw.surge.storm.Storm"]], "available_formats() (in module clawpack.geoclaw.surge.storm)": [[158, "clawpack.geoclaw.surge.storm.available_formats"]], "available_models() (in module clawpack.geoclaw.surge.storm)": [[158, "clawpack.geoclaw.surge.storm.available_models"]], "category() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.category"]], "clawpack.geoclaw.surge.storm": [[158, "module-clawpack.geoclaw.surge.storm"]], "fill_rad_w_other_source() (in module clawpack.geoclaw.surge.storm)": [[158, "clawpack.geoclaw.surge.storm.fill_rad_w_other_source"]], "make_multi_structure() (in module clawpack.geoclaw.surge.storm)": [[158, "clawpack.geoclaw.surge.storm.make_multi_structure"]], "read() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read"]], "read_atcf() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_atcf"]], "read_geoclaw() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_geoclaw"]], "read_hurdat() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_hurdat"]], "read_ibtracs() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_ibtracs"]], "read_imd() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_imd"]], "read_jma() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_jma"]], "read_tcvitals() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_tcvitals"]], "write() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write"]], "write_atcf() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_atcf"]], "write_geoclaw() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_geoclaw"]], "write_hurdat() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_hurdat"]], "write_imd() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_imd"]], "write_jma() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_jma"]], "write_tcvitals() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_tcvitals"]], "topography (class in clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.Topography"]], "x (clawpack.geoclaw.topotools.topography property)": [[164, "clawpack.geoclaw.topotools.Topography.X"], [164, "clawpack.geoclaw.topotools.Topography.x"]], "y (clawpack.geoclaw.topotools.topography property)": [[164, "clawpack.geoclaw.topotools.Topography.Y"], [164, "clawpack.geoclaw.topotools.Topography.y"]], "z (clawpack.geoclaw.topotools.topography property)": [[164, "clawpack.geoclaw.topotools.Topography.Z"], [164, "clawpack.geoclaw.topotools.Topography.z"]], "clawpack.geoclaw.topotools": [[164, "module-clawpack.geoclaw.topotools"]], "create_topo_func() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.create_topo_func"]], "crop() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.crop"]], "delta (clawpack.geoclaw.topotools.topography property)": [[164, "clawpack.geoclaw.topotools.Topography.delta"]], "determine_topo_type() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.determine_topo_type"]], "extent (clawpack.geoclaw.topotools.topography property)": [[164, "clawpack.geoclaw.topotools.Topography.extent"]], "fetch_topo_url() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.fetch_topo_url"]], "generate_2d_coordinates() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.generate_2d_coordinates"]], "generate_2d_topo() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.generate_2d_topo"]], "get_topo() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.get_topo"]], "in_poly() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.in_poly"]], "interp_unstructured() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.interp_unstructured"]], "make_shoreline_xy() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.make_shoreline_xy"]], "plot() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.plot"]], "read() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.read"]], "read_header() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.read_header"]], "read_netcdf() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.read_netcdf"]], "replace_no_data_values() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.replace_no_data_values"]], "replace_values() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.replace_values"]], "set_xyz() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.set_xyZ"]], "smooth_data() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.smooth_data"]], "swapheader() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.swapheader"]], "topo1writer() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.topo1writer"]], "topo2writer() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.topo2writer"]], "topo3writer() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.topo3writer"]], "write() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.write"]]}})
\ No newline at end of file
diff --git a/v5.10.x/.buildinfo b/v5.10.x/.buildinfo
index 0e0b62934..4ec94fc12 100644
--- a/v5.10.x/.buildinfo
+++ b/v5.10.x/.buildinfo
@@ -1,4 +1,4 @@
 # Sphinx build info version 1
 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: 7e4cdb6f732240116429aba5cda9a2d4
+config: 45368044918c8e987115991016a96479
 tags: 645f666f9bcd5a90fca523b33c5a78b7
diff --git a/v5.10.x/.doctrees/ClawPlotAxes.doctree b/v5.10.x/.doctrees/ClawPlotAxes.doctree
index 14c96ba71..22a59fea0 100644
Binary files a/v5.10.x/.doctrees/ClawPlotAxes.doctree and b/v5.10.x/.doctrees/ClawPlotAxes.doctree differ
diff --git a/v5.10.x/.doctrees/ClawPlotData.doctree b/v5.10.x/.doctrees/ClawPlotData.doctree
index e10de6a92..54a5ea8f2 100644
Binary files a/v5.10.x/.doctrees/ClawPlotData.doctree and b/v5.10.x/.doctrees/ClawPlotData.doctree differ
diff --git a/v5.10.x/.doctrees/ClawPlotFigure.doctree b/v5.10.x/.doctrees/ClawPlotFigure.doctree
index 05d45cf26..e96119c9a 100644
Binary files a/v5.10.x/.doctrees/ClawPlotFigure.doctree and b/v5.10.x/.doctrees/ClawPlotFigure.doctree differ
diff --git a/v5.10.x/.doctrees/ClawPlotItem.doctree b/v5.10.x/.doctrees/ClawPlotItem.doctree
index 935435302..eab85f042 100644
Binary files a/v5.10.x/.doctrees/ClawPlotItem.doctree and b/v5.10.x/.doctrees/ClawPlotItem.doctree differ
diff --git a/v5.10.x/.doctrees/about.doctree b/v5.10.x/.doctrees/about.doctree
index 6c726a265..493e7c5af 100644
Binary files a/v5.10.x/.doctrees/about.doctree and b/v5.10.x/.doctrees/about.doctree differ
diff --git a/v5.10.x/.doctrees/adjoint.doctree b/v5.10.x/.doctrees/adjoint.doctree
index 57265a185..2f6956552 100644
Binary files a/v5.10.x/.doctrees/adjoint.doctree and b/v5.10.x/.doctrees/adjoint.doctree differ
diff --git a/v5.10.x/.doctrees/amr_algorithm.doctree b/v5.10.x/.doctrees/amr_algorithm.doctree
index b3effa9da..8daa6b214 100644
Binary files a/v5.10.x/.doctrees/amr_algorithm.doctree and b/v5.10.x/.doctrees/amr_algorithm.doctree differ
diff --git a/v5.10.x/.doctrees/amrclaw.doctree b/v5.10.x/.doctrees/amrclaw.doctree
index 3708b85d2..d4e91e6ac 100644
Binary files a/v5.10.x/.doctrees/amrclaw.doctree and b/v5.10.x/.doctrees/amrclaw.doctree differ
diff --git a/v5.10.x/.doctrees/amrclaw1d.doctree b/v5.10.x/.doctrees/amrclaw1d.doctree
index 6bc3d34a4..4979d49e7 100644
Binary files a/v5.10.x/.doctrees/amrclaw1d.doctree and b/v5.10.x/.doctrees/amrclaw1d.doctree differ
diff --git a/v5.10.x/.doctrees/amrclaw_doxygen.doctree b/v5.10.x/.doctrees/amrclaw_doxygen.doctree
index 6dbb34827..9a6c27a00 100644
Binary files a/v5.10.x/.doctrees/amrclaw_doxygen.doctree and b/v5.10.x/.doctrees/amrclaw_doxygen.doctree differ
diff --git a/v5.10.x/.doctrees/amrclaw_flowcharts.doctree b/v5.10.x/.doctrees/amrclaw_flowcharts.doctree
index 912800b83..73b52e53f 100644
Binary files a/v5.10.x/.doctrees/amrclaw_flowcharts.doctree and b/v5.10.x/.doctrees/amrclaw_flowcharts.doctree differ
diff --git a/v5.10.x/.doctrees/application_documentation.doctree b/v5.10.x/.doctrees/application_documentation.doctree
index 20d65a8bf..54738a298 100644
Binary files a/v5.10.x/.doctrees/application_documentation.doctree and b/v5.10.x/.doctrees/application_documentation.doctree differ
diff --git a/v5.10.x/.doctrees/apps.doctree b/v5.10.x/.doctrees/apps.doctree
index c6740df91..98813b4a3 100644
Binary files a/v5.10.x/.doctrees/apps.doctree and b/v5.10.x/.doctrees/apps.doctree differ
diff --git a/v5.10.x/.doctrees/aws.doctree b/v5.10.x/.doctrees/aws.doctree
index b3f578d29..0982c38b8 100644
Binary files a/v5.10.x/.doctrees/aws.doctree and b/v5.10.x/.doctrees/aws.doctree differ
diff --git a/v5.10.x/.doctrees/b4run.doctree b/v5.10.x/.doctrees/b4run.doctree
index 033555a05..7cdc905e6 100644
Binary files a/v5.10.x/.doctrees/b4run.doctree and b/v5.10.x/.doctrees/b4run.doctree differ
diff --git a/v5.10.x/.doctrees/b4step_defaults.doctree b/v5.10.x/.doctrees/b4step_defaults.doctree
index eea76cf01..c6a95b421 100644
Binary files a/v5.10.x/.doctrees/b4step_defaults.doctree and b/v5.10.x/.doctrees/b4step_defaults.doctree differ
diff --git a/v5.10.x/.doctrees/bc.doctree b/v5.10.x/.doctrees/bc.doctree
index 47d8ce497..13b36f57a 100644
Binary files a/v5.10.x/.doctrees/bc.doctree and b/v5.10.x/.doctrees/bc.doctree differ
diff --git a/v5.10.x/.doctrees/biblio.doctree b/v5.10.x/.doctrees/biblio.doctree
index b9ad59b0f..e6ec39568 100644
Binary files a/v5.10.x/.doctrees/biblio.doctree and b/v5.10.x/.doctrees/biblio.doctree differ
diff --git a/v5.10.x/.doctrees/bouss1d.doctree b/v5.10.x/.doctrees/bouss1d.doctree
index b6ce3cb17..51bfc6268 100644
Binary files a/v5.10.x/.doctrees/bouss1d.doctree and b/v5.10.x/.doctrees/bouss1d.doctree differ
diff --git a/v5.10.x/.doctrees/bouss2d.doctree b/v5.10.x/.doctrees/bouss2d.doctree
index 3857d7f11..05bf5be83 100644
Binary files a/v5.10.x/.doctrees/bouss2d.doctree and b/v5.10.x/.doctrees/bouss2d.doctree differ
diff --git a/v5.10.x/.doctrees/changes_to_master.doctree b/v5.10.x/.doctrees/changes_to_master.doctree
index 059c08cb0..fed2b336b 100644
Binary files a/v5.10.x/.doctrees/changes_to_master.doctree and b/v5.10.x/.doctrees/changes_to_master.doctree differ
diff --git a/v5.10.x/.doctrees/claw43to46.doctree b/v5.10.x/.doctrees/claw43to46.doctree
index 6ea2b0471..4601da689 100644
Binary files a/v5.10.x/.doctrees/claw43to46.doctree and b/v5.10.x/.doctrees/claw43to46.doctree differ
diff --git a/v5.10.x/.doctrees/claw46to50.doctree b/v5.10.x/.doctrees/claw46to50.doctree
index 56ccc124e..bb557118f 100644
Binary files a/v5.10.x/.doctrees/claw46to50.doctree and b/v5.10.x/.doctrees/claw46to50.doctree differ
diff --git a/v5.10.x/.doctrees/claw4x.doctree b/v5.10.x/.doctrees/claw4x.doctree
index 1e1c152cf..5605945fa 100644
Binary files a/v5.10.x/.doctrees/claw4x.doctree and b/v5.10.x/.doctrees/claw4x.doctree differ
diff --git a/v5.10.x/.doctrees/clawpack5.doctree b/v5.10.x/.doctrees/clawpack5.doctree
index 946905366..c1c9daf1d 100644
Binary files a/v5.10.x/.doctrees/clawpack5.doctree and b/v5.10.x/.doctrees/clawpack5.doctree differ
diff --git a/v5.10.x/.doctrees/clawpack_components.doctree b/v5.10.x/.doctrees/clawpack_components.doctree
index c2a4f6003..47589d35b 100644
Binary files a/v5.10.x/.doctrees/clawpack_components.doctree and b/v5.10.x/.doctrees/clawpack_components.doctree differ
diff --git a/v5.10.x/.doctrees/community.doctree b/v5.10.x/.doctrees/community.doctree
index fe536186b..24b74349a 100644
Binary files a/v5.10.x/.doctrees/community.doctree and b/v5.10.x/.doctrees/community.doctree differ
diff --git a/v5.10.x/.doctrees/contents.doctree b/v5.10.x/.doctrees/contents.doctree
index 620d4cd7b..ac4d4fe7e 100644
Binary files a/v5.10.x/.doctrees/contents.doctree and b/v5.10.x/.doctrees/contents.doctree differ
diff --git a/v5.10.x/.doctrees/contribute_apps.doctree b/v5.10.x/.doctrees/contribute_apps.doctree
index b204682a3..bae098ac4 100644
Binary files a/v5.10.x/.doctrees/contribute_apps.doctree and b/v5.10.x/.doctrees/contribute_apps.doctree differ
diff --git a/v5.10.x/.doctrees/current_data.doctree b/v5.10.x/.doctrees/current_data.doctree
index 486f9a798..3201304b0 100644
Binary files a/v5.10.x/.doctrees/current_data.doctree and b/v5.10.x/.doctrees/current_data.doctree differ
diff --git a/v5.10.x/.doctrees/developers.doctree b/v5.10.x/.doctrees/developers.doctree
index 759bc0ef0..3497056d4 100644
Binary files a/v5.10.x/.doctrees/developers.doctree and b/v5.10.x/.doctrees/developers.doctree differ
diff --git a/v5.10.x/.doctrees/docker_image.doctree b/v5.10.x/.doctrees/docker_image.doctree
index f66311f52..32a3b82bf 100644
Binary files a/v5.10.x/.doctrees/docker_image.doctree and b/v5.10.x/.doctrees/docker_image.doctree differ
diff --git a/v5.10.x/.doctrees/dtopotools_module.doctree b/v5.10.x/.doctrees/dtopotools_module.doctree
index c5d4161f1..42a997764 100644
Binary files a/v5.10.x/.doctrees/dtopotools_module.doctree and b/v5.10.x/.doctrees/dtopotools_module.doctree differ
diff --git a/v5.10.x/.doctrees/environment.pickle b/v5.10.x/.doctrees/environment.pickle
index d250d1b58..f0cca6739 100644
Binary files a/v5.10.x/.doctrees/environment.pickle and b/v5.10.x/.doctrees/environment.pickle differ
diff --git a/v5.10.x/.doctrees/f77_vs_f90.doctree b/v5.10.x/.doctrees/f77_vs_f90.doctree
index 613ae2c11..1bd9a552e 100644
Binary files a/v5.10.x/.doctrees/f77_vs_f90.doctree and b/v5.10.x/.doctrees/f77_vs_f90.doctree differ
diff --git a/v5.10.x/.doctrees/fgmax.doctree b/v5.10.x/.doctrees/fgmax.doctree
index c4121b6d0..3fc067b76 100644
Binary files a/v5.10.x/.doctrees/fgmax.doctree and b/v5.10.x/.doctrees/fgmax.doctree differ
diff --git a/v5.10.x/.doctrees/fgmax_tools_module.doctree b/v5.10.x/.doctrees/fgmax_tools_module.doctree
index ee369fd20..abc811f3c 100644
Binary files a/v5.10.x/.doctrees/fgmax_tools_module.doctree and b/v5.10.x/.doctrees/fgmax_tools_module.doctree differ
diff --git a/v5.10.x/.doctrees/fgout.doctree b/v5.10.x/.doctrees/fgout.doctree
index 107da3be4..923f5947c 100644
Binary files a/v5.10.x/.doctrees/fgout.doctree and b/v5.10.x/.doctrees/fgout.doctree differ
diff --git a/v5.10.x/.doctrees/fgout_tools_module.doctree b/v5.10.x/.doctrees/fgout_tools_module.doctree
index 98201f721..ac406523a 100644
Binary files a/v5.10.x/.doctrees/fgout_tools_module.doctree and b/v5.10.x/.doctrees/fgout_tools_module.doctree differ
diff --git a/v5.10.x/.doctrees/first_run.doctree b/v5.10.x/.doctrees/first_run.doctree
index a030237c3..db61c28ff 100644
Binary files a/v5.10.x/.doctrees/first_run.doctree and b/v5.10.x/.doctrees/first_run.doctree differ
diff --git a/v5.10.x/.doctrees/first_run_fortran.doctree b/v5.10.x/.doctrees/first_run_fortran.doctree
index 6bc497691..04907a15f 100644
Binary files a/v5.10.x/.doctrees/first_run_fortran.doctree and b/v5.10.x/.doctrees/first_run_fortran.doctree differ
diff --git a/v5.10.x/.doctrees/first_run_pyclaw.doctree b/v5.10.x/.doctrees/first_run_pyclaw.doctree
index 3d62bff09..4f33b29ba 100644
Binary files a/v5.10.x/.doctrees/first_run_pyclaw.doctree and b/v5.10.x/.doctrees/first_run_pyclaw.doctree differ
diff --git a/v5.10.x/.doctrees/flagregions.doctree b/v5.10.x/.doctrees/flagregions.doctree
index 12063c7cb..087ee9655 100644
Binary files a/v5.10.x/.doctrees/flagregions.doctree and b/v5.10.x/.doctrees/flagregions.doctree differ
diff --git a/v5.10.x/.doctrees/force_dry.doctree b/v5.10.x/.doctrees/force_dry.doctree
index 1db50817d..845530e1c 100644
Binary files a/v5.10.x/.doctrees/force_dry.doctree and b/v5.10.x/.doctrees/force_dry.doctree differ
diff --git a/v5.10.x/.doctrees/fortran.doctree b/v5.10.x/.doctrees/fortran.doctree
index 3ebeb4b93..0d28c997b 100644
Binary files a/v5.10.x/.doctrees/fortran.doctree and b/v5.10.x/.doctrees/fortran.doctree differ
diff --git a/v5.10.x/.doctrees/fortran_compilers.doctree b/v5.10.x/.doctrees/fortran_compilers.doctree
index ee1a85c66..ed0d4b348 100644
Binary files a/v5.10.x/.doctrees/fortran_compilers.doctree and b/v5.10.x/.doctrees/fortran_compilers.doctree differ
diff --git a/v5.10.x/.doctrees/fvmbook.doctree b/v5.10.x/.doctrees/fvmbook.doctree
index 06ad6953e..acd2ab185 100644
Binary files a/v5.10.x/.doctrees/fvmbook.doctree and b/v5.10.x/.doctrees/fvmbook.doctree differ
diff --git a/v5.10.x/.doctrees/galleries.doctree b/v5.10.x/.doctrees/galleries.doctree
index 5eeefe6a0..03593ac1f 100644
Binary files a/v5.10.x/.doctrees/galleries.doctree and b/v5.10.x/.doctrees/galleries.doctree differ
diff --git a/v5.10.x/.doctrees/gauges.doctree b/v5.10.x/.doctrees/gauges.doctree
index e860abc2a..ac49790bc 100644
Binary files a/v5.10.x/.doctrees/gauges.doctree and b/v5.10.x/.doctrees/gauges.doctree differ
diff --git a/v5.10.x/.doctrees/geoclaw.doctree b/v5.10.x/.doctrees/geoclaw.doctree
index 47b4a27c1..4e152b7c3 100644
Binary files a/v5.10.x/.doctrees/geoclaw.doctree and b/v5.10.x/.doctrees/geoclaw.doctree differ
diff --git a/v5.10.x/.doctrees/geoclaw1d.doctree b/v5.10.x/.doctrees/geoclaw1d.doctree
index 4c1b68b73..f0a8f2cc9 100644
Binary files a/v5.10.x/.doctrees/geoclaw1d.doctree and b/v5.10.x/.doctrees/geoclaw1d.doctree differ
diff --git a/v5.10.x/.doctrees/geoclaw_started.doctree b/v5.10.x/.doctrees/geoclaw_started.doctree
index 1d392a377..294515366 100644
Binary files a/v5.10.x/.doctrees/geoclaw_started.doctree and b/v5.10.x/.doctrees/geoclaw_started.doctree differ
diff --git a/v5.10.x/.doctrees/geoclaw_util_module.doctree b/v5.10.x/.doctrees/geoclaw_util_module.doctree
index 98fea5d31..8448d4b7a 100644
Binary files a/v5.10.x/.doctrees/geoclaw_util_module.doctree and b/v5.10.x/.doctrees/geoclaw_util_module.doctree differ
diff --git a/v5.10.x/.doctrees/geohints.doctree b/v5.10.x/.doctrees/geohints.doctree
index ee347c55c..e51ab5b20 100644
Binary files a/v5.10.x/.doctrees/geohints.doctree and b/v5.10.x/.doctrees/geohints.doctree differ
diff --git a/v5.10.x/.doctrees/geoplot.doctree b/v5.10.x/.doctrees/geoplot.doctree
index d8b4a4407..66b5f7f98 100644
Binary files a/v5.10.x/.doctrees/geoplot.doctree and b/v5.10.x/.doctrees/geoplot.doctree differ
diff --git a/v5.10.x/.doctrees/git_versions.doctree b/v5.10.x/.doctrees/git_versions.doctree
index 5b0117bb9..5655a7106 100644
Binary files a/v5.10.x/.doctrees/git_versions.doctree and b/v5.10.x/.doctrees/git_versions.doctree differ
diff --git a/v5.10.x/.doctrees/googleearth_plotting.doctree b/v5.10.x/.doctrees/googleearth_plotting.doctree
index 87b4c6ad2..63e47e048 100644
Binary files a/v5.10.x/.doctrees/googleearth_plotting.doctree and b/v5.10.x/.doctrees/googleearth_plotting.doctree differ
diff --git a/v5.10.x/.doctrees/gpu.doctree b/v5.10.x/.doctrees/gpu.doctree
index e0f100b48..4ad119087 100644
Binary files a/v5.10.x/.doctrees/gpu.doctree and b/v5.10.x/.doctrees/gpu.doctree differ
diff --git a/v5.10.x/.doctrees/grid_registration.doctree b/v5.10.x/.doctrees/grid_registration.doctree
index e084433f3..df872a041 100644
Binary files a/v5.10.x/.doctrees/grid_registration.doctree and b/v5.10.x/.doctrees/grid_registration.doctree differ
diff --git a/v5.10.x/.doctrees/howto_doc.doctree b/v5.10.x/.doctrees/howto_doc.doctree
index 1bdce1459..f56dc4e3c 100644
Binary files a/v5.10.x/.doctrees/howto_doc.doctree and b/v5.10.x/.doctrees/howto_doc.doctree differ
diff --git a/v5.10.x/.doctrees/howto_release.doctree b/v5.10.x/.doctrees/howto_release.doctree
index 05659ec3d..109053927 100644
Binary files a/v5.10.x/.doctrees/howto_release.doctree and b/v5.10.x/.doctrees/howto_release.doctree differ
diff --git a/v5.10.x/.doctrees/installing.doctree b/v5.10.x/.doctrees/installing.doctree
index bb39be9cf..31eb6859a 100644
Binary files a/v5.10.x/.doctrees/installing.doctree and b/v5.10.x/.doctrees/installing.doctree differ
diff --git a/v5.10.x/.doctrees/installing_fortcodes.doctree b/v5.10.x/.doctrees/installing_fortcodes.doctree
index 563d5d728..4d572a2a3 100644
Binary files a/v5.10.x/.doctrees/installing_fortcodes.doctree and b/v5.10.x/.doctrees/installing_fortcodes.doctree differ
diff --git a/v5.10.x/.doctrees/installing_pip.doctree b/v5.10.x/.doctrees/installing_pip.doctree
index 77f87d737..71791b714 100644
Binary files a/v5.10.x/.doctrees/installing_pip.doctree and b/v5.10.x/.doctrees/installing_pip.doctree differ
diff --git a/v5.10.x/.doctrees/kmltools_module.doctree b/v5.10.x/.doctrees/kmltools_module.doctree
index aedd9fbfe..975d24dc3 100644
Binary files a/v5.10.x/.doctrees/kmltools_module.doctree and b/v5.10.x/.doctrees/kmltools_module.doctree differ
diff --git a/v5.10.x/.doctrees/lagrangian_gauges.doctree b/v5.10.x/.doctrees/lagrangian_gauges.doctree
index 57d605300..9baf422f2 100644
Binary files a/v5.10.x/.doctrees/lagrangian_gauges.doctree and b/v5.10.x/.doctrees/lagrangian_gauges.doctree differ
diff --git a/v5.10.x/.doctrees/license.doctree b/v5.10.x/.doctrees/license.doctree
index ba595400e..f6a0545d9 100644
Binary files a/v5.10.x/.doctrees/license.doctree and b/v5.10.x/.doctrees/license.doctree differ
diff --git a/v5.10.x/.doctrees/makefiles.doctree b/v5.10.x/.doctrees/makefiles.doctree
index 695782cf2..21e042afd 100644
Binary files a/v5.10.x/.doctrees/makefiles.doctree and b/v5.10.x/.doctrees/makefiles.doctree differ
diff --git a/v5.10.x/.doctrees/makefiles_library.doctree b/v5.10.x/.doctrees/makefiles_library.doctree
index 45d6fce6d..5ecca4779 100644
Binary files a/v5.10.x/.doctrees/makefiles_library.doctree and b/v5.10.x/.doctrees/makefiles_library.doctree differ
diff --git a/v5.10.x/.doctrees/manning.doctree b/v5.10.x/.doctrees/manning.doctree
index 9c364d1a0..cb8a30873 100644
Binary files a/v5.10.x/.doctrees/manning.doctree and b/v5.10.x/.doctrees/manning.doctree differ
diff --git a/v5.10.x/.doctrees/mapc2p.doctree b/v5.10.x/.doctrees/mapc2p.doctree
index 6fe886028..9ebcb380e 100644
Binary files a/v5.10.x/.doctrees/mapc2p.doctree and b/v5.10.x/.doctrees/mapc2p.doctree differ
diff --git a/v5.10.x/.doctrees/marching_front.doctree b/v5.10.x/.doctrees/marching_front.doctree
index 12485b06e..a6e604bbe 100644
Binary files a/v5.10.x/.doctrees/marching_front.doctree and b/v5.10.x/.doctrees/marching_front.doctree differ
diff --git a/v5.10.x/.doctrees/matlab_plotting.doctree b/v5.10.x/.doctrees/matlab_plotting.doctree
index cb68bbb73..3a0bcd351 100644
Binary files a/v5.10.x/.doctrees/matlab_plotting.doctree and b/v5.10.x/.doctrees/matlab_plotting.doctree differ
diff --git a/v5.10.x/.doctrees/nearshore_interp.doctree b/v5.10.x/.doctrees/nearshore_interp.doctree
index 4f5d580f9..82d9db988 100644
Binary files a/v5.10.x/.doctrees/nearshore_interp.doctree and b/v5.10.x/.doctrees/nearshore_interp.doctree differ
diff --git a/v5.10.x/.doctrees/netcdf.doctree b/v5.10.x/.doctrees/netcdf.doctree
index bea5b08c5..3e6bdbb4e 100644
Binary files a/v5.10.x/.doctrees/netcdf.doctree and b/v5.10.x/.doctrees/netcdf.doctree differ
diff --git a/v5.10.x/.doctrees/newapp.doctree b/v5.10.x/.doctrees/newapp.doctree
index dc53ec8c9..88da4b02b 100644
Binary files a/v5.10.x/.doctrees/newapp.doctree and b/v5.10.x/.doctrees/newapp.doctree differ
diff --git a/v5.10.x/.doctrees/okada.doctree b/v5.10.x/.doctrees/okada.doctree
index 779259cee..d57645336 100644
Binary files a/v5.10.x/.doctrees/okada.doctree and b/v5.10.x/.doctrees/okada.doctree differ
diff --git a/v5.10.x/.doctrees/openmp.doctree b/v5.10.x/.doctrees/openmp.doctree
index 3359b3dc5..eafa083c4 100644
Binary files a/v5.10.x/.doctrees/openmp.doctree and b/v5.10.x/.doctrees/openmp.doctree differ
diff --git a/v5.10.x/.doctrees/output_styles.doctree b/v5.10.x/.doctrees/output_styles.doctree
index 2f78e3fdd..a1cf27a7a 100644
Binary files a/v5.10.x/.doctrees/output_styles.doctree and b/v5.10.x/.doctrees/output_styles.doctree differ
diff --git a/v5.10.x/.doctrees/packages.doctree b/v5.10.x/.doctrees/packages.doctree
index a3fb763f3..41a3c9175 100644
Binary files a/v5.10.x/.doctrees/packages.doctree and b/v5.10.x/.doctrees/packages.doctree differ
diff --git a/v5.10.x/.doctrees/photos.doctree b/v5.10.x/.doctrees/photos.doctree
index 99db138da..cd63f824e 100644
Binary files a/v5.10.x/.doctrees/photos.doctree and b/v5.10.x/.doctrees/photos.doctree differ
diff --git a/v5.10.x/.doctrees/plotexamples.doctree b/v5.10.x/.doctrees/plotexamples.doctree
index d42913570..0976b75ec 100644
Binary files a/v5.10.x/.doctrees/plotexamples.doctree and b/v5.10.x/.doctrees/plotexamples.doctree differ
diff --git a/v5.10.x/.doctrees/plotting.doctree b/v5.10.x/.doctrees/plotting.doctree
index 6ead3b372..f638aca53 100644
Binary files a/v5.10.x/.doctrees/plotting.doctree and b/v5.10.x/.doctrees/plotting.doctree differ
diff --git a/v5.10.x/.doctrees/plotting_faq.doctree b/v5.10.x/.doctrees/plotting_faq.doctree
index 46968b1f0..4a92f1500 100644
Binary files a/v5.10.x/.doctrees/plotting_faq.doctree and b/v5.10.x/.doctrees/plotting_faq.doctree differ
diff --git a/v5.10.x/.doctrees/plotting_geoclaw.doctree b/v5.10.x/.doctrees/plotting_geoclaw.doctree
index 6fa118567..ee76b2552 100644
Binary files a/v5.10.x/.doctrees/plotting_geoclaw.doctree and b/v5.10.x/.doctrees/plotting_geoclaw.doctree differ
diff --git a/v5.10.x/.doctrees/plotting_python.doctree b/v5.10.x/.doctrees/plotting_python.doctree
index 49c0b7eeb..22cb04053 100644
Binary files a/v5.10.x/.doctrees/plotting_python.doctree and b/v5.10.x/.doctrees/plotting_python.doctree differ
diff --git a/v5.10.x/.doctrees/prereqs.doctree b/v5.10.x/.doctrees/prereqs.doctree
index c5bb6efce..2ab95bc8c 100644
Binary files a/v5.10.x/.doctrees/prereqs.doctree and b/v5.10.x/.doctrees/prereqs.doctree differ
diff --git a/v5.10.x/.doctrees/pyclaw/about.doctree b/v5.10.x/.doctrees/pyclaw/about.doctree
index 3bb2b3726..67f1f2f7c 100644
Binary files a/v5.10.x/.doctrees/pyclaw/about.doctree and b/v5.10.x/.doctrees/pyclaw/about.doctree differ
diff --git a/v5.10.x/.doctrees/pyclaw/basics.doctree b/v5.10.x/.doctrees/pyclaw/basics.doctree
index 8ce225a49..dda1a0035 100644
Binary files a/v5.10.x/.doctrees/pyclaw/basics.doctree and b/v5.10.x/.doctrees/pyclaw/basics.doctree differ
diff --git a/v5.10.x/.doctrees/pyclaw/classes.doctree b/v5.10.x/.doctrees/pyclaw/classes.doctree
index eb7552c57..ab0c83e8f 100644
Binary files a/v5.10.x/.doctrees/pyclaw/classes.doctree and b/v5.10.x/.doctrees/pyclaw/classes.doctree differ
diff --git a/v5.10.x/.doctrees/pyclaw/clawpack_and_pyclaw.doctree b/v5.10.x/.doctrees/pyclaw/clawpack_and_pyclaw.doctree
index dfead0487..a0897903f 100644
Binary files a/v5.10.x/.doctrees/pyclaw/clawpack_and_pyclaw.doctree and b/v5.10.x/.doctrees/pyclaw/clawpack_and_pyclaw.doctree differ
diff --git a/v5.10.x/.doctrees/pyclaw/cloud.doctree b/v5.10.x/.doctrees/pyclaw/cloud.doctree
index 83ed53beb..b2ef8dec4 100644
Binary files a/v5.10.x/.doctrees/pyclaw/cloud.doctree and b/v5.10.x/.doctrees/pyclaw/cloud.doctree differ
diff --git a/v5.10.x/.doctrees/pyclaw/controller.doctree b/v5.10.x/.doctrees/pyclaw/controller.doctree
index b424a64e9..9d7b23fe1 100644
Binary files a/v5.10.x/.doctrees/pyclaw/controller.doctree and b/v5.10.x/.doctrees/pyclaw/controller.doctree differ
diff --git a/v5.10.x/.doctrees/pyclaw/evolve/limiters.doctree b/v5.10.x/.doctrees/pyclaw/evolve/limiters.doctree
index 3bc00de65..8ae462501 100644
Binary files a/v5.10.x/.doctrees/pyclaw/evolve/limiters.doctree and b/v5.10.x/.doctrees/pyclaw/evolve/limiters.doctree differ
diff --git a/v5.10.x/.doctrees/pyclaw/examples.doctree b/v5.10.x/.doctrees/pyclaw/examples.doctree
index 468d5d520..9e10e7421 100644
Binary files a/v5.10.x/.doctrees/pyclaw/examples.doctree and b/v5.10.x/.doctrees/pyclaw/examples.doctree differ
diff --git a/v5.10.x/.doctrees/pyclaw/geometry.doctree b/v5.10.x/.doctrees/pyclaw/geometry.doctree
index 4a7c6bc4e..005f3436c 100644
Binary files a/v5.10.x/.doctrees/pyclaw/geometry.doctree and b/v5.10.x/.doctrees/pyclaw/geometry.doctree differ
diff --git a/v5.10.x/.doctrees/pyclaw/going_further.doctree b/v5.10.x/.doctrees/pyclaw/going_further.doctree
index 0bf701669..8994a359a 100644
Binary files a/v5.10.x/.doctrees/pyclaw/going_further.doctree and b/v5.10.x/.doctrees/pyclaw/going_further.doctree differ
diff --git a/v5.10.x/.doctrees/pyclaw/index.doctree b/v5.10.x/.doctrees/pyclaw/index.doctree
index bc8da6b34..4dee5117e 100644
Binary files a/v5.10.x/.doctrees/pyclaw/index.doctree and b/v5.10.x/.doctrees/pyclaw/index.doctree differ
diff --git a/v5.10.x/.doctrees/pyclaw/io.doctree b/v5.10.x/.doctrees/pyclaw/io.doctree
index 2d1a2142e..3d77293bf 100644
Binary files a/v5.10.x/.doctrees/pyclaw/io.doctree and b/v5.10.x/.doctrees/pyclaw/io.doctree differ
diff --git a/v5.10.x/.doctrees/pyclaw/output.doctree b/v5.10.x/.doctrees/pyclaw/output.doctree
index 9a91ed8ec..c964c9359 100644
Binary files a/v5.10.x/.doctrees/pyclaw/output.doctree and b/v5.10.x/.doctrees/pyclaw/output.doctree differ
diff --git a/v5.10.x/.doctrees/pyclaw/parallel.doctree b/v5.10.x/.doctrees/pyclaw/parallel.doctree
index d30602225..0aeffb613 100644
Binary files a/v5.10.x/.doctrees/pyclaw/parallel.doctree and b/v5.10.x/.doctrees/pyclaw/parallel.doctree differ
diff --git a/v5.10.x/.doctrees/pyclaw/plotting.doctree b/v5.10.x/.doctrees/pyclaw/plotting.doctree
index 03a428d92..f1b24d915 100644
Binary files a/v5.10.x/.doctrees/pyclaw/plotting.doctree and b/v5.10.x/.doctrees/pyclaw/plotting.doctree differ
diff --git a/v5.10.x/.doctrees/pyclaw/problem.doctree b/v5.10.x/.doctrees/pyclaw/problem.doctree
index 3ea29f09f..e881b25fc 100644
Binary files a/v5.10.x/.doctrees/pyclaw/problem.doctree and b/v5.10.x/.doctrees/pyclaw/problem.doctree differ
diff --git a/v5.10.x/.doctrees/pyclaw/rp.doctree b/v5.10.x/.doctrees/pyclaw/rp.doctree
index 904d95b06..2b5933ac9 100644
Binary files a/v5.10.x/.doctrees/pyclaw/rp.doctree and b/v5.10.x/.doctrees/pyclaw/rp.doctree differ
diff --git a/v5.10.x/.doctrees/pyclaw/solution.doctree b/v5.10.x/.doctrees/pyclaw/solution.doctree
index 6171ba6a2..b5dadc5d2 100644
Binary files a/v5.10.x/.doctrees/pyclaw/solution.doctree and b/v5.10.x/.doctrees/pyclaw/solution.doctree differ
diff --git a/v5.10.x/.doctrees/pyclaw/solvers.doctree b/v5.10.x/.doctrees/pyclaw/solvers.doctree
index 34bbcd083..be11bfdeb 100644
Binary files a/v5.10.x/.doctrees/pyclaw/solvers.doctree and b/v5.10.x/.doctrees/pyclaw/solvers.doctree differ
diff --git a/v5.10.x/.doctrees/pyclaw/started.doctree b/v5.10.x/.doctrees/pyclaw/started.doctree
index 504408f70..84e2c2b5f 100644
Binary files a/v5.10.x/.doctrees/pyclaw/started.doctree and b/v5.10.x/.doctrees/pyclaw/started.doctree differ
diff --git a/v5.10.x/.doctrees/pyclaw/state.doctree b/v5.10.x/.doctrees/pyclaw/state.doctree
index 112873070..70e79eda3 100644
Binary files a/v5.10.x/.doctrees/pyclaw/state.doctree and b/v5.10.x/.doctrees/pyclaw/state.doctree differ
diff --git a/v5.10.x/.doctrees/pyclaw/troubleshooting.doctree b/v5.10.x/.doctrees/pyclaw/troubleshooting.doctree
index 90a64de36..02b9b63e3 100644
Binary files a/v5.10.x/.doctrees/pyclaw/troubleshooting.doctree and b/v5.10.x/.doctrees/pyclaw/troubleshooting.doctree differ
diff --git a/v5.10.x/.doctrees/pyclaw/tutorial.doctree b/v5.10.x/.doctrees/pyclaw/tutorial.doctree
index 9ffb8f0df..5893117bd 100644
Binary files a/v5.10.x/.doctrees/pyclaw/tutorial.doctree and b/v5.10.x/.doctrees/pyclaw/tutorial.doctree differ
diff --git a/v5.10.x/.doctrees/pyclaw/util.doctree b/v5.10.x/.doctrees/pyclaw/util.doctree
index 811e6a590..8534608a4 100644
Binary files a/v5.10.x/.doctrees/pyclaw/util.doctree and b/v5.10.x/.doctrees/pyclaw/util.doctree differ
diff --git a/v5.10.x/.doctrees/python.doctree b/v5.10.x/.doctrees/python.doctree
index d3cd0061e..2266c0ace 100644
Binary files a/v5.10.x/.doctrees/python.doctree and b/v5.10.x/.doctrees/python.doctree differ
diff --git a/v5.10.x/.doctrees/python_path.doctree b/v5.10.x/.doctrees/python_path.doctree
index d96626d92..229604c93 100644
Binary files a/v5.10.x/.doctrees/python_path.doctree and b/v5.10.x/.doctrees/python_path.doctree differ
diff --git a/v5.10.x/.doctrees/qinit_defaults.doctree b/v5.10.x/.doctrees/qinit_defaults.doctree
index edaee070b..bace9ceaf 100644
Binary files a/v5.10.x/.doctrees/qinit_defaults.doctree and b/v5.10.x/.doctrees/qinit_defaults.doctree differ
diff --git a/v5.10.x/.doctrees/quick_surge.doctree b/v5.10.x/.doctrees/quick_surge.doctree
index 487de094c..d0f8b8f64 100644
Binary files a/v5.10.x/.doctrees/quick_surge.doctree and b/v5.10.x/.doctrees/quick_surge.doctree differ
diff --git a/v5.10.x/.doctrees/quick_tsunami.doctree b/v5.10.x/.doctrees/quick_tsunami.doctree
index bea8341bd..4e6a1619e 100644
Binary files a/v5.10.x/.doctrees/quick_tsunami.doctree and b/v5.10.x/.doctrees/quick_tsunami.doctree differ
diff --git a/v5.10.x/.doctrees/refinement.doctree b/v5.10.x/.doctrees/refinement.doctree
index 05f11d507..c9ec32878 100644
Binary files a/v5.10.x/.doctrees/refinement.doctree and b/v5.10.x/.doctrees/refinement.doctree differ
diff --git a/v5.10.x/.doctrees/regression.doctree b/v5.10.x/.doctrees/regression.doctree
index 7ffd1476a..bff623e36 100644
Binary files a/v5.10.x/.doctrees/regression.doctree and b/v5.10.x/.doctrees/regression.doctree differ
diff --git a/v5.10.x/.doctrees/release_5_0_0.doctree b/v5.10.x/.doctrees/release_5_0_0.doctree
index 2cc7259a0..c430037a5 100644
Binary files a/v5.10.x/.doctrees/release_5_0_0.doctree and b/v5.10.x/.doctrees/release_5_0_0.doctree differ
diff --git a/v5.10.x/.doctrees/release_5_10_0.doctree b/v5.10.x/.doctrees/release_5_10_0.doctree
index 1f343424c..a7344ac29 100644
Binary files a/v5.10.x/.doctrees/release_5_10_0.doctree and b/v5.10.x/.doctrees/release_5_10_0.doctree differ
diff --git a/v5.10.x/.doctrees/release_5_1_0.doctree b/v5.10.x/.doctrees/release_5_1_0.doctree
index be2798d0e..b17cd0cd3 100644
Binary files a/v5.10.x/.doctrees/release_5_1_0.doctree and b/v5.10.x/.doctrees/release_5_1_0.doctree differ
diff --git a/v5.10.x/.doctrees/release_5_2_0.doctree b/v5.10.x/.doctrees/release_5_2_0.doctree
index 844bb38da..4900c1c39 100644
Binary files a/v5.10.x/.doctrees/release_5_2_0.doctree and b/v5.10.x/.doctrees/release_5_2_0.doctree differ
diff --git a/v5.10.x/.doctrees/release_5_2_1.doctree b/v5.10.x/.doctrees/release_5_2_1.doctree
index dc9d870df..3ebabb76a 100644
Binary files a/v5.10.x/.doctrees/release_5_2_1.doctree and b/v5.10.x/.doctrees/release_5_2_1.doctree differ
diff --git a/v5.10.x/.doctrees/release_5_2_2.doctree b/v5.10.x/.doctrees/release_5_2_2.doctree
index c1a2d4c1e..a37dc9d73 100644
Binary files a/v5.10.x/.doctrees/release_5_2_2.doctree and b/v5.10.x/.doctrees/release_5_2_2.doctree differ
diff --git a/v5.10.x/.doctrees/release_5_3_0.doctree b/v5.10.x/.doctrees/release_5_3_0.doctree
index 0ee21511a..7613f55ee 100644
Binary files a/v5.10.x/.doctrees/release_5_3_0.doctree and b/v5.10.x/.doctrees/release_5_3_0.doctree differ
diff --git a/v5.10.x/.doctrees/release_5_3_1.doctree b/v5.10.x/.doctrees/release_5_3_1.doctree
index c1c375168..b81f93960 100644
Binary files a/v5.10.x/.doctrees/release_5_3_1.doctree and b/v5.10.x/.doctrees/release_5_3_1.doctree differ
diff --git a/v5.10.x/.doctrees/release_5_4_0.doctree b/v5.10.x/.doctrees/release_5_4_0.doctree
index 29cf79d47..3f77a55e5 100644
Binary files a/v5.10.x/.doctrees/release_5_4_0.doctree and b/v5.10.x/.doctrees/release_5_4_0.doctree differ
diff --git a/v5.10.x/.doctrees/release_5_4_1.doctree b/v5.10.x/.doctrees/release_5_4_1.doctree
index dc4c253b2..733e44d5f 100644
Binary files a/v5.10.x/.doctrees/release_5_4_1.doctree and b/v5.10.x/.doctrees/release_5_4_1.doctree differ
diff --git a/v5.10.x/.doctrees/release_5_5_0.doctree b/v5.10.x/.doctrees/release_5_5_0.doctree
index 37c763389..dcc045de8 100644
Binary files a/v5.10.x/.doctrees/release_5_5_0.doctree and b/v5.10.x/.doctrees/release_5_5_0.doctree differ
diff --git a/v5.10.x/.doctrees/release_5_6_0.doctree b/v5.10.x/.doctrees/release_5_6_0.doctree
index bd0a837d1..edfda18de 100644
Binary files a/v5.10.x/.doctrees/release_5_6_0.doctree and b/v5.10.x/.doctrees/release_5_6_0.doctree differ
diff --git a/v5.10.x/.doctrees/release_5_6_1.doctree b/v5.10.x/.doctrees/release_5_6_1.doctree
index 50f5cab33..60daf9df0 100644
Binary files a/v5.10.x/.doctrees/release_5_6_1.doctree and b/v5.10.x/.doctrees/release_5_6_1.doctree differ
diff --git a/v5.10.x/.doctrees/release_5_7_0.doctree b/v5.10.x/.doctrees/release_5_7_0.doctree
index 82254a032..60772f605 100644
Binary files a/v5.10.x/.doctrees/release_5_7_0.doctree and b/v5.10.x/.doctrees/release_5_7_0.doctree differ
diff --git a/v5.10.x/.doctrees/release_5_7_1.doctree b/v5.10.x/.doctrees/release_5_7_1.doctree
index 0b2eda238..2d1ca48b2 100644
Binary files a/v5.10.x/.doctrees/release_5_7_1.doctree and b/v5.10.x/.doctrees/release_5_7_1.doctree differ
diff --git a/v5.10.x/.doctrees/release_5_8_0.doctree b/v5.10.x/.doctrees/release_5_8_0.doctree
index 53141f912..36906d0b0 100644
Binary files a/v5.10.x/.doctrees/release_5_8_0.doctree and b/v5.10.x/.doctrees/release_5_8_0.doctree differ
diff --git a/v5.10.x/.doctrees/release_5_8_1.doctree b/v5.10.x/.doctrees/release_5_8_1.doctree
index 53e0db97f..fe8147dfc 100644
Binary files a/v5.10.x/.doctrees/release_5_8_1.doctree and b/v5.10.x/.doctrees/release_5_8_1.doctree differ
diff --git a/v5.10.x/.doctrees/release_5_8_2.doctree b/v5.10.x/.doctrees/release_5_8_2.doctree
index 6d4a01bfa..1f2d87e86 100644
Binary files a/v5.10.x/.doctrees/release_5_8_2.doctree and b/v5.10.x/.doctrees/release_5_8_2.doctree differ
diff --git a/v5.10.x/.doctrees/release_5_9_0.doctree b/v5.10.x/.doctrees/release_5_9_0.doctree
index b8926d632..e0cdae050 100644
Binary files a/v5.10.x/.doctrees/release_5_9_0.doctree and b/v5.10.x/.doctrees/release_5_9_0.doctree differ
diff --git a/v5.10.x/.doctrees/release_5_9_1.doctree b/v5.10.x/.doctrees/release_5_9_1.doctree
index 24ce3b08d..4aa4125fa 100644
Binary files a/v5.10.x/.doctrees/release_5_9_1.doctree and b/v5.10.x/.doctrees/release_5_9_1.doctree differ
diff --git a/v5.10.x/.doctrees/release_5_9_2.doctree b/v5.10.x/.doctrees/release_5_9_2.doctree
index ba9c33a4d..5d6f9e58c 100644
Binary files a/v5.10.x/.doctrees/release_5_9_2.doctree and b/v5.10.x/.doctrees/release_5_9_2.doctree differ
diff --git a/v5.10.x/.doctrees/releases.doctree b/v5.10.x/.doctrees/releases.doctree
index 64e1736b1..8e5901491 100644
Binary files a/v5.10.x/.doctrees/releases.doctree and b/v5.10.x/.doctrees/releases.doctree differ
diff --git a/v5.10.x/.doctrees/restart.doctree b/v5.10.x/.doctrees/restart.doctree
index 1b4f13bce..cc59fd6ee 100644
Binary files a/v5.10.x/.doctrees/restart.doctree and b/v5.10.x/.doctrees/restart.doctree differ
diff --git a/v5.10.x/.doctrees/riemann.doctree b/v5.10.x/.doctrees/riemann.doctree
index c4e32cffc..8f23f96a5 100644
Binary files a/v5.10.x/.doctrees/riemann.doctree and b/v5.10.x/.doctrees/riemann.doctree differ
diff --git a/v5.10.x/.doctrees/riemann/Shallow_water_Riemann_solvers.doctree b/v5.10.x/.doctrees/riemann/Shallow_water_Riemann_solvers.doctree
index 3ebf09711..c7e010190 100644
Binary files a/v5.10.x/.doctrees/riemann/Shallow_water_Riemann_solvers.doctree and b/v5.10.x/.doctrees/riemann/Shallow_water_Riemann_solvers.doctree differ
diff --git a/v5.10.x/.doctrees/ruled_rectangles.doctree b/v5.10.x/.doctrees/ruled_rectangles.doctree
index 43dc023fe..fdd1a6855 100644
Binary files a/v5.10.x/.doctrees/ruled_rectangles.doctree and b/v5.10.x/.doctrees/ruled_rectangles.doctree differ
diff --git a/v5.10.x/.doctrees/sealevel.doctree b/v5.10.x/.doctrees/sealevel.doctree
index d53c72cc2..bcea0fb42 100644
Binary files a/v5.10.x/.doctrees/sealevel.doctree and b/v5.10.x/.doctrees/sealevel.doctree differ
diff --git a/v5.10.x/.doctrees/set_eta_init.doctree b/v5.10.x/.doctrees/set_eta_init.doctree
index ef5833b0e..00bc4f25a 100644
Binary files a/v5.10.x/.doctrees/set_eta_init.doctree and b/v5.10.x/.doctrees/set_eta_init.doctree differ
diff --git a/v5.10.x/.doctrees/setaux_defaults.doctree b/v5.10.x/.doctrees/setaux_defaults.doctree
index 847e232b8..8d7dabd85 100644
Binary files a/v5.10.x/.doctrees/setaux_defaults.doctree and b/v5.10.x/.doctrees/setaux_defaults.doctree differ
diff --git a/v5.10.x/.doctrees/setenv.doctree b/v5.10.x/.doctrees/setenv.doctree
index 7a947b98e..80d9af2ff 100644
Binary files a/v5.10.x/.doctrees/setenv.doctree and b/v5.10.x/.doctrees/setenv.doctree differ
diff --git a/v5.10.x/.doctrees/setplot.doctree b/v5.10.x/.doctrees/setplot.doctree
index 55a8dfc5b..3ec125cdd 100644
Binary files a/v5.10.x/.doctrees/setplot.doctree and b/v5.10.x/.doctrees/setplot.doctree differ
diff --git a/v5.10.x/.doctrees/setrun.doctree b/v5.10.x/.doctrees/setrun.doctree
index 82b319c12..cfbab8bc5 100644
Binary files a/v5.10.x/.doctrees/setrun.doctree and b/v5.10.x/.doctrees/setrun.doctree differ
diff --git a/v5.10.x/.doctrees/setrun_amrclaw.doctree b/v5.10.x/.doctrees/setrun_amrclaw.doctree
index 2830a7260..4fcd56ccc 100644
Binary files a/v5.10.x/.doctrees/setrun_amrclaw.doctree and b/v5.10.x/.doctrees/setrun_amrclaw.doctree differ
diff --git a/v5.10.x/.doctrees/setrun_amrclaw_sample.doctree b/v5.10.x/.doctrees/setrun_amrclaw_sample.doctree
index 8542065dd..350c90083 100644
Binary files a/v5.10.x/.doctrees/setrun_amrclaw_sample.doctree and b/v5.10.x/.doctrees/setrun_amrclaw_sample.doctree differ
diff --git a/v5.10.x/.doctrees/setrun_geoclaw.doctree b/v5.10.x/.doctrees/setrun_geoclaw.doctree
index caa5561d1..16cccdcfe 100644
Binary files a/v5.10.x/.doctrees/setrun_geoclaw.doctree and b/v5.10.x/.doctrees/setrun_geoclaw.doctree differ
diff --git a/v5.10.x/.doctrees/setrun_sample.doctree b/v5.10.x/.doctrees/setrun_sample.doctree
index a8debf52f..588a0bcde 100644
Binary files a/v5.10.x/.doctrees/setrun_sample.doctree and b/v5.10.x/.doctrees/setrun_sample.doctree differ
diff --git a/v5.10.x/.doctrees/sharing.doctree b/v5.10.x/.doctrees/sharing.doctree
index 8c3f6984e..cf18d4d56 100644
Binary files a/v5.10.x/.doctrees/sharing.doctree and b/v5.10.x/.doctrees/sharing.doctree differ
diff --git a/v5.10.x/.doctrees/sphere_source.doctree b/v5.10.x/.doctrees/sphere_source.doctree
index b68adeb70..a4a01d531 100644
Binary files a/v5.10.x/.doctrees/sphere_source.doctree and b/v5.10.x/.doctrees/sphere_source.doctree differ
diff --git a/v5.10.x/.doctrees/sphinxdoc.doctree b/v5.10.x/.doctrees/sphinxdoc.doctree
index 38b295521..12e65dcbf 100644
Binary files a/v5.10.x/.doctrees/sphinxdoc.doctree and b/v5.10.x/.doctrees/sphinxdoc.doctree differ
diff --git a/v5.10.x/.doctrees/src1d_defaults.doctree b/v5.10.x/.doctrees/src1d_defaults.doctree
index fb2c17ac4..cdf9f36e7 100644
Binary files a/v5.10.x/.doctrees/src1d_defaults.doctree and b/v5.10.x/.doctrees/src1d_defaults.doctree differ
diff --git a/v5.10.x/.doctrees/src_defaults.doctree b/v5.10.x/.doctrees/src_defaults.doctree
index 8d83b5a4d..3bd702cc0 100644
Binary files a/v5.10.x/.doctrees/src_defaults.doctree and b/v5.10.x/.doctrees/src_defaults.doctree differ
diff --git a/v5.10.x/.doctrees/storm_module.doctree b/v5.10.x/.doctrees/storm_module.doctree
index d53172dbd..932e55468 100644
Binary files a/v5.10.x/.doctrees/storm_module.doctree and b/v5.10.x/.doctrees/storm_module.doctree differ
diff --git a/v5.10.x/.doctrees/surgedata.doctree b/v5.10.x/.doctrees/surgedata.doctree
index cb1943a3c..677db02ed 100644
Binary files a/v5.10.x/.doctrees/surgedata.doctree and b/v5.10.x/.doctrees/surgedata.doctree differ
diff --git a/v5.10.x/.doctrees/testing.doctree b/v5.10.x/.doctrees/testing.doctree
index 496957cba..70b75522d 100644
Binary files a/v5.10.x/.doctrees/testing.doctree and b/v5.10.x/.doctrees/testing.doctree differ
diff --git a/v5.10.x/.doctrees/timing.doctree b/v5.10.x/.doctrees/timing.doctree
index 90435e791..b80fc4119 100644
Binary files a/v5.10.x/.doctrees/timing.doctree and b/v5.10.x/.doctrees/timing.doctree differ
diff --git a/v5.10.x/.doctrees/topo.doctree b/v5.10.x/.doctrees/topo.doctree
index 2162948ed..acb667a13 100644
Binary files a/v5.10.x/.doctrees/topo.doctree and b/v5.10.x/.doctrees/topo.doctree differ
diff --git a/v5.10.x/.doctrees/topotools.doctree b/v5.10.x/.doctrees/topotools.doctree
index ad280e7e3..25e234dcc 100644
Binary files a/v5.10.x/.doctrees/topotools.doctree and b/v5.10.x/.doctrees/topotools.doctree differ
diff --git a/v5.10.x/.doctrees/topotools_module.doctree b/v5.10.x/.doctrees/topotools_module.doctree
index 6e73ffa12..d25c7b435 100644
Binary files a/v5.10.x/.doctrees/topotools_module.doctree and b/v5.10.x/.doctrees/topotools_module.doctree differ
diff --git a/v5.10.x/.doctrees/trouble.doctree b/v5.10.x/.doctrees/trouble.doctree
index e6514a11a..01305a56e 100644
Binary files a/v5.10.x/.doctrees/trouble.doctree and b/v5.10.x/.doctrees/trouble.doctree differ
diff --git a/v5.10.x/.doctrees/tsunamidata.doctree b/v5.10.x/.doctrees/tsunamidata.doctree
index d2f95900d..c970a0acb 100644
Binary files a/v5.10.x/.doctrees/tsunamidata.doctree and b/v5.10.x/.doctrees/tsunamidata.doctree differ
diff --git a/v5.10.x/.doctrees/user_routines.doctree b/v5.10.x/.doctrees/user_routines.doctree
index d6190202a..e372c0943 100644
Binary files a/v5.10.x/.doctrees/user_routines.doctree and b/v5.10.x/.doctrees/user_routines.doctree differ
diff --git a/v5.10.x/.doctrees/visit_plotting.doctree b/v5.10.x/.doctrees/visit_plotting.doctree
index 3a6ecfacb..2204c917e 100644
Binary files a/v5.10.x/.doctrees/visit_plotting.doctree and b/v5.10.x/.doctrees/visit_plotting.doctree differ
diff --git a/v5.10.x/.doctrees/vm.doctree b/v5.10.x/.doctrees/vm.doctree
index 1afb97a07..bdf43388e 100644
Binary files a/v5.10.x/.doctrees/vm.doctree and b/v5.10.x/.doctrees/vm.doctree differ
diff --git a/v5.10.x/.doctrees/wp_algorithms.doctree b/v5.10.x/.doctrees/wp_algorithms.doctree
index 32697b7c0..ac742ed81 100644
Binary files a/v5.10.x/.doctrees/wp_algorithms.doctree and b/v5.10.x/.doctrees/wp_algorithms.doctree differ
diff --git a/v5.10.x/_sources/about.rst.txt b/v5.10.x/_sources/about.rst.txt
index ecaf8a148..2b99d1464 100644
--- a/v5.10.x/_sources/about.rst.txt
+++ b/v5.10.x/_sources/about.rst.txt
@@ -117,8 +117,8 @@ Citing this work
 If you use Clawpack in publications, please cite the software itself as
 well, with a citation similar to the following::
 
-    Clawpack Development Team (2020), Clawpack Version 5.7.1,
-    http://www.clawpack.org, doi: 10.5281/zenodo.4025432
+    Clawpack Development Team (2024), Clawpack Version 5.10.0,
+    http://www.clawpack.org, doi: 10.5281/zenodo.10896214
 
 Here's the bibtex::
 
@@ -126,9 +126,9 @@ Here's the bibtex::
         title={Clawpack software}, 
         author={{Clawpack Development Team}}, 
         url={http://www.clawpack.org}, 
-        note={Version 5.7.1},
-        doi={https://doi.org/10.5281/zenodo.4025432},
-        year={2020}}
+        note={Version 5.10.0},
+        doi={https://doi.org/10.5281/zenodo.10896214},
+        year={2024}}
 
 Please fill in the version number that you used, and its year, with the
 appropriate DOI from `Zenodo `_, if available.  
diff --git a/v5.10.x/_sources/changes_to_master.rst.txt b/v5.10.x/_sources/changes_to_master.rst.txt
index cfb3f90b3..6bec44867 100644
--- a/v5.10.x/_sources/changes_to_master.rst.txt
+++ b/v5.10.x/_sources/changes_to_master.rst.txt
@@ -3,12 +3,12 @@
 .. _changes_to_master:
 
 ===============================
-Changes to master since v5.9.2
+Changes to master since v5.10.0
 ===============================
 
 
 Follow the links to see changes that have been made to the master branch of
-each repository since the last release (v5.9.2) on November 4, 2023.
+each repository since the last release (v5.10.0) on March 29, 2024.
 
 These changes should appear in the next release.  If you need them now,
 see :ref:`developers` for instructions on cloning and installing from the
@@ -31,48 +31,48 @@ Changes to classic
 
 
 See `classic diffs
-`_
+`_
 
 Changes to clawutil
 -------------------
 
 
 See `clawutil diffs
-`_
+`_
 
 Changes to visclaw
 ------------------
 
  
 See `visclaw diffs
-`_
+`_
 
 Changes to riemann
 ------------------
 
 
 See `riemann diffs
-`_
+`_
 
 Changes to amrclaw
 ------------------
 
 
 See `amrclaw diffs
-`_
+`_
 
 Changes to geoclaw
 ------------------
 
 
-See `geoclaw diffs `_
+See `geoclaw diffs `_
 
 
 Changes to PyClaw
 ------------------
 
 
-See `pyclaw diffs `_
+See `pyclaw diffs `_
 
 ===========================
 Other Clawpack Repositories
@@ -82,10 +82,10 @@ The repositories below are not included in the Clawpack tarfile or pip
 install, but changes to these repositories may also be of interest.
 
 - `apps diffs
-  `_
+  `_
 
 - `doc diffs
   `_
 
 - `docker-files diffs
-  `_
+  `_
diff --git a/v5.10.x/_sources/installing_fortcodes.rst.txt b/v5.10.x/_sources/installing_fortcodes.rst.txt
index 7f30a9c34..c52553afa 100644
--- a/v5.10.x/_sources/installing_fortcodes.rst.txt
+++ b/v5.10.x/_sources/installing_fortcodes.rst.txt
@@ -36,9 +36,9 @@ Download a tar file from one of these sources:
 
 After downloading a tar file you can do, e.g. ::
 
-    tar -xzf clawpack-v5.9.2.tar.gz
-    cd clawpack-v5.9.2
-    export CLAW=/full/path/to/clawpack-v5.9.2  # in bash
+    tar -xzf clawpack-v5.10.0.tar.gz
+    cd clawpack-v5.10.0
+    export CLAW=/full/path/to/clawpack-v5.10.0  # in bash
     
 The last command sets an environment variable when using the bash shell.
 The syntax may be different in other shells.  Replace `/full/path/to`
@@ -60,7 +60,7 @@ See :ref:`developers` for more details, but the basic commands are::
 
     git clone https://github.com/clawpack/clawpack.git
     cd clawpack
-    git checkout v5.9.2     # or an older version; `git tag -l` to list options
+    git checkout v5.10.0     # or an older version; `git tag -l` to list options
     git submodule init      # for repositories pyclaw, clawutil, visclaw, etc.
     git submodule update    # clones all the submodule repositories
     export CLAW=/full/path/to/clawpack    # in bash
diff --git a/v5.10.x/_sources/installing_pip.rst.txt b/v5.10.x/_sources/installing_pip.rst.txt
index c15ac6829..607c758d6 100644
--- a/v5.10.x/_sources/installing_pip.rst.txt
+++ b/v5.10.x/_sources/installing_pip.rst.txt
@@ -32,7 +32,7 @@ Clawpack is via::
 
 or, more specifically, ::
 
-    pip install --user clawpack==v5.9.2
+    pip install --user clawpack==v5.10.0
 
 or you can choose a previous version from the `PyPi history `__.
 
@@ -56,7 +56,7 @@ following command
 want to change anything in this command)**::  
 
     pip install --src=$HOME/clawpack_src --user --no-build-isolation -e \
-        git+https://github.com/clawpack/clawpack.git@v5.9.2#egg=clawpack
+        git+https://github.com/clawpack/clawpack.git@v5.10.0#egg=clawpack
         
         
 **Notes:** 
@@ -71,7 +71,7 @@ want to change anything in this command)**::
   :ref:`installing_options` if you want more control.
 
 - This will download Clawpack (via a git clone) into the directory
-  `$HOME/clawpack_src/clawpack-v5.9.2`.  The top 
+  `$HOME/clawpack_src/clawpack-v5.10.0`.  The top 
   installation directory can be changed by modifying the ``--src`` target 
   (or omit this part to put it in your current working directory).
   If you have already downloaded Clawpack via a different mechanism then
@@ -92,11 +92,11 @@ want to change anything in this command)**::
   
 - In order to use the Fortran codes within Clawpack (`classic`,
   `amrclaw`, or `geoclaw`), you should then set the environment
-  variable `CLAW` to point to the `clawpack-v5.9.2` directory within
+  variable `CLAW` to point to the `clawpack-v5.10.0` directory within
   the installation directory `$HOME/clawpack_src`, and `FC` to point
   to the desired Fortran compiler, e.g. in the bash shell::
   
-        export CLAW=$HOME/clawpack_src/clawpack-v5.9.2
+        export CLAW=$HOME/clawpack_src/clawpack-v5.10.0
         export FC=gfortran
 
 
diff --git a/v5.10.x/_sources/releases.rst.txt b/v5.10.x/_sources/releases.rst.txt
index 64df88ffd..8a0bf4e59 100644
--- a/v5.10.x/_sources/releases.rst.txt
+++ b/v5.10.x/_sources/releases.rst.txt
@@ -37,8 +37,8 @@ can also be referenced with the single DOI
 `10.17605/osf.io/kmw6h `__.
 See :ref:`citing` for more information on how best to cite Clawpack.
 
-* :ref:`release_5_10_0`  -- TBA
-  `[DOI 10.5281/zenodo.XX] `_
+* :ref:`release_5_10_0`  -- March 29, 2024
+  `[DOI 10.5281/zenodo.10896214] `_
 * :ref:`release_5_9_2`  -- November 4, 2023
   `[DOI 10.5281/zenodo.10076317] `_
 * :ref:`release_5_9_1`  -- October 2, 2023
diff --git a/v5.10.x/about.html b/v5.10.x/about.html
index efeefa0ac..be2cb671c 100644
--- a/v5.10.x/about.html
+++ b/v5.10.x/about.html
@@ -174,8 +174,8 @@ 
          License
          Citing this work
          
 
          If you use Clawpack in publications, please cite the software itself as
 well, with a citation similar to the following:
          
-
          Clawpack Development Team (2020), Clawpack Version 5.7.1,
-http://www.clawpack.org, doi: 10.5281/zenodo.4025432
+
          Clawpack Development Team (2024), Clawpack Version 5.10.0,
+http://www.clawpack.org, doi: 10.5281/zenodo.10896214
 
          
 
          
 
          Here’s the bibtex:
          
@@ -183,9 +183,9 @@ 
          Licensetitle={Clawpack software},
     author={{Clawpack Development Team}},
     url={http://www.clawpack.org},
-    note={Version 5.7.1},
-    doi={https://doi.org/10.5281/zenodo.4025432},
-    year={2020}}
+    note={Version 5.10.0},
+    doi={https://doi.org/10.5281/zenodo.10896214},
+    year={2024}}
 
          
 
          
 
          Please fill in the version number that you used, and its year, with the
diff --git a/v5.10.x/changes_to_master.html b/v5.10.x/changes_to_master.html
index 537c283d0..f5b489a84 100644
--- a/v5.10.x/changes_to_master.html
+++ b/v5.10.x/changes_to_master.html
@@ -6,7 +6,7 @@
     
     
 
-    Changes to master since v5.9.2 — Clawpack 5.10.x documentation
+    Changes to master since v5.10.0 — Clawpack 5.10.x documentation
     
     
     
@@ -67,7 +67,7 @@ 
          Navigation
          
                     modules |
          • 
         
        • Clawpack 5.10.x documentation »
          • 
-        
        • Changes to master since v5.9.2
          •  
+        
        • Changes to master since v5.10.0
          •  
       
        
     
      
 
@@ -76,10 +76,10 @@ 
    Navigation
    
         
    
           
    
             
-  
    
-
    Changes to master since v5.9.2
    
+  
    
+
    Changes to master since v5.10.0
    
 
    Follow the links to see changes that have been made to the master branch of
-each repository since the last release (v5.9.2) on November 4, 2023.
    
+each repository since the last release (v5.10.0) on March 29, 2024.
    
 
    These changes should appear in the next release.  If you need them now,
 see Developers’ Guide for instructions on cloning and installing from the
 master branch.
    
@@ -94,31 +94,31 @@ 
    General changes
 
    Changes to classic
    
-
    See classic diffs
    
+
    See classic diffs
    
 
    
 
    
 
    Changes to clawutil
    
-
    See clawutil diffs
    
+
    See clawutil diffs
    
 
    
 
    
 
    Changes to visclaw
    
-
    See visclaw diffs
    
+
    See visclaw diffs
    
 
    
 
    
 
    Changes to riemann
    
-
    See riemann diffs
    
+
    See riemann diffs
    
 
    
 
    
 
    Changes to amrclaw
    
-
    See amrclaw diffs
    
+
    See amrclaw diffs
    
 
    
 
    
 
    Changes to geoclaw
    
-
    See geoclaw diffs
    
+
    See geoclaw diffs
    
 
    
 
    
 
    Changes to PyClaw
    
-
    See pyclaw diffs
    
+
    See pyclaw diffs
    
 
    
 
    
 
    
@@ -126,9 +126,9 @@ 
    Other Clawpack Repositories
-
  • apps diffs
    • 
+
  • apps diffs
    • 
 
  • doc diffs
    • 
-
  • docker-files diffs
    • 
+
  • docker-files diffs
    • 
 
 
    
 
@@ -147,7 +147,7 @@ 
    Version 5.10.x
    
   
    
     
    Table of Contents
    • diff --git a/v5.10.x/installing_fortcodes.html b/v5.10.x/installing_fortcodes.html index a4dc35041..83631929f 100644 --- a/v5.10.x/installing_fortcodes.html +++ b/v5.10.x/installing_fortcodes.html @@ -106,9 +106,9 @@

    Navigation

    Citing this work)

    After downloading a tar file you can do, e.g.

    -
    tar -xzf clawpack-v5.9.2.tar.gz
-cd clawpack-v5.9.2
-export CLAW=/full/path/to/clawpack-v5.9.2  # in bash
+
    tar -xzf clawpack-v5.10.0.tar.gz
+cd clawpack-v5.10.0
+export CLAW=/full/path/to/clawpack-v5.10.0  # in bash
 
    
 
    
 
    The last command sets an environment variable when using the bash shell.
@@ -126,7 +126,7 @@ 
    Navigation
    
 See Developers’ Guide for more details, but the basic commands are:
    
 
    git clone https://github.com/clawpack/clawpack.git
 cd clawpack
-git checkout v5.9.2     # or an older version; `git tag -l` to list options
+git checkout v5.10.0     # or an older version; `git tag -l` to list options
 git submodule init      # for repositories pyclaw, clawutil, visclaw, etc.
 git submodule update    # clones all the submodule repositories
 export CLAW=/full/path/to/clawpack    # in bash
diff --git a/v5.10.x/installing_pip.html b/v5.10.x/installing_pip.html
index 98397a45b..e2e8417c0 100644
--- a/v5.10.x/installing_pip.html
+++ b/v5.10.x/installing_pip.html
@@ -104,7 +104,7 @@ 
    Navigation
    
 
    
 
    
 
    or, more specifically,
    
-
    pip install --user clawpack==v5.9.2
+
    pip install --user clawpack==v5.10.0
 
    
 
    
 
    or you can choose a previous version from the PyPi history.
    
@@ -122,7 +122,7 @@ 
    Navigation
    
 (you might want to first read the notes below to see if you
 want to change anything in this command):
    
 
    pip install --src=$HOME/clawpack_src --user --no-build-isolation -e \
-    git+https://github.com/clawpack/clawpack.git@v5.9.2#egg=clawpack
+    git+https://github.com/clawpack/clawpack.git@v5.10.0#egg=clawpack
 
    
 
    
 
    Notes:
    
@@ -135,7 +135,7 @@ 
    Navigation
    
 convert Fortran Riemann solvers to Python versions.  See
 installing_options if you want more control.
    
 
  • This will download Clawpack (via a git clone) into the directory
-$HOME/clawpack_src/clawpack-v5.9.2.  The top
+$HOME/clawpack_src/clawpack-v5.10.0.  The top
 installation directory can be changed by modifying the --src target
 (or omit this part to put it in your current working directory).
 If you have already downloaded Clawpack via a different mechanism then
@@ -152,10 +152,10 @@ 
    Navigation
    
 site-packages directory and delete everything else.)
    • 
 
  • In order to use the Fortran codes within Clawpack (classic,
 amrclaw, or geoclaw), you should then set the environment
-variable CLAW to point to the clawpack-v5.9.2 directory within
+variable CLAW to point to the clawpack-v5.10.0 directory within
 the installation directory $HOME/clawpack_src, and FC to point
 to the desired Fortran compiler, e.g. in the bash shell:
    
-
    export CLAW=$HOME/clawpack_src/clawpack-v5.9.2
+
    export CLAW=$HOME/clawpack_src/clawpack-v5.10.0
 export FC=gfortran
 
    
 
    
diff --git a/v5.10.x/objects.inv b/v5.10.x/objects.inv
index 3c3825d5d..906168a78 100644
Binary files a/v5.10.x/objects.inv and b/v5.10.x/objects.inv differ
diff --git a/v5.10.x/release_5_10_0.html b/v5.10.x/release_5_10_0.html
index 20ba114cb..7f14c9021 100644
--- a/v5.10.x/release_5_10_0.html
+++ b/v5.10.x/release_5_10_0.html
@@ -82,7 +82,7 @@ 
    Navigation
    
 
    Permanent DOI: http://doi.org/10.5281/zenodo.XX
    
 
    Changes relative to Clawpack 5.9.2 (November 4, 2023) are shown below.
    
 
    To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
    
+released, see Changes to master since v5.10.0.
    
 
    Follow the links to see changes that have been made to the master branch of
 each repository since the last release (v5.10.0) on XX.
    
 
    These changes should appear in the next release.  If you need them now,
diff --git a/v5.10.x/release_5_6_0.html b/v5.10.x/release_5_6_0.html
index 9c5ac72d9..4f9aa1a14 100644
--- a/v5.10.x/release_5_6_0.html
+++ b/v5.10.x/release_5_6_0.html
@@ -81,7 +81,7 @@ 
    Navigation
    
 
    Clawpack 5.6.0 was released on June 2, 2019.  See Installing Clawpack.
    
 
    Changes relative to Clawpack 5.5.0 (Aug 28, 2018) are shown below.
    
 
    To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
    
+released, see Changes to master since v5.10.0.
    
 
    
 
    Changes that are not backward compatible
    
 
    
diff --git a/v5.10.x/release_5_6_1.html b/v5.10.x/release_5_6_1.html
index 4938954fd..64755ec45 100644
--- a/v5.10.x/release_5_6_1.html
+++ b/v5.10.x/release_5_6_1.html
@@ -81,7 +81,7 @@ 
    Navigation
    
 
    Clawpack 5.6.1 was released on October 28, 2019. See Installing Clawpack.
    
 
    Changes relative to Clawpack 5.6.0 (June 2, 2019) are shown below.
    
 
    To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
    
+released, see Changes to master since v5.10.0.
    
 
    
 
    Changes that are not backward compatible
    
 
    $CLAW/amrclaw/src/2d/amr_module.f90 has changed, so do a make new in
diff --git a/v5.10.x/release_5_7_0.html b/v5.10.x/release_5_7_0.html
index dead5ca19..cfdb5d035 100644
--- a/v5.10.x/release_5_7_0.html
+++ b/v5.10.x/release_5_7_0.html
@@ -83,7 +83,7 @@ 
    Navigation
    
 [DOI 10.5281/zenodo.3764278].
    
 
    Changes relative to Clawpack 5.6.1 (October 28, 2019) are shown below.
    
 
    To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
    
+released, see Changes to master since v5.10.0.
    
 
    
 
    Python support
    
 
    As of v5.7.0 we are no longer supporting Python 2.7, and Python 3.x is
diff --git a/v5.10.x/release_5_7_1.html b/v5.10.x/release_5_7_1.html
index 32929a3b7..a4badd74e 100644
--- a/v5.10.x/release_5_7_1.html
+++ b/v5.10.x/release_5_7_1.html
@@ -83,7 +83,7 @@ 
    Navigation
    
 [DOI 10.5281/zenodo.4025432].
    
 
    Changes relative to Clawpack 5.7.0 (April 23, 2020) are shown below.
    
 
    To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
    
+released, see Changes to master since v5.10.0.
    
 
    
 
    Changes that are not backward compatible
    
 
      
diff --git a/v5.10.x/release_5_8_0.html b/v5.10.x/release_5_8_0.html
index ad16f2636..32ae05e1a 100644
--- a/v5.10.x/release_5_8_0.html
+++ b/v5.10.x/release_5_8_0.html
@@ -82,7 +82,7 @@ 
      Navigation
      
 
      Permanent DOI: http://doi.org/10.5281/zenodo.4503024
      
 
      Changes relative to Clawpack 5.7.1 (Sept. 11, 2020) are shown below.
      
 
      To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
      
+released, see Changes to master since v5.10.0.
      
 
      
 
      Changes that are not backward compatible
      
 
        
diff --git a/v5.10.x/release_5_8_1.html b/v5.10.x/release_5_8_1.html
index b68c99bf1..3acb7e0d1 100644
--- a/v5.10.x/release_5_8_1.html
+++ b/v5.10.x/release_5_8_1.html
@@ -84,7 +84,7 @@ 
        Navigation
        
 
        Permanent DOI: http://doi.org/10.5281/zenodo.5595424
        
 
        Changes relative to Clawpack 5.8.0 (February 4, 2021) are shown below.
        
 
        To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
        
+released, see Changes to master since v5.10.0.
        
 
        
 
        Changes that are not backward compatible
        
 
        
diff --git a/v5.10.x/release_5_8_2.html b/v5.10.x/release_5_8_2.html
index f78dc6d43..03fe1b8f7 100644
--- a/v5.10.x/release_5_8_2.html
+++ b/v5.10.x/release_5_8_2.html
@@ -82,7 +82,7 @@ 
        Navigation
        
 
        Permanent DOI: http://doi.org/10.5281/zenodo.5781749
        
 
        Changes relative to Clawpack 5.8.1 (October 19, 2021) are shown below.
        
 
        To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
        
+released, see Changes to master since v5.10.0.
        
 
        
 
        Changes that are not backward compatible
        
 
        None.
        
diff --git a/v5.10.x/release_5_9_0.html b/v5.10.x/release_5_9_0.html
index 637c58070..9872da50c 100644
--- a/v5.10.x/release_5_9_0.html
+++ b/v5.10.x/release_5_9_0.html
@@ -82,7 +82,7 @@ 
        Navigation
        
 
        Permanent DOI: http://doi.org/10.5281/zenodo.7026045
        
 
        Changes relative to Clawpack 5.8.2 (December 14, 2021) are shown below.
        
 
        To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
        
+released, see Changes to master since v5.10.0.
        
 
        Follow the links to see changes that have been made to the master branch of
 each repository since the last release (v5.9.0) on August 26, 2022.
        
 
        These changes should appear in the next release.  If you need them now,
diff --git a/v5.10.x/release_5_9_1.html b/v5.10.x/release_5_9_1.html
index 21d4510ea..9e1070650 100644
--- a/v5.10.x/release_5_9_1.html
+++ b/v5.10.x/release_5_9_1.html
@@ -82,7 +82,7 @@ 
        Navigation
        
 
        Permanent DOI: http://doi.org/10.5281/zenodo.8400237
        
 
        Changes relative to Clawpack 5.9.0 (August 26, 2022) are shown below.
        
 
        To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
        
+released, see Changes to master since v5.10.0.
        
 
        Follow the links to see changes that have been made to the master branch of
 each repository since the last release (v5.9.1) on October 2, 2023.
        
 
        These changes should appear in the next release.  If you need them now,
diff --git a/v5.10.x/release_5_9_2.html b/v5.10.x/release_5_9_2.html
index 83bfb61e0..8907455d2 100644
--- a/v5.10.x/release_5_9_2.html
+++ b/v5.10.x/release_5_9_2.html
@@ -82,7 +82,7 @@ 
        Navigation
        
 
        Permanent DOI: http://doi.org/10.5281/zenodo.XXX
        
 
        Changes relative to Clawpack 5.9.2 (October 2, 2023) are shown below.
        
 
        To see more recent changes that are in the the master branch but not yet
-released, see Changes to master since v5.9.2.
        
+released, see Changes to master since v5.10.0.
        
 
        Follow the links to see changes that have been made to the master branch of
 each repository since the last release (v5.9.2) on November 4, 2023.
        
 
        These changes should appear in the next release.  If you need them now,
diff --git a/v5.10.x/releases.html b/v5.10.x/releases.html
index 3c61e42ea..cf2ac9bec 100644
--- a/v5.10.x/releases.html
+++ b/v5.10.x/releases.html
@@ -97,7 +97,7 @@ 
        Other notes:PyClaw changelog.
 Starting with v5.9.0, changes will be recorded in the release notes along
 with those for other repositories.
        
-
      • See Changes to master since v5.9.2 for changes to the master branch on Github
+
      • See Changes to master since v5.10.0 for changes to the master branch on Github
 that are not in the most recent release.
        • 
 
      • The “dev” branch of the
 documentation (selected under Versions on the menu
@@ -114,8 +114,8 @@ 
        Releases:10.17605/osf.io/kmw6h.
 See Citing this work for more information on how best to cite Clawpack.
        
 
          
-
        • v5.10.0 release notes  – TBA
-[DOI 10.5281/zenodo.XX]
          • 
+
        • v5.10.0 release notes  – March 29, 2024
+[DOI 10.5281/zenodo.10896214]
          • 
 
        • v5.9.2 release notes  – November 4, 2023
 [DOI 10.5281/zenodo.10076317]
          • 
 
        • v5.9.1 release notes  – October 2, 2023
diff --git a/v5.10.x/searchindex.js b/v5.10.x/searchindex.js
index 3618dfb10..fc29536ce 100644
--- a/v5.10.x/searchindex.js
+++ b/v5.10.x/searchindex.js
@@ -1 +1 @@
-Search.setIndex({"docnames": ["ClawPlotAxes", "ClawPlotData", "ClawPlotFigure", "ClawPlotItem", "about", "adjoint", "amr_algorithm", "amrclaw", "amrclaw1d", "amrclaw_doxygen", "amrclaw_flowcharts", "application_documentation", "apps", "aws", "b4run", "b4step_defaults", "bc", "biblio", "bouss1d", "bouss2d", "changes_to_master", "claw43to46", "claw46to50", "claw4x", "clawpack5", "clawpack_components", "community", "contents", "contribute_apps", "current_data", "developers", "docker_image", "dtopotools_module", "f77_vs_f90", "fgmax", "fgmax_tools_module", "fgout", "fgout_tools_module", "first_run", "first_run_fortran", "first_run_pyclaw", "flagregions", "force_dry", "fortran", "fortran_compilers", "fvmbook", "galleries", "gauges", "geoclaw", "geoclaw1d", "geoclaw_started", "geoclaw_util_module", "geohints", "geoplot", "git_versions", "googleearth_plotting", "gpu", "grid_registration", "howto_doc", "howto_release", "installing", "installing_fortcodes", "installing_pip", "kmltools_module", "lagrangian_gauges", "license", "makefiles", "makefiles_library", "manning", "mapc2p", "marching_front", "matlab_plotting", "nearshore_interp", "netcdf", "newapp", "okada", "openmp", "output_styles", "packages", "photos", "plotexamples", "plotting", "plotting_faq", "plotting_geoclaw", "plotting_python", "prereqs", "pyclaw/about", "pyclaw/basics", "pyclaw/classes", "pyclaw/clawpack_and_pyclaw", "pyclaw/cloud", "pyclaw/controller", "pyclaw/evolve/limiters", "pyclaw/examples", "pyclaw/geometry", "pyclaw/going_further", "pyclaw/index", "pyclaw/io", "pyclaw/output", "pyclaw/parallel", "pyclaw/plotting", "pyclaw/problem", "pyclaw/rp", "pyclaw/solution", "pyclaw/solvers", "pyclaw/started", "pyclaw/state", "pyclaw/troubleshooting", "pyclaw/tutorial", "pyclaw/util", "python", "python_path", "qinit_defaults", "quick_surge", "quick_tsunami", "refinement", "regression", "release_5_0_0", "release_5_10_0", "release_5_1_0", "release_5_2_0", "release_5_2_1", "release_5_2_2", "release_5_3_0", "release_5_3_1", "release_5_4_0", "release_5_4_1", "release_5_5_0", "release_5_6_0", "release_5_6_1", "release_5_7_0", "release_5_7_1", "release_5_8_0", "release_5_8_1", "release_5_8_2", "release_5_9_0", "release_5_9_1", "release_5_9_2", "releases", "restart", "riemann", "riemann/Shallow_water_Riemann_solvers", "ruled_rectangles", "sealevel", "set_eta_init", "setaux_defaults", "setenv", "setplot", "setrun", "setrun_amrclaw", "setrun_amrclaw_sample", "setrun_geoclaw", "setrun_sample", "sharing", "sphere_source", "sphinxdoc", "src1d_defaults", "src_defaults", "storm_module", "surgedata", "testing", "timing", "topo", "topotools", "topotools_module", "trouble", "tsunamidata", "user_routines", "visit_plotting", "vm", "wp_algorithms"], "filenames": ["ClawPlotAxes.rst", "ClawPlotData.rst", "ClawPlotFigure.rst", "ClawPlotItem.rst", "about.rst", "adjoint.rst", "amr_algorithm.rst", "amrclaw.rst", "amrclaw1d.rst", "amrclaw_doxygen.rst", "amrclaw_flowcharts.rst", "application_documentation.rst", "apps.rst", "aws.rst", "b4run.rst", "b4step_defaults.rst", "bc.rst", "biblio.rst", "bouss1d.rst", "bouss2d.rst", "changes_to_master.rst", "claw43to46.rst", "claw46to50.rst", "claw4x.rst", "clawpack5.rst", "clawpack_components.rst", "community.rst", "contents.rst", "contribute_apps.rst", "current_data.rst", "developers.rst", "docker_image.rst", "dtopotools_module.rst", "f77_vs_f90.rst", "fgmax.rst", "fgmax_tools_module.rst", "fgout.rst", "fgout_tools_module.rst", "first_run.rst", "first_run_fortran.rst", "first_run_pyclaw.rst", "flagregions.rst", "force_dry.rst", "fortran.rst", "fortran_compilers.rst", "fvmbook.rst", "galleries.rst", "gauges.rst", "geoclaw.rst", "geoclaw1d.rst", "geoclaw_started.rst", "geoclaw_util_module.rst", "geohints.rst", "geoplot.rst", "git_versions.rst", "googleearth_plotting.rst", "gpu.rst", "grid_registration.rst", "howto_doc.rst", "howto_release.rst", "installing.rst", "installing_fortcodes.rst", "installing_pip.rst", "kmltools_module.rst", "lagrangian_gauges.rst", "license.rst", "makefiles.rst", "makefiles_library.rst", "manning.rst", "mapc2p.rst", "marching_front.rst", "matlab_plotting.rst", "nearshore_interp.rst", "netcdf.rst", "newapp.rst", "okada.rst", "openmp.rst", "output_styles.rst", "packages.rst", "photos.rst", "plotexamples.rst", "plotting.rst", "plotting_faq.rst", "plotting_geoclaw.rst", "plotting_python.rst", "prereqs.rst", "pyclaw/about.rst", "pyclaw/basics.rst", "pyclaw/classes.rst", "pyclaw/clawpack_and_pyclaw.rst", "pyclaw/cloud.rst", "pyclaw/controller.rst", "pyclaw/evolve/limiters.rst", "pyclaw/examples.rst", "pyclaw/geometry.rst", "pyclaw/going_further.rst", "pyclaw/index.rst", "pyclaw/io.rst", "pyclaw/output.rst", "pyclaw/parallel.rst", "pyclaw/plotting.rst", "pyclaw/problem.rst", "pyclaw/rp.rst", "pyclaw/solution.rst", "pyclaw/solvers.rst", "pyclaw/started.rst", "pyclaw/state.rst", "pyclaw/troubleshooting.rst", "pyclaw/tutorial.rst", "pyclaw/util.rst", "python.rst", "python_path.rst", "qinit_defaults.rst", "quick_surge.rst", "quick_tsunami.rst", "refinement.rst", "regression.rst", "release_5_0_0.rst", "release_5_10_0.rst", "release_5_1_0.rst", "release_5_2_0.rst", "release_5_2_1.rst", "release_5_2_2.rst", "release_5_3_0.rst", "release_5_3_1.rst", "release_5_4_0.rst", "release_5_4_1.rst", "release_5_5_0.rst", "release_5_6_0.rst", "release_5_6_1.rst", "release_5_7_0.rst", "release_5_7_1.rst", "release_5_8_0.rst", "release_5_8_1.rst", "release_5_8_2.rst", "release_5_9_0.rst", "release_5_9_1.rst", "release_5_9_2.rst", "releases.rst", "restart.rst", "riemann.rst", "riemann/Shallow_water_Riemann_solvers.rst", "ruled_rectangles.rst", "sealevel.rst", "set_eta_init.rst", "setaux_defaults.rst", "setenv.rst", "setplot.rst", "setrun.rst", "setrun_amrclaw.rst", "setrun_amrclaw_sample.rst", "setrun_geoclaw.rst", "setrun_sample.rst", "sharing.rst", "sphere_source.rst", "sphinxdoc.rst", "src1d_defaults.rst", "src_defaults.rst", "storm_module.rst", "surgedata.rst", "testing.rst", "timing.rst", "topo.rst", "topotools.rst", "topotools_module.rst", "trouble.rst", "tsunamidata.rst", "user_routines.rst", "visit_plotting.rst", "vm.rst", "wp_algorithms.rst"], "titles": ["ClawPlotAxes", "ClawPlotData", "ClawPlotFigure", "ClawPlotItem", "About this software", "Guiding AMR with adjoint flagging", "Adaptive mesh refinement (AMR) algorithms", "AMRClaw Description and Detailed Contents", "AMRClaw for 1d problems", "Doxygen documentation of AMRClaw", "AMRClaw Flowcharts", "Application documentation", "Clawpack Applications repository", "Amazon Web Services EC2 Clawpack AMI", "b4run function", "b4step default routines", "Boundary conditions", "Bibliography", "Boussinesq solvers in One Space Dimension", "Boussinesq solvers in Two Space Dimensions", "Changes to master since v5.9.2", "Converting from Clawpack 4.3 to 4.6", "Converting from Clawpack 4.6 to 5.0", "Clawpack 4.x links", "Changes in Clawpack 5.0", "Clawpack components", "Clawpack Community", "Full Table of Contents", "Contributing examples and applications", "current_data", "Developers\u2019 Guide", "Docker for Clawpack", "dtopotools module for moving topography", "Fortran 77 vs. Fortran 90 files", "Fixed grid monitoring (fgmax)", "fgmax_tools module for working with fgmax grids", "Fixed grid output (fgout)", "fgout_tools module for working with fgout grids", "Running an example", "Testing your Fortran installation and running an example", "Testing a PyClaw installation and running an example", "Specifying flagregions for adaptive refinement", "Force Cells to be Dry Initially", "Fortran version", "Fortran Compilers", "Examples from the book FVMHP", "Clawpack Gallery", "Gauges", "GeoClaw Description and Detailed Contents", "GeoClaw in One Space Dimension", "Getting started with GeoClaw", "geoclaw.util module of utility functions", "Cautionary Hints on using GeoClaw", "GeoClaw plotting tools", "Keeping track of repository versions with Git", "Visualizing GeoClaw results in Google Earth", "Using the GPU version of Clawpack", "Grid registration", "Guide for updating this documentation", "Guide for doing a Clawpack release", "Installing Clawpack", "Options for installing Clawpack Fortran codes", "pip install instructions", "kmltools module of utility functions", "Lagrangian gauges for particle tracking", "License", "Clawpack Makefiles", "Library routines in Makefiles", "Manning friction term", "The mapc2p function", "Marching Front algorithm", "Plotting using Matlab", "Nearshore interpolation", "Using NetCDF output", "Creating a new application directory", "Earthquake sources: Fault slip and the Okada model", "Using OpenMP", "Output data sytles and formats", "Which Clawpack solver should I use?", "Clawpack Community Photos", "Plotting examples", "Plotting with Visclaw", "Plotting hints and FAQ", "Plotting routines for GeoClaw", "Plotting options in Python", "Installation Prerequisites", "About PyClaw", "PyClaw Basics", "Understanding Pyclaw Classes", "Porting a problem from Clawpack 4.6.x to PyClaw", "Running PyClaw in the cloud", "Pyclaw Controller Class", "Pyclaw Limiters", "Working with PyClaw\u2019s built-in examples", "PyClaw Geometry", "Going Further", "PyClaw", "Pyclaw Input/Output Package", "PyClaw output", "Running in parallel", "Plotting PyClaw results", "Setting up your own problem", "Riemann Solver Package", "PyClaw Solutions", "Using PyClaw\u2019s solvers: Classic and SharpClaw", "Installing PyClaw", "PyClaw State", "Troubleshooting", "PyClaw tutorial: Solve the acoustics equations", "Pyclaw Utility Module", "Python Hints", "Python path", "qinit default routines", "Quick start guide for storm surge modeling", "Quick start guide for tsunami modeling", "AMR refinement criteria", "Regression testing", "v5.0.0 release notes", "v5.10.0 release notes", "v5.1.0 release notes", "v5.2.0 release notes", "v5.2.1 release notes", "v5.2.2 release notes", "v5.3.0 release notes", "v5.3.1 release notes", "v5.4.0 release notes", "v5.4.1 release notes", "v5.5.0 release notes", "v5.6.0 release notes", "v5.6.1 release notes", "v5.7.0 release notes", "v5.7.1 release notes", "v5.8.0 release notes", "v5.8.1 release notes", "v5.8.2 release notes", "v5.9.0 release notes", "v5.9.1 release notes", "v5.9.2 release notes", "Releases of Clawpack and release notes", "Checkpointing and restarting", "Riemann solvers", "Shallow water Riemann solvers in Clawpack", "Ruled Rectangles", "Setting sea_level", "Set Eta Init \u2013 spatially varying initial surface elevation", "setaux default routines", "Set environment variables", "Using setplot.py to specify the desired plots", "Specifying classic run-time parameters in setrun.py", "Specifying AMRClaw run-time parameters in setrun.py", "Sample setrun.py module for AMRClaw", "Specifying GeoClaw parameters in setrun.py", "Sample setrun.py module for classic Clawpack", "Saving and sharing results", "Source terms for shallow water on the sphere", "Compiling the Sphinx documentation locally", "src1d default routines", "src default routines", "Storm Specification Class and Tools", "Sources for Storm Surge Data", "Testing your installation", "Timing Statistics", "Topography data", "Python tools for working with topo and dtopo", "topotools module for working with topography data", "Troubleshooting", "Some sources of tsunami data", "User files required for the Fortran code", "Plotting with VisIt", "Clawpack Virtual Machine", "Wave-propagation algorithms"], "terms": {"For": [0, 1, 2, 3, 5, 7, 8, 9, 10, 12, 13, 16, 17, 18, 19, 21, 24, 26, 27, 28, 29, 30, 31, 32, 34, 36, 38, 40, 41, 42, 44, 45, 47, 49, 51, 52, 53, 55, 57, 58, 59, 66, 67, 70, 71, 72, 75, 76, 77, 81, 82, 84, 85, 88, 89, 93, 94, 96, 97, 98, 99, 101, 104, 105, 109, 110, 111, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 138, 140, 141, 142, 143, 144, 147, 148, 149, 150, 151, 152, 155, 158, 159, 161, 162, 164, 166, 167, 170], "usag": [0, 1, 2, 3, 13, 19, 48, 49, 51, 55, 60, 97, 127, 158, 164], "see": [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 12, 13, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 30, 31, 32, 34, 36, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 55, 56, 57, 58, 59, 60, 61, 62, 64, 65, 66, 67, 68, 70, 71, 72, 74, 75, 76, 77, 80, 81, 82, 83, 84, 85, 86, 89, 91, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 146, 147, 148, 149, 150, 151, 153, 155, 156, 157, 158, 160, 161, 162, 164, 165, 166, 167, 168, 169, 170], "us": [0, 1, 2, 3, 4, 6, 7, 8, 9, 10, 11, 12, 14, 16, 17, 21, 22, 23, 24, 25, 26, 28, 29, 30, 32, 34, 35, 37, 38, 39, 40, 42, 43, 44, 45, 47, 48, 49, 50, 51, 53, 54, 55, 57, 58, 59, 60, 61, 63, 65, 66, 68, 70, 72, 74, 75, 77, 80, 81, 82, 83, 84, 85, 86, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 99, 100, 102, 103, 105, 106, 108, 109, 110, 111, 112, 113, 115, 116, 118, 120, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 135, 136, 137, 138, 139, 142, 143, 146, 148, 149, 150, 151, 152, 154, 156, 157, 158, 161, 162, 164, 166, 168, 169, 170], "setplot": [0, 1, 2, 3, 7, 21, 22, 24, 27, 45, 47, 48, 49, 80, 81, 100, 101, 109, 118, 125, 135, 136, 165, 168], "py": [0, 1, 2, 3, 5, 6, 7, 8, 11, 13, 14, 16, 21, 22, 27, 30, 32, 34, 35, 37, 38, 39, 40, 41, 42, 43, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 58, 59, 63, 64, 66, 68, 70, 75, 77, 78, 80, 81, 83, 84, 89, 93, 96, 99, 100, 101, 105, 113, 115, 116, 118, 119, 120, 121, 122, 123, 124, 125, 127, 128, 129, 130, 131, 132, 135, 136, 137, 139, 140, 141, 143, 144, 146, 154, 158, 162, 164, 165, 167, 168], "specifi": [0, 1, 2, 3, 4, 5, 6, 7, 15, 16, 18, 19, 22, 24, 27, 29, 30, 31, 32, 34, 35, 36, 37, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 54, 55, 57, 63, 66, 67, 68, 70, 71, 72, 75, 76, 77, 78, 80, 81, 83, 88, 91, 94, 97, 98, 101, 103, 104, 107, 109, 111, 112, 113, 116, 119, 122, 123, 124, 125, 126, 127, 130, 132, 135, 136, 137, 139, 140, 142, 143, 144, 145, 150, 152, 153, 156, 157, 158, 159, 161, 162, 164, 165, 166, 168, 170], "desir": [0, 1, 2, 3, 6, 7, 16, 19, 24, 27, 28, 32, 34, 35, 36, 37, 42, 45, 47, 49, 59, 62, 63, 64, 70, 72, 75, 77, 80, 81, 82, 84, 88, 89, 91, 98, 103, 104, 112, 125, 127, 130, 144, 146, 148, 149, 150, 151, 152, 158, 162, 164, 165], "exampl": [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 13, 14, 16, 18, 22, 24, 26, 29, 30, 31, 32, 37, 41, 43, 44, 46, 48, 49, 51, 57, 58, 59, 60, 61, 63, 64, 66, 67, 68, 72, 75, 76, 77, 81, 82, 84, 86, 87, 88, 89, 91, 94, 95, 97, 98, 101, 102, 103, 104, 105, 108, 109, 110, 111, 113, 114, 115, 116, 118, 119, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 135, 136, 137, 139, 140, 141, 143, 144, 146, 147, 148, 149, 150, 151, 152, 153, 154, 158, 160, 161, 162, 164, 165, 166, 167], "object": [0, 1, 2, 3, 5, 18, 24, 29, 32, 34, 36, 37, 41, 47, 55, 63, 70, 75, 81, 82, 84, 88, 89, 91, 97, 98, 99, 101, 103, 106, 107, 108, 109, 119, 128, 136, 137, 139, 140, 148, 149, 150, 151, 152, 158, 164], "thi": [0, 1, 2, 3, 5, 6, 8, 10, 11, 12, 13, 14, 16, 17, 18, 19, 20, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 54, 55, 56, 57, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 70, 71, 72, 73, 75, 76, 77, 81, 82, 84, 85, 86, 88, 89, 91, 92, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 113, 114, 115, 116, 118, 119, 120, 122, 123, 124, 125, 126, 127, 128, 129, 130, 132, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 158, 159, 160, 161, 162, 164, 165, 166, 167, 168, 169, 170], "class": [0, 1, 2, 3, 5, 27, 32, 34, 35, 36, 37, 41, 55, 63, 75, 82, 84, 89, 94, 96, 101, 103, 104, 106, 108, 109, 110, 128, 130, 139, 142, 147, 148, 149, 150, 151, 152, 164], "ar": [0, 1, 2, 3, 4, 5, 6, 7, 9, 10, 12, 13, 15, 16, 18, 19, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 52, 53, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 70, 71, 75, 76, 77, 78, 81, 83, 84, 85, 86, 88, 89, 91, 92, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 119, 120, 121, 122, 123, 124, 125, 126, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 147, 148, 149, 150, 151, 152, 154, 155, 156, 157, 158, 159, 160, 161, 162, 164, 165, 167, 170], "usual": [0, 2, 3, 5, 6, 19, 32, 36, 42, 47, 50, 55, 63, 66, 75, 77, 93, 94, 99, 101, 102, 104, 109, 113, 115, 125, 140, 148, 149, 150, 151, 152, 165, 167], "creat": [0, 1, 2, 3, 5, 6, 7, 21, 26, 27, 30, 32, 34, 35, 36, 37, 38, 39, 41, 43, 45, 47, 48, 49, 50, 54, 56, 58, 62, 63, 66, 75, 77, 81, 82, 84, 89, 90, 93, 94, 96, 97, 100, 103, 106, 107, 108, 109, 115, 116, 118, 119, 123, 124, 125, 127, 128, 129, 132, 135, 142, 147, 148, 149, 150, 153, 155, 158, 164, 166, 167, 168], "new_plotax": [0, 2, 47, 55, 82, 147], "clawplotfigur": [0, 1, 55, 82, 136, 147], "The": [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 20, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 32, 34, 36, 37, 38, 39, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 56, 57, 58, 59, 61, 62, 63, 64, 65, 66, 67, 68, 72, 74, 75, 76, 77, 78, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 91, 92, 94, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 109, 110, 111, 113, 115, 116, 118, 119, 120, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 160, 161, 162, 164, 165, 166, 167, 168, 169, 170], "follow": [0, 2, 3, 4, 5, 6, 13, 16, 18, 19, 20, 21, 25, 26, 30, 32, 34, 38, 39, 40, 42, 47, 50, 55, 57, 58, 59, 60, 62, 65, 70, 71, 75, 77, 82, 83, 85, 86, 88, 89, 90, 93, 94, 97, 98, 99, 101, 102, 103, 105, 106, 108, 109, 111, 116, 118, 127, 132, 135, 136, 137, 139, 140, 142, 146, 147, 148, 149, 151, 158, 160, 161, 162, 165, 167, 169], "can": [0, 2, 3, 4, 5, 6, 7, 8, 9, 11, 12, 13, 14, 15, 16, 18, 19, 21, 22, 24, 26, 28, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 66, 67, 68, 70, 71, 72, 74, 75, 76, 77, 78, 80, 81, 82, 83, 84, 86, 88, 89, 90, 92, 93, 94, 96, 97, 98, 99, 100, 101, 103, 104, 105, 106, 107, 108, 109, 111, 112, 113, 115, 116, 118, 119, 120, 123, 124, 125, 126, 127, 130, 131, 132, 135, 137, 138, 139, 140, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 156, 157, 158, 160, 162, 164, 165, 166, 167, 168, 170], "set": [0, 1, 2, 3, 5, 6, 8, 13, 14, 15, 16, 18, 19, 24, 27, 29, 30, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 51, 52, 53, 54, 55, 58, 59, 61, 62, 63, 64, 66, 67, 70, 72, 74, 75, 76, 77, 78, 80, 81, 88, 89, 91, 93, 94, 95, 96, 97, 98, 99, 102, 103, 104, 105, 106, 107, 108, 109, 111, 112, 115, 116, 118, 119, 120, 123, 124, 125, 127, 129, 130, 132, 135, 136, 137, 139, 140, 141, 142, 145, 147, 148, 149, 150, 151, 152, 153, 154, 158, 159, 162, 164, 166, 167, 170], "user": [0, 2, 3, 4, 5, 6, 12, 13, 21, 22, 24, 25, 27, 28, 29, 30, 31, 34, 36, 37, 44, 49, 52, 55, 60, 62, 63, 68, 71, 75, 77, 82, 89, 90, 93, 97, 99, 107, 109, 110, 111, 115, 123, 125, 127, 129, 136, 137, 140, 148, 150, 151, 152, 155, 164, 170], "name": [0, 1, 2, 3, 5, 7, 11, 12, 13, 18, 19, 22, 24, 30, 31, 32, 35, 36, 37, 38, 39, 41, 42, 43, 47, 49, 55, 58, 59, 63, 65, 71, 82, 84, 86, 89, 91, 93, 94, 97, 98, 102, 103, 108, 109, 111, 118, 124, 127, 132, 139, 140, 142, 147, 148, 149, 150, 151, 152, 158, 164, 167, 168], "str": [0, 1, 3, 32, 63, 97, 148, 149, 158, 164], "axescmd": [0, 84], "command": [0, 1, 2, 3, 11, 13, 14, 19, 30, 43, 54, 55, 56, 59, 61, 62, 66, 74, 81, 82, 85, 88, 89, 91, 96, 99, 100, 104, 108, 109, 110, 111, 116, 136, 140, 146, 147, 148, 149, 162, 164], "ax": [0, 1, 2, 29, 32, 47, 55, 63, 71, 81, 82, 84, 147, 164], "subplot": [0, 32, 70, 84, 142], "1": [0, 2, 3, 4, 5, 6, 7, 8, 9, 13, 14, 15, 16, 17, 18, 19, 24, 32, 34, 35, 36, 38, 39, 40, 41, 47, 48, 49, 51, 52, 53, 55, 57, 58, 59, 62, 63, 64, 66, 71, 75, 77, 82, 84, 88, 89, 91, 92, 93, 94, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 115, 120, 122, 123, 125, 127, 128, 130, 132, 134, 138, 139, 140, 141, 142, 143, 145, 147, 148, 149, 150, 151, 152, 154, 158, 161, 162, 164, 165, 166, 167, 170], "singl": [0, 1, 2, 3, 5, 6, 16, 21, 24, 25, 29, 30, 32, 34, 36, 37, 42, 47, 49, 50, 55, 57, 58, 59, 63, 64, 66, 71, 75, 76, 77, 78, 88, 94, 97, 98, 103, 109, 116, 122, 123, 125, 138, 140, 144, 148, 149, 150, 151, 162, 164, 166, 167], "fill": [0, 3, 4, 6, 16, 26, 55, 70, 94, 97, 106, 113, 125, 144, 148, 158, 161, 164, 167], "figur": [0, 1, 2, 4, 13, 32, 38, 39, 42, 45, 47, 57, 63, 70, 71, 81, 84, 103, 111, 118, 135, 140, 142, 147, 164], "2": [0, 3, 4, 6, 7, 15, 16, 17, 18, 19, 24, 32, 34, 35, 36, 37, 41, 42, 47, 49, 51, 55, 57, 59, 61, 62, 63, 64, 68, 70, 71, 72, 75, 76, 77, 82, 84, 85, 88, 89, 91, 92, 94, 97, 98, 99, 101, 102, 103, 104, 105, 106, 108, 109, 111, 115, 116, 118, 119, 123, 124, 125, 127, 128, 129, 130, 131, 132, 133, 135, 136, 138, 139, 140, 142, 145, 148, 149, 150, 151, 152, 154, 158, 161, 162, 164, 167, 170], "top": [0, 1, 3, 11, 25, 31, 32, 36, 55, 58, 59, 61, 62, 75, 82, 96, 101, 102, 111, 116, 139, 146], "half": [0, 16, 17, 75, 77, 104, 135, 148, 167], "0": [0, 2, 3, 5, 6, 16, 18, 19, 21, 27, 29, 30, 32, 34, 36, 37, 41, 42, 47, 48, 49, 51, 52, 55, 56, 57, 58, 59, 63, 64, 66, 67, 68, 70, 71, 72, 75, 77, 82, 84, 85, 88, 89, 91, 92, 94, 97, 98, 99, 101, 102, 103, 104, 105, 106, 108, 109, 110, 111, 115, 121, 122, 124, 126, 129, 131, 133, 136, 138, 139, 141, 142, 143, 144, 148, 149, 150, 151, 152, 154, 161, 162, 164, 166, 167, 169, 170], "8": [0, 34, 36, 42, 47, 55, 58, 63, 70, 77, 82, 94, 107, 109, 117, 118, 129, 135, 138, 140, 142, 147, 148, 149, 151, 152], "tall": 0, "skinni": 0, "axi": [0, 32, 42, 49, 53, 55, 70, 71, 82, 94, 136, 142], "matplotlib": [0, 2, 3, 13, 32, 42, 53, 55, 70, 81, 82, 85, 87, 90, 110, 131, 141, 147, 164, 165], "document": [0, 1, 2, 3, 6, 7, 19, 20, 23, 24, 25, 26, 27, 30, 31, 34, 48, 52, 57, 62, 65, 75, 81, 82, 83, 84, 86, 92, 94, 97, 98, 99, 100, 104, 106, 109, 111, 118, 120, 133, 134, 135, 136, 137, 138, 147, 150, 154, 168, 169], "show": [0, 2, 3, 9, 10, 12, 14, 30, 32, 38, 39, 42, 46, 47, 55, 58, 59, 63, 66, 70, 71, 84, 94, 104, 108, 111, 116, 118, 123, 133, 134, 135, 142, 164, 165, 167], "bool": [0, 1, 2, 3, 51, 63, 91, 97, 102, 103, 104, 106, 109, 151, 158, 164], "If": [0, 1, 2, 3, 4, 5, 6, 12, 13, 15, 16, 18, 19, 20, 21, 22, 24, 25, 26, 27, 29, 30, 31, 32, 34, 36, 37, 38, 39, 40, 42, 43, 44, 47, 49, 51, 55, 57, 58, 59, 60, 61, 62, 63, 64, 66, 67, 68, 70, 71, 72, 75, 76, 77, 78, 80, 81, 82, 84, 85, 86, 88, 93, 94, 96, 97, 98, 99, 101, 103, 104, 105, 106, 107, 109, 111, 113, 114, 115, 116, 118, 125, 126, 127, 128, 129, 130, 132, 135, 136, 137, 139, 140, 141, 142, 143, 144, 145, 146, 148, 149, 150, 151, 152, 156, 157, 158, 160, 162, 164, 165, 167, 170], "fals": [0, 1, 2, 3, 5, 32, 37, 42, 52, 53, 54, 55, 63, 70, 77, 91, 94, 97, 102, 103, 104, 106, 109, 124, 125, 130, 135, 139, 141, 148, 149, 150, 151, 152, 158, 164], "suppress": [0, 2, 3, 30, 55, 63, 124, 126, 148, 149], "all": [0, 1, 4, 6, 11, 12, 13, 16, 19, 22, 24, 25, 27, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 42, 43, 44, 47, 48, 51, 52, 54, 55, 57, 58, 59, 60, 61, 63, 64, 65, 66, 67, 71, 72, 74, 75, 76, 77, 78, 81, 82, 84, 85, 86, 88, 91, 92, 94, 96, 97, 98, 99, 101, 102, 103, 104, 106, 109, 110, 111, 114, 115, 116, 118, 119, 120, 123, 124, 125, 127, 130, 132, 138, 139, 140, 141, 142, 144, 147, 148, 149, 150, 151, 152, 153, 159, 160, 161, 162, 164, 165, 167], "item": [0, 1, 3, 71, 81, 84, 109, 132, 137, 147], "titl": [0, 1, 4, 17, 26, 42, 47, 55, 63, 70, 81, 96, 125, 136, 142, 164], "appear": [0, 1, 3, 5, 8, 13, 20, 25, 30, 34, 36, 47, 48, 49, 55, 58, 63, 66, 69, 82, 98, 103, 106, 118, 125, 132, 135, 136, 137, 151, 153, 162], "default": [0, 1, 2, 3, 13, 18, 19, 24, 30, 32, 34, 36, 37, 44, 47, 48, 51, 53, 54, 55, 57, 62, 63, 64, 66, 67, 71, 72, 75, 76, 77, 82, 84, 88, 91, 93, 94, 97, 98, 99, 100, 103, 104, 106, 107, 109, 115, 118, 119, 125, 129, 130, 132, 135, 136, 137, 139, 143, 149, 150, 151, 154, 158, 162, 164, 167], "string": [0, 1, 3, 7, 32, 34, 37, 47, 49, 51, 55, 57, 63, 64, 82, 89, 91, 92, 94, 97, 98, 103, 109, 111, 118, 136, 148, 151, 158, 164], "new": [0, 1, 2, 4, 5, 6, 8, 12, 13, 19, 20, 22, 24, 26, 27, 30, 31, 32, 34, 35, 36, 37, 41, 42, 43, 44, 47, 48, 51, 55, 56, 57, 59, 62, 63, 64, 66, 67, 68, 70, 71, 76, 77, 82, 84, 87, 88, 89, 90, 91, 97, 99, 101, 104, 106, 113, 115, 118, 119, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 135, 136, 137, 139, 140, 142, 143, 144, 146, 148, 149, 151, 158, 162, 164, 167], "v5": [0, 5, 14, 30, 31, 34, 36, 41, 45, 47, 56, 58, 59, 61, 62, 67, 77, 103, 110, 111, 115, 138, 139, 143, 144, 149, 151, 154], "9": [0, 34, 36, 37, 42, 47, 55, 59, 61, 62, 63, 64, 77, 82, 94, 97, 103, 118, 125, 128, 129, 130, 131, 132, 133, 134, 138, 139, 142, 148, 151, 152, 154], "note": [0, 1, 3, 4, 5, 13, 15, 16, 19, 22, 24, 26, 27, 30, 32, 34, 35, 36, 37, 41, 42, 43, 44, 47, 49, 51, 55, 56, 57, 58, 59, 60, 61, 62, 63, 66, 67, 70, 75, 76, 82, 84, 89, 92, 93, 94, 96, 97, 99, 101, 102, 105, 106, 109, 110, 112, 115, 139, 140, 142, 143, 144, 145, 147, 148, 149, 150, 151, 152, 156, 157, 158, 159, 161, 162, 164, 166, 167], "now": [0, 5, 6, 7, 13, 20, 22, 24, 26, 28, 30, 31, 32, 34, 35, 36, 37, 41, 42, 44, 54, 57, 58, 59, 68, 70, 72, 75, 77, 82, 88, 89, 94, 96, 97, 98, 99, 100, 101, 103, 104, 105, 108, 113, 115, 116, 118, 119, 120, 123, 124, 125, 126, 127, 129, 130, 132, 133, 135, 136, 137, 143, 147, 149, 153, 162, 169], "includ": [0, 2, 4, 6, 13, 18, 19, 20, 23, 24, 25, 29, 30, 31, 32, 34, 36, 37, 38, 39, 41, 43, 44, 46, 47, 49, 52, 55, 57, 59, 61, 62, 63, 65, 67, 68, 70, 71, 72, 75, 76, 78, 81, 82, 84, 86, 88, 89, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 108, 111, 113, 115, 116, 118, 119, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 140, 141, 142, 146, 148, 150, 151, 153, 154, 155, 158, 159, 161, 162, 164, 167], "h": [0, 16, 17, 18, 19, 34, 36, 37, 42, 47, 48, 49, 52, 55, 56, 63, 68, 72, 102, 115, 123, 130, 136, 141, 143, 144, 151, 162], "m": [0, 4, 17, 18, 22, 24, 30, 32, 47, 48, 51, 55, 56, 58, 59, 63, 70, 71, 75, 77, 89, 115, 122, 136, 140, 142, 151, 164, 167, 170], "": [0, 1, 3, 4, 6, 13, 17, 22, 27, 30, 31, 32, 34, 36, 37, 38, 40, 41, 42, 47, 51, 55, 56, 58, 59, 62, 63, 64, 66, 70, 75, 76, 78, 81, 84, 87, 89, 91, 92, 94, 95, 96, 97, 99, 100, 101, 102, 103, 106, 108, 110, 113, 115, 116, 124, 136, 140, 142, 147, 148, 149, 151, 158, 161, 164, 165, 166, 167], "d": [0, 4, 7, 17, 30, 32, 51, 55, 58, 63, 93, 102, 111, 116, 118, 136, 140], "describ": [0, 3, 4, 5, 6, 7, 13, 14, 16, 18, 19, 21, 28, 30, 32, 33, 34, 36, 38, 39, 41, 42, 47, 49, 50, 51, 52, 55, 56, 58, 59, 61, 63, 64, 66, 67, 70, 71, 75, 77, 78, 81, 82, 83, 94, 96, 97, 103, 109, 113, 115, 116, 118, 125, 128, 129, 135, 140, 142, 143, 147, 148, 149, 151, 158, 159, 162, 164, 166, 167, 170], "further": [0, 6, 16, 19, 27, 34, 36, 44, 52, 63, 66, 71, 96, 110, 115, 116, 135, 136, 149], "below": [0, 3, 6, 13, 15, 16, 18, 19, 20, 24, 26, 30, 31, 32, 34, 36, 42, 47, 48, 49, 55, 56, 58, 59, 62, 63, 68, 71, 75, 84, 86, 88, 90, 98, 102, 108, 111, 112, 115, 116, 118, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 140, 142, 145, 146, 147, 148, 149, 150, 151, 152, 156, 157, 158, 162, 164, 167], "case": [0, 5, 6, 8, 13, 16, 19, 21, 24, 32, 34, 36, 41, 44, 47, 48, 49, 52, 55, 62, 63, 67, 70, 71, 72, 75, 77, 82, 88, 94, 97, 99, 101, 103, 109, 111, 115, 116, 118, 120, 123, 124, 125, 126, 127, 132, 135, 136, 139, 142, 143, 149, 151, 158, 162, 164, 165, 167, 170], "title_with_t": [0, 82], "true": [0, 1, 2, 3, 5, 6, 15, 16, 29, 32, 35, 37, 42, 47, 51, 54, 55, 58, 63, 70, 77, 81, 88, 91, 94, 97, 98, 99, 103, 104, 106, 115, 118, 125, 136, 139, 140, 142, 144, 145, 148, 149, 150, 151, 152, 158, 164], "title_fonts": [0, 136], "float": [0, 3, 32, 34, 37, 47, 51, 63, 91, 94, 97, 102, 106, 109, 148, 149, 151, 152, 158, 164], "fontsiz": [0, 82], "title_kwarg": [0, 136], "ani": [0, 3, 4, 5, 6, 8, 13, 16, 18, 19, 20, 21, 22, 24, 29, 30, 31, 34, 36, 37, 38, 39, 40, 47, 48, 49, 52, 54, 55, 58, 59, 61, 62, 64, 65, 66, 68, 70, 71, 72, 74, 76, 77, 78, 82, 86, 92, 93, 94, 96, 97, 98, 99, 101, 103, 105, 109, 111, 114, 115, 116, 118, 123, 127, 129, 135, 136, 137, 139, 142, 143, 144, 147, 148, 149, 151, 158, 167, 170], "other": [0, 3, 4, 5, 6, 7, 9, 12, 13, 16, 19, 22, 24, 29, 30, 32, 35, 36, 37, 38, 39, 41, 47, 48, 49, 50, 52, 55, 56, 57, 59, 60, 61, 62, 65, 66, 68, 70, 71, 72, 75, 76, 77, 81, 84, 86, 88, 89, 91, 94, 96, 97, 98, 100, 101, 102, 105, 108, 110, 111, 115, 116, 119, 120, 122, 123, 125, 140, 143, 146, 147, 148, 151, 153, 158, 162, 164, 166, 167, 168], "kwarg": [0, 2, 3, 32, 63, 82, 109, 116, 118, 136, 147, 158], "pass": [0, 3, 16, 21, 22, 30, 32, 37, 47, 49, 55, 63, 76, 82, 88, 91, 93, 95, 101, 104, 106, 107, 109, 116, 135, 140, 150, 158, 164, 167], "plt": [0, 63, 141], "e": [0, 1, 3, 5, 8, 12, 13, 14, 16, 22, 24, 29, 30, 31, 32, 34, 36, 37, 44, 47, 49, 50, 51, 54, 55, 57, 58, 59, 60, 61, 62, 63, 64, 66, 67, 68, 70, 71, 74, 75, 76, 77, 78, 81, 84, 85, 89, 94, 96, 97, 99, 100, 101, 102, 103, 104, 107, 109, 110, 111, 115, 116, 118, 123, 124, 125, 126, 127, 135, 136, 137, 140, 142, 143, 144, 146, 147, 148, 149, 150, 151, 152, 158, 162, 164, 165, 166, 167, 170], "g": [0, 1, 3, 4, 5, 8, 12, 13, 14, 16, 17, 22, 24, 29, 30, 31, 32, 34, 36, 37, 44, 47, 49, 50, 54, 55, 58, 59, 60, 61, 62, 63, 64, 66, 68, 70, 71, 74, 75, 76, 77, 78, 81, 84, 85, 96, 99, 100, 101, 102, 103, 104, 110, 111, 115, 116, 118, 123, 124, 125, 126, 127, 135, 136, 137, 140, 142, 143, 146, 147, 148, 149, 150, 151, 152, 162, 164, 165, 167, 170], "color": [0, 2, 3, 32, 42, 55, 63, 70, 71, 81, 136, 142, 147, 164], "format": [0, 1, 3, 5, 13, 14, 27, 32, 35, 38, 39, 42, 47, 48, 50, 52, 53, 55, 57, 63, 64, 66, 70, 71, 73, 75, 81, 82, 88, 91, 97, 98, 100, 101, 103, 109, 113, 124, 125, 127, 130, 132, 135, 136, 148, 151, 158, 159, 164, 166, 168], "like": [0, 12, 13, 18, 26, 30, 31, 42, 44, 55, 58, 59, 63, 64, 71, 84, 89, 91, 94, 97, 98, 99, 102, 103, 104, 106, 110, 111, 116, 124, 140, 142, 147, 161, 162, 165], "time": [0, 1, 5, 6, 7, 10, 14, 16, 18, 19, 22, 24, 27, 29, 30, 32, 34, 36, 37, 38, 39, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 55, 57, 58, 63, 64, 71, 72, 75, 76, 77, 78, 82, 86, 88, 91, 92, 96, 97, 98, 104, 106, 108, 115, 116, 118, 119, 122, 124, 125, 127, 128, 129, 132, 135, 136, 137, 139, 140, 142, 144, 146, 147, 150, 152, 158, 162, 165, 166, 170], "t": [0, 1, 4, 5, 12, 13, 17, 19, 26, 29, 30, 31, 32, 34, 36, 37, 42, 47, 49, 58, 59, 62, 64, 66, 67, 70, 71, 75, 76, 77, 82, 84, 88, 89, 92, 93, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 108, 110, 116, 122, 131, 135, 136, 142, 148, 150, 152, 158, 162, 164, 165, 167, 168, 170], "14": [0, 34, 55, 75, 82, 134, 135, 138, 142], "8e": [0, 82], "And": [0, 6, 19, 22, 58, 61], "rather": [0, 5, 6, 18, 22, 24, 30, 31, 34, 36, 37, 42, 58, 59, 62, 66, 67, 68, 74, 75, 94, 99, 101, 104, 111, 112, 115, 118, 123, 124, 125, 127, 129, 130, 132, 135, 136, 138, 139, 142, 147, 148, 149, 158, 159, 162, 164, 167, 170], "than": [0, 3, 5, 6, 13, 16, 18, 19, 22, 24, 30, 31, 32, 34, 36, 37, 42, 47, 49, 55, 58, 59, 62, 63, 64, 66, 67, 68, 70, 72, 74, 75, 77, 81, 84, 88, 89, 91, 94, 97, 98, 99, 101, 102, 104, 109, 111, 115, 116, 118, 119, 122, 123, 124, 125, 126, 127, 129, 130, 132, 135, 136, 138, 139, 142, 143, 144, 147, 148, 149, 151, 158, 159, 161, 162, 164, 167, 170], "8f": [0, 82], "001": [0, 36, 82, 92], "1000": [0, 57, 71, 82, 162], "A": [0, 2, 3, 4, 5, 6, 7, 11, 17, 18, 21, 22, 24, 31, 32, 37, 38, 39, 45, 48, 49, 51, 55, 58, 59, 63, 64, 65, 66, 68, 71, 75, 84, 86, 88, 89, 93, 94, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 108, 115, 116, 119, 125, 127, 128, 129, 130, 132, 135, 136, 140, 141, 148, 151, 158, 164, 170], "differ": [0, 1, 3, 6, 7, 12, 15, 16, 18, 19, 24, 30, 31, 32, 33, 36, 37, 38, 39, 42, 47, 49, 50, 52, 54, 57, 61, 63, 66, 68, 70, 71, 75, 76, 81, 84, 88, 89, 91, 93, 94, 96, 97, 102, 104, 109, 110, 111, 112, 115, 116, 123, 124, 125, 126, 127, 130, 132, 133, 140, 143, 144, 145, 146, 148, 149, 150, 151, 156, 157, 162, 164, 165, 166, 167, 170], "title_t_format": [0, 136], "contain": [0, 1, 3, 5, 12, 13, 18, 19, 22, 25, 27, 28, 32, 34, 35, 36, 37, 38, 39, 40, 43, 45, 46, 47, 48, 49, 51, 53, 54, 55, 56, 57, 58, 59, 63, 64, 66, 67, 70, 71, 77, 78, 82, 84, 85, 88, 89, 91, 92, 94, 96, 97, 99, 101, 102, 103, 104, 106, 108, 109, 110, 111, 115, 116, 119, 120, 127, 128, 138, 140, 142, 147, 148, 151, 153, 158, 162, 164, 165, 167], "i": [0, 1, 2, 3, 4, 5, 6, 7, 8, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 46, 47, 48, 49, 50, 51, 52, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 70, 71, 72, 73, 74, 75, 76, 77, 81, 82, 83, 84, 85, 86, 88, 89, 90, 91, 92, 94, 95, 96, 97, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 122, 123, 124, 125, 126, 127, 128, 129, 130, 132, 134, 135, 136, 137, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 154, 155, 156, 157, 158, 159, 160, 161, 162, 164, 165, 166, 167, 168, 169, 170], "dai": [0, 6, 13, 55, 136, 151], "hour": [0, 13, 36, 55, 63, 136], "minut": [0, 36, 42, 51, 55, 58, 63, 136, 143, 164, 166], "second": [0, 3, 16, 18, 19, 32, 34, 39, 47, 49, 51, 55, 63, 71, 88, 94, 98, 104, 115, 119, 125, 136, 139, 148, 151, 158, 160, 161, 164, 167, 170], "otherwis": [0, 5, 32, 58, 62, 65, 70, 86, 98, 102, 103, 104, 105, 106, 109, 115, 136, 137, 148, 154, 164], "you": [0, 2, 3, 4, 5, 12, 13, 14, 15, 16, 18, 19, 20, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 34, 35, 36, 37, 38, 39, 40, 41, 43, 44, 45, 47, 51, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 66, 67, 70, 71, 74, 75, 76, 77, 78, 80, 81, 82, 84, 85, 86, 88, 89, 90, 91, 93, 96, 97, 98, 99, 100, 101, 102, 104, 105, 106, 107, 108, 110, 111, 112, 113, 114, 116, 118, 119, 124, 125, 126, 127, 130, 132, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 149, 150, 151, 152, 153, 155, 156, 157, 158, 160, 162, 165, 166, 167, 169], "could": [0, 5, 12, 13, 29, 34, 37, 38, 39, 42, 47, 57, 58, 64, 70, 72, 75, 76, 77, 82, 84, 88, 94, 98, 106, 107, 111, 123, 132, 142, 144, 149, 150, 151, 152, 164, 167], "plotax": [0, 3, 47, 82, 130, 147], "surfac": [0, 17, 24, 27, 32, 34, 36, 37, 42, 47, 48, 50, 52, 55, 72, 75, 81, 83, 89, 96, 108, 112, 115, 123, 142, 143, 151, 162], "elev": [0, 24, 27, 34, 42, 48, 50, 52, 55, 57, 63, 72, 81, 112, 115, 130, 142, 143, 151, 162, 164, 166], "after": [0, 1, 3, 5, 6, 12, 13, 21, 25, 29, 30, 31, 34, 35, 36, 38, 39, 42, 47, 49, 52, 58, 59, 61, 63, 64, 66, 67, 70, 71, 77, 82, 89, 90, 91, 93, 98, 104, 106, 111, 115, 116, 118, 119, 123, 124, 136, 141, 144, 148, 149, 150, 152, 158, 167], "earthquak": [0, 19, 27, 32, 48, 49, 52, 114, 144, 151, 159, 162], "none": [0, 1, 2, 3, 16, 26, 29, 32, 35, 37, 42, 47, 51, 55, 63, 70, 77, 91, 94, 97, 98, 103, 104, 106, 109, 116, 118, 119, 125, 127, 128, 129, 130, 131, 134, 135, 136, 139, 148, 150, 152, 158, 164], "instead": [0, 2, 3, 13, 19, 34, 38, 39, 42, 44, 47, 49, 56, 58, 59, 62, 66, 67, 105, 106, 109, 111, 124, 125, 128, 132, 135, 139, 140, 141, 142, 151, 162, 164], "convent": [0, 3, 24, 32, 50, 57, 75, 102, 162], "mention": [0, 19, 96, 148, 149], "abov": [0, 3, 5, 13, 14, 16, 19, 22, 30, 34, 36, 38, 39, 41, 42, 43, 44, 47, 49, 52, 55, 57, 58, 59, 62, 65, 67, 70, 72, 75, 77, 82, 85, 86, 89, 98, 100, 105, 108, 109, 115, 118, 125, 127, 132, 135, 140, 142, 144, 146, 147, 148, 150, 151, 152, 158, 161, 162, 164, 167], "intern": [0, 6, 32, 47, 57, 63, 75, 125, 149, 162, 164, 170], "t_str": 0, "title_str": 0, "xlimit": [0, 47, 55, 130], "arrai": [0, 3, 6, 15, 19, 22, 24, 29, 32, 34, 35, 37, 41, 47, 48, 51, 53, 57, 63, 82, 88, 89, 91, 92, 94, 96, 97, 98, 101, 102, 103, 104, 106, 108, 109, 110, 119, 120, 121, 125, 127, 130, 132, 136, 140, 141, 142, 145, 148, 149, 150, 151, 152, 158, 162, 164, 167], "xmin": [0, 37], "xmax": [0, 37], "auto": [0, 47, 89], "x": [0, 2, 3, 5, 8, 13, 16, 19, 22, 25, 27, 29, 30, 31, 32, 34, 35, 36, 37, 41, 42, 45, 47, 48, 49, 50, 51, 55, 56, 57, 58, 59, 63, 70, 71, 72, 75, 77, 81, 82, 85, 88, 91, 92, 94, 95, 96, 98, 99, 101, 102, 103, 106, 107, 108, 110, 115, 116, 118, 130, 136, 140, 141, 142, 144, 148, 149, 150, 151, 162, 164, 167, 170], "limit": [0, 4, 6, 12, 27, 32, 35, 41, 52, 55, 63, 65, 71, 76, 81, 86, 88, 89, 94, 96, 104, 115, 121, 142, 148, 149, 150, 152, 162, 164, 170], "an": [0, 1, 2, 3, 4, 5, 6, 9, 11, 12, 16, 17, 18, 19, 22, 24, 26, 27, 29, 30, 31, 32, 34, 35, 36, 37, 41, 42, 43, 44, 47, 48, 49, 51, 52, 54, 59, 60, 61, 62, 63, 67, 68, 71, 72, 75, 76, 77, 81, 82, 84, 86, 88, 89, 90, 91, 94, 95, 96, 97, 98, 100, 101, 102, 103, 104, 105, 107, 108, 109, 111, 113, 116, 117, 119, 121, 123, 124, 125, 127, 128, 129, 130, 132, 133, 135, 136, 137, 139, 140, 141, 142, 144, 147, 148, 149, 151, 153, 156, 157, 158, 159, 162, 164, 165, 166, 167], "two": [0, 3, 4, 7, 8, 15, 17, 18, 24, 27, 30, 32, 34, 36, 37, 47, 48, 49, 51, 55, 56, 58, 63, 71, 72, 77, 82, 88, 94, 97, 98, 101, 104, 107, 109, 113, 114, 115, 116, 118, 119, 123, 124, 127, 129, 139, 140, 142, 145, 146, 150, 162, 164, 167, 170], "element": [0, 3, 24, 37, 63, 102, 104, 106, 148, 149, 150, 151], "choos": [0, 7, 60, 62, 63, 75, 101, 118, 148, 151], "automat": [0, 2, 3, 8, 11, 16, 32, 38, 39, 44, 55, 59, 66, 81, 82, 84, 88, 93, 97, 99, 105, 106, 107, 109, 116, 119, 130, 132, 148, 149, 151, 162], "ylimit": [0, 47, 55, 130, 147], "ymin": [0, 37], "ymax": [0, 37], "y": [0, 2, 3, 4, 8, 16, 17, 19, 29, 32, 34, 35, 36, 37, 41, 42, 47, 49, 50, 51, 55, 57, 59, 63, 70, 71, 75, 77, 88, 94, 98, 99, 101, 115, 118, 126, 136, 140, 141, 142, 144, 148, 149, 150, 151, 162, 164], "xticks_fonts": [0, 136], "xtick": [0, 42, 53], "mark": [0, 16, 55, 70, 115, 116], "label": [0, 32, 36, 53, 55, 57, 63, 118, 123, 135, 136, 142, 162, 164], "xticks_kwarg": [0, 136], "dictionari": [0, 1, 2, 3, 32, 37, 47, 64, 82, 88, 91, 97, 102, 103, 106, 108, 111, 158, 162, 164], "locat": [0, 5, 6, 7, 13, 19, 32, 34, 36, 49, 50, 51, 55, 57, 62, 64, 71, 72, 77, 94, 98, 100, 102, 103, 109, 111, 113, 115, 124, 126, 143, 144, 151, 158, 159, 164], "xlabel": [0, 136], "xlabel_fonts": [0, 136], "xlabel_kwarg": [0, 136], "yticks_fonts": [0, 136], "ytick": 0, "yticks_kwarg": [0, 136], "ylabel": [0, 136], "ylabel_fonts": [0, 136], "ylabel_kwarg": [0, 136], "aspect": [0, 12, 26, 31, 46, 52, 53, 71, 136, 164], "ratio": [0, 3, 6, 15, 24, 49, 53, 71, 75, 92, 102, 104, 145, 148, 149, 150], "gca": [0, 42, 53, 70], "set_aspect": [0, 42, 53, 70], "aspect_latitud": [0, 136], "longitud": [0, 32, 34, 37, 50, 51, 57, 63, 70, 75, 81, 123, 142, 151, 158, 164], "latitud": [0, 15, 32, 34, 37, 49, 50, 51, 57, 75, 81, 123, 142, 145, 151, 154, 158, 164], "coordin": [0, 4, 25, 32, 34, 36, 48, 51, 63, 77, 81, 88, 94, 98, 99, 108, 115, 142, 151, 164], "chose": [0, 68, 137], "so": [0, 5, 6, 8, 9, 13, 16, 18, 19, 21, 24, 29, 30, 31, 32, 35, 36, 37, 38, 39, 41, 42, 43, 44, 45, 47, 49, 52, 53, 55, 56, 57, 58, 59, 60, 63, 64, 66, 67, 70, 71, 72, 75, 76, 77, 78, 81, 82, 85, 88, 89, 90, 97, 98, 101, 106, 108, 109, 113, 115, 116, 118, 119, 120, 124, 125, 126, 127, 128, 129, 130, 132, 135, 136, 140, 142, 143, 144, 147, 148, 149, 150, 151, 154, 158, 161, 162, 164, 166, 167, 168], "distanc": [0, 32, 36, 49, 51, 55, 75, 151, 162, 164], "meter": [0, 18, 19, 32, 49, 51, 55, 70, 72, 75, 115, 143, 151, 158, 164, 166], "same": [0, 3, 5, 6, 8, 13, 16, 18, 19, 24, 27, 30, 33, 34, 35, 36, 37, 42, 44, 47, 49, 50, 51, 52, 55, 57, 58, 59, 62, 63, 64, 66, 68, 70, 75, 77, 78, 81, 82, 83, 84, 88, 92, 94, 96, 97, 98, 101, 102, 104, 109, 110, 118, 119, 120, 124, 125, 130, 132, 136, 139, 140, 142, 148, 149, 150, 151, 156, 162, 164, 167], "cover": [0, 6, 7, 29, 30, 32, 34, 36, 37, 41, 42, 55, 63, 70, 75, 115, 120, 125, 144, 150, 162], "broad": [0, 164], "rang": [0, 3, 5, 13, 32, 47, 51, 55, 115, 119, 124, 141, 142], "middl": [0, 102, 124], "most": [0, 3, 19, 22, 24, 29, 31, 34, 36, 38, 39, 43, 44, 47, 49, 52, 54, 55, 56, 57, 58, 61, 63, 66, 70, 71, 76, 77, 78, 81, 82, 84, 86, 94, 98, 99, 104, 107, 108, 110, 115, 116, 118, 124, 126, 132, 135, 137, 138, 139, 140, 141, 142, 143, 147, 148, 149, 151, 154, 155, 167], "interest": [0, 5, 12, 16, 17, 19, 20, 25, 29, 31, 34, 36, 37, 42, 53, 71, 72, 89, 106, 113, 115, 116, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 144, 148, 158], "gener": [0, 1, 2, 3, 4, 5, 6, 7, 9, 11, 13, 14, 16, 17, 18, 19, 21, 22, 26, 27, 30, 31, 34, 36, 41, 42, 43, 44, 47, 48, 49, 52, 55, 57, 59, 61, 64, 66, 67, 68, 72, 75, 76, 77, 81, 82, 83, 84, 86, 89, 90, 92, 94, 99, 100, 101, 103, 104, 105, 108, 109, 111, 113, 115, 119, 123, 125, 136, 139, 142, 143, 146, 148, 149, 153, 159, 161, 162, 167, 168], "appropri": [0, 4, 5, 6, 13, 16, 19, 26, 30, 48, 52, 53, 55, 59, 61, 63, 64, 68, 71, 74, 76, 88, 91, 92, 93, 97, 99, 100, 101, 102, 103, 116, 129, 140, 143, 148, 158, 167, 170], "valu": [0, 3, 5, 6, 7, 16, 18, 19, 22, 24, 29, 32, 35, 36, 37, 38, 39, 41, 42, 44, 47, 48, 49, 51, 53, 54, 55, 57, 63, 64, 66, 68, 70, 71, 72, 75, 76, 77, 82, 89, 94, 96, 97, 98, 101, 102, 103, 104, 106, 108, 109, 115, 116, 119, 120, 122, 123, 125, 127, 129, 130, 132, 135, 139, 140, 142, 143, 144, 148, 149, 150, 151, 152, 154, 158, 159, 162, 164, 165, 167, 170], "np": [0, 32, 41, 88, 94, 98, 101, 141, 150], "co": [0, 26, 32, 37, 42, 51, 53, 59, 70, 88, 101, 144], "pi": [0, 42, 51, 53, 70, 88, 101], "180": [0, 32, 42, 53, 63, 70, 75], "useoffset": [0, 42, 53, 136], "boolean": [0, 3, 55, 70, 97, 102, 148, 149, 151], "tick": [0, 55, 136], "mai": [0, 1, 2, 3, 4, 5, 6, 12, 13, 17, 19, 20, 21, 22, 24, 25, 26, 27, 29, 30, 31, 32, 34, 36, 37, 38, 39, 40, 42, 43, 44, 49, 50, 51, 52, 53, 55, 57, 58, 61, 62, 65, 66, 68, 70, 71, 72, 75, 76, 81, 82, 84, 85, 86, 89, 90, 93, 94, 96, 97, 98, 101, 103, 104, 107, 109, 111, 115, 116, 118, 121, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 142, 143, 144, 146, 147, 148, 149, 150, 151, 158, 159, 160, 162, 164, 165, 167], "offset": [0, 53, 55, 63, 158, 164], "from": [0, 1, 3, 4, 5, 6, 7, 12, 14, 15, 16, 17, 18, 19, 20, 25, 28, 29, 31, 34, 36, 38, 39, 41, 46, 47, 48, 49, 52, 55, 56, 57, 59, 60, 61, 62, 64, 65, 66, 67, 71, 72, 74, 75, 77, 81, 82, 86, 87, 88, 90, 91, 94, 95, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 108, 109, 111, 112, 113, 115, 116, 118, 119, 120, 123, 124, 125, 127, 130, 131, 132, 135, 136, 137, 138, 139, 140, 141, 143, 144, 145, 148, 149, 150, 151, 152, 154, 156, 157, 158, 159, 160, 162, 165, 166, 167, 168], "some": [0, 3, 4, 5, 6, 7, 8, 10, 12, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 27, 29, 30, 32, 34, 36, 37, 38, 39, 42, 44, 47, 48, 49, 50, 52, 53, 55, 56, 57, 58, 59, 62, 67, 70, 75, 76, 77, 81, 83, 84, 86, 89, 90, 92, 96, 97, 98, 100, 101, 103, 105, 106, 107, 108, 110, 111, 113, 114, 115, 116, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 140, 142, 143, 144, 147, 148, 149, 150, 152, 153, 154, 158, 159, 161, 162, 164, 167], "common": [0, 3, 18, 19, 25, 30, 38, 39, 43, 44, 66, 67, 78, 81, 88, 102, 104, 106, 107, 118, 125, 127, 130, 136, 165, 167], "print": [0, 1, 3, 7, 31, 37, 42, 55, 57, 63, 64, 70, 71, 82, 94, 98, 99, 100, 106, 108, 110, 111, 119, 120, 123, 125, 126, 127, 134, 142, 148, 150, 152, 158, 165], "corner": [0, 3, 32, 34, 57, 75, 77, 94, 142, 148, 150, 152, 162, 164], "often": [0, 6, 11, 13, 16, 19, 22, 29, 31, 34, 37, 38, 39, 43, 44, 47, 48, 52, 53, 54, 63, 64, 68, 72, 75, 77, 98, 110, 111, 115, 116, 132, 136, 139, 140, 142, 143, 144, 147, 148, 151, 158, 162, 166, 167, 170], "nicer": [0, 84, 136], "full": [0, 5, 6, 14, 19, 37, 59, 61, 62, 63, 77, 82, 91, 98, 104, 108, 135, 146, 148, 162, 167], "each": [0, 1, 2, 3, 5, 6, 7, 12, 16, 18, 19, 20, 24, 32, 34, 36, 37, 45, 47, 49, 51, 55, 57, 58, 59, 63, 64, 67, 70, 71, 72, 75, 76, 77, 80, 81, 82, 84, 88, 89, 92, 94, 97, 98, 99, 101, 102, 103, 104, 106, 108, 115, 116, 118, 119, 120, 124, 125, 127, 128, 130, 135, 136, 137, 139, 140, 141, 142, 144, 147, 148, 149, 150, 151, 152, 158, 161, 162, 164, 166, 170], "which": [0, 1, 3, 4, 5, 6, 7, 11, 12, 13, 14, 16, 18, 19, 22, 24, 27, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 45, 46, 47, 49, 50, 52, 55, 57, 58, 59, 60, 61, 62, 63, 64, 66, 68, 70, 71, 72, 75, 76, 77, 82, 84, 85, 88, 89, 91, 92, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 107, 108, 109, 110, 113, 115, 116, 118, 119, 120, 123, 125, 127, 128, 130, 132, 135, 136, 137, 139, 140, 141, 142, 143, 144, 148, 149, 150, 151, 154, 158, 159, 162, 164, 166, 167, 169, 170], "should": [0, 1, 2, 3, 4, 5, 6, 12, 13, 14, 16, 19, 20, 21, 22, 24, 25, 27, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 47, 49, 52, 55, 57, 58, 59, 60, 61, 62, 63, 66, 68, 70, 71, 74, 75, 76, 77, 81, 82, 84, 89, 94, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 108, 109, 111, 112, 115, 116, 118, 119, 120, 123, 125, 126, 127, 130, 135, 136, 137, 139, 140, 141, 143, 144, 146, 147, 148, 149, 150, 151, 152, 153, 158, 160, 162, 164, 165, 167, 169, 170], "ticklabel_format": [0, 42, 53], "issu": [0, 19, 24, 26, 28, 58, 59, 62, 71, 88, 93, 94, 96, 104, 105, 107, 116, 118, 119, 124, 125, 126, 127, 140, 151, 165], "grid": [0, 4, 7, 17, 18, 19, 21, 22, 24, 25, 27, 29, 30, 41, 42, 47, 48, 50, 52, 55, 56, 63, 70, 71, 72, 77, 78, 81, 86, 88, 96, 97, 98, 99, 101, 102, 103, 104, 106, 108, 115, 116, 118, 119, 120, 122, 123, 125, 126, 127, 130, 132, 134, 135, 136, 137, 140, 141, 142, 143, 144, 148, 149, 150, 152, 159, 161, 162, 164, 166, 167, 170], "grid_kwarg": [0, 136], "add": [0, 11, 12, 13, 16, 17, 18, 19, 29, 30, 32, 47, 51, 55, 58, 59, 61, 62, 67, 70, 71, 75, 81, 88, 93, 94, 98, 99, 101, 109, 118, 120, 123, 125, 126, 127, 130, 136, 141, 152, 154, 158, 162, 164, 168], "line": [0, 1, 3, 4, 16, 19, 30, 31, 32, 34, 35, 42, 44, 47, 48, 49, 50, 51, 54, 55, 57, 58, 63, 64, 66, 67, 71, 77, 81, 82, 96, 97, 99, 104, 108, 109, 110, 111, 118, 119, 120, 123, 125, 132, 136, 137, 142, 147, 148, 150, 158, 162, 164], "linewidth": [0, 82, 142], "afterax": [0, 29, 47, 55, 82, 136], "function": [0, 1, 2, 3, 5, 7, 15, 17, 18, 19, 24, 25, 27, 29, 30, 32, 34, 37, 42, 47, 48, 49, 54, 55, 57, 66, 67, 68, 72, 75, 81, 82, 83, 88, 89, 91, 92, 93, 94, 95, 97, 100, 101, 102, 103, 106, 109, 110, 115, 116, 118, 119, 120, 123, 124, 125, 126, 127, 132, 135, 136, 140, 142, 144, 145, 147, 148, 149, 150, 151, 152, 158, 162, 163, 164, 165, 167], "execut": [0, 1, 3, 14, 16, 19, 21, 29, 31, 34, 38, 39, 47, 63, 71, 82, 84, 91, 93, 99, 111, 116, 118, 140, 146, 165], "exec": [0, 1, 3, 82], "defin": [0, 1, 3, 5, 6, 7, 24, 29, 32, 34, 36, 37, 41, 42, 44, 55, 63, 64, 66, 70, 71, 75, 82, 84, 88, 91, 94, 100, 101, 103, 104, 106, 108, 109, 115, 119, 127, 132, 136, 140, 150, 152, 158, 162, 164, 165, 167, 170], "have": [0, 1, 2, 3, 4, 5, 6, 8, 9, 11, 12, 13, 14, 16, 18, 19, 20, 22, 24, 25, 26, 27, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 42, 44, 45, 47, 48, 49, 51, 52, 55, 56, 58, 59, 60, 62, 66, 67, 68, 70, 71, 72, 75, 76, 77, 81, 82, 84, 85, 86, 88, 89, 92, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 111, 113, 115, 116, 118, 119, 120, 122, 123, 124, 125, 126, 127, 129, 130, 132, 133, 135, 136, 137, 139, 140, 141, 142, 143, 148, 149, 151, 153, 154, 158, 162, 164, 165, 167], "argument": [0, 1, 2, 3, 29, 32, 37, 48, 51, 54, 55, 57, 82, 88, 89, 93, 94, 97, 101, 103, 104, 106, 109, 116, 127, 136, 140, 142, 147, 148, 149, 158, 164, 167], "current_data": [0, 3, 27, 47, 81, 82], "version": [0, 1, 4, 5, 6, 7, 8, 9, 11, 13, 15, 16, 18, 19, 22, 24, 25, 30, 32, 34, 36, 41, 42, 44, 45, 47, 48, 49, 50, 52, 55, 57, 60, 61, 63, 64, 67, 68, 70, 71, 75, 76, 78, 81, 82, 84, 85, 89, 92, 96, 97, 99, 102, 104, 105, 107, 110, 112, 115, 116, 118, 119, 120, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 138, 140, 141, 142, 144, 145, 146, 148, 149, 150, 151, 152, 156, 157, 158, 162, 164, 167, 170], "liner": [0, 32], "pylab": [0, 42, 82], "my": [0, 22, 24, 57, 77, 89, 99, 150, 162], "custom": [0, 13, 16, 22, 24, 27, 67, 71, 78, 81, 89, 95, 101, 144], "sinc": [0, 3, 4, 5, 6, 16, 19, 22, 24, 30, 34, 36, 42, 44, 45, 51, 52, 55, 57, 58, 59, 62, 63, 66, 67, 72, 75, 76, 77, 81, 82, 88, 89, 90, 97, 98, 115, 116, 118, 119, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 142, 143, 148, 149, 151, 162, 165, 166], "ha": [0, 4, 5, 6, 8, 12, 13, 14, 16, 18, 19, 20, 22, 23, 24, 25, 26, 29, 30, 31, 34, 36, 37, 38, 39, 42, 45, 47, 49, 54, 55, 56, 57, 58, 59, 63, 64, 66, 68, 70, 71, 72, 75, 77, 78, 82, 86, 89, 91, 94, 98, 101, 102, 103, 106, 107, 109, 111, 112, 113, 115, 116, 117, 118, 119, 120, 125, 126, 127, 128, 129, 130, 132, 135, 136, 137, 138, 140, 142, 143, 148, 149, 151, 154, 158, 161, 162, 164, 167, 168, 170], "been": [0, 1, 4, 5, 8, 9, 13, 14, 16, 18, 19, 20, 22, 23, 24, 26, 27, 29, 30, 31, 34, 35, 36, 37, 38, 39, 42, 45, 47, 48, 49, 52, 55, 56, 57, 58, 59, 64, 66, 68, 70, 71, 75, 78, 82, 84, 86, 89, 91, 97, 98, 102, 103, 106, 107, 108, 109, 111, 113, 115, 117, 118, 119, 120, 122, 125, 126, 127, 128, 129, 130, 132, 133, 135, 136, 137, 139, 140, 142, 148, 149, 151, 154, 162, 164, 167], "import": [0, 3, 5, 18, 19, 24, 30, 34, 36, 40, 41, 42, 47, 51, 52, 55, 57, 60, 62, 63, 67, 68, 70, 75, 78, 82, 84, 88, 89, 91, 93, 94, 96, 97, 98, 99, 100, 101, 103, 104, 105, 106, 108, 116, 118, 125, 130, 140, 141, 142, 143, 144, 148, 149, 150, 151, 152, 154, 162, 164, 166, 168], "modul": [0, 7, 8, 12, 18, 19, 27, 30, 31, 34, 36, 42, 44, 48, 49, 53, 55, 56, 57, 62, 64, 67, 70, 75, 76, 81, 82, 83, 84, 88, 89, 92, 93, 97, 101, 102, 103, 106, 110, 111, 116, 118, 120, 121, 123, 126, 127, 128, 129, 130, 137, 139, 142, 148, 149, 151, 158, 162, 163], "form": [0, 2, 3, 4, 5, 6, 8, 12, 19, 21, 22, 24, 26, 30, 31, 32, 34, 36, 38, 39, 41, 45, 46, 47, 49, 51, 55, 59, 64, 65, 68, 75, 77, 86, 89, 98, 102, 104, 108, 109, 115, 120, 127, 128, 129, 130, 139, 140, 142, 148, 149, 150, 151, 156, 162, 164, 167, 170], "better": [0, 6, 18, 19, 24, 34, 42, 47, 49, 70, 71, 72, 76, 77, 81, 104, 113, 115, 118, 124, 125, 126, 129, 130, 132, 133], "want": [0, 2, 3, 10, 12, 13, 14, 19, 21, 22, 26, 30, 31, 34, 35, 36, 37, 38, 39, 40, 42, 43, 44, 47, 51, 54, 55, 58, 59, 61, 62, 63, 66, 67, 68, 70, 76, 77, 82, 84, 88, 89, 90, 91, 97, 98, 99, 111, 114, 116, 124, 127, 130, 136, 138, 140, 141, 142, 146, 147, 150, 155, 158, 162, 164, 165], "do": [0, 1, 4, 6, 8, 11, 12, 13, 15, 18, 19, 21, 22, 27, 30, 31, 34, 35, 36, 38, 39, 40, 42, 43, 44, 47, 52, 54, 55, 56, 58, 61, 62, 66, 67, 70, 75, 76, 77, 82, 84, 88, 89, 93, 94, 96, 97, 98, 99, 100, 101, 105, 107, 108, 109, 111, 114, 115, 116, 118, 119, 123, 124, 125, 126, 127, 129, 130, 132, 135, 136, 144, 145, 147, 148, 149, 150, 151, 156, 157, 158, 160, 162, 165, 167, 168], "sever": [0, 1, 2, 5, 10, 12, 16, 19, 22, 24, 25, 26, 31, 32, 36, 37, 38, 39, 43, 47, 50, 52, 55, 59, 62, 64, 71, 72, 75, 81, 105, 115, 116, 117, 119, 120, 123, 124, 125, 126, 128, 129, 130, 132, 142, 147, 151, 160, 162, 164, 167], "thing": [0, 13, 16, 19, 24, 30, 31, 42, 52, 58, 63, 84, 93, 115, 116, 118, 126, 131, 139], "need": [0, 4, 5, 6, 12, 13, 15, 16, 18, 19, 20, 21, 22, 24, 29, 30, 31, 34, 35, 36, 37, 38, 39, 40, 42, 43, 44, 47, 49, 52, 53, 57, 58, 59, 60, 62, 63, 64, 66, 67, 70, 71, 75, 76, 77, 78, 84, 85, 88, 89, 91, 96, 97, 98, 99, 101, 104, 108, 110, 111, 113, 115, 116, 118, 120, 124, 125, 127, 128, 132, 134, 135, 136, 137, 139, 140, 142, 144, 145, 146, 148, 149, 150, 151, 152, 156, 157, 158, 159, 160, 162, 164, 166, 167, 170], "access": [0, 17, 29, 31, 59, 62, 93, 94, 96, 104, 106, 109], "data": [0, 1, 3, 5, 18, 19, 27, 29, 32, 34, 35, 36, 37, 38, 39, 41, 42, 43, 45, 47, 48, 50, 51, 57, 58, 63, 64, 65, 66, 70, 71, 73, 81, 82, 83, 84, 86, 88, 91, 94, 97, 98, 100, 102, 103, 104, 106, 109, 112, 113, 114, 115, 118, 119, 121, 122, 124, 125, 127, 128, 129, 130, 132, 136, 137, 139, 140, 142, 143, 149, 150, 152, 158, 161, 163, 168], "store": [0, 1, 13, 19, 35, 37, 43, 55, 57, 58, 71, 77, 97, 98, 101, 106, 107, 108, 116, 119, 125, 147, 149, 151, 158, 161, 162, 164], "def": [0, 1, 3, 47, 55, 70, 82, 88, 94, 98, 101, 104, 150, 152, 158], "1d": [0, 4, 7, 15, 19, 21, 24, 27, 31, 32, 37, 48, 49, 63, 67, 71, 72, 81, 82, 88, 96, 99, 100, 102, 104, 110, 112, 118, 123, 126, 128, 129, 137, 140, 141, 145, 149, 157, 164, 167], "alreadi": [0, 1, 6, 12, 13, 19, 20, 30, 31, 44, 59, 60, 62, 63, 64, 70, 84, 85, 99, 103, 105, 108, 110, 118, 120, 128, 135, 136, 137, 146, 164], "xlower": [0, 3, 16, 24, 29, 42, 49, 89, 127, 150, 152, 162, 164, 167], "xupper": [0, 24, 49, 150, 152, 164], "k": [0, 3, 4, 6, 17, 71, 92, 97, 102, 108, 142], "get": [0, 10, 13, 19, 26, 30, 43, 48, 55, 57, 58, 60, 61, 62, 66, 67, 70, 81, 85, 88, 89, 94, 97, 98, 99, 105, 107, 108, 109, 110, 113, 114, 116, 126, 140, 142, 149, 158, 164, 165], "variabl": [0, 3, 5, 13, 14, 18, 19, 24, 27, 29, 30, 32, 34, 37, 38, 39, 40, 43, 47, 48, 49, 54, 55, 58, 61, 62, 71, 74, 76, 77, 78, 82, 88, 89, 97, 99, 103, 104, 106, 107, 109, 111, 118, 123, 124, 125, 127, 129, 135, 136, 139, 140, 148, 149, 150, 152, 158, 162, 164, 165, 167], "just": [0, 6, 30, 34, 43, 58, 59, 88, 89, 91, 93, 97, 98, 99, 100, 101, 106, 109, 120, 127, 148, 167], "avail": [0, 4, 5, 10, 12, 16, 24, 25, 31, 34, 36, 42, 46, 47, 50, 52, 55, 62, 66, 70, 71, 72, 78, 81, 83, 84, 88, 91, 96, 97, 98, 100, 102, 104, 107, 108, 109, 110, 111, 115, 126, 137, 140, 141, 143, 148, 150, 153, 158, 159, 162], "var": [0, 3, 13, 29, 37, 158], "min": [0, 102, 164, 170], "max": [0, 32, 34, 42, 71, 102, 115, 120, 144, 150, 152, 164, 170], "primarili": [0, 19, 56, 77, 127, 128], "where": [0, 1, 3, 5, 6, 12, 13, 16, 18, 19, 24, 29, 32, 34, 36, 37, 38, 39, 41, 42, 43, 47, 48, 49, 52, 55, 57, 62, 63, 64, 66, 68, 70, 71, 72, 77, 78, 84, 91, 94, 95, 96, 97, 99, 102, 111, 115, 118, 119, 120, 123, 124, 125, 130, 132, 139, 141, 142, 143, 144, 147, 148, 149, 150, 151, 152, 158, 161, 162, 164, 167, 170], "horizont": [0, 55, 164], "implement": [0, 1, 4, 5, 7, 14, 16, 18, 19, 32, 42, 49, 63, 64, 67, 74, 86, 101, 102, 104, 108, 109, 116, 122, 125, 128, 130, 132, 140, 141, 148, 164, 167, 170], "claw": [0, 5, 6, 8, 11, 12, 13, 14, 15, 16, 18, 19, 21, 22, 24, 26, 30, 32, 34, 35, 36, 37, 38, 39, 40, 41, 43, 44, 46, 47, 48, 49, 51, 53, 54, 56, 58, 59, 61, 62, 63, 66, 67, 71, 74, 75, 76, 83, 88, 91, 93, 96, 97, 98, 99, 105, 107, 111, 112, 113, 114, 115, 116, 118, 119, 120, 122, 123, 126, 127, 129, 135, 136, 140, 144, 145, 150, 151, 152, 154, 155, 156, 157, 160, 161, 162, 164, 165, 167, 168], "visclaw": [0, 1, 7, 13, 24, 25, 26, 30, 36, 42, 47, 48, 50, 53, 55, 59, 60, 61, 62, 66, 70, 71, 78, 82, 83, 84, 85, 96, 100, 105, 111, 146, 147, 153], "src": [0, 5, 6, 11, 14, 15, 16, 18, 19, 21, 22, 30, 32, 34, 35, 36, 37, 42, 43, 44, 49, 51, 54, 56, 59, 62, 63, 66, 67, 71, 75, 76, 83, 100, 101, 109, 111, 112, 115, 116, 118, 120, 123, 124, 126, 127, 128, 129, 130, 132, 136, 137, 140, 144, 145, 148, 150, 152, 154, 156, 164, 165, 170], "python": [0, 3, 4, 7, 8, 11, 13, 14, 17, 21, 24, 25, 27, 29, 30, 31, 32, 35, 36, 37, 38, 39, 40, 43, 45, 47, 48, 50, 51, 54, 55, 57, 58, 59, 60, 61, 62, 63, 75, 77, 78, 81, 82, 83, 86, 87, 89, 93, 94, 96, 97, 99, 100, 101, 102, 104, 107, 108, 109, 116, 118, 120, 121, 123, 125, 126, 127, 128, 129, 132, 136, 137, 140, 141, 146, 151, 162, 164, 165, 168], "gaugetool": [0, 47, 123], "time_scal": 0, "scale": [0, 4, 32, 53, 55, 71, 78, 96, 97, 118, 119, 125, 127, 132, 151], "3600": [0, 34, 36, 77], "time_label": 0, "time_label_fonts": 0, "time_label_kwarg": [0, 136], "new_plotitem": [0, 3, 47, 55, 82, 147], "plot_typ": [0, 24, 47, 55, 82, 84, 147], "return": [0, 1, 2, 3, 32, 35, 37, 40, 51, 55, 63, 67, 70, 71, 82, 84, 91, 92, 94, 97, 98, 101, 102, 103, 104, 106, 109, 116, 126, 140, 142, 148, 150, 152, 158, 160, 164, 167, 170], "clawplotitem": [0, 1, 7, 24, 29, 81, 83, 118, 124, 127, 136, 147], "associ": [0, 1, 2, 6, 24, 55, 62, 76, 94, 97, 98, 116], "kei": [0, 1, 2, 13, 30, 32, 47, 97, 104, 108, 109, 158, 164], "provid": [0, 2, 4, 7, 10, 16, 19, 22, 29, 30, 32, 34, 36, 37, 41, 44, 48, 49, 50, 51, 52, 55, 57, 58, 63, 65, 67, 72, 75, 77, 81, 86, 89, 91, 92, 97, 98, 99, 101, 103, 104, 108, 109, 110, 113, 114, 116, 118, 124, 132, 136, 138, 140, 148, 157, 158, 161, 162, 164, 167], "one": [0, 1, 2, 3, 4, 5, 6, 8, 13, 15, 16, 18, 19, 22, 24, 26, 27, 29, 30, 31, 32, 34, 36, 37, 38, 39, 42, 47, 49, 50, 55, 57, 58, 59, 60, 61, 62, 63, 64, 68, 70, 71, 72, 74, 75, 77, 78, 81, 82, 88, 94, 97, 98, 99, 101, 103, 104, 105, 108, 109, 111, 113, 115, 116, 118, 124, 125, 127, 132, 135, 139, 140, 141, 142, 144, 145, 147, 148, 149, 150, 151, 152, 153, 156, 157, 158, 162, 164, 167, 168], "item1": [0, 84], "etc": [0, 2, 16, 21, 22, 26, 29, 30, 34, 35, 36, 52, 55, 58, 61, 63, 67, 77, 81, 89, 140, 147, 148, 151, 158, 167], "gethandl": [0, 2, 3], "handl": [0, 2, 3, 6, 34, 42, 44, 48, 57, 63, 76, 78, 81, 94, 97, 101, 103, 104, 106, 107, 108, 109, 111, 118, 119, 120, 122, 123, 125, 127, 128, 129, 130, 141, 144, 158, 164], "plot": [1, 2, 4, 7, 8, 12, 29, 31, 32, 38, 39, 40, 42, 43, 44, 45, 48, 49, 57, 59, 60, 63, 70, 77, 87, 88, 90, 91, 94, 95, 96, 98, 103, 105, 107, 108, 110, 111, 113, 118, 122, 123, 124, 125, 126, 127, 129, 130, 131, 135, 136, 142, 148, 160, 164], "outdir": [1, 3, 35, 36, 37, 38, 39, 47, 54, 66, 81, 84, 91, 93, 94, 98, 124, 150, 152, 165], "path": [1, 5, 13, 14, 32, 34, 37, 41, 42, 44, 47, 49, 51, 55, 58, 61, 62, 64, 66, 70, 74, 81, 82, 91, 96, 97, 99, 103, 109, 126, 127, 130, 136, 146, 151, 158, 164, 165], "directori": [1, 3, 5, 6, 11, 12, 13, 14, 15, 16, 19, 21, 22, 24, 25, 27, 30, 31, 33, 34, 36, 37, 38, 39, 40, 43, 45, 46, 47, 48, 51, 54, 55, 58, 59, 61, 63, 67, 71, 76, 80, 81, 84, 91, 93, 94, 96, 97, 98, 101, 108, 111, 112, 113, 115, 116, 118, 119, 124, 125, 126, 127, 129, 139, 140, 144, 145, 146, 147, 148, 149, 153, 156, 157, 160, 161, 162, 165, 167, 168], "clawpack": [1, 2, 4, 5, 6, 7, 11, 16, 18, 19, 28, 30, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 44, 45, 47, 48, 49, 50, 51, 52, 54, 55, 62, 63, 64, 65, 67, 70, 71, 73, 74, 75, 76, 77, 80, 81, 82, 83, 84, 85, 86, 87, 88, 90, 91, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 106, 107, 108, 109, 110, 111, 114, 116, 117, 119, 120, 121, 122, 123, 124, 125, 139, 140, 142, 146, 148, 149, 150, 151, 153, 155, 158, 160, 162, 164, 165, 167, 168, 170], "output": [1, 5, 7, 8, 13, 14, 16, 27, 29, 30, 31, 32, 35, 37, 38, 39, 43, 44, 47, 48, 50, 51, 53, 54, 55, 59, 64, 72, 75, 81, 82, 84, 89, 91, 92, 93, 94, 95, 96, 99, 100, 102, 103, 104, 105, 106, 108, 109, 111, 118, 119, 123, 124, 125, 126, 127, 129, 130, 131, 135, 136, 137, 140, 147, 150, 152, 158, 159, 160, 161, 164, 167, 168], "plotdir": [1, 84, 147], "hardcopi": [1, 82, 84, 147], "file": [1, 5, 6, 7, 8, 9, 11, 12, 14, 15, 18, 19, 20, 21, 22, 24, 25, 27, 29, 30, 32, 35, 37, 38, 39, 41, 43, 44, 45, 47, 48, 49, 50, 52, 54, 56, 62, 63, 64, 66, 70, 75, 77, 78, 81, 83, 86, 89, 91, 93, 94, 96, 97, 98, 99, 100, 101, 103, 106, 107, 109, 111, 112, 113, 115, 118, 119, 120, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 141, 143, 144, 145, 146, 147, 148, 149, 150, 152, 155, 156, 157, 158, 159, 161, 164, 165, 166, 168], "put": [1, 11, 16, 30, 31, 44, 58, 62, 63, 71, 88, 93, 101, 125, 146], "overwrit": [1, 91, 98, 103], "ok": [1, 39, 40, 91, 99, 109, 120, 160, 164], "old": [1, 7, 22, 24, 34, 42, 58, 59, 84, 91, 99, 100, 101, 104, 116, 124, 126, 127, 132, 135, 137, 140, 151, 162], "afterfram": [1, 29, 81], "produc": [1, 3, 24, 29, 32, 37, 38, 39, 43, 47, 48, 55, 57, 58, 63, 71, 76, 80, 81, 97, 115, 116, 132, 147, 164], "frame": [1, 2, 3, 29, 36, 37, 47, 55, 71, 77, 81, 82, 84, 88, 91, 95, 97, 99, 103, 105, 109, 125, 135, 136, 139, 147, 150, 152, 153], "done": [1, 6, 7, 8, 11, 13, 16, 21, 22, 30, 36, 38, 39, 42, 47, 50, 55, 57, 58, 60, 63, 66, 70, 71, 75, 81, 82, 84, 88, 92, 93, 96, 109, 115, 120, 124, 125, 129, 139, 140, 142, 147, 149, 151, 161, 164, 165, 166], "beforefram": [1, 29, 127], "befor": [1, 3, 4, 6, 14, 19, 30, 32, 34, 36, 37, 38, 39, 42, 43, 44, 47, 57, 58, 59, 60, 62, 63, 66, 67, 71, 76, 77, 84, 88, 91, 97, 99, 104, 106, 111, 115, 116, 118, 119, 120, 131, 135, 136, 138, 140, 143, 144, 148, 149, 162, 164, 165], "start": [1, 2, 4, 5, 6, 7, 9, 13, 14, 19, 26, 29, 30, 32, 34, 36, 38, 39, 40, 41, 42, 43, 47, 48, 49, 51, 55, 57, 58, 59, 60, 61, 62, 63, 66, 70, 74, 75, 77, 82, 84, 88, 99, 103, 104, 110, 111, 115, 116, 124, 127, 132, 138, 139, 140, 142, 144, 151, 154, 158, 160, 162, 167], "printfig": 1, "png": [1, 13, 38, 39, 42, 43, 55, 63, 70, 71, 125, 130, 142], "make": [1, 5, 11, 13, 14, 19, 21, 22, 24, 26, 27, 29, 30, 34, 36, 38, 39, 41, 43, 44, 47, 50, 52, 54, 55, 58, 59, 62, 63, 64, 66, 67, 68, 71, 76, 78, 81, 84, 85, 88, 89, 91, 94, 95, 96, 97, 101, 103, 109, 114, 116, 118, 119, 123, 124, 125, 126, 127, 129, 130, 131, 132, 133, 135, 136, 140, 142, 148, 162, 164, 166, 167], "html": [1, 12, 13, 25, 30, 32, 38, 39, 43, 46, 47, 55, 58, 59, 75, 81, 82, 93, 97, 99, 100, 110, 111, 116, 118, 128, 130, 135, 136, 158], "latex": [1, 55, 81, 100], "exist": [1, 19, 23, 32, 33, 36, 38, 39, 55, 62, 66, 70, 71, 82, 94, 98, 101, 103, 106, 109, 120, 126, 127, 144, 158, 164, 166], "print_format": [1, 55], "print_frameno": [1, 55], "list": [1, 3, 4, 7, 8, 9, 11, 13, 17, 18, 19, 20, 24, 27, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 43, 47, 49, 55, 57, 58, 60, 61, 62, 63, 65, 66, 67, 68, 71, 72, 75, 76, 77, 82, 84, 86, 88, 91, 92, 94, 97, 98, 100, 101, 102, 103, 104, 106, 107, 109, 111, 115, 118, 123, 125, 127, 132, 135, 136, 137, 139, 142, 146, 148, 149, 150, 151, 152, 158, 159, 161, 164], "int": [1, 2, 3, 32, 34, 63, 91, 92, 94, 97, 98, 103, 106, 148, 149, 151, 158, 164], "print_figno": [1, 55, 118], "iplotclaw_figno": 1, "interact": [1, 13, 24, 38, 39, 43, 47, 50, 66, 78, 81, 82, 89, 99, 100, 104, 105, 108, 111, 124, 125, 142], "mode": [1, 13, 30, 109, 161], "displai": [1, 13, 38, 39, 43, 47, 55, 63, 82, 98, 116, 151], "latex_fnam": 1, "tex": 1, "latex_titl": 1, "go": [1, 5, 13, 16, 19, 24, 27, 30, 32, 38, 39, 58, 59, 60, 62, 67, 70, 71, 77, 84, 88, 91, 93, 96, 97, 102, 117, 124, 125, 132, 139, 143, 147, 153, 158, 162, 166, 170], "result": [1, 3, 4, 7, 9, 12, 17, 18, 19, 27, 28, 31, 32, 34, 35, 36, 38, 39, 40, 45, 46, 47, 48, 51, 52, 57, 58, 59, 62, 63, 66, 68, 71, 72, 75, 77, 81, 82, 83, 84, 87, 91, 93, 96, 98, 102, 105, 109, 115, 116, 118, 119, 123, 125, 126, 127, 128, 130, 132, 135, 136, 144, 148, 149, 150, 152, 160, 162, 164, 166], "latex_framesperpag": 1, "how": [1, 6, 7, 12, 16, 24, 26, 30, 31, 32, 34, 36, 38, 39, 41, 42, 44, 47, 50, 55, 59, 63, 64, 66, 70, 75, 76, 77, 81, 91, 93, 95, 96, 97, 101, 104, 108, 109, 111, 113, 114, 115, 116, 120, 125, 127, 129, 130, 135, 138, 139, 140, 147, 148, 151, 153, 162, 164, 168], "mani": [1, 3, 4, 6, 12, 13, 18, 19, 22, 23, 24, 30, 36, 38, 39, 40, 44, 45, 46, 49, 50, 55, 56, 58, 63, 64, 66, 67, 70, 75, 76, 77, 82, 84, 85, 86, 88, 93, 96, 101, 103, 108, 109, 115, 117, 118, 119, 125, 127, 128, 129, 130, 134, 137, 140, 142, 147, 148, 149, 151, 162, 167], "try": [1, 30, 31, 38, 39, 40, 47, 55, 57, 62, 63, 70, 82, 90, 93, 96, 97, 103, 105, 107, 108, 109, 111, 116, 148, 160, 164, 165], "page": [1, 4, 9, 11, 13, 15, 17, 19, 20, 24, 26, 30, 52, 57, 59, 60, 61, 62, 93, 96, 99, 100, 107, 110, 112, 116, 118, 126, 130, 135, 136, 137, 143, 145, 147, 153, 156, 157, 166, 167], "latex_framesperlin": 1, "latex_figsperlin": 1, "recal": [1, 12, 42, 149], "latex_pdf": 1, "run": [1, 5, 6, 7, 12, 13, 14, 16, 19, 22, 24, 26, 27, 30, 34, 35, 36, 37, 42, 43, 45, 46, 47, 48, 54, 55, 56, 58, 59, 60, 61, 62, 63, 64, 66, 68, 71, 77, 78, 81, 82, 84, 85, 87, 89, 91, 94, 95, 96, 98, 101, 105, 107, 108, 109, 111, 113, 115, 118, 119, 120, 124, 125, 126, 127, 128, 129, 131, 132, 134, 139, 140, 150, 151, 152, 158, 160, 161, 164, 167], "pdflatex": 1, "pdf": [1, 32], "index": [1, 6, 13, 24, 25, 29, 35, 37, 47, 58, 59, 82, 94, 96, 99, 101, 102, 109, 118, 127, 132, 136, 148, 149, 150, 151, 152], "call": [1, 6, 9, 22, 24, 29, 32, 36, 37, 41, 44, 47, 54, 55, 67, 70, 71, 75, 77, 82, 84, 88, 89, 91, 92, 97, 98, 101, 103, 104, 106, 108, 109, 115, 116, 118, 119, 123, 124, 126, 127, 136, 140, 142, 144, 146, 148, 150, 151, 152, 158, 164, 167], "_plotindex": [1, 47, 118], "These": [1, 4, 5, 12, 16, 18, 19, 20, 25, 30, 31, 32, 34, 36, 41, 45, 47, 52, 55, 58, 63, 64, 67, 70, 71, 78, 82, 84, 88, 93, 96, 97, 98, 100, 106, 108, 112, 114, 115, 116, 118, 119, 125, 126, 127, 128, 132, 135, 136, 137, 139, 149, 153, 158, 159, 162, 166, 170], "new_plotfigur": [1, 2, 47, 55, 82, 147], "figno": [1, 2, 47, 55, 82, 84, 118, 147], "getfram": [1, 3, 84], "frameno": [1, 3, 29, 37], "clawsolut": 1, "solut": [1, 3, 4, 5, 16, 18, 19, 24, 27, 29, 31, 36, 37, 39, 47, 49, 51, 64, 71, 75, 77, 81, 84, 89, 91, 94, 96, 97, 98, 101, 102, 104, 106, 107, 108, 115, 116, 123, 124, 128, 135, 139, 140, 147, 148, 149, 150, 152, 160, 167, 170], "read": [1, 4, 5, 7, 19, 30, 32, 34, 35, 37, 38, 39, 47, 48, 49, 52, 53, 57, 62, 63, 64, 67, 70, 71, 75, 77, 81, 89, 91, 97, 98, 103, 109, 124, 125, 127, 128, 133, 135, 136, 150, 151, 152, 158, 162, 164, 167, 168], "fort": [1, 8, 29, 34, 36, 47, 71, 81, 97, 103, 120, 124, 125, 126, 135, 139, 148, 149, 150, 152, 161, 168], "q000n": [1, 8], "n": [1, 6, 16, 17, 19, 32, 34, 47, 51, 68, 84, 99, 105, 116, 118, 127, 142, 148, 151, 167, 170], "find": [1, 3, 4, 6, 12, 19, 26, 29, 30, 31, 32, 51, 55, 62, 66, 75, 78, 81, 86, 93, 101, 106, 107, 109, 111, 113, 127, 158, 165], "onc": [1, 5, 13, 24, 30, 31, 38, 39, 55, 59, 60, 61, 62, 70, 71, 75, 77, 84, 88, 98, 99, 100, 101, 106, 109, 125, 127, 133], "framesoln_dict": 1, "It": [1, 4, 6, 12, 19, 22, 24, 30, 31, 34, 36, 47, 49, 52, 53, 55, 57, 58, 63, 67, 75, 81, 82, 88, 91, 94, 97, 98, 99, 104, 108, 111, 115, 116, 120, 125, 135, 139, 142, 143, 144, 148, 149, 151, 162, 164, 165, 166, 167], "q": [1, 3, 5, 6, 16, 19, 22, 24, 29, 36, 37, 47, 71, 77, 81, 84, 88, 89, 94, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 108, 115, 120, 123, 125, 141, 148, 149, 150, 152, 162, 167, 168, 170], "onli": [1, 3, 5, 6, 8, 12, 13, 16, 18, 19, 21, 24, 29, 30, 32, 34, 36, 37, 41, 42, 45, 46, 47, 49, 52, 55, 58, 59, 60, 62, 63, 64, 67, 68, 71, 72, 75, 76, 77, 78, 82, 88, 91, 94, 97, 98, 99, 101, 103, 104, 105, 106, 108, 109, 110, 113, 115, 118, 119, 124, 125, 126, 127, 130, 132, 135, 139, 140, 141, 142, 143, 144, 146, 147, 148, 149, 150, 151, 152, 154, 158, 162, 164, 165, 166, 167, 170], "separ": [1, 30, 34, 36, 46, 55, 58, 63, 67, 72, 96, 104, 109, 142, 164], "clearfram": [1, 84], "remov": [1, 3, 22, 31, 36, 43, 56, 58, 62, 63, 66, 84, 99, 111, 118, 119, 122, 123, 135, 137, 144, 151, 164, 165], "more": [1, 2, 3, 4, 5, 7, 10, 12, 13, 14, 16, 17, 18, 19, 22, 24, 26, 28, 30, 31, 32, 34, 36, 38, 41, 47, 48, 49, 50, 52, 55, 57, 58, 59, 61, 62, 63, 64, 65, 66, 70, 71, 72, 75, 81, 82, 83, 84, 85, 86, 89, 91, 92, 94, 96, 97, 98, 99, 100, 101, 102, 104, 105, 106, 108, 109, 111, 114, 115, 116, 118, 119, 120, 123, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 140, 142, 143, 144, 146, 147, 148, 149, 150, 151, 153, 154, 158, 160, 161, 162, 164, 165, 166, 167, 170], "yet": [1, 13, 18, 22, 27, 52, 56, 58, 61, 63, 81, 104, 118, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 140, 148, 150, 169], "clearfigur": 1, "clear": [1, 2, 6, 71, 84, 135], "paramet": [1, 6, 7, 9, 16, 18, 19, 22, 27, 29, 32, 34, 35, 36, 38, 39, 42, 43, 45, 48, 49, 50, 52, 55, 57, 66, 67, 68, 71, 75, 76, 77, 81, 87, 88, 91, 92, 97, 98, 100, 102, 103, 106, 109, 112, 115, 119, 125, 130, 132, 135, 137, 139, 140, 141, 143, 144, 150, 152, 154, 159, 162, 164, 165, 167], "first": [1, 3, 5, 13, 14, 19, 21, 22, 24, 30, 32, 34, 36, 37, 38, 39, 40, 41, 42, 55, 58, 59, 62, 63, 66, 70, 71, 82, 84, 88, 89, 94, 97, 98, 99, 101, 104, 105, 106, 108, 109, 111, 113, 115, 119, 123, 128, 136, 140, 141, 142, 144, 148, 150, 151, 158, 160, 162, 164, 170], "sure": [1, 19, 22, 30, 43, 58, 59, 60, 61, 62, 71, 78, 88, 97, 99, 101, 103, 107, 109, 143, 164, 165, 166], "previou": [1, 30, 31, 47, 57, 59, 61, 62, 67, 70, 71, 84, 88, 104, 113, 119, 124, 125, 126, 127, 132, 139, 144, 148, 149, 150, 152, 162, 164], "chang": [1, 6, 8, 13, 15, 16, 18, 19, 21, 22, 27, 30, 31, 32, 34, 36, 43, 44, 49, 54, 55, 56, 57, 58, 59, 62, 63, 66, 67, 68, 70, 71, 76, 77, 78, 81, 84, 88, 89, 95, 97, 98, 106, 109, 110, 113, 114, 115, 116, 138, 140, 144, 145, 148, 149, 150, 151, 152, 154, 156, 157, 162, 165, 167], "re": [1, 17, 30, 43, 47, 66, 71, 78, 82, 84, 88, 105, 115, 116, 129, 165], "session": [1, 38, 39, 40, 100, 105], "iplotclaw": [1, 13, 24, 38, 39, 47, 50, 81, 82, 100, 111], "being": [1, 3, 4, 8, 13, 18, 19, 34, 42, 47, 49, 52, 57, 62, 70, 72, 84, 91, 97, 102, 103, 104, 109, 111, 113, 115, 118, 124, 126, 128, 137, 140, 142, 144, 148, 151, 165, 167], "getfigur": 1, "fignam": [1, 84], "getax": 1, "axesnam": [1, 84], "clawplotax": [1, 2, 3, 29, 82, 127, 132, 136, 147], "search": [1, 13, 14, 17, 62, 81, 96, 109, 111, 125, 127, 142, 146], "over": [1, 3, 5, 6, 13, 16, 17, 24, 30, 32, 34, 36, 41, 42, 47, 48, 49, 50, 52, 55, 57, 63, 64, 70, 71, 72, 75, 81, 97, 98, 104, 115, 118, 119, 120, 128, 130, 140, 142, 144, 147, 149, 150, 151, 161, 162, 167, 170], "found": [1, 4, 5, 6, 11, 12, 13, 16, 19, 24, 26, 29, 31, 34, 37, 38, 39, 43, 45, 47, 49, 51, 52, 54, 58, 63, 66, 67, 72, 80, 82, 83, 84, 88, 92, 99, 103, 107, 109, 111, 113, 116, 124, 127, 139, 143, 147, 154, 158, 164, 165], "uniqu": [1, 77, 118, 124, 158], "getitem": 1, "itemnam": [1, 84], "showitem": 1, "plotfram": 1, "number": [1, 2, 3, 4, 6, 8, 12, 16, 17, 19, 21, 24, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 46, 47, 49, 55, 58, 63, 66, 71, 76, 77, 78, 84, 88, 89, 91, 92, 93, 94, 96, 97, 98, 99, 101, 103, 104, 106, 108, 109, 110, 113, 115, 116, 118, 119, 120, 122, 123, 124, 125, 126, 127, 129, 136, 139, 140, 142, 148, 149, 150, 151, 152, 158, 159, 160, 164, 167], "conveni": [1, 29, 34, 36, 38, 39, 42, 47, 55, 84, 91, 93, 96, 98, 100, 108, 167, 170], "pyclaw": [1, 3, 4, 12, 17, 25, 26, 29, 30, 31, 46, 47, 59, 60, 61, 77, 78, 84, 85, 95, 99, 101, 107, 111, 138, 140, 141, 146], "plotter": [1, 3, 29, 84], "frametool": [1, 29, 84, 118, 130], "printfram": [1, 81], "still": [1, 5, 7, 8, 13, 16, 18, 19, 24, 26, 28, 34, 42, 45, 47, 49, 55, 56, 67, 70, 71, 77, 81, 86, 97, 104, 110, 115, 116, 118, 123, 124, 125, 126, 127, 128, 130, 135, 137, 139, 140, 151, 158], "clawplotdata": [2, 3, 29, 47, 55, 82, 84, 91, 147], "next": [2, 3, 6, 13, 20, 36, 38, 40, 47, 58, 71, 77, 82, 84, 87, 88, 96, 97, 99, 104, 108, 113, 115, 116, 118, 135, 136, 137, 148, 149, 151], "unus": [2, 97], "1001": 2, "figsiz": [2, 42, 70, 82, 136, 142, 147], "tupl": [2, 3, 32, 51, 63, 75, 82, 94, 97, 98, 164], "size": [2, 22, 32, 36, 37, 42, 47, 55, 63, 76, 77, 81, 94, 97, 99, 104, 125, 130, 135, 149, 150, 152, 154, 162, 164], "facecolor": [2, 82, 118, 136, 147], "background": [2, 81, 127, 147], "behind": [2, 42, 70, 144, 151], "By": [2, 15, 32, 44, 49, 51, 55, 57, 63, 75, 82, 84, 88, 94, 98, 100, 107, 127, 142, 145, 156, 157, 164, 170], "theme": 2, "tan": [2, 82], "public": [2, 4, 13, 17, 23, 138], "probabl": [2, 13, 30, 55, 68, 70, 110, 111], "w": [2, 17, 51, 140, 170], "white": [2, 63, 118], "keyword": [2, 3, 82, 88, 93, 94, 97, 103, 109, 116, 127, 147, 158, 164], "12": [2, 34, 42, 55, 70, 82, 142, 147], "5": [2, 4, 5, 8, 9, 11, 13, 18, 19, 21, 27, 32, 34, 35, 36, 37, 41, 42, 45, 47, 49, 51, 55, 56, 57, 58, 59, 63, 64, 66, 67, 68, 70, 75, 82, 92, 94, 98, 99, 101, 102, 104, 110, 111, 115, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 148, 149, 150, 151, 152, 158, 161, 162, 164, 169], "would": [2, 3, 12, 13, 16, 26, 29, 30, 34, 36, 41, 44, 55, 57, 59, 62, 64, 66, 67, 70, 72, 75, 77, 82, 86, 88, 91, 94, 98, 109, 116, 125, 142, 143, 144, 147, 148, 151, 158, 162, 167], "inch": [2, 55, 63, 82, 147], "red": [2, 3, 30, 47, 63, 82, 116, 147], "option": [2, 12, 13, 16, 19, 22, 24, 27, 30, 31, 32, 34, 36, 37, 38, 39, 43, 44, 51, 54, 57, 60, 62, 66, 71, 77, 81, 82, 88, 89, 91, 93, 94, 95, 97, 98, 100, 103, 104, 105, 108, 109, 111, 112, 115, 116, 118, 120, 123, 124, 125, 128, 130, 133, 135, 137, 142, 146, 147, 148, 150, 151, 152, 153, 158, 164], "clf_each_fram": 2, "clf": 2, "axes1": [2, 84], "shown": [3, 13, 18, 19, 58, 63, 67, 68, 71, 78, 98, 118, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 142, 164, 167], "fragment": 3, "typic": [3, 22, 42, 66, 67, 71, 72, 75, 77, 78, 84, 89, 99, 101, 104, 106, 115, 149, 150, 161, 162, 165, 166, 167, 170], "assum": [3, 5, 22, 24, 32, 34, 36, 37, 39, 42, 49, 51, 52, 55, 57, 58, 59, 63, 71, 75, 81, 97, 98, 100, 101, 102, 108, 109, 115, 123, 136, 142, 143, 148, 151, 158, 159, 162, 164, 166, 170], "instanc": [3, 30, 37, 55, 75, 78, 84, 88, 89, 91, 94, 97, 98, 101, 142, 151], "type": [3, 4, 7, 13, 17, 18, 22, 30, 32, 38, 39, 43, 47, 48, 55, 66, 71, 82, 83, 84, 88, 89, 90, 92, 94, 97, 99, 100, 104, 105, 108, 109, 142, 149, 150, 151, 158, 159, 162, 164, 170], "dimension": [3, 7, 8, 17, 19, 24, 27, 32, 34, 36, 38, 39, 47, 49, 52, 56, 71, 94, 101, 123, 124, 126, 129, 150, 151, 152, 164, 167], "point": [3, 5, 6, 13, 15, 16, 17, 22, 30, 32, 35, 36, 38, 39, 41, 42, 44, 47, 48, 49, 50, 51, 52, 55, 57, 58, 59, 61, 62, 63, 64, 71, 72, 75, 88, 98, 99, 103, 109, 110, 111, 115, 118, 126, 128, 130, 136, 139, 140, 142, 143, 144, 145, 146, 148, 149, 150, 151, 156, 157, 158, 162, 164, 165, 167], "slice": [3, 49, 71, 140], "scatter": [3, 24, 71], "radial": [3, 18, 34, 49, 51, 151, 167], "symmetr": [3, 49, 51, 167], "between": [3, 4, 5, 6, 13, 16, 25, 27, 30, 32, 33, 34, 36, 37, 41, 51, 55, 59, 63, 70, 71, 72, 75, 76, 78, 81, 91, 94, 98, 104, 106, 107, 109, 110, 111, 115, 118, 124, 125, 140, 142, 143, 148, 149, 150, 151, 152, 153, 154, 161, 162, 164, 166, 167], "plot_var": [3, 29, 47, 55, 82, 83], "fill_var2": 3, "diment": 3, "raster": [3, 55, 57, 135, 162], "contour": [3, 32, 47, 55, 57, 71, 110, 147, 164], "pcolor": [3, 47, 81, 110, 118, 135, 164], "2d_schlieren": 3, "schlieren": [3, 71], "2d_patch": [3, 24], "cell": [3, 4, 5, 7, 8, 15, 16, 18, 19, 22, 24, 27, 29, 34, 35, 36, 37, 47, 48, 49, 55, 57, 63, 70, 71, 72, 76, 77, 78, 88, 94, 97, 99, 102, 104, 106, 108, 115, 119, 120, 124, 125, 126, 127, 128, 129, 130, 132, 136, 140, 143, 144, 145, 148, 149, 150, 152, 154, 159, 161, 162, 167, 170], "patch": [3, 6, 7, 16, 19, 24, 29, 34, 42, 55, 71, 75, 76, 77, 81, 82, 97, 99, 103, 106, 115, 125, 127, 130, 132, 144, 147, 149, 161, 162, 167], "edg": [3, 6, 15, 16, 19, 29, 32, 34, 35, 36, 37, 41, 49, 63, 75, 94, 102, 140, 142, 145, 149, 150, 152, 167], "hillshad": [3, 118], "come": [3, 30, 82, 84, 93, 99, 104, 123, 162, 167], "parent": [3, 29, 94, 106, 109], "integ": [3, 34, 35, 36, 47, 55, 63, 68, 70, 82, 89, 97, 103, 115, 118, 126, 129, 140, 148, 151, 158, 164], "compon": [3, 16, 19, 22, 24, 27, 39, 47, 61, 62, 71, 77, 81, 101, 103, 105, 106, 115, 123, 132, 141, 148, 149, 150, 162, 167], "correspond": [3, 6, 12, 25, 27, 29, 32, 35, 36, 37, 47, 49, 51, 52, 57, 58, 59, 63, 71, 75, 82, 88, 92, 94, 97, 98, 101, 103, 106, 115, 116, 140, 142, 143, 148, 149, 150, 151, 152, 158, 162, 166, 167], "appli": [3, 4, 5, 6, 13, 16, 17, 19, 27, 32, 52, 55, 57, 68, 70, 75, 82, 84, 92, 94, 97, 104, 115, 139, 148, 151, 167], "comput": [3, 4, 5, 6, 13, 16, 17, 18, 19, 29, 31, 32, 34, 35, 36, 37, 42, 47, 49, 51, 55, 57, 62, 63, 64, 66, 72, 75, 81, 82, 84, 89, 91, 94, 96, 97, 98, 99, 104, 108, 111, 113, 115, 118, 119, 120, 124, 125, 129, 132, 135, 137, 140, 144, 148, 150, 151, 152, 159, 162, 167, 170], "signatur": [3, 89, 92, 94, 95, 97, 102, 158], "hold": [3, 37, 84, 108, 115], "current": [3, 5, 13, 14, 19, 22, 24, 26, 29, 30, 31, 32, 34, 37, 41, 42, 44, 47, 48, 49, 52, 57, 58, 59, 61, 62, 63, 64, 71, 73, 77, 82, 84, 94, 97, 98, 99, 104, 106, 109, 111, 115, 116, 118, 124, 126, 127, 137, 139, 143, 147, 148, 149, 150, 151, 152, 154, 158, 159, 162, 164, 166], "afteritem": [3, 29], "afterpatch": [3, 29], "There": [3, 6, 13, 24, 36, 39, 43, 55, 58, 59, 66, 70, 75, 77, 84, 85, 98, 105, 113, 126, 127, 147, 148, 154, 159, 160, 167, 169], "calcul": [3, 5, 6, 18, 19, 29, 32, 35, 37, 48, 51, 71, 75, 82, 94, 102, 104, 118, 120, 125, 164], "cd": [3, 13, 30, 38, 39, 40, 56, 58, 59, 61, 62, 84, 93, 96, 99, 105, 116, 160], "On": [3, 5, 13, 55, 76, 85, 126, 136, 142, 146, 167], "ylower": [3, 24, 29, 42, 89, 127, 150, 162, 164], "patchno": [3, 29], "out": [3, 16, 17, 26, 28, 31, 32, 34, 36, 37, 38, 39, 42, 47, 48, 49, 54, 56, 57, 58, 59, 62, 63, 64, 65, 66, 71, 75, 82, 85, 86, 88, 89, 91, 97, 98, 99, 100, 103, 108, 110, 111, 113, 116, 125, 127, 129, 130, 140, 142, 149, 150, 152, 158, 164, 165], "lower": [3, 24, 32, 34, 35, 41, 49, 57, 70, 77, 94, 99, 142, 144, 148, 150, 152, 162, 164, 166], "left": [3, 5, 10, 13, 16, 20, 27, 29, 32, 34, 57, 77, 84, 94, 101, 102, 108, 118, 126, 132, 135, 136, 137, 138, 139, 140, 143, 149, 162, 164, 166, 170], "mappedgrid": [3, 71], "map": [3, 16, 18, 31, 32, 42, 48, 63, 70, 71, 82, 86, 89, 94, 96, 101, 115, 123, 127, 132, 141, 164, 170], "mapc2p": [3, 27, 29, 49, 71, 89, 94, 132], "underli": [3, 55, 125], "requir": [3, 4, 16, 18, 19, 22, 24, 27, 29, 30, 32, 34, 36, 37, 38, 39, 43, 48, 49, 51, 52, 59, 62, 70, 71, 75, 78, 81, 84, 85, 88, 89, 94, 97, 100, 101, 104, 105, 106, 108, 109, 110, 115, 116, 118, 119, 120, 123, 125, 128, 130, 132, 135, 137, 140, 141, 142, 147, 148, 149, 150, 151, 152, 158, 159, 162, 165, 168, 170], "depend": [3, 13, 16, 30, 31, 32, 34, 37, 38, 39, 43, 44, 50, 52, 55, 66, 68, 71, 75, 82, 87, 97, 102, 103, 104, 109, 111, 115, 127, 144, 149, 151, 164, 165, 167, 170], "summar": [3, 30, 33, 115, 117, 167], "plotstyl": [3, 47, 82, 147], "anyth": [3, 6, 30, 31, 62, 67, 116, 127], "valid": [3, 52, 75, 91, 98, 103, 106, 125, 151, 158, 159, 164], "fmt": 3, "group": [3, 13, 26, 30, 32, 52, 93, 97, 99, 107, 124, 140], "solid": [3, 16, 55, 75, 101, 147, 148, 150, 152], "dash": [3, 99], "o": [3, 5, 17, 41, 42, 43, 70, 72, 82, 85, 86, 89, 97, 98, 107, 127, 150, 164, 167], "circl": [3, 51, 82, 118], "bo": 3, "blue": [3, 11, 42, 47, 63, 70, 82, 142, 164], "though": [3, 42, 78, 158, 162], "also": [3, 4, 5, 6, 7, 8, 9, 11, 12, 16, 17, 18, 19, 20, 22, 24, 25, 26, 27, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 44, 45, 46, 47, 48, 49, 51, 52, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 66, 67, 70, 71, 75, 76, 77, 78, 81, 82, 84, 88, 90, 91, 94, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 118, 119, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 146, 148, 149, 150, 151, 152, 153, 156, 157, 158, 159, 160, 161, 162, 164, 165, 166, 167, 169, 170], "overrul": 3, "r": [3, 4, 6, 17, 30, 47, 51, 56, 58, 70, 71, 74, 82, 88, 92, 99, 101, 118, 140, 142, 147, 164, 170], "ff0000": [3, 63], "No": [3, 43, 55, 59, 71, 94, 104, 133, 140, 148, 151, 165], "extra": [3, 55, 141], "give": [3, 6, 9, 10, 13, 16, 17, 18, 19, 26, 30, 32, 34, 35, 36, 38, 39, 47, 49, 56, 63, 64, 70, 72, 75, 76, 77, 82, 84, 99, 100, 104, 116, 120, 124, 125, 129, 132, 142, 148, 151, 162, 164, 166], "polygon": [3, 7, 41, 55, 63, 130, 164], "curv": [3, 47, 81, 142], "fill_between": 3, "plot_var2": 3, "zero": [3, 16, 32, 34, 42, 44, 47, 63, 71, 72, 88, 101, 102, 106, 108, 132, 142, 143], "fill_wher": 3, "plotitem": [3, 29, 47, 82, 147], "mean": [3, 13, 24, 30, 34, 42, 47, 52, 56, 62, 71, 72, 98, 99, 115, 118, 140, 143, 148, 150, 152, 166], "map_2d_to_1d": 3, "In": [3, 5, 6, 8, 11, 12, 15, 16, 18, 19, 21, 22, 24, 29, 32, 34, 36, 41, 44, 47, 48, 49, 52, 55, 56, 57, 58, 59, 62, 63, 64, 66, 67, 70, 71, 72, 74, 75, 77, 78, 82, 83, 84, 88, 89, 94, 96, 97, 98, 99, 100, 101, 102, 104, 106, 109, 111, 112, 113, 115, 118, 119, 120, 123, 124, 125, 127, 128, 132, 136, 139, 140, 142, 144, 145, 146, 148, 149, 151, 156, 157, 162, 164, 165, 167, 170], "about": [3, 5, 7, 13, 14, 16, 18, 19, 24, 27, 35, 36, 37, 38, 39, 43, 49, 51, 52, 57, 59, 63, 66, 68, 71, 77, 83, 85, 88, 96, 97, 99, 104, 111, 116, 124, 128, 130, 135, 136, 140, 147, 149, 150, 151, 162, 165, 167, 170], "j": [3, 4, 5, 15, 17, 22, 24, 29, 35, 42, 56, 63, 70, 71, 77, 84, 96, 97, 115, 119, 120, 144, 145], "v": [3, 16, 27, 31, 32, 34, 36, 37, 51, 64, 67, 116, 124, 149, 162], "radiu": [3, 151, 158, 159, 164], "q0_vs_radiu": 3, "convert": [3, 24, 27, 32, 35, 37, 45, 51, 55, 62, 63, 66, 75, 78, 89, 96, 101, 109, 110, 127, 130, 136, 137, 148, 149, 158, 162, 166], "numpi": [3, 13, 32, 34, 36, 37, 42, 51, 70, 85, 87, 88, 89, 91, 94, 101, 106, 107, 108, 110, 116, 137, 141, 142, 150, 164, 165], "sqrt": [3, 34, 37, 49, 68, 88, 101, 102, 108, 150], "q0": [3, 101], "work": [3, 5, 8, 13, 16, 19, 21, 22, 24, 26, 27, 28, 30, 31, 34, 36, 38, 39, 43, 48, 52, 55, 56, 57, 58, 59, 60, 61, 62, 63, 70, 71, 74, 75, 76, 82, 85, 86, 87, 88, 90, 91, 92, 96, 97, 98, 99, 102, 104, 105, 110, 111, 113, 114, 115, 116, 118, 121, 122, 123, 124, 125, 126, 127, 130, 132, 133, 138, 140, 146, 147, 148, 149, 153, 159, 162, 165, 169], "symbol": [3, 71, 111], "best": [3, 4, 16, 24, 28, 30, 36, 44, 49, 55, 57, 59, 60, 66, 72, 74, 76, 81, 82, 97, 101, 113, 114, 115, 116, 127, 138, 140, 151, 155, 158, 162, 167], "descript": [3, 4, 6, 9, 24, 25, 27, 32, 36, 37, 63, 71, 75, 78, 81, 96, 97, 109, 113, 115, 137, 140, 141, 151, 158, 162, 170], "celledges_show": [3, 24], "draw": 3, "amr_celledges_show": 3, "level": [3, 6, 7, 16, 19, 25, 29, 31, 34, 36, 41, 42, 47, 48, 50, 51, 52, 55, 58, 59, 61, 62, 71, 72, 76, 77, 89, 91, 94, 96, 97, 98, 104, 111, 112, 115, 116, 119, 120, 124, 125, 127, 130, 139, 142, 143, 146, 148, 149, 150, 152, 161, 162, 164, 166, 167], "patchedges_show": [3, 24], "mostli": [3, 81, 96, 130, 137], "contour_level": [3, 164], "three": [3, 13, 17, 24, 32, 34, 37, 52, 55, 67, 71, 75, 99, 103, 109, 116, 142, 148, 151, 162, 164, 167], "contour_nlevel": 3, "contour_min": 3, "minimum": [3, 19, 34, 47, 55, 75, 108, 125, 151, 164], "contour_max": 3, "maximum": [3, 24, 32, 34, 35, 36, 48, 71, 72, 104, 108, 115, 119, 120, 127, 130, 148, 149, 150, 152, 158, 159], "contour_color": 3, "specif": [3, 5, 12, 19, 24, 30, 32, 47, 48, 49, 51, 55, 56, 62, 65, 67, 68, 77, 86, 87, 89, 91, 96, 97, 98, 102, 103, 109, 113, 125, 126, 127, 130, 147, 148, 149, 150, 152, 159, 162], "b": [3, 5, 17, 30, 32, 34, 35, 36, 37, 42, 47, 49, 56, 58, 59, 68, 72, 82, 104, 115, 123, 130, 142, 143, 144, 151, 164, 166], "0000ff": [3, 63], "colormap": [3, 32, 42, 50, 55, 70, 71, 81, 83, 124, 130, 164], "amr_contour_color": 3, "As": [3, 18, 19, 39, 42, 48, 49, 52, 58, 59, 63, 64, 88, 108, 110, 114, 118, 119, 130, 140, 141, 144, 151, 154, 160, 167], "black": [3, 47], "subsequ": [3, 10, 71], "both": [3, 16, 18, 19, 30, 32, 35, 36, 37, 38, 39, 41, 42, 47, 52, 57, 60, 62, 67, 70, 71, 75, 77, 89, 97, 98, 99, 104, 105, 115, 116, 123, 124, 127, 130, 135, 140, 141, 142, 144, 148, 149, 150, 152, 156, 162, 167], "fine": [3, 19, 34, 35, 36, 42, 49, 58, 74, 78, 96, 101, 115, 118, 125, 132, 142, 144, 148, 149, 151, 162, 167], "coars": [3, 34, 36, 55, 115, 118, 125, 132, 148, 162, 167], "anoth": [3, 19, 24, 34, 36, 42, 47, 51, 55, 62, 63, 77, 81, 85, 93, 104, 107, 116, 127, 158, 167], "refin": [3, 4, 5, 7, 8, 17, 19, 24, 36, 48, 49, 52, 55, 56, 57, 70, 71, 77, 78, 88, 125, 127, 128, 130, 132, 142, 144, 147, 148, 149, 150, 161, 162, 167], "region": [3, 6, 7, 13, 16, 19, 24, 34, 36, 41, 42, 48, 52, 53, 55, 63, 68, 72, 75, 78, 113, 118, 127, 130, 132, 143, 144, 149, 150, 154, 162, 164], "lack": 3, "hidden": [3, 66, 82], "blank": [3, 35, 63, 158], "coarser": [3, 16, 19, 57, 125, 144, 148, 149, 167], "easili": [3, 13, 30, 34, 55, 58, 71, 82, 89, 94, 105, 109, 116, 118, 130, 153], "contour_show": 3, "commonli": [3, 19, 71, 82, 84], "amr_contour_show": 3, "determin": [3, 5, 6, 32, 34, 37, 42, 47, 48, 49, 52, 54, 55, 58, 63, 72, 75, 82, 92, 94, 97, 102, 106, 111, 115, 120, 124, 125, 139, 142, 143, 147, 148, 149, 151, 164, 167], "whether": [3, 6, 13, 16, 24, 51, 57, 60, 62, 64, 65, 66, 71, 86, 94, 97, 98, 102, 103, 104, 115, 116, 125, 140, 142, 148, 149, 151, 164], "view": [3, 4, 24, 36, 38, 39, 47, 48, 49, 51, 55, 57, 58, 63, 77, 81, 83, 84, 88, 99, 105, 110, 123, 127, 153, 155], "finest": [3, 19, 34, 36, 42, 47, 72, 127, 161, 164], "contour_kwarg": [3, 164], "pcolor_cmap": [3, 55], "pcolor_cmin": 3, "pcolor_cmax": 3, "thei": [3, 5, 6, 13, 16, 18, 19, 26, 29, 30, 32, 34, 36, 41, 42, 45, 47, 49, 52, 55, 58, 59, 62, 63, 64, 67, 70, 71, 77, 81, 94, 96, 101, 104, 109, 115, 116, 125, 132, 144, 147, 151, 154, 158, 162, 164, 167], "chosen": [3, 31, 34, 41, 42, 49, 55, 57, 70, 108, 115, 132, 143, 149], "vari": [3, 15, 17, 27, 32, 42, 48, 49, 57, 68, 72, 101, 103, 123, 130, 140, 141, 143, 145, 149, 151, 170], "yield": [3, 18, 19], "veri": [3, 5, 16, 17, 18, 19, 24, 49, 52, 55, 59, 60, 63, 75, 82, 86, 89, 97, 98, 99, 100, 101, 104, 116, 118, 120, 124, 135, 142, 144, 148, 159, 162], "confus": [3, 57, 62, 111, 132, 140], "add_colorbar": [3, 32, 164], "ad": [3, 12, 16, 22, 24, 26, 27, 29, 31, 34, 36, 37, 44, 47, 51, 57, 58, 59, 62, 63, 64, 68, 71, 72, 75, 82, 87, 89, 92, 94, 95, 98, 99, 111, 112, 113, 115, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 133, 135, 136, 137, 139, 144, 148, 149, 151, 154, 158, 161, 164, 168], "imshow_cmap": 3, "imshow_cmin": 3, "imshow_cmax": 3, "hillshade_vertical_exagger": 3, "vertic": [3, 32, 41, 52, 55, 63, 70, 142, 143, 151, 164, 166], "exagger": 3, "calul": 3, "hillshade_azimuth_degre": 3, "light": [3, 55, 71, 115], "sourc": [3, 4, 17, 18, 19, 25, 27, 30, 32, 44, 48, 49, 55, 56, 58, 59, 61, 62, 63, 65, 67, 68, 81, 86, 89, 93, 94, 95, 104, 105, 107, 108, 109, 113, 114, 116, 118, 125, 126, 127, 136, 137, 141, 143, 148, 150, 151, 152, 155, 156, 157, 158, 162], "azimuth": 3, "angl": [3, 16, 32, 51, 75], "315": 3, "northwest": 3, "360": [3, 51, 55, 75], "degre": [3, 32, 49, 51, 55, 63, 72, 75], "clockwis": [3, 34, 51, 75, 164], "north": [3, 34, 42, 49, 51, 70, 75], "recommend": [3, 4, 18, 19, 32, 34, 36, 38, 39, 58, 59, 60, 62, 76, 81, 90, 94, 96, 97, 99, 100, 104, 105, 107, 108, 115, 127, 135, 137, 148, 150, 152, 168], "proper": [3, 6, 15, 42, 47, 56, 57, 58, 59, 63, 68, 70, 71, 97, 109, 119, 125, 145, 149, 150, 156, 157, 158, 167], "interpret": [3, 32, 57, 75, 97, 127, 162], "peopl": [3, 4, 12, 13, 86], "hillshade_altitude_degre": 3, "altitud": 3, "horizon": 3, "45": [3, 104], "90": [3, 27, 32, 49, 55, 67, 75, 105, 107, 136], "hillshade_latlon": 3, "correct": [3, 18, 19, 22, 30, 44, 58, 59, 67, 68, 71, 82, 88, 94, 97, 99, 103, 109, 119, 120, 124, 144, 148, 150, 151, 152], "unit": [3, 32, 49, 50, 51, 56, 75, 94, 125, 136, 158], "z": [3, 42, 57, 63, 70, 71, 88, 94, 102, 108, 142, 148, 149, 162, 164], "111200": 3, "reflect": [3, 4, 5, 16, 30, 115, 127, 148, 150, 152], "relat": [3, 7, 19, 24, 26, 58, 78, 102, 113, 126, 130, 132, 143], "pre": [3, 13, 35, 59, 90, 97], "pend": 3, "amr_": [3, 7], "whose": [3, 49, 82, 89, 101, 102, 144, 148, 149, 164], "origin": [3, 6, 13, 16, 18, 19, 22, 30, 32, 36, 37, 45, 47, 56, 58, 63, 70, 76, 77, 89, 104, 109, 119, 125, 132, 139, 149, 150, 151, 152, 164], "hand": [3, 5, 19, 20, 21, 22, 68, 88, 116, 118, 135, 136, 137, 142], "higher": [3, 6, 18, 19, 55, 94, 104, 105, 115, 130, 140, 142, 143, 144], "shorter": [3, 115, 164], "last": [3, 20, 29, 34, 36, 59, 61, 82, 88, 89, 101, 108, 118, 124, 135, 136, 137, 148, 158], "repeatedli": [3, 99, 105, 149], "finer": [3, 7, 19, 34, 55, 115, 119, 120, 142, 148, 149], "celledg": [3, 32, 49], "colorbar_shrink": [3, 32], "colorbar_label": 3, "colorbar_tick": 3, "colorbar_tick_label": 3, "colorbar_extend": [3, 136], "colorbar_kwarg": [3, 127], "stand": [4, 132], "conserv": [4, 5, 6, 17, 18, 19, 98, 104, 106, 128, 141, 167, 170], "law": [4, 17, 63, 151, 170], "packag": [4, 27, 30, 31, 38, 39, 55, 59, 60, 67, 77, 78, 81, 85, 86, 88, 94, 96, 98, 100, 101, 103, 105, 108, 110, 111, 118, 129, 130, 165, 168], "wa": [4, 5, 6, 14, 19, 21, 22, 27, 31, 32, 34, 35, 36, 37, 42, 49, 52, 54, 58, 59, 66, 68, 70, 71, 75, 82, 99, 103, 104, 106, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 139, 142, 144, 161, 162, 164], "initi": [4, 5, 7, 12, 13, 18, 19, 24, 27, 32, 36, 37, 47, 48, 49, 51, 52, 55, 59, 64, 67, 71, 72, 75, 77, 78, 84, 86, 87, 88, 89, 91, 92, 94, 95, 97, 98, 102, 103, 104, 106, 107, 109, 112, 115, 124, 127, 130, 132, 140, 143, 148, 149, 150, 152, 154, 158, 162, 164], "develop": [4, 6, 7, 12, 13, 19, 20, 24, 25, 45, 52, 56, 58, 61, 62, 65, 70, 71, 81, 85, 86, 89, 96, 101, 104, 105, 111, 113, 116, 118, 127, 128, 130, 132, 135, 136, 137, 140, 143, 144, 150], "linear": [4, 5, 17, 18, 19, 32, 36, 37, 47, 49, 55, 72, 75, 82, 88, 92, 104, 118, 128, 140, 141, 142], "nonlinear": [4, 5, 17, 52, 92, 140, 148, 170], "hyperbol": [4, 5, 6, 17, 18, 19, 45, 78, 89, 96, 101, 102, 108, 140, 148, 151, 167, 170], "system": [4, 16, 17, 18, 19, 25, 39, 40, 48, 55, 56, 62, 63, 67, 76, 77, 86, 96, 97, 98, 99, 101, 102, 105, 108, 111, 116, 118, 140, 148, 150, 152, 160, 167, 170], "focu": [4, 48], "high": [4, 17, 34, 52, 55, 70, 72, 75, 78, 89, 96, 104, 140, 143, 144, 166, 167], "resolut": [4, 6, 17, 32, 34, 36, 42, 47, 64, 72, 75, 94, 104, 108, 109, 119, 123, 127, 128, 135, 140, 143, 162, 164, 166, 167], "godunov": [4, 94, 104, 148, 150, 152, 167], "method": [4, 5, 7, 17, 19, 34, 36, 37, 41, 45, 47, 57, 70, 72, 82, 84, 88, 91, 92, 94, 99, 103, 104, 109, 115, 116, 123, 140, 147, 148, 149, 150, 152, 158, 161, 162, 164, 167], "framework": [4, 86, 89, 124, 125], "applic": [4, 6, 15, 16, 18, 19, 21, 22, 24, 25, 26, 30, 31, 36, 37, 38, 39, 40, 44, 45, 46, 47, 48, 50, 59, 61, 62, 67, 70, 76, 77, 84, 93, 94, 95, 96, 98, 104, 109, 112, 114, 115, 116, 118, 119, 122, 123, 125, 126, 127, 129, 130, 140, 142, 144, 145, 148, 151, 156, 157, 162, 164, 165, 167, 168], "finit": [4, 17, 34, 36, 45, 49, 57, 63, 70, 71, 72, 75, 104, 130, 142, 151, 161, 162, 167], "volum": [4, 17, 31, 34, 36, 45, 49, 57, 63, 70, 71, 72, 96, 130, 142, 149, 151, 161, 162, 167], "riemann": [4, 5, 8, 22, 24, 25, 30, 31, 48, 59, 62, 67, 78, 86, 88, 94, 95, 104, 105, 106, 108, 111, 146, 148, 150, 152, 156, 157, 170], "solver": [4, 5, 6, 22, 24, 25, 27, 30, 48, 49, 60, 61, 62, 67, 85, 86, 87, 91, 94, 95, 98, 106, 118, 121, 123, 125, 126, 127, 128, 129, 130, 132, 137, 148, 150, 152, 156, 157, 170], "resolv": [4, 34, 36, 55, 58, 62, 113, 127, 144], "jump": [4, 5, 71, 84, 94, 104, 125, 148, 170], "discontinu": [4, 104, 170], "interfac": [4, 21, 24, 71, 86, 89, 92, 96, 97, 102, 104, 109, 140, 167, 168, 170], "wave": [4, 5, 6, 16, 17, 18, 27, 34, 42, 48, 49, 52, 55, 56, 75, 92, 94, 96, 101, 102, 104, 115, 123, 125, 126, 132, 141, 142, 143, 148, 149, 150, 151, 152, 154, 167], "propag": [4, 5, 6, 17, 18, 19, 27, 32, 49, 52, 55, 56, 75, 94, 96, 104, 115, 125, 140], "neighbor": [4, 18, 19, 36, 42, 70, 72, 115, 125, 144, 149, 150, 164], "formul": [4, 5, 19, 52, 68, 140, 148], "allow": [4, 6, 13, 24, 29, 30, 31, 34, 36, 37, 41, 42, 47, 48, 51, 54, 55, 57, 58, 62, 68, 70, 71, 75, 76, 78, 81, 82, 91, 96, 97, 98, 104, 106, 109, 110, 111, 115, 116, 119, 120, 123, 124, 125, 126, 127, 129, 130, 132, 135, 136, 137, 140, 142, 148, 150, 151, 152, 153, 158, 162, 164, 166], "easi": [4, 6, 11, 31, 41, 62, 71, 89, 98, 99, 100, 142, 153, 167], "extens": [4, 17, 19, 24, 26, 30, 32, 52, 55, 58, 62, 67, 71, 89, 96, 97, 109, 125, 126, 132, 148, 160, 164, 170], "problem": [4, 5, 7, 16, 17, 18, 19, 22, 26, 27, 29, 30, 31, 38, 39, 42, 45, 48, 49, 62, 66, 70, 71, 72, 75, 78, 82, 85, 87, 88, 93, 95, 96, 99, 102, 104, 107, 111, 116, 119, 120, 122, 123, 126, 130, 132, 136, 137, 140, 142, 144, 148, 149, 150, 151, 152, 153, 154, 161, 165], "algorithm": [4, 7, 19, 27, 34, 41, 42, 48, 56, 88, 94, 96, 97, 104, 108, 115, 127, 140, 142, 148, 150, 152, 164], "brief": [4, 59, 141, 151], "subroutin": [4, 6, 9, 16, 24, 34, 36, 67, 115, 123, 140, 148, 149, 161, 167, 170], "equat": [4, 5, 16, 17, 18, 27, 38, 39, 48, 49, 52, 64, 68, 82, 87, 88, 89, 91, 96, 97, 98, 101, 104, 105, 106, 118, 120, 123, 125, 127, 128, 140, 148, 150, 151, 152, 154, 162, 167, 170], "solv": [4, 5, 8, 16, 17, 18, 19, 22, 28, 38, 39, 49, 52, 60, 62, 64, 87, 89, 91, 94, 96, 101, 102, 105, 118, 128, 140, 141, 148, 162, 167, 170], "adapt": [4, 7, 17, 19, 32, 42, 49, 56, 57, 70, 71, 78, 88, 115, 127, 130, 132, 140, 142, 147, 148, 149, 151, 167], "mesh": [4, 7, 17, 19, 35, 49, 56, 70, 71, 78, 81, 88, 115, 130, 147, 148, 167], "amrclaw": [4, 5, 6, 12, 15, 16, 19, 21, 22, 24, 25, 26, 30, 38, 39, 41, 42, 44, 46, 47, 48, 50, 56, 59, 60, 61, 62, 64, 70, 71, 76, 77, 78, 85, 96, 97, 105, 111, 112, 115, 116, 139, 140, 142, 145, 146, 148, 151, 156, 157, 160, 161, 165], "detail": [4, 5, 10, 16, 24, 25, 27, 28, 30, 31, 32, 34, 36, 38, 39, 41, 44, 47, 50, 52, 55, 58, 61, 62, 64, 65, 66, 70, 71, 75, 78, 82, 86, 91, 92, 93, 94, 96, 97, 98, 99, 100, 101, 102, 104, 114, 115, 116, 120, 125, 127, 132, 135, 140, 142, 147, 148, 151, 153, 158, 162, 165, 166, 167, 170], "content": [4, 6, 25, 37, 45, 55, 59, 77, 78, 89, 96, 151, 162, 167, 168], "routin": [4, 5, 6, 16, 18, 19, 22, 27, 29, 32, 34, 38, 39, 47, 48, 49, 50, 55, 56, 66, 71, 72, 76, 77, 78, 81, 84, 86, 89, 91, 94, 97, 100, 101, 104, 106, 107, 115, 118, 119, 120, 123, 125, 127, 128, 130, 140, 144, 148, 150, 152, 158, 164, 165, 167, 168, 170], "special": [4, 7, 16, 48, 50, 55, 65, 78, 86, 97, 115, 135, 142, 164], "depth": [4, 5, 16, 17, 18, 19, 24, 32, 34, 35, 37, 42, 47, 48, 49, 52, 68, 72, 75, 81, 83, 141, 143, 144, 151, 162], "averag": [4, 6, 15, 17, 18, 19, 34, 42, 48, 49, 52, 53, 57, 71, 72, 102, 106, 120, 132, 140, 144, 145, 162, 164, 167], "geophys": [4, 16, 17, 25, 48, 52, 78, 148], "flow": [4, 16, 17, 25, 34, 35, 48, 50, 52, 78, 96, 113, 118, 130, 135, 140, 148, 151, 162, 167], "geoclaw": [4, 7, 12, 17, 18, 19, 25, 26, 30, 31, 32, 34, 35, 36, 37, 39, 41, 44, 46, 47, 56, 57, 59, 60, 61, 62, 63, 64, 68, 70, 72, 75, 77, 78, 81, 85, 96, 105, 111, 113, 114, 116, 139, 140, 141, 143, 144, 146, 148, 149, 154, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167], "parallel": [4, 24, 25, 47, 76, 87, 93, 95, 96, 98, 101, 103, 105, 109, 115, 116, 118, 125, 149], "ten": [4, 78], "thousand": [4, 78], "core": [4, 12, 78, 116, 127, 137], "wish": [4, 13, 14, 15, 24, 31, 38, 39, 52, 55, 62, 71, 80, 81, 96, 101, 104, 105, 107, 111, 113, 115, 125, 145, 153, 156, 157, 165], "discrib": 4, "book": [4, 12, 17, 27, 31, 46, 85, 103, 140], "levequ": [4, 16, 17, 26, 32, 56, 78, 92, 94, 96, 104, 110, 140, 148, 167, 170], "fvmhp": [4, 12, 16, 17, 27, 46, 78, 140, 148, 167, 170], "virtual": [4, 13, 27, 29, 106], "were": [4, 6, 14, 19, 22, 34, 45, 47, 58, 64, 67, 71, 72, 89, 115, 118, 119, 125, 128, 132, 135, 136, 137, 142, 144, 154, 162], "4": [4, 7, 8, 9, 13, 16, 17, 20, 25, 27, 30, 32, 34, 35, 36, 39, 41, 42, 44, 45, 47, 48, 52, 55, 57, 58, 59, 66, 67, 68, 70, 71, 72, 76, 77, 81, 82, 84, 95, 96, 97, 98, 99, 101, 102, 104, 105, 109, 111, 115, 116, 118, 119, 124, 127, 132, 133, 135, 137, 139, 142, 148, 149, 150, 151, 152, 160, 161, 162, 164, 169], "3": [4, 6, 7, 15, 16, 19, 22, 24, 26, 27, 32, 34, 35, 36, 39, 41, 45, 47, 48, 55, 57, 59, 62, 63, 68, 71, 72, 75, 77, 82, 84, 85, 88, 91, 92, 94, 97, 98, 99, 102, 103, 104, 106, 110, 111, 115, 125, 127, 130, 136, 138, 140, 142, 145, 148, 149, 150, 151, 152, 160, 161, 162, 164, 167, 170], "pointer": [4, 16, 18, 19, 58, 75, 81, 84, 104, 109, 123], "code": [4, 5, 6, 7, 8, 12, 14, 16, 21, 22, 23, 24, 25, 26, 29, 31, 34, 35, 36, 37, 38, 39, 41, 43, 44, 45, 47, 48, 49, 52, 54, 56, 57, 58, 60, 65, 66, 67, 68, 74, 75, 76, 77, 78, 80, 82, 84, 85, 86, 88, 89, 94, 96, 97, 98, 99, 101, 104, 105, 108, 110, 111, 114, 117, 118, 119, 120, 123, 124, 125, 126, 127, 128, 129, 130, 132, 137, 139, 140, 141, 142, 146, 148, 149, 150, 151, 152, 153, 158, 160, 161, 162], "bibliographi": [4, 27], "paper": [4, 5, 6, 16, 19, 32, 48, 58, 92, 96], "distribut": [4, 12, 13, 31, 32, 58, 65, 75, 78, 86, 104, 110, 130], "under": [4, 7, 24, 34, 36, 40, 55, 56, 58, 61, 65, 67, 81, 86, 94, 96, 116, 125, 127, 138], "term": [4, 18, 19, 27, 48, 49, 52, 65, 75, 89, 94, 95, 104, 115, 118, 126, 127, 136, 137, 141, 148, 150, 151, 152, 156, 157], "berkelei": [4, 65, 86], "bsd": [4, 65, 86, 127], "contribut": [4, 26, 27, 61, 86, 89, 96, 101, 104, 113, 116], "its": [4, 6, 13, 18, 19, 24, 31, 34, 42, 52, 55, 65, 67, 70, 75, 77, 86, 91, 92, 93, 94, 96, 101, 103, 104, 106, 109, 115, 150, 164, 170], "incept": 4, "1994": [4, 65], "major": [4, 24, 59, 86, 89, 117, 119, 120, 121, 126, 128, 133, 136, 137], "design": [4, 29, 30, 55, 86, 88, 108, 142, 166], "made": [4, 19, 20, 24, 30, 32, 37, 62, 103, 106, 118, 119, 120, 125, 127, 130, 132, 135, 136, 137, 142, 144, 151, 159, 162, 164, 167], "individu": [4, 24, 25, 55, 63, 66, 67, 71, 94, 115, 116, 158], "randal": [4, 17, 96], "univers": [4, 17, 26, 58, 65, 86, 103], "washington": [4, 17, 26, 58, 65, 129, 142, 164], "rjlevequ": [4, 19, 30, 31], "marsha": [4, 6, 17], "berger": [4, 6, 17], "courant": [4, 6, 49, 115, 126, 148, 149, 150, 152], "institut": 4, "nyu": 4, "mjberger": 4, "jan": [4, 59], "olav": 4, "langseth": [4, 17], "norwegian": 4, "defenc": 4, "research": [4, 17, 48, 52, 86, 104, 114], "establish": 4, "david": [4, 17, 86, 96, 104], "georg": [4, 17, 32], "usg": [4, 32, 166], "cascad": 4, "volcano": 4, "observatori": 4, "dlgeorg": 4, "ketcheson": [4, 17, 79, 86, 96, 104], "kaust": [4, 26], "ketch": 4, "kyle": [4, 17, 86, 92, 96, 97, 102], "mandli": [4, 17, 86, 92, 96, 97, 102], "ut": 4, "austin": 4, "contributor": [4, 26, 65, 96], "aron": [4, 17, 86, 96], "ahmadia": [4, 17, 86, 96], "amal": [4, 17, 86, 96], "alghamdi": [4, 17, 86, 96], "ghamdi": 4, "ian": 4, "bollig": 4, "bolliger32": 4, "peter": 4, "blossei": 4, "donna": [4, 17], "calhoun": [4, 17, 55], "donnabois": 4, "ond\u0159ej": 4, "\u010dert\u00edk": 4, "certik": [4, 86], "brisa": 4, "davi": [4, 17], "brisadavi": [4, 128], "gradi": [4, 17, 86], "lemoin": [4, 17, 86], "gradylemoin": 4, "sorin": 4, "mitran": [4, 17], "matteo": [4, 17, 86, 96], "parsani": [4, 17, 86, 96], "mparsani": 4, "xinsheng": [4, 56], "qin": [4, 56], "xinshengqin": [4, 56], "avi": 4, "schwarzschild": 4, "aks2203": 4, "andi": 4, "terrel": 4, "aterrel": 4, "chri": 4, "vogl": 4, "cjvogl": 4, "numer": [4, 17, 55, 110, 128], "student": 4, "toward": [4, 32], "bug": [4, 8, 12, 24, 26, 44, 55, 68, 76, 82, 86, 118, 122, 123, 124, 125, 127, 132, 133, 134, 137], "suggest": [4, 18, 19, 26, 31, 51, 57, 58, 60, 62, 84, 85, 110, 138, 140, 151, 169], "improv": [4, 13, 24, 26, 34, 36, 55, 58, 97, 110, 118, 119, 120, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 148], "explor": [4, 36, 63, 82, 84], "thank": [4, 96], "pleas": [4, 26, 30, 58, 60, 61, 62, 86, 88, 91, 93, 96, 97, 99, 101, 103, 104, 105, 107, 113, 127, 132, 138, 140, 158], "itself": [4, 75, 81, 110, 130, 140, 151, 164], "well": [4, 6, 19, 30, 35, 48, 49, 55, 56, 58, 62, 63, 70, 75, 76, 77, 78, 81, 84, 85, 103, 104, 113, 126, 127, 130, 135, 141, 144, 148, 149, 156, 157, 158, 167, 170], "citat": [4, 19, 59], "similar": [4, 13, 16, 18, 30, 34, 36, 39, 47, 49, 55, 64, 88, 89, 97, 101, 104, 108, 127, 132, 151, 158, 159, 160, 162], "team": [4, 26, 65], "2020": [4, 26, 27, 58, 65, 110, 113, 130, 131, 132, 138, 140], "7": [4, 6, 14, 31, 34, 36, 41, 42, 47, 51, 58, 64, 68, 70, 77, 82, 85, 94, 105, 111, 115, 132, 138, 142, 143, 144, 149, 150], "http": [4, 12, 13, 17, 19, 26, 28, 30, 31, 32, 42, 51, 55, 56, 58, 59, 61, 62, 65, 70, 75, 85, 86, 89, 90, 97, 99, 101, 110, 111, 118, 122, 124, 125, 126, 128, 129, 132, 133, 134, 135, 136, 137, 138, 141, 158, 164], "www": [4, 13, 17, 32, 42, 48, 58, 65, 70, 86, 89, 94, 97, 99, 118, 126, 128, 135, 136, 158, 164], "org": [4, 17, 19, 48, 56, 58, 59, 65, 86, 89, 90, 94, 97, 99, 110, 111, 118, 124, 126, 128, 132, 133, 134, 135, 136, 137, 164], "doi": [4, 17, 56, 59, 61, 118, 130, 131, 132, 133, 134, 135, 136, 137, 138], "10": [4, 17, 18, 19, 30, 32, 34, 36, 42, 49, 55, 56, 57, 59, 82, 88, 91, 94, 115, 124, 125, 127, 130, 131, 132, 133, 134, 135, 136, 137, 138, 142, 148, 149, 150, 152, 154, 162], "5281": [4, 59, 118, 130, 131, 132, 133, 134, 135, 136, 137, 138], "zenodo": [4, 61, 118, 130, 131, 132, 133, 134, 135, 136, 137, 138], "4025432": [4, 131, 138], "here": [4, 13, 16, 18, 19, 31, 36, 41, 42, 52, 59, 62, 63, 70, 78, 82, 84, 88, 91, 96, 97, 99, 101, 102, 107, 108, 111, 113, 115, 123, 140, 141, 142, 159, 164, 170], "bibtex": [4, 59], "misc": [4, 129, 131], "url": [4, 12, 17, 55, 59, 127, 128, 162, 164], "year": [4, 17, 24, 55, 63, 96, 117, 128, 158], "releas": [4, 19, 20, 24, 27, 30, 31, 46, 49, 55, 60, 61, 62, 90, 96, 97, 104, 105, 110], "refer": [4, 5, 19, 22, 32, 34, 35, 36, 38, 39, 41, 48, 50, 55, 59, 66, 67, 71, 75, 88, 92, 94, 97, 98, 102, 104, 106, 111, 113, 127, 129, 139, 140, 142, 151, 158, 162, 164, 166, 167], "particular": [4, 6, 12, 22, 24, 30, 32, 34, 44, 47, 48, 50, 52, 55, 56, 59, 65, 66, 67, 71, 78, 82, 83, 85, 86, 88, 102, 103, 104, 106, 108, 113, 114, 115, 116, 118, 120, 123, 124, 125, 126, 127, 129, 130, 132, 147, 158, 159, 170], "obtain": [4, 6, 12, 34, 46, 47, 49, 50, 52, 62, 63, 72, 97, 98, 99, 115, 118, 132, 140, 144, 153, 162, 170], "your": [4, 6, 15, 16, 18, 19, 21, 22, 26, 27, 28, 36, 38, 40, 44, 47, 57, 58, 59, 60, 61, 62, 76, 81, 82, 84, 86, 87, 88, 89, 90, 93, 95, 96, 97, 98, 107, 108, 110, 111, 112, 113, 115, 116, 119, 127, 137, 140, 145, 146, 156, 157, 162, 165, 167], "multipl": [4, 5, 6, 13, 25, 30, 34, 35, 42, 47, 81, 88, 94, 97, 98, 109, 111, 116, 119, 125, 129, 139, 140, 149, 158, 159], "past": [4, 23, 27, 58, 64, 70, 103, 125, 128, 132, 138, 142, 143, 151], "17605": [4, 59, 138], "osf": [4, 138], "io": [4, 58, 59, 85, 98, 103, 138], "kmw6h": [4, 59, 138], "recent": [4, 13, 24, 29, 32, 49, 54, 58, 61, 66, 68, 76, 82, 84, 85, 118, 124, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 140, 154, 166], "articl": [4, 17, 96, 153], "l": [4, 7, 17, 34, 43, 61, 115, 140, 146, 150], "hadjimichael": [4, 17, 86], "2016": [4, 17, 26, 58], "build": [4, 17, 30, 31, 58, 59, 62, 71, 89, 99, 109, 126, 137, 142], "open": [4, 13, 17, 27, 30, 31, 32, 51, 55, 63, 81, 86, 90, 94, 97, 109, 142, 146, 166, 168], "ecosystem": [4, 17], "pde": [4, 5, 17, 60, 61, 62, 78, 85, 96, 108, 148, 167], "peerj": [4, 17], "scienc": [4, 17, 86], "7717": [4, 17], "c": [4, 16, 17, 30, 31, 32, 44, 55, 63, 65, 82, 86, 88, 89, 94, 102, 107, 108, 140], "68": [4, 17], "mandli2016clawpack": [4, 17], "yianni": [4, 17, 86], "journal": [4, 17, 56, 96, 153], "e68": [4, 17], "publish": [4, 17, 58, 96], "inc": [4, 17, 71], "least": [4, 5, 6, 13, 37, 47, 55, 63, 64, 70, 71, 107, 115, 116, 124, 125, 132, 148, 150, 154, 162, 164], "regard": [4, 41, 124, 158], "click": [4, 12, 13, 20, 30, 55, 58, 59, 116, 118, 126, 135, 136, 137, 138], "link": [4, 11, 13, 15, 17, 20, 21, 22, 26, 27, 30, 34, 36, 44, 45, 48, 55, 56, 57, 58, 59, 61, 63, 110, 111, 112, 118, 126, 135, 136, 137, 138, 140, 141, 143, 145, 152, 156, 157, 162, 166], "classic": [4, 6, 12, 15, 16, 21, 22, 24, 25, 26, 30, 44, 45, 46, 50, 59, 60, 61, 62, 67, 74, 76, 77, 78, 85, 86, 88, 91, 93, 94, 95, 96, 97, 101, 111, 112, 116, 139, 140, 145, 146, 149, 151, 157, 165, 167], "2d": [4, 7, 8, 15, 16, 18, 21, 24, 27, 29, 32, 34, 36, 37, 41, 42, 48, 49, 51, 56, 63, 71, 76, 81, 86, 88, 94, 96, 100, 104, 110, 112, 115, 118, 123, 125, 126, 127, 128, 129, 132, 136, 141, 142, 144, 145, 148, 149, 152, 154, 156, 157, 164, 168, 170], "leveque97": [4, 17], "3d": [4, 7, 15, 19, 24, 32, 71, 76, 81, 86, 96, 100, 104, 112, 115, 118, 119, 121, 123, 124, 125, 128, 136, 140, 142, 145, 148, 149, 156, 157, 168, 170], "langsethleveque00": [4, 17], "amr": [4, 7, 8, 16, 18, 19, 22, 25, 27, 29, 30, 34, 36, 37, 41, 47, 48, 49, 56, 63, 71, 72, 73, 77, 78, 81, 86, 94, 118, 124, 126, 127, 128, 130, 132, 135, 144, 147, 148, 150, 152, 161, 167], "bergerleveque98": [4, 6, 7, 17], "f": [4, 5, 6, 16, 17, 18, 22, 24, 27, 29, 30, 33, 66, 67, 89, 91, 97, 98, 101, 102, 104, 106, 107, 109, 119, 123, 126, 127, 128, 132, 141, 148, 149, 150, 152, 164, 165, 167], "balelevmitross02": [4, 17, 148, 170], "bergergeorgelevequemandli11": [4, 17], "levequegeorgeberg": [4, 17], "order": [4, 5, 6, 13, 16, 17, 18, 19, 31, 32, 34, 36, 47, 52, 57, 62, 64, 67, 70, 71, 72, 75, 77, 78, 82, 84, 85, 86, 88, 91, 92, 94, 96, 97, 98, 100, 101, 104, 108, 109, 110, 111, 115, 118, 123, 127, 132, 136, 140, 142, 144, 147, 148, 149, 150, 152, 158, 162, 164, 165, 167, 170], "sharpclaw": [4, 25, 27, 78, 86, 93, 95, 96, 101, 119, 140], "ketparlev13": [4, 17, 78, 96, 140], "ketchesonmandliet": [4, 17], "support": [4, 8, 13, 18, 19, 24, 36, 37, 41, 44, 49, 52, 55, 60, 61, 73, 75, 77, 85, 86, 88, 89, 94, 97, 98, 100, 102, 104, 115, 118, 123, 125, 126, 127, 128, 132, 133, 135, 136, 140, 142, 148, 149, 151, 158, 159, 162, 165, 168], "part": [4, 5, 19, 24, 26, 32, 36, 48, 51, 52, 62, 63, 64, 86, 89, 99, 105, 106, 108, 110, 114, 116, 118, 129, 167], "nsf": 4, "grant": [4, 86], "dm": 4, "8657319": 4, "9204329": 4, "9303404": 4, "9505021": 4, "96226645": 4, "9803442": 4, "0106511": 4, "cm": [4, 32, 75, 82, 142], "0245206": 4, "0609661": 4, "0914942": 4, "1216732": 4, "ear": 4, "1331412": 4, "cmmi": 4, "1536198": 4, "doe": [4, 5, 11, 16, 19, 22, 29, 30, 36, 42, 43, 49, 52, 55, 57, 58, 62, 71, 78, 82, 85, 94, 103, 106, 109, 115, 116, 120, 125, 129, 132, 135, 139, 140, 141, 144, 158, 164, 165, 167], "de": [4, 17, 86, 96, 142], "fg06": 4, "93er25181": 4, "fg03": 4, "96er25292": 4, "fg02": 4, "88er25053": 4, "92er25139": 4, "00er2592": 4, "fc02": 4, "01er25474": 4, "afosr": 4, "f49620": 4, "94": 4, "0132": 4, "nih": 4, "5r01ar53652": 4, "onr": 4, "n00014": 4, "09": [4, 94, 102, 161], "0649": 4, "council": 4, "nfr": 4, "through": [4, 13, 30, 36, 38, 39, 47, 49, 52, 55, 70, 71, 78, 81, 89, 101, 106, 108, 109, 111, 114, 115], "program": [4, 50, 52, 67, 78], "101039": 4, "420": 4, "scientif": [4, 17, 85, 96, 99, 110, 137], "divis": [4, 55], "nation": [4, 52, 158], "center": [4, 5, 29, 32, 34, 35, 36, 37, 42, 47, 55, 57, 63, 72, 75, 88, 94, 101, 102, 108, 115, 127, 142, 144, 149, 150, 151, 158, 159, 162, 167], "atmospher": 4, "ncar": 4, "boe": 4, "professorship": 4, "founder": 4, "depart": [4, 158], "mathemat": 4, "comot": 4, "fellowship": 4, "king": [4, 86], "abdullah": [4, 86], "technologi": [4, 86], "contract": [4, 65, 86], "state": [4, 13, 17, 19, 27, 30, 58, 75, 82, 88, 89, 91, 94, 96, 97, 98, 99, 101, 102, 103, 104, 107, 108, 116, 132, 133, 140, 141, 142, 148, 162, 170], "emerg": 4, "manag": [4, 12, 13, 55, 98, 158], "tsunami": [4, 5, 16, 17, 19, 26, 27, 34, 36, 42, 48, 50, 56, 68, 75, 98, 115, 119, 122, 128, 129, 135, 142, 143, 144, 151, 159, 162], "hazard": [4, 34, 48, 68, 143], "mitig": [4, 52], "nasa": 4, "asteroid": [4, 19], "threat": 4, "assess": [4, 52, 143], "project": [4, 5, 26, 27, 32, 52, 55, 58, 59, 75, 86, 90, 125, 126, 137, 149, 164], "planetari": 4, "defens": 4, "offic": 4, "opinion": 4, "conclus": [4, 55], "express": [4, 32, 65, 86, 105, 142], "materi": [4, 45, 65, 75, 86, 113, 130], "those": [4, 6, 10, 12, 18, 19, 24, 26, 52, 55, 56, 59, 70, 78, 88, 89, 91, 98, 101, 106, 115, 116, 119, 130, 132, 138, 139, 153, 160, 164, 167], "necessarili": [4, 42, 77, 97, 116], "agenc": [4, 60, 158, 159], "approach": [5, 7, 13, 18, 19, 30, 31, 41, 47, 49, 58, 61, 74, 81, 89, 96, 99, 101, 109, 115, 123, 125, 126, 128, 140, 141, 147, 167, 170], "introduc": [5, 16, 21, 34, 35, 36, 37, 42, 49, 82, 118, 130, 132, 139, 142, 144, 149, 170], "6": [5, 19, 24, 27, 30, 32, 34, 36, 41, 42, 44, 47, 51, 52, 55, 58, 63, 68, 70, 71, 72, 76, 82, 95, 96, 97, 101, 102, 104, 105, 110, 111, 115, 130, 138, 140, 142, 148, 149, 162, 169], "what": [5, 6, 9, 13, 14, 18, 19, 24, 27, 30, 32, 33, 34, 41, 49, 52, 54, 55, 58, 59, 61, 62, 63, 66, 67, 70, 71, 72, 77, 81, 88, 91, 95, 103, 106, 108, 111, 114, 115, 116, 124, 142, 143, 147, 148, 150, 151, 152, 153, 162, 164, 166, 167], "forward": [5, 64, 104, 115, 128, 167], "becaus": [5, 18, 19, 24, 29, 34, 36, 42, 55, 59, 70, 72, 97, 98, 99, 119, 140, 143, 148], "impact": [5, 19, 75], "autonom": 5, "shift": [5, 32, 52, 57], "perform": [5, 6, 17, 24, 29, 52, 55, 57, 76, 78, 81, 82, 91, 94, 97, 101, 104, 109, 116, 129, 132, 139, 140, 146, 151, 160], "snapshot": [5, 30, 98, 128], "save": [5, 13, 27, 28, 35, 36, 37, 42, 54, 63, 77, 91, 95, 104, 124, 125, 127, 132, 139, 159, 164], "space": [5, 6, 7, 16, 17, 27, 32, 34, 35, 36, 37, 47, 48, 51, 55, 57, 75, 77, 94, 98, 101, 115, 118, 123, 135, 139, 142, 148, 149, 150, 151, 152, 162, 164, 167], "interpol": [5, 6, 16, 19, 27, 32, 35, 37, 42, 47, 48, 57, 63, 64, 71, 75, 82, 118, 125, 132, 135, 142, 143, 144, 158, 159, 164], "regrid": [5, 10, 115, 119, 120, 125, 128, 129, 149, 150, 161], "davisleveque2018": [5, 17], "davis2018": [5, 17], "discuss": [5, 18, 19, 26, 30, 32, 52, 57, 70, 75, 97, 108, 110, 111, 115, 118, 125, 127, 140, 151, 154, 170], "when": [5, 14, 15, 16, 19, 22, 30, 31, 32, 34, 36, 37, 42, 43, 44, 47, 49, 53, 54, 55, 57, 58, 59, 61, 62, 64, 68, 70, 71, 75, 76, 77, 78, 81, 82, 84, 88, 95, 96, 97, 99, 100, 104, 107, 111, 115, 116, 118, 119, 120, 122, 124, 125, 126, 130, 132, 134, 135, 136, 140, 142, 143, 144, 145, 147, 148, 149, 150, 151, 152, 153, 158, 162, 164, 165, 166, 167, 168, 170], "accur": [5, 18, 19, 49, 52, 72, 75, 96, 104, 132, 148, 167, 170], "entir": [5, 6, 36, 41, 52, 55, 63, 70, 72, 75, 76, 78, 88, 98, 103, 113, 115, 120, 142, 164], "domain": [5, 6, 16, 17, 35, 36, 41, 42, 49, 52, 55, 58, 63, 75, 77, 87, 88, 89, 91, 99, 101, 103, 106, 113, 115, 118, 135, 149, 150, 151, 152, 162], "dimens": [5, 6, 7, 16, 22, 24, 27, 47, 48, 51, 57, 63, 71, 72, 88, 89, 91, 97, 99, 101, 102, 103, 106, 108, 115, 118, 127, 130, 140, 148, 149, 150, 152, 164, 167], "int_a": 5, "phi": 5, "dx": [5, 15, 17, 32, 34, 35, 36, 51, 57, 64, 75, 77, 89, 94, 98, 123, 127, 145, 162, 164, 167], "leq": [5, 142], "backward": [5, 30, 32, 35, 51, 63, 75, 77, 97, 120, 121, 136, 164], "small": [5, 16, 19, 36, 42, 47, 68, 70, 115, 116, 118, 119, 124, 139, 148, 150, 151, 162, 164, 166], "sai": [5, 13, 16, 30, 63, 107, 115], "x_1": [5, 142], "x_2": [5, 142], "might": [5, 10, 13, 14, 16, 24, 30, 31, 37, 38, 39, 40, 41, 42, 51, 55, 57, 58, 62, 67, 70, 71, 72, 76, 82, 85, 88, 98, 102, 111, 113, 114, 115, 119, 148, 149, 162, 164, 166, 167], "box": [5, 32, 35, 55, 63, 142, 164], "interv": [5, 47, 49, 51, 88, 108, 115, 132, 142, 148, 151], "elsewher": [5, 26, 42, 96, 142], "sharpli": 5, "peak": 5, "gaussian": [5, 88, 108, 152], "final": [5, 32, 37, 44, 58, 64, 71, 75, 88, 91, 98, 108, 113, 119, 139, 141, 148, 150, 152, 164], "necessari": [5, 6, 13, 18, 19, 30, 36, 37, 38, 39, 50, 52, 55, 58, 59, 62, 63, 71, 75, 77, 78, 84, 88, 89, 94, 97, 118, 123, 125, 127, 139, 140, 147, 148, 149, 162, 165, 167], "place": [5, 16, 22, 26, 30, 32, 38, 39, 55, 58, 62, 66, 67, 74, 96, 98, 99, 101, 105, 111, 119, 125, 137, 167], "earlier": [5, 19, 22, 24, 32, 34, 41, 47, 57, 75, 88, 101, 119, 126, 139, 162, 164], "help": [5, 7, 9, 25, 26, 27, 30, 31, 42, 43, 53, 58, 60, 66, 81, 84, 96, 99, 105, 109, 116, 124, 130, 140, 153, 165], "identifi": [5, 38, 39, 42, 55, 70, 89, 115, 130, 158], "hat": 5, "given": [5, 19, 32, 42, 51, 55, 57, 63, 68, 71, 75, 92, 97, 99, 103, 104, 106, 109, 115, 132, 142, 143, 144, 151, 162, 164, 167], "t_r": 5, "reach": [5, 115, 139], "acoustics_1d_adjoint": 5, "acoustics_2d_adjoint": 5, "main": [5, 11, 12, 19, 21, 30, 42, 46, 58, 59, 70, 71, 78, 89, 91, 97, 101, 108, 109, 116, 118, 126, 135], "subdirectori": [5, 12, 22, 24, 25, 38, 39, 58, 59, 62, 66, 74, 84, 93, 98, 111, 116, 135, 147, 151, 153, 160, 164], "must": [5, 6, 13, 16, 18, 19, 22, 24, 30, 32, 34, 36, 42, 46, 49, 50, 55, 58, 61, 65, 66, 67, 70, 71, 75, 76, 77, 86, 89, 96, 97, 98, 101, 103, 104, 106, 107, 108, 109, 111, 115, 119, 123, 140, 142, 143, 144, 148, 149, 150, 151, 152, 158, 164, 165, 166, 167, 170], "makefil": [5, 6, 11, 14, 15, 16, 21, 22, 25, 27, 30, 36, 38, 39, 44, 58, 76, 78, 82, 84, 89, 95, 96, 115, 118, 119, 123, 125, 127, 128, 130, 136, 144, 145, 148, 150, 151, 152, 153, 156, 157, 162, 165, 167], "coeffici": [5, 68, 101, 102, 104, 106, 107, 108, 140, 151], "matric": [5, 140, 170], "transpos": 5, "vice": 5, "versa": 5, "q_t": [5, 101, 102, 104, 108, 167, 170], "q_x": [5, 102, 108, 170], "_x": [5, 42, 70, 102, 104, 164, 167, 170], "eigenvalu": 5, "unchang": [5, 71], "upon": [5, 106], "transform": [5, 44], "eigenvector": [5, 140, 170], "right": [5, 19, 32, 34, 65, 68, 75, 86, 94, 99, 101, 102, 106, 108, 132, 139, 140, 142, 170], "rp1_acoustics_variable_adjoint": 5, "f90": [5, 9, 15, 18, 19, 22, 33, 34, 36, 42, 47, 49, 56, 66, 67, 76, 77, 85, 101, 112, 115, 119, 123, 125, 127, 128, 129, 130, 132, 133, 136, 140, 141, 144, 145, 154, 156, 157, 162, 165, 167], "boundari": [5, 7, 19, 22, 27, 42, 55, 63, 67, 70, 75, 76, 89, 94, 102, 104, 108, 113, 120, 123, 127, 142, 148, 150, 152], "condit": [5, 7, 19, 22, 27, 65, 67, 78, 86, 87, 88, 89, 91, 98, 104, 112, 119, 120, 123, 127, 143, 148, 150, 151, 152], "adjust": [5, 13, 18, 19, 22, 34, 35, 48, 63, 77, 94, 98, 136, 139, 143, 148, 167], "principl": [5, 164, 167], "vanish": 5, "dure": [5, 24, 34, 42, 47, 63, 75, 78, 119, 143, 144, 150, 151, 152, 154, 162], "integr": [5, 24, 57, 64, 86, 96, 98, 104, 119, 120, 124, 150, 152, 161, 162, 167], "qinit": [5, 22, 24, 42, 48, 66, 67, 89, 132, 143, 144, 167], "setrun": [5, 6, 7, 8, 14, 16, 21, 22, 27, 34, 35, 36, 37, 38, 39, 41, 42, 43, 45, 48, 49, 50, 52, 63, 64, 66, 68, 70, 77, 78, 82, 96, 112, 113, 115, 119, 123, 124, 125, 128, 130, 132, 135, 136, 137, 139, 140, 143, 144, 154, 158, 162, 165, 167], "clawdata": [5, 19, 41, 49, 77, 119, 123, 139, 148, 149, 150, 151, 152], "tfinal": [5, 77, 88, 91, 108, 139, 148, 150, 152], "via": [5, 13, 24, 25, 26, 30, 31, 32, 36, 38, 39, 44, 47, 50, 52, 55, 58, 59, 61, 62, 64, 66, 70, 71, 75, 76, 78, 82, 85, 88, 94, 97, 100, 103, 105, 107, 111, 115, 116, 118, 127, 130, 140, 142, 146, 151, 153, 156, 157, 162, 164, 167], "num_output_tim": [5, 77, 88, 91, 98, 139, 148, 150, 152], "larg": [5, 6, 12, 19, 22, 36, 37, 38, 39, 42, 52, 55, 57, 58, 71, 76, 81, 96, 98, 99, 115, 116, 118, 124, 132, 135, 139, 142, 144, 148, 149, 164, 166], "frequent": [5, 22, 29, 36, 47, 64, 107, 124, 135], "enough": [5, 47, 49, 58, 64, 70, 149, 159, 161, 162], "them": [5, 13, 20, 24, 30, 31, 32, 34, 47, 51, 55, 58, 71, 78, 86, 88, 93, 97, 98, 99, 101, 109, 113, 116, 118, 120, 129, 135, 136, 137, 142, 155, 158, 164, 167], "reason": [5, 19, 49, 52, 55, 63, 75, 76, 78, 99, 101, 115, 148], "output_format": [5, 36, 37, 77, 91, 98, 135, 148, 150, 152], "binari": [5, 36, 44, 47, 59, 65, 86, 98, 100, 124, 135, 136, 139, 148, 164, 168], "manner": [5, 36, 42, 47, 55, 64, 70, 75, 81, 127, 144, 148, 156, 157, 162], "attribut": [5, 7, 18, 24, 32, 36, 37, 41, 47, 70, 75, 81, 83, 84, 88, 91, 94, 97, 99, 101, 103, 104, 115, 118, 119, 124, 128, 136, 139, 147, 148, 149, 151, 158, 164], "clawutil": [5, 11, 14, 21, 22, 25, 30, 43, 44, 54, 59, 60, 61, 66, 111, 116, 146, 148, 149, 150, 152, 164, 165], "clawrundata": [5, 47, 63, 128, 139, 148, 149, 150, 152], "adjointdata": [5, 128, 129], "ia": 5, "attribur": 5, "toler": [5, 34, 102, 109, 115, 116, 125, 149, 150, 151], "rundata": [5, 18, 19, 24, 34, 36, 41, 42, 47, 49, 63, 64, 115, 119, 130, 137, 139, 144, 148, 149, 150, 151, 152, 154], "use_adjoint": 5, "adjoint_outdir": 5, "abspath": [5, 41], "_output": [5, 13, 14, 34, 36, 38, 39, 47, 54, 64, 71, 82, 84, 93, 98, 100, 103, 124, 131, 165], "period": [5, 6, 16, 34, 66, 88, 101, 115, 118, 148, 150, 152], "t1": [5, 41, 47, 63, 64, 115, 132, 149, 150, 151], "t0": [5, 18, 19, 77, 139, 148, 150, 151, 152, 162], "t2": [5, 41, 47, 63, 64, 115, 132, 149, 150, 151], "addit": [5, 7, 13, 16, 17, 19, 25, 26, 30, 31, 34, 36, 39, 40, 41, 48, 49, 50, 63, 70, 75, 77, 78, 82, 83, 89, 92, 94, 96, 98, 104, 105, 106, 113, 115, 118, 123, 125, 126, 127, 128, 131, 132, 134, 135, 136, 140, 142, 148, 152, 158, 161, 162, 167, 168], "aux": [5, 6, 15, 22, 24, 29, 47, 57, 89, 96, 97, 98, 101, 103, 104, 106, 107, 119, 120, 125, 127, 140, 141, 145, 148, 149, 150, 151, 152, 167], "inner": [5, 115, 128], "product": [5, 32, 65, 86, 109, 115, 128], "amrdata": [5, 24, 34, 115, 130, 132, 149, 150, 151], "aux_typ": [5, 149, 150], "append": [5, 22, 34, 36, 41, 42, 47, 55, 64, 82, 91, 103, 115, 124, 125, 137, 139, 140, 150, 151], "num_aux": [5, 89, 97, 99, 101, 102, 106, 140, 148, 149, 150, 152, 167], "len": [5, 32, 37, 94, 150, 152, 164], "innerprod_index": 5, "base": [5, 6, 13, 19, 22, 23, 24, 30, 31, 32, 34, 35, 36, 48, 49, 51, 55, 56, 57, 58, 63, 64, 67, 68, 70, 71, 75, 78, 89, 91, 92, 94, 96, 97, 102, 103, 104, 106, 108, 109, 115, 117, 123, 126, 128, 132, 135, 136, 143, 148, 149, 150, 151, 152, 158, 164, 167, 170], "richardson": [5, 7, 24, 149, 150], "error": [5, 16, 22, 38, 39, 43, 55, 62, 71, 76, 82, 91, 96, 97, 98, 109, 115, 116, 128, 132, 137, 149, 150, 158, 165], "estimat": [5, 150], "flag_richardson": [5, 115, 124, 149, 150], "flag_richardson_tol": [5, 115, 149, 150], "1e": [5, 70, 152], "flag2refin": [5, 7, 24, 149, 150], "flag2refine_tol": [5, 115, 149, 150], "01": [5, 17, 42, 77, 94, 164], "we": [5, 6, 18, 19, 24, 26, 28, 34, 38, 39, 41, 42, 47, 52, 55, 57, 58, 59, 60, 62, 67, 70, 72, 75, 81, 84, 88, 89, 90, 91, 93, 94, 97, 98, 99, 100, 101, 104, 105, 106, 107, 108, 109, 110, 113, 116, 127, 130, 135, 137, 140, 141, 142, 164], "attempt": [5, 8, 11, 22, 35, 38, 39, 66, 97, 103, 109, 116, 119, 133, 158, 164, 165], "estim": [5, 68, 115, 149, 151], "step": [5, 6, 10, 16, 18, 19, 21, 30, 34, 36, 38, 39, 40, 47, 55, 58, 59, 64, 71, 77, 78, 81, 84, 86, 87, 88, 89, 91, 98, 101, 104, 106, 108, 113, 115, 118, 119, 124, 125, 135, 139, 140, 146, 148, 149, 150, 151, 152, 162, 170], "extrapol": [5, 7, 16, 24, 72, 101, 108, 127, 148, 149, 150, 152], "togeth": [5, 16, 30, 31, 32, 58, 60, 75, 115, 135], "experiment": [5, 86], "simpli": [5, 13, 19, 36, 38, 39, 40, 42, 47, 49, 55, 57, 66, 67, 70, 72, 88, 90, 91, 93, 98, 99, 105, 116, 118, 140, 142, 153, 158, 164, 167, 168], "magnitud": [5, 32, 115, 127, 151], "greater": [5, 34, 63, 68, 70, 105, 115, 139, 148, 149, 151], "model": [5, 12, 16, 17, 18, 19, 26, 27, 32, 34, 44, 48, 49, 50, 56, 57, 68, 98, 115, 124, 129, 130, 131, 142, 143, 144, 151, 154, 158, 159, 162], "davisleveque2016": [5, 17], "chile2010_adjoint": 5, "shallow": [5, 15, 16, 17, 18, 19, 27, 34, 36, 42, 48, 49, 52, 56, 70, 78, 89, 96, 112, 118, 120, 121, 123, 125, 127, 128, 136, 137, 140, 144, 145, 151, 156, 157, 162, 167], "water": [5, 16, 17, 18, 19, 27, 36, 42, 47, 48, 49, 50, 51, 52, 63, 70, 78, 81, 89, 96, 118, 120, 121, 125, 127, 128, 137, 140, 142, 143, 144, 151, 162, 164, 166, 167], "while": [5, 13, 16, 19, 32, 42, 55, 71, 75, 82, 84, 89, 94, 98, 99, 104, 109, 127, 140, 144, 151, 166], "suitabl": [5, 8, 16, 18, 19, 22, 48, 52, 55, 73, 77, 103, 114, 140, 143, 158, 164], "To": [5, 6, 13, 14, 18, 19, 20, 24, 27, 30, 31, 38, 39, 40, 41, 42, 43, 47, 50, 53, 55, 56, 59, 66, 69, 70, 71, 75, 76, 77, 82, 84, 85, 88, 90, 92, 93, 96, 97, 98, 99, 100, 101, 104, 105, 108, 111, 113, 114, 115, 116, 118, 123, 125, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 139, 143, 146, 148, 149, 153, 162, 168], "date": [5, 17, 30, 43, 51, 55, 58, 59, 66, 82, 158, 165], "across": [5, 115, 125, 162, 164], "ocean": [5, 16, 17, 19, 34, 49, 52, 55, 113, 115, 142, 151, 156, 157, 162], "wai": [5, 6, 13, 16, 19, 28, 30, 36, 38, 39, 41, 42, 47, 49, 55, 57, 58, 61, 62, 63, 65, 66, 82, 84, 85, 86, 88, 91, 93, 94, 99, 101, 103, 105, 108, 110, 111, 113, 114, 119, 125, 126, 127, 130, 137, 138, 140, 142, 147, 148, 155, 159, 162, 167, 169, 170], "target": [5, 62, 82, 89, 101, 130], "possibli": [5, 32, 36, 70, 88, 94, 111, 118, 124, 144], "deep": [5, 49, 70], "amplitud": [5, 125], "compar": [5, 18, 19, 24, 39, 47, 49, 52, 55, 59, 82, 98, 115, 116, 143, 149, 160, 166, 170], "essenti": [5, 57, 71, 104, 151, 162], "rest": [5, 24, 84, 113, 127, 143, 156, 157, 162, 164], "henc": [5, 36, 57, 58, 67, 72, 104, 110, 111, 115, 144], "take": [5, 6, 24, 29, 30, 32, 34, 37, 51, 58, 68, 70, 71, 75, 82, 88, 94, 101, 104, 108, 109, 110, 115, 116, 118, 122, 128, 136, 144, 148, 149, 150, 151, 164, 167, 170], "rpn2_geoclaw_adjoint_qwav": 5, "rpt2_geoclaw_adjoint_qwav": 5, "non": [5, 16, 59, 70, 78, 89, 101, 108, 128, 130, 148, 150, 152, 158, 170], "vector": [5, 24, 88, 92, 98, 106, 127, 135, 140, 141], "split": [5, 6, 76, 94, 97, 104, 123, 124, 132, 148, 149, 150, 152, 161, 167, 170], "flux": [5, 17, 34, 36, 37, 94, 102, 104, 140, 148, 170], "comment": [5, 11, 19, 26, 53, 59, 126, 135, 139], "rpn2": [5, 140], "basic": [6, 10, 12, 27, 32, 38, 40, 48, 61, 70, 71, 88, 94, 96, 97, 98, 102, 104, 116, 140, 141, 158, 170], "strategi": 6, "logic": [6, 16, 17, 34, 132, 151], "rectangular": [6, 7, 16, 17, 32, 34, 37, 41, 42, 48, 50, 63, 70, 94, 115, 127, 130, 135, 149, 151, 162], "too": [6, 19, 51, 55, 58, 59, 118, 124, 142, 150, 152, 154], "portion": [6, 36, 42, 55, 70, 89, 135, 161], "factor": [6, 55, 149, 151, 161, 164], "direct": [6, 8, 16, 24, 32, 34, 36, 38, 39, 47, 49, 51, 55, 59, 63, 65, 66, 71, 75, 76, 82, 86, 91, 101, 108, 115, 126, 140, 148, 149, 151, 164], "anisotrop": [6, 24], "perhap": [6, 12, 19, 34, 42, 47, 58, 82, 106, 109, 115, 142], "section": [6, 13, 16, 36, 38, 39, 42, 44, 49, 50, 52, 58, 59, 67, 71, 81, 84, 96, 116, 132, 139, 148, 151, 164], "cfl": [6, 49, 94, 98, 104, 108, 118, 119, 124, 148, 150, 151, 152], "spatial": [6, 17, 27, 32, 36, 37, 41, 42, 47, 48, 49, 64, 68, 72, 101, 115, 119, 123, 130, 132, 140, 143, 149, 150, 151, 152, 170], "reduc": [6, 16, 36, 42, 49, 55, 118, 124, 126, 135, 170], "thu": [6, 51, 98, 101, 127, 158], "proce": [6, 18, 19, 30, 151], "advanc": [6, 17, 36, 56, 70, 76, 108, 124, 136, 148, 149, 167], "taken": [6, 34, 70, 75, 98, 104, 115, 148, 167], "around": [6, 32, 34, 42, 63, 97, 113, 116, 130, 149, 150, 158, 164, 167], "librari": [6, 13, 15, 16, 18, 19, 22, 24, 27, 29, 30, 34, 36, 38, 39, 44, 47, 49, 56, 63, 66, 76, 77, 78, 86, 92, 97, 99, 104, 109, 111, 112, 115, 125, 130, 144, 145, 149, 156, 157, 165, 167], "bcnamr": [6, 16, 127, 148, 150, 167], "check": [6, 14, 15, 16, 22, 34, 38, 39, 43, 44, 54, 55, 56, 58, 59, 60, 62, 66, 71, 82, 85, 88, 89, 91, 96, 99, 103, 104, 106, 108, 109, 111, 112, 115, 120, 129, 142, 144, 145, 149, 150, 156, 157, 158, 164, 165, 166, 167], "denot": [6, 19, 24, 37, 47, 57, 140, 164], "procedur": [6, 16, 42, 48, 49, 59, 167], "updat": [6, 12, 13, 24, 25, 27, 34, 53, 56, 61, 62, 64, 84, 96, 104, 106, 107, 110, 113, 118, 119, 123, 125, 126, 127, 128, 129, 130, 140, 149, 150, 152, 155, 158, 161, 167], "consist": [6, 27, 34, 36, 51, 55, 59, 63, 99, 110, 125, 135, 136, 140, 142, 151, 162, 167], "replac": [6, 13, 31, 36, 41, 47, 52, 56, 58, 59, 61, 64, 66, 81, 89, 93, 97, 99, 100, 101, 102, 106, 109, 116, 118, 119, 125, 127, 129, 130, 135, 139, 140, 144, 164, 165], "ly": [6, 70], "within": [6, 16, 30, 36, 37, 58, 62, 70, 72, 78, 82, 100, 109, 111, 115, 140, 142, 147, 153, 164], "approxim": [6, 16, 18, 19, 27, 35, 52, 55, 72, 75, 140], "lead": [6, 13, 24, 34, 36, 52, 55, 68, 71, 75, 111, 114, 132, 144, 149], "total": [6, 32, 36, 55, 75, 77, 98, 104, 148, 149, 150, 152, 161], "mass": [6, 98, 118, 154], "restor": 6, "global": [6, 14, 94, 106, 109, 118, 143, 162, 166, 167], "fix": [6, 21, 22, 24, 27, 35, 37, 41, 47, 48, 49, 58, 59, 63, 64, 66, 70, 72, 86, 97, 102, 118, 119, 120, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 141, 148, 150, 152, 164], "up": [6, 13, 19, 24, 30, 31, 32, 34, 36, 38, 39, 42, 43, 47, 48, 55, 58, 59, 63, 66, 70, 71, 75, 77, 82, 88, 89, 91, 93, 95, 96, 97, 99, 104, 105, 108, 111, 113, 115, 116, 118, 123, 124, 127, 130, 132, 137, 142, 144, 147, 150, 152, 161, 162, 165, 166], "style": [6, 24, 30, 32, 36, 41, 53, 55, 70, 73, 82, 86, 91, 127, 151], "olig": [6, 17], "colella": [6, 17], "bergeroliger84": [6, 17], "bergercolella89": [6, 17], "fortran": [6, 9, 11, 13, 14, 19, 22, 25, 29, 30, 32, 34, 35, 36, 37, 38, 47, 48, 50, 57, 60, 62, 66, 67, 68, 72, 76, 77, 78, 81, 84, 86, 88, 89, 91, 94, 96, 97, 99, 101, 102, 104, 105, 106, 109, 111, 118, 123, 124, 125, 127, 128, 129, 135, 136, 140, 141, 146, 149, 150, 151, 152, 158, 160, 161, 162], "written": [6, 11, 27, 32, 34, 36, 37, 43, 47, 62, 63, 64, 65, 75, 77, 78, 82, 86, 95, 96, 97, 101, 125, 140, 148, 149, 150, 151, 152, 158, 164, 167], "ga": [6, 102], "dynam": [6, 22, 32, 36, 52, 75, 78, 149], "merg": [6, 13, 27, 30, 56, 58, 59, 62, 123], "earli": [6, 22, 144], "mjb": [6, 17], "rjl": [6, 17, 111, 129], "fulli": [6, 52, 55, 56, 126, 130, 140, 151, 158, 159], "consid": [6, 42, 52, 62, 70, 89, 111, 146, 153, 164], "adjac": [6, 16, 34, 48, 115, 144, 148], "equival": [6, 47, 56, 57, 63, 64, 77, 129, 135, 162], "copi": [6, 14, 15, 16, 19, 38, 39, 47, 55, 58, 59, 62, 71, 88, 91, 101, 106, 112, 113, 114, 115, 120, 124, 127, 131, 144, 145, 149, 153, 156, 157, 162, 167], "interior": [6, 16, 42, 77, 106], "howev": [6, 13, 16, 18, 19, 24, 34, 38, 39, 42, 44, 49, 50, 52, 55, 62, 65, 67, 70, 72, 75, 76, 77, 86, 89, 96, 115, 116, 125, 127, 129, 143, 144, 147, 151, 161], "lie": [6, 34, 35, 37, 70, 72, 115, 130, 142], "outsid": [6, 16, 41, 63, 70, 130, 142, 144, 162, 164], "li": [6, 16, 34, 37, 72, 115, 142], "along": [6, 14, 16, 19, 26, 29, 32, 34, 42, 47, 55, 58, 61, 75, 77, 111, 115, 118, 123, 138, 139, 142, 144, 151, 166], "unless": [6, 34, 43, 44, 63, 102, 110, 143, 148, 149, 164], "standard": [6, 16, 19, 32, 34, 36, 49, 55, 57, 71, 77, 89, 92, 104, 111, 115, 116, 150, 151, 152, 153, 162, 167, 170], "beyond": [6, 32, 110, 127], "modifi": [6, 9, 14, 15, 16, 18, 19, 22, 24, 29, 34, 38, 39, 42, 47, 48, 58, 59, 62, 64, 66, 71, 74, 82, 89, 92, 94, 96, 101, 111, 112, 113, 114, 115, 122, 124, 125, 126, 127, 132, 142, 144, 145, 148, 150, 151, 152, 156, 157, 162, 164, 167], "damag": [6, 65, 86], "bcn": [6, 16, 152, 167], "nd": [6, 16, 115, 127, 130, 167], "actual": [6, 29, 32, 36, 57, 62, 63, 71, 75, 82, 92, 97, 109, 113, 143, 151], "softwar": [6, 13, 26, 27, 31, 48, 52, 65, 86, 96, 97, 98, 153, 162], "With": [6, 24, 30, 47, 51, 53, 55, 62, 70, 78, 115, 124, 140, 142, 148], "opposit": [6, 16, 97], "side": [6, 16, 19, 20, 34, 55, 58, 68, 75, 97, 116, 118, 135, 136, 137, 140, 170], "everi": [6, 12, 30, 34, 36, 47, 64, 66, 67, 77, 88, 91, 93, 97, 98, 106, 115, 116, 118, 125, 126, 140, 144, 146, 148, 150, 152, 158, 162, 164, 167], "few": [6, 12, 13, 19, 24, 28, 30, 31, 39, 49, 52, 58, 70, 71, 89, 104, 108, 110, 115, 116, 130, 143, 160, 162, 167], "coarsest": [6, 19, 36, 55, 77, 119, 139, 148], "revis": [6, 125], "shock": [6, 17, 52, 104, 115], "accord": [6, 57, 97], "criteria": [6, 7, 24, 27, 34, 70, 106], "cluster": [6, 17, 115, 149, 150], "rigoutsi": 6, "bergerrigoutsis91": [6, 17], "nonoverlap": 6, "rectangl": [6, 7, 27, 32, 36, 70, 75, 115, 130, 164], "balanc": [6, 17, 78, 126, 141, 156, 157], "conflict": [6, 30, 62, 66, 71, 107, 111], "goal": 6, "possibl": [6, 13, 24, 28, 30, 32, 34, 36, 37, 47, 49, 51, 52, 55, 64, 65, 66, 75, 82, 86, 94, 97, 99, 100, 104, 109, 111, 115, 140, 142, 143, 148, 149, 162, 166, 167], "minim": [6, 62, 70, 97, 142, 149, 164], "overhead": [6, 76, 115, 161], "cutoff": [6, 150], "control": [6, 7, 25, 27, 34, 36, 44, 47, 58, 62, 64, 71, 77, 84, 87, 92, 94, 96, 97, 98, 99, 101, 115, 125, 130, 141, 151], "fraction": [6, 13, 32, 115, 148, 167, 170], "70": [6, 36, 55], "realli": [6, 72, 116, 167], "At": [6, 13, 29, 30, 36, 38, 39, 42, 70, 99, 104, 108, 110, 115, 130, 148], "present": [6, 26, 63, 72, 94, 97, 102, 103, 104, 109, 153, 154, 167, 170], "previous": [6, 24, 34, 70, 77, 84, 118, 123, 130, 144], "bilinear": [6, 34, 42, 47, 57, 72, 119, 120, 162], "doxygen": [6, 7, 27, 126], "flowchart": [6, 7, 27], "capabl": [7, 12, 19, 24, 34, 36, 47, 52, 56, 64, 70, 78, 89, 96, 119, 124, 125, 127, 128, 129, 130, 131, 135, 136, 164, 166], "block": [7, 32, 35, 42, 63, 75, 77, 78, 88, 97, 106, 109, 116, 167], "structur": [7, 10, 24, 34, 36, 37, 41, 59, 62, 66, 78, 103, 104, 125, 142, 147, 164], "input": [7, 14, 16, 22, 25, 27, 29, 32, 35, 37, 43, 48, 55, 63, 67, 70, 71, 77, 88, 91, 92, 94, 96, 102, 103, 104, 109, 113, 124, 127, 128, 129, 140, 150, 151, 152, 158, 159, 162, 164, 167], "indic": [7, 16, 19, 22, 24, 27, 31, 32, 34, 36, 41, 42, 44, 47, 48, 55, 57, 59, 62, 67, 71, 72, 80, 84, 94, 98, 99, 102, 104, 108, 111, 115, 116, 125, 130, 132, 140, 141, 148, 149, 150, 151, 152, 154, 162, 164, 167], "tool": [7, 8, 17, 24, 25, 30, 32, 34, 35, 36, 37, 38, 39, 42, 48, 49, 50, 51, 52, 55, 57, 60, 61, 62, 63, 71, 75, 80, 81, 82, 83, 85, 96, 111, 114, 120, 121, 125, 126, 130, 131, 151, 153, 162, 164, 166, 168], "matlab": [7, 24, 27, 38, 39, 80, 81, 82, 100, 110, 118, 127, 130, 131], "deprec": [7, 32, 48, 58, 62, 118, 123, 127, 135, 137, 162, 164], "debug": [7, 18, 44, 66, 77, 81, 98, 106, 111, 116, 135, 148, 150], "flag": [7, 12, 13, 18, 24, 27, 30, 31, 41, 43, 44, 48, 56, 62, 76, 89, 107, 109, 111, 118, 123, 128, 132, 150, 151], "sampl": [7, 8, 14, 17, 18, 27, 31, 36, 44, 47, 48, 51, 55, 64, 75, 111, 116, 135, 139, 142, 148, 149, 162, 164, 167], "ghost": [7, 16, 19, 76, 77, 94, 97, 104, 106, 125, 132, 136, 148, 150, 152, 161, 167, 170], "flagregion": [7, 27, 70, 115, 130, 132, 142, 149, 151], "rule": [7, 13, 27, 63, 70, 89], "convex": [7, 34], "slu": 7, "bounding_box": [7, 35], "mask_outsid": [7, 70], "write": [7, 30, 32, 35, 36, 37, 41, 42, 47, 48, 54, 57, 58, 68, 75, 77, 78, 81, 88, 91, 94, 95, 97, 98, 99, 103, 118, 125, 127, 150, 152, 158, 162, 164], "instanti": [7, 91, 99, 101, 104, 106, 136, 150, 152], "make_kml": 7, "simpl": [7, 31, 38, 39, 41, 48, 59, 72, 75, 89, 96, 101, 102, 104, 109, 114, 116, 164], "select": [7, 12, 13, 15, 16, 30, 34, 42, 70, 97, 98, 104, 112, 115, 119, 126, 130, 138, 145, 148, 151, 156, 157, 166], "continent": [7, 70], "shelf": [7, 70], "guid": [7, 13, 17, 20, 25, 26, 27, 48, 50, 56, 61, 96, 110, 115, 118, 126, 130, 135, 136, 137, 155], "adjoint": [7, 17, 27, 56, 115, 127, 128], "gaug": [7, 27, 34, 36, 48, 49, 63, 72, 94, 95, 106, 113, 119, 123, 124, 125, 126, 127, 130, 135, 139, 143, 147, 150], "extend": [8, 16, 24, 42, 63, 70, 71, 94, 127, 142, 144, 151, 162, 164, 170], "directli": [8, 18, 19, 21, 25, 34, 48, 52, 61, 71, 75, 82, 84, 88, 89, 92, 96, 106, 109, 111, 127, 135, 164, 168], "obviou": [8, 55], "elimin": [8, 24, 70, 89, 111, 127, 151], "gallery_classic_amrclaw": 8, "num_cel": [8, 24, 49, 94, 140, 148, 149, 150, 152], "refinement_ratios_i": [8, 149, 150], "sweep": [8, 140], "transvers": [8, 94, 125, 132, 140, 141, 148, 167, 170], "graph": 9, "understand": [9, 27, 38, 39, 52, 81, 96, 108, 115, 140], "filpatch": [9, 42, 125, 129, 132], "idea": [10, 26, 32, 70, 71, 78, 88, 108, 120, 164, 170], "overal": [10, 88], "who": [10, 12, 21, 24, 26, 34, 44, 52, 60, 118], "gori": 10, "monster": 10, "column": [10, 32, 34, 47, 49, 52, 64, 98, 102, 123, 142, 164], "markup": 11, "languag": [11, 81, 109], "restructur": [11, 58], "text": [11, 58, 59, 63, 77, 91, 97, 104, 123], "sphinx": [11, 25, 27, 59, 126], "covert": 11, "convert_readm": 11, "brows": [11, 26, 45, 55, 71, 153, 167], "insert": [11, 16, 75, 97, 118, 146], "script": [11, 21, 22, 30, 32, 34, 36, 43, 47, 55, 58, 66, 71, 78, 81, 86, 89, 93, 95, 96, 98, 99, 104, 109, 111, 116, 127, 131, 140, 147, 151, 152, 164], "invok": [11, 14, 19, 76, 144, 165], "minor": [11, 19, 55, 58, 98, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 130, 132, 134, 136, 137], "syntax": [11, 61, 146], "highlight": [11, 13], "header": [11, 32, 34, 36, 42, 47, 57, 70, 75, 77, 97, 103, 123, 125, 127, 158, 162, 164], "complex": [12, 19, 36, 41, 94], "archiv": [12, 23, 39, 55, 59, 116, 153, 160, 164, 166], "github": [12, 15, 19, 24, 25, 26, 27, 28, 31, 56, 58, 61, 62, 93, 101, 105, 112, 116, 118, 122, 124, 125, 126, 135, 138, 140, 141, 145, 156, 157, 165], "app": [12, 13, 20, 25, 28, 30, 31, 40, 45, 46, 75, 113, 114, 118, 122, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 141], "com": [12, 13, 19, 25, 26, 28, 30, 31, 51, 56, 58, 59, 61, 62, 97, 99, 101, 105, 122, 124, 125, 126, 135, 138, 141], "fvmbook": [12, 17, 45, 46], "galleri": [12, 17, 27, 34, 36, 38, 39, 40, 45, 48, 49, 59, 80, 81, 93, 96, 110, 116, 122, 126, 153, 160, 167], "anim": [12, 16, 36, 45, 49, 55, 123, 130, 131, 135, 153], "instal": [12, 13, 19, 20, 25, 27, 31, 38, 46, 55, 58, 59, 84, 86, 87, 90, 95, 97, 108, 110, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 146, 169], "collect": [12, 27, 28, 30, 32, 34, 75, 81, 88, 104, 153], "either": [12, 16, 19, 22, 32, 34, 36, 42, 48, 50, 55, 64, 66, 70, 71, 75, 77, 82, 84, 88, 94, 96, 97, 98, 104, 109, 111, 115, 116, 123, 124, 125, 127, 135, 140, 142, 144, 149, 151, 158, 162, 164, 167, 170], "clone": [12, 20, 25, 26, 45, 56, 58, 59, 62, 85, 99, 105, 114, 118, 135, 136, 137, 165], "git": [12, 13, 25, 26, 27, 28, 56, 59, 62, 96, 105, 116, 129], "navig": [12, 31, 58, 153], "green": [12, 18, 19, 63, 70, 75, 82, 116, 164], "button": [12, 13, 30, 55, 63, 126], "download": [12, 13, 30, 31, 32, 39, 40, 42, 48, 55, 59, 61, 62, 93, 99, 105, 127, 128, 138, 160, 164, 165, 166], "zip": [12, 55, 59], "illustr": [12, 27, 32, 34, 38, 46, 48, 49, 55, 70, 71, 75, 77, 114, 122, 123, 127, 129, 140, 142, 153, 154, 164], "variou": [12, 19, 22, 24, 32, 36, 41, 46, 52, 58, 71, 72, 75, 82, 84, 94, 108, 110, 111, 115, 125, 140, 147, 151, 154, 158], "visibl": [12, 13, 46, 55, 114, 153], "render": [12, 24, 34, 46, 55, 63, 168], "advantag": [12, 19, 36, 47, 64, 81, 97, 110, 116, 142], "independ": [12, 25, 32, 36, 37], "contact": [12, 93, 96, 105], "u": [12, 13, 16, 26, 31, 34, 36, 37, 51, 52, 59, 60, 62, 64, 86, 93, 96, 102, 105, 106, 107, 108, 113, 126, 140, 149, 152, 158, 166], "storm": [12, 17, 26, 27, 48, 123, 126, 127, 128, 129, 131, 132, 133], "surg": [12, 17, 26, 27, 48, 123, 126, 127, 128, 129, 132, 158], "empti": [12, 36, 47, 103, 106, 109, 111, 118, 148, 151, 158, 164], "gitmodul": 12, "pull": [12, 26, 28, 31, 58, 59, 61, 93, 101, 116, 122, 125, 126, 132, 135, 140], "request": [12, 26, 28, 32, 36, 37, 47, 58, 61, 77, 88, 93, 94, 98, 101, 103, 116, 118, 125, 127, 132, 140, 151, 158, 164], "init": [12, 27, 30, 42, 48, 56, 59, 61, 143, 151], "leav": [12, 13, 16, 47, 62, 149, 164], "off": [12, 13, 47, 52, 55, 63, 71, 84, 91, 98, 115, 135, 149, 164], "won": [12, 13, 70, 89, 164], "hurt": [12, 67], "maintain": [12, 30, 110, 127, 149, 162, 167], "flavor": [12, 23, 97], "demonstr": [12, 27, 93, 99], "agre": [12, 30, 42, 57, 140, 161, 164, 167], "seen": [12, 24, 34, 38, 39, 40, 52, 76, 101, 148, 153], "cloud": 13, "elast": [13, 75], "sign": [13, 26, 82, 132, 158], "account": [13, 26, 30, 59, 90, 99, 139], "750": 13, "free": [13, 55, 66, 75, 86, 90, 101, 105, 107], "micro": 13, "suffici": [13, 16, 18, 19, 22, 36, 47, 75, 76, 77, 113, 119, 135, 148, 151], "tier": 13, "inform": [13, 14, 24, 27, 34, 35, 37, 38, 39, 49, 50, 51, 52, 53, 54, 62, 67, 77, 82, 83, 84, 88, 89, 94, 96, 98, 99, 100, 102, 103, 109, 111, 124, 127, 128, 130, 136, 138, 139, 140, 143, 146, 148, 149, 151, 158, 161, 162, 165, 166, 167, 168], "uw": [13, 26], "escienc": 13, "aw": 13, "tutori": [13, 31, 59, 84, 87, 91, 96, 105, 111, 114], "gear": 13, "faq": [13, 27, 81], "price": 13, "charg": 13, "per": [13, 32, 37, 47, 49, 55, 63, 71, 76, 97, 149], "thereof": 13, "regardless": [13, 37, 42, 70, 115, 148], "cpu": [13, 56, 124, 127, 129, 161], "consol": [13, 98, 151], "tab": [13, 58, 138], "east": [13, 162], "cheaper": 13, "rate": 13, "menu": [13, 20, 27, 58, 63, 118, 126, 135, 136, 137, 138, 143, 166], "imag": [13, 38, 39, 42, 59, 63, 70, 116, 127, 142], "platform": [13, 55, 91, 99, 110, 116], "finish": [13, 82, 88], "load": [13, 63, 98, 100, 103, 109, 116, 164, 168], "databas": [13, 32, 75, 109, 113, 127, 162], "uwamath": 13, "bar": [13, 58, 158], "screen": [13, 30, 55, 63, 91, 98, 99, 124, 150, 152], "shapshot": 13, "machin": [13, 27, 76, 78, 116, 125, 146], "disk": [13, 47, 88, 97, 98, 116, 125], "ubuntu": 13, "linux": [13, 74, 85, 107, 116, 146], "popup": 13, "look": [13, 14, 24, 27, 30, 32, 42, 55, 58, 59, 63, 71, 82, 84, 89, 94, 99, 103, 104, 108, 109, 111, 116, 120, 127, 136, 142, 148, 149, 151, 161, 164, 165], "sort": [13, 42, 127, 147, 165], "larger": [13, 22, 34, 49, 55, 63, 75, 76, 77, 82, 94, 119, 125, 132, 149, 151, 162], "cost": [13, 104], "continu": [13, 24, 30, 32, 51, 53, 58, 86, 110, 118, 140, 148, 170], "eventu": [13, 48, 130], "don": [13, 29, 30, 58, 59, 82, 97, 98, 99, 105, 116, 150, 165], "pair": [13, 51, 97, 116, 164], "secur": 13, "quick": [13, 27, 39, 48, 50, 60, 85, 116, 160], "close": [13, 42, 55, 58, 63, 70, 71, 97, 115, 118, 130, 149, 158], "back": [13, 29, 31, 58, 59, 126], "statu": [13, 30, 54, 91, 108], "wait": 13, "until": [13, 34, 64, 70, 137, 144], "refresh": [13, 47], "bottom": [13, 15, 19, 32, 38, 39, 48, 52, 68, 70, 75, 88, 101, 102, 125, 126, 145, 156, 157], "scroll": 13, "down": [13, 32, 98, 124, 158, 162, 164], "dn": 13, "screenshot": [13, 55], "rjlkei": 13, "pem": 13, "abl": [13, 58, 111], "ssh": [13, 30], "keypair": 13, "50": [13, 17, 34, 51, 55, 72, 104, 120, 150], "19": [13, 17, 26, 133, 134, 138, 161], "75": [13, 17, 92, 108, 142], "229": 13, "amazonaw": 13, "gfortran": [13, 62, 76, 85, 87, 107, 118, 146, 165], "ipython": [13, 78, 82, 84, 89, 90, 96, 98, 105, 108, 111, 123, 124], "scipi": [13, 37, 89, 110, 137, 158, 164], "netcdf": [13, 37, 44, 48, 124, 127, 129, 131, 158, 164, 166], "apach": 13, "server": [13, 31, 42, 55, 58, 59, 70, 127, 162, 166], "apt": [13, 85], "fetch": [13, 51], "bring": [13, 55, 58, 71, 151], "master": [13, 15, 27, 31, 58, 59, 62, 101, 112, 118, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 141, 145, 156, 157], "make_lib": 13, "compil": [13, 18, 19, 27, 38, 39, 43, 50, 62, 67, 76, 78, 84, 85, 89, 96, 97, 101, 105, 109, 118, 119, 140, 141, 146], "bashrc": [13, 44, 107, 146], "Of": [13, 28, 75, 108, 113, 162], "cours": [13, 28, 34, 47, 50, 64, 75, 99, 100, 108, 110, 113, 151, 162], "tar": [13, 129, 138], "instruct": [13, 19, 20, 26, 27, 38, 39, 42, 55, 56, 58, 59, 88, 90, 96, 99, 105, 108, 111, 118, 126, 133, 135, 136, 137, 138, 139, 165], "window": [13, 32, 71, 84, 146], "respons": [13, 52, 88, 103], "pretti": 13, "slow": [13, 55, 98, 107], "_plot": [13, 38, 39, 47, 71, 84, 118, 147, 153], "local": [13, 17, 19, 22, 27, 30, 55, 58, 63, 66, 67, 71, 92, 94, 101, 106, 125, 127, 136, 144, 162, 164, 167], "sftp": 13, "much": [13, 19, 30, 34, 36, 44, 49, 55, 77, 78, 81, 85, 110, 115, 119, 123, 130, 135, 136, 142, 148, 151, 161, 164], "smaller": [13, 36, 55, 68, 78, 94, 98, 119, 135, 144, 148, 150, 151, 152, 164], "quicker": [13, 142], "browser": [13, 30, 31, 38, 39, 55, 58, 153], "explain": [13, 19, 34, 52, 70, 132, 148, 153], "webserv": 13, "inbound": 13, "port": [13, 31, 95, 96, 101, 149], "22": [13, 26, 149, 164], "80": [13, 17, 55, 99, 142], "drop": [13, 18, 19, 58, 85, 130, 132, 144, 148], "tcp": 13, "Then": [13, 16, 30, 31, 32, 36, 47, 58, 59, 60, 67, 70, 75, 76, 84, 88, 91, 99, 105, 106, 107, 111, 118, 140, 142, 164, 165], "someth": [13, 29, 30, 58, 66, 74, 81, 98, 103, 104, 111, 118, 162, 165, 167], "shot": 13, "ln": 13, "expos": [13, 78], "home": [13, 31, 32, 62, 146], "scp": 13, "TO": [13, 65, 86], "send": [13, 26, 101, 140], "remot": [13, 55, 59, 127, 164, 166], "rel": [13, 18, 19, 22, 32, 43, 50, 52, 55, 75, 76, 82, 96, 109, 111, 116, 118, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 143, 149, 151, 153, 162, 166], "end": [13, 31, 32, 34, 35, 36, 47, 51, 55, 59, 63, 91, 98, 102, 108, 110, 113, 115, 118, 124, 125, 127, 139, 141, 142, 150, 152, 158, 161], "retriev": [13, 37, 51, 84, 89, 104, 164, 166], "sit": 13, "idl": 13, "action": [13, 14, 89], "restart": [13, 27, 47, 77, 84, 96, 118, 124, 125, 126, 127, 129, 132, 136, 148, 150, 152], "later": [13, 36, 37, 42, 54, 55, 62, 84, 104, 139], "But": [13, 19, 34, 42, 55, 72, 82, 107, 120, 127, 144, 146], "futur": [13, 24, 27, 28, 38, 39, 42, 49, 52, 57, 63, 68, 88, 104, 110, 124, 125, 127, 130, 136, 149, 158, 162], "job": [13, 134], "eb": 13, "runclaw": [14, 54, 118, 120, 129, 131, 137, 140], "autom": [14, 58, 89, 116], "certain": [14, 34, 48, 61, 70, 98, 115, 124, 142, 148], "keep": [14, 27, 30, 34, 35, 37, 38, 39, 76, 88, 91, 96, 106, 109, 116, 120], "log": [14, 27, 30, 31, 94, 95, 96, 103, 104], "came": 14, "rundir": [14, 91], "environ": [14, 18, 19, 27, 30, 38, 39, 40, 43, 54, 55, 58, 61, 62, 71, 74, 76, 78, 100, 107, 109, 111, 125, 164, 165], "noth": [15, 64, 106, 128, 145, 156, 157, 164, 167], "rememb": [15, 29, 76, 82, 99, 145, 156, 157], "b4step1": [15, 67, 167], "b4step2": [15, 145, 167], "b4step3": 15, "branch": [15, 20, 27, 31, 44, 54, 56, 59, 61, 62, 112, 116, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 145, 156, 157], "tag": [15, 55, 59, 61, 112, 145, 149, 150, 156, 157], "bathymetri": [15, 48, 52, 55, 63, 102, 113, 125, 127, 141, 143, 145, 151, 162, 164], "area": [15, 24, 48, 104, 113, 125, 144, 145], "dy": [15, 51, 57, 63, 64, 77, 89, 94, 98, 123, 127, 145, 162, 164], "capac": [15, 102, 145, 148, 149, 150, 152], "length": [15, 32, 37, 49, 52, 63, 75, 101, 106, 125, 132, 145, 148, 149, 150, 151, 167], "latter": [15, 18, 47, 70, 72, 101, 130, 142, 145, 148, 158, 167], "quantiti": [15, 18, 19, 34, 37, 63, 71, 72, 91, 95, 96, 102, 106, 141, 145, 151], "coordinate_system": [15, 18, 49, 64, 145, 151], "impos": [16, 89, 115, 156, 157, 170], "chapter": [16, 140, 148, 167], "choic": [16, 48, 81, 104, 148, 150, 151, 152, 167], "bc_lower": [16, 88, 101, 108, 148, 150, 152], "bc_upper": [16, 88, 101, 108, 148, 150, 152], "extrap": [16, 101, 108, 148, 150], "outflow": [16, 148, 150, 152], "move": [16, 34, 38, 39, 48, 58, 62, 64, 75, 101, 115, 119, 121, 126, 151, 154, 162, 163], "normal": [16, 19, 35, 36, 56, 58, 64, 82, 101, 111, 140, 141, 148, 149, 150, 151, 152], "fairli": [16, 52, 125], "good": [16, 19, 30, 52, 55, 65, 76, 86, 108, 113, 116, 125, 132, 140], "outgo": 16, "let": [16, 48, 62, 86, 113, 126, 132, 140], "without": [16, 24, 35, 43, 47, 52, 63, 65, 66, 67, 70, 71, 82, 84, 86, 92, 96, 97, 98, 109, 111, 116, 136, 142, 146, 150, 152, 158, 165, 167], "particularli": [16, 19, 29, 31, 34, 36, 54, 55, 60, 61, 62, 75, 77, 111, 120, 123, 127, 132, 136, 144, 162], "perfect": 16, "hit": [16, 17, 36, 71, 77, 84, 98, 148], "obliqu": 16, "perfectli": 16, "wall": [16, 44, 101, 108, 124, 127, 129, 148, 150, 152, 161], "veloc": [16, 34, 36, 51, 64, 71, 84, 101, 102, 108, 125, 135, 143, 148, 149, 150, 151, 152, 167], "momentum": [16, 18, 34, 36, 37, 52, 64, 68, 98, 132, 141, 151, 154, 162], "third": [16, 18, 19, 34, 57, 92, 161, 164], "acoust": [16, 31, 38, 39, 52, 87, 88, 91, 93, 96, 104, 105, 123, 140, 150, 167], "p": [16, 17, 31, 84, 86, 88, 94, 97, 98, 102, 106, 118, 140, 170], "hu": [16, 18, 19, 36, 37, 64, 68, 102, 141, 151], "hv": [16, 19, 36, 37, 64, 68, 141, 151], "equal": [16, 19, 32, 34, 35, 36, 37, 49, 51, 55, 72, 75, 77, 99, 101, 115, 139, 142, 148, 150, 152, 162, 164], "far": [16, 18, 19, 41, 45, 70, 81, 128, 130, 132, 135], "symmetri": [16, 49], "physic": [16, 19, 47, 49, 55, 89, 94, 96, 108, 115, 170], "slightli": [16, 19, 42, 57, 125, 126, 132, 142], "complic": [16, 82, 89, 142, 147], "alwai": [16, 19, 24, 28, 29, 30, 34, 36, 37, 44, 57, 58, 62, 71, 88, 97, 114, 115, 119, 120, 132, 136, 144, 148, 150, 152, 162, 167], "alon": [16, 55], "topographi": [16, 17, 19, 27, 34, 35, 36, 37, 47, 48, 49, 52, 57, 63, 68, 72, 75, 83, 113, 114, 118, 119, 120, 121, 123, 124, 127, 130, 133, 136, 142, 143, 144, 156, 157, 163], "artifici": [16, 144], "ignor": [16, 49, 55, 63, 97, 123, 132, 143, 164], "incom": 16, "truncat": [16, 36, 77, 97, 148], "spuriou": [16, 34, 116], "extropl": 16, "dry": [16, 17, 27, 34, 48, 102, 130, 133, 141, 144], "land": [16, 42, 48, 50, 55, 58, 59, 63, 70, 72, 83, 130, 144, 151, 164], "tank": [16, 49, 52], "bc2amr": [16, 127], "calhounhelzellevequ": 16, "envis": 16, "fold": 16, "piec": [16, 52, 94], "glu": 16, "inflat": 16, "websit": [16, 55, 58, 97, 153, 164], "bergercalhounhelzellevequ": 16, "hint": [16, 27, 48, 81, 84, 111, 151, 165], "suppos": [16, 67, 70, 71, 82, 111, 115], "bit": [16, 24, 32, 59, 97, 99, 107, 141], "examin": [16, 38, 39, 47, 70, 111, 135], "own": [16, 22, 26, 30, 36, 62, 88, 89, 95, 96, 105, 106, 113, 115, 127, 140, 153], "todo": [16, 140, 158, 164, 170], "poster": 17, "resourc": [17, 26, 30, 50, 110], "bale": 17, "rossmanith": 17, "siam": [17, 26, 27, 96, 140], "sci": 17, "24": [17, 55, 72, 142], "2002": 17, "955": [17, 142], "978": 17, "author": [17, 27, 48, 52, 92, 96, 97, 102, 114], "1989": 17, "hydrodynam": 17, "phy": 17, "82": 17, "64": [17, 94, 97, 99, 107], "84": [17, 55], "34": [17, 55, 63, 96], "2011": [17, 26, 86], "pp": 17, "1195": 17, "1206": 17, "adv": 17, "awr11": 17, "1998": 17, "anal": 17, "35": [17, 34, 57, 75, 96], "2298": 17, "2316": 17, "bergerleveque2023": [17, 18, 19, 49], "2023": [17, 20, 45, 118, 136, 137, 138], "implicit": [17, 19, 86, 104], "dispers": [17, 18, 48, 49, 52], "submit": 17, "1984": 17, "partial": [17, 78, 113], "differenti": [17, 32], "53": 17, "484": 17, "512": 17, "rigoutso": 17, "1991": 17, "ieee": 17, "tran": 17, "sy": [17, 42, 70, 91, 150, 152], "man": [17, 27, 48, 52, 151, 156, 157], "cyber": 17, "21": [17, 71, 92, 94, 123, 124, 138], "1278": 17, "1286": 17, "2018": [17, 26, 58, 127, 128, 138], "phd": 17, "thesi": [17, 104], "pure": [17, 56, 84, 94, 96, 97, 99, 104, 116, 141], "appl": 17, "geophi": 17, "173": 17, "4055": 17, "4074": 17, "info": [17, 31, 32, 35, 36, 37, 47, 59, 63, 71, 91, 94, 97, 98, 104, 125, 135, 149, 150, 158], "analysi": 17, "evalu": [17, 29, 32, 36, 37, 68, 72, 88, 94, 104, 164, 167], "preprint": 17, "2000": [17, 57, 162, 164], "165": [17, 161], "126": [17, 164], "166": 17, "leveque96": 17, "1996": 17, "advect": [17, 82, 96, 99, 140, 141, 152, 167], "incompress": 17, "leveque1996": 17, "33": [17, 94, 142], "627": 17, "665": 17, "1997": [17, 96], "multi": [17, 55, 88, 119, 121, 124, 127, 167], "131": [17, 96], "327": [17, 96], "353": [17, 96], "wpalg": 17, "cambridg": 17, "press": [17, 99, 105], "uk": [17, 32], "fvmhp_materi": 17, "acta": 17, "numerica": 17, "211": 17, "289": 17, "dg": 17, "actanum2011": 17, "techniqu": [17, 28], "2013": [17, 26, 96], "a351": [17, 96], "a377": [17, 96], "manuel": [17, 86, 96], "quezada": [17, 86, 96], "luna": [17, 86, 96], "matthew": [17, 86, 96], "kneplei": [17, 86, 96], "emmett": [17, 86, 96], "2012": [17, 24, 26, 52, 96], "scalabl": [17, 96], "c210": [17, 96], "c231": [17, 96], "sisc": [17, 96], "month": [17, 55, 96], "nov": [17, 96], "kimetal2017": [17, 19], "kim": [17, 19], "pedersen": 17, "lovholt": 17, "boussinesq": [17, 27, 48, 49, 52, 118, 137], "studi": [17, 19, 52, 68], "break": [17, 18, 30, 32, 48, 52, 55, 63, 75, 116, 124, 144, 151, 164], "phenomena": [17, 19], "long": [17, 18, 19, 30, 32, 49, 51, 52, 55, 63, 74, 96, 124, 132, 149, 164], "coastal": [17, 52, 130, 143, 144, 151, 162], "engin": [17, 55], "122": [17, 42, 70, 142, 164], "2017": [17, 26, 59, 102, 125, 126, 127, 138], "86": 17, "1016": 17, "coastaleng": 17, "005": 17, "kim201775": 17, "jihwan": [17, 19], "geir": 17, "finn": 17, "vholt": 17, "mandlietal2016": 17, "googl": [17, 26, 27, 30, 42, 48, 51, 63, 70, 93, 97, 99, 107, 123, 125, 133, 140, 142], "scholar": 17, "hundr": [17, 36], "calhellev08": 17, "helzel": 17, "circular": 17, "spheric": [17, 49, 55, 118, 137], "review": [17, 92], "2008": [17, 86, 92, 102], "723": 17, "752": 17, "leveque09": 17, "reproduc": [17, 57, 65, 86], "cise": 17, "11": [17, 34, 82, 102, 131, 132, 138], "2009": [17, 92, 97, 102], "27": [17, 55, 63, 72, 142], "levyon03": 17, "darryl": 17, "yong": 17, "solitari": 17, "layer": [17, 27, 47, 63, 94, 119, 121, 124, 125, 127], "media": 17, "math": [17, 51, 55, 108], "63": [17, 142], "2003": 17, "1539": 17, "1560": 17, "mandli13a": 17, "72": [17, 55, 75], "91": 17, "2013it": 17, "aug": [17, 128], "mandli13b": 17, "dawson": 17, "36": [17, 51, 77, 94], "2014": [17, 26, 102, 117, 119, 120, 121, 122, 123, 138], "clint": 17, "okada85": [17, 32, 75], "okada": [17, 27, 32, 48, 49, 114, 162, 166], "deform": [17, 32, 35, 37, 48, 75, 166], "due": [17, 26, 32, 42, 51, 75, 116, 126, 127, 132, 144, 154, 165], "shear": [17, 32], "tensil": 17, "fault": [17, 27, 32, 48, 49, 114, 127, 134, 162, 166], "bull": [17, 32], "seism": [17, 32], "soc": [17, 32], "am": [17, 32], "1985": [17, 32], "1135": 17, "1154": 17, "repositori": [18, 19, 24, 26, 27, 28, 31, 39, 40, 45, 46, 48, 49, 56, 61, 62, 66, 67, 96, 104, 111, 113, 114, 116, 122, 125, 138, 155], "literatur": [18, 19, 52, 140], "situat": [18, 19, 49, 55, 70, 71, 132], "wavelength": [18, 19, 49, 52], "fluid": [18, 19, 34, 36, 49, 52, 64, 72, 118, 143], "swe": [18, 48], "deriv": [18, 19, 65, 75, 86, 91, 95, 96, 106, 116], "longer": [18, 19, 22, 30, 47, 58, 59, 63, 85, 110, 125, 127, 130, 132, 136, 137, 139, 140, 151, 162, 166], "respect": [18, 32, 34, 49, 55, 63, 96, 97, 102, 164], "txx": 18, "altern": [18, 19, 32, 35, 36, 38, 39, 47, 48, 51, 55, 60, 66, 71, 81, 96, 99, 111, 115, 118, 123, 124, 125], "ellipt": [18, 19], "involv": [18, 19, 26, 101, 104, 113, 154, 159], "xx": [18, 118, 138], "tridiagon": 18, "sgn": [18, 48], "serr": [18, 19], "naghdi": [18, 19], "madsen": [18, 48], "sorensen": [18, 48], "properti": [18, 32, 37, 49, 64, 71, 88, 91, 94, 103, 106, 164], "less": [18, 19, 42, 52, 55, 64, 68, 76, 104, 115, 116, 132, 148], "stabl": [18, 19, 85, 94, 132], "plane": [18, 32, 49, 75, 124, 142, 166], "planar": [18, 49, 75, 140, 141], "axisymmetr": [18, 49], "sphere": [18, 27, 32, 48, 49, 51, 89, 118, 120, 136, 137, 141, 151], "topo": [18, 27, 34, 35, 42, 48, 49, 52, 55, 57, 63, 70, 72, 83, 111, 118, 119, 121, 127, 129, 132, 136, 143, 151, 162, 164], "dtopo": [18, 27, 32, 35, 48, 52, 57, 63, 75, 111, 119, 121, 122, 130, 132, 144, 151, 162, 164, 166], "ident": [18, 42, 67, 94, 97, 99, 116, 164], "bouss_": 18, "templat": [18, 89], "bouss": [18, 19, 49, 118], "lapack": [18, 19, 118, 119], "fflag": [18, 19, 30, 43, 66, 76, 89, 109, 162], "llapack": [18, 107], "lbla": [18, 107], "explicit": [18, 109, 149], "lapack_tridiag": 18, "soubroutin": 18, "bla": [18, 19, 118], "bouss_wavetank_matsuyama": 18, "openmp": [18, 24, 27, 44, 78, 109, 115, 124, 130, 161], "somewher": [18, 19, 123], "boussdata1d": 18, "add_data": [18, 19], "bouss_data": [18, 19], "deepbouss": 18, "switch": [18, 31, 48, 55, 62, 101, 111, 116, 118, 126, 143, 166], "bouss_equ": [18, 19], "alpha": [18, 19, 55, 59, 104], "153": [18, 19], "hardwir": [18, 19, 76], "bouss_modul": [18, 19], "tip": [18, 19, 26, 48, 62, 81, 95, 96, 101, 110], "similarli": [18, 36, 43, 56, 93, 99, 101, 142, 161], "bparam": [18, 19], "15": [18, 19, 34, 42, 57, 59, 63, 70, 75, 94, 142, 150, 161, 164], "caus": [18, 19, 24, 36, 52, 55, 58, 65, 66, 72, 78, 84, 86, 107, 116, 124, 125, 126, 128, 132, 147, 149, 162, 164], "revert": [18, 19, 55], "nondispers": [18, 19], "bouss_min_depth": [18, 19], "criterion": [18, 19, 34, 115, 150], "onshor": [18, 19, 34, 49, 63, 68, 70, 142, 144], "nearest": [18, 19, 37, 42, 47, 164], "omit": [18, 19, 62, 116, 118, 125, 139, 151], "unknown": [18, 19, 32, 106], "inund": [18, 19, 34, 48, 49, 55, 68, 115, 130, 143, 166], "shore": [18, 19, 36, 42, 48, 115, 130, 144], "simplest": [18, 19, 62, 74, 108], "known": [19, 34, 44, 71, 75, 76, 82, 105, 107, 116, 126, 148], "landslid": [19, 52], "realist": [19, 55], "test": [19, 24, 27, 32, 38, 41, 44, 54, 55, 59, 60, 61, 62, 68, 81, 86, 87, 89, 95, 96, 102, 109, 110, 115, 120, 124, 125, 126, 127, 130, 132, 136, 140, 152, 158, 161, 162, 164], "One": [19, 25, 27, 28, 32, 34, 47, 48, 55, 58, 64, 70, 71, 72, 89, 109, 115, 118, 123, 164], "momenta": [19, 64], "effici": [19, 52, 56, 86, 96, 97, 98, 106, 115, 142, 149], "consider": [19, 52, 88], "oper": [19, 53, 116, 125], "spars": [19, 118], "huc": 19, "hvc": 19, "expand": [19, 28, 42, 55, 63], "petsc": [19, 24, 25, 78, 86, 88, 95, 98, 105, 106, 107, 109, 118], "mpi": [19, 78, 99, 118], "prerequesit": 19, "simplic": 19, "practic": [19, 30, 111, 113, 154], "variant": [19, 22, 60, 109, 116, 118], "tune": [19, 28, 149], "match": [19, 32, 36, 41, 55, 63, 97, 103, 116, 158, 164], "airi": 19, "theori": [19, 65, 86, 170], "incorpor": [19, 24, 52, 58, 86, 104, 119, 126, 141, 164], "bonneton": 19, "et": 19, "al": 19, "histor": [19, 52, 75, 166], "boussclaw": 19, "successfulli": [19, 66, 103], "reveal": [19, 47, 108], "stabil": [19, 104, 132, 148], "report": [19, 26, 32, 34, 54, 111, 116, 124, 127, 146, 148, 150], "except": [19, 24, 29, 32, 42, 49, 97, 102, 109, 130, 137, 148, 151, 158, 162], "investig": [19, 116], "radial_flat": 19, "num_eqn": [19, 77, 88, 89, 92, 97, 99, 101, 102, 103, 106, 108, 140, 148, 150, 152, 167], "facilit": [19, 47, 64, 96, 116, 123, 125, 130, 136, 153, 158], "boussdata": 19, "bouss_min_level": 19, "bouss_max_level": 19, "bouss_solv": 19, "bouss_tstart": 19, "avoid": [19, 42, 55, 58, 63, 66, 71, 94, 98, 115, 118, 119, 120, 124, 125, 132, 134, 139, 148, 151, 170], "altogeth": 19, "neighborhood": 19, "recogn": [19, 50, 57, 62, 162], "extrem": [19, 55, 107], "motion": [19, 75, 162], "did": [19, 127, 132, 142, 162], "petsc_dir": [19, 99], "petsc_arch": [19, 99], "shell": [19, 30, 61, 62, 76, 82, 84, 99, 105, 108, 111, 125, 146], "dhave_petsc": 19, "petsc_opt": 19, "options_fil": 19, "petscmpiopt": 19, "adequ": [19, 52], "briefli": [19, 170], "gmre": 19, "krylov": 19, "algebra": 19, "multigrid": 19, "precondition": 19, "manualpag": 19, "ksp": 19, "kspsetfromopt": 19, "pc": 19, "pcsetfromopt": 19, "ex": [19, 38, 39, 91, 118], "xgeoclaw": 19, "runex": [19, 118], "bin": [19, 47, 99, 139], "mpiexec": [19, 99], "word": [19, 98, 127, 158], "process": [19, 27, 36, 38, 39, 48, 55, 56, 75, 88, 93, 94, 99, 105, 106, 109, 116, 118, 125, 135, 137, 148, 165], "incorrectli": [19, 124], "configur": [19, 82, 88, 99, 164], "environment": 19, "implicitamr": 19, "accompani": [19, 20, 23, 118, 135, 136, 137], "novemb": [20, 118, 124, 125, 137, 138], "featur": [20, 24, 27, 30, 34, 42, 55, 58, 71, 82, 89, 115, 116, 118, 122, 124, 125, 127, 132, 135, 136, 137, 138, 158, 162], "dev": [20, 26, 30, 58, 59, 99, 118, 127, 128, 133, 134, 135, 136, 137, 138], "diff": [20, 54, 59, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "tarfil": [20, 59, 62, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "pip": [20, 27, 30, 55, 59, 60, 90, 96, 99, 105, 107, 111, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 146], "doc": [20, 25, 26, 30, 32, 55, 59, 92, 109, 110, 111, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 155], "docker": [20, 27, 59, 60, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 169], "migrat": 21, "intermedi": [21, 34, 37, 75, 139, 167], "easiest": [21, 30, 44, 78, 82, 84, 115, 167], "bulk": [21, 88, 102, 108, 140, 150, 167], "convers": [21, 27, 89, 97, 115, 142, 162, 166], "convert43to46": 21, "inspect": [21, 22, 55], "broken": [21, 22, 30, 75, 116], "renam": [22, 24, 38, 39, 66, 101, 104], "achiev": [22, 89, 156, 157], "convert46to50": 22, "_4": 22, "complet": [22, 24, 30, 51, 66, 84, 88, 89, 99, 109, 116, 137], "delet": [22, 30, 58, 62, 137], "combin": [22, 58, 63, 124, 166], "properli": [22, 34, 38, 39, 42, 43, 52, 55, 57, 58, 62, 63, 70, 74, 77, 91, 116, 119, 122, 127, 130, 132, 146, 148, 151, 154, 162, 164, 165, 167], "permut": 22, "th": [22, 24, 47, 140, 167], "reorder": [22, 24], "pattern": [22, 50, 55, 143], "carefulli": [22, 24, 68], "setaux": [22, 24, 67, 89, 119, 120, 140, 148, 150, 152], "sequenc": [22, 24, 36, 37, 67, 70, 72, 99, 105, 108, 109, 116, 119, 126, 140, 167], "maxmx": [22, 89], "maxmi": [22, 89], "maxmz": 22, "declar": [22, 24, 106, 132, 167], "memori": [22, 24, 76, 77, 78, 88, 91, 98, 106, 132, 149, 150], "alloc": [22, 104, 123, 132, 149], "mx": [22, 24, 49, 57, 77, 89, 99, 102, 140, 150, 162, 167], "resp": [22, 32, 132], "mz": [22, 24], "driver": [22, 67], "led": [22, 128], "homepag": [23, 27], "reorgan": [24, 89, 117, 133], "changelog": [24, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 138], "concern": [24, 48, 149], "evolv": [24, 88, 91, 104], "organ": [24, 25, 38, 39, 91], "affect": [24, 66, 125, 126, 132, 135, 137, 148, 162, 165], "assist": [24, 130], "older": [24, 44, 56, 58, 61, 62, 104, 118, 131, 135, 138, 149], "compris": [24, 96, 164], "webpag": [24, 26, 38, 39, 45, 50, 55, 59, 66, 128, 143], "primari": [24, 30, 31, 48, 113, 116, 158], "auxiliari": [24, 89, 91, 97, 102, 103, 104, 106, 140, 148, 150, 152, 167], "cach": [24, 51, 59, 84, 86, 130, 149], "stride": [24, 164], "contingu": 24, "maux": [24, 140, 167], "ma": [24, 36, 42, 70, 142, 164], "relev": [24, 29, 42, 44, 48, 55, 58, 97, 115, 116, 158], "flexibl": [24, 32, 63, 89, 123, 126, 140, 142, 149], "clean": [24, 58, 59, 109, 118, 123, 127, 137], "systemat": 24, "obscur": 24, "clarifi": 24, "regress": [24, 27, 30, 54, 96, 99, 125, 126, 160], "travi": [24, 132], "miss": [24, 27, 97, 118, 129, 136, 137, 154, 158, 162, 164, 165], "conform": [24, 30, 35, 103, 127, 162], "construct": [24, 32, 34, 57, 72, 88, 94, 109, 136, 158, 159, 162], "visit": [24, 27, 81, 138], "gui": [24, 168], "monitor": [24, 27, 35, 36, 41, 48, 70, 72, 76, 120, 122, 125, 135], "arriv": [24, 34, 36, 42, 48, 125, 143, 144], "fgmax": [24, 27, 36, 41, 48, 63, 72, 76, 120, 122, 125, 126, 130, 131, 135, 136, 137, 151], "ndim": [24, 77, 84, 148, 149], "num_dim": [24, 41, 94, 97, 101, 148, 149, 150, 152], "zlower": 24, "yupper": [24, 150, 164], "zupper": 24, "upper": [24, 34, 35, 41, 49, 92, 94, 101, 142, 148, 150, 152, 162, 164], "mxnest": 24, "neg": [24, 42, 144, 151, 162, 164], "ins": 24, "forc": [24, 27, 43, 48, 66, 70, 109, 115, 130, 141, 144, 149, 159, 164, 165], "prohibit": 24, "again": [24, 43, 66, 70, 75, 82, 84, 88, 89, 98, 102, 107, 111, 127, 133, 162, 165], "2d_grid": 24, "attirbut": 24, "gridlines_show": 24, "grideges_show": 24, "openli": 25, "super": [25, 30, 127, 164], "util": [25, 27, 30, 37, 48, 55, 77, 81, 84, 96, 111, 116, 118, 147, 163, 164, 165], "graphic": [25, 30, 56, 71, 81, 135], "visual": [25, 26, 30, 36, 38, 39, 47, 48, 61, 62, 71, 77, 78, 81, 96, 100, 101, 111, 118, 123, 130, 168], "web": [25, 27, 30, 38, 39, 55, 58, 59, 127, 153, 164], "latest": [25, 27, 46, 55, 58, 59, 61, 62, 90, 99, 105, 118, 120, 124], "legaci": [25, 59, 62], "welcom": [26, 86], "answer": 26, "question": [26, 30, 51, 103], "slack": 26, "channel": [26, 45], "workspac": [26, 71, 106], "join": [26, 82], "experi": [26, 52, 104, 137, 154], "warn": [26, 30, 97, 98, 104, 118, 132, 148, 165], "activ": [26, 34, 36, 41, 58, 104, 113, 151], "gitter": 26, "post": [26, 27, 28, 30, 36, 55, 99, 133, 134, 135, 148, 153], "ask": 26, "twitter": 26, "rais": [26, 32, 62, 97, 103, 105, 109, 158, 164], "photo": [26, 27], "ve": [26, 90, 105, 108], "fork": [26, 58, 59], "track": [26, 27, 30, 34, 35, 36, 47, 48, 55, 58, 60, 62, 76, 88, 96, 109, 116, 119, 128, 130, 133, 135, 141, 158], "youtub": [26, 113, 130], "video": [26, 113, 130], "introductori": 26, "webinar": 26, "csdm": 26, "2019": [26, 56, 128, 129, 130, 138], "randi": [26, 32, 92, 94], "plan": [26, 30, 52, 60, 61, 62, 68, 97, 104, 136, 158], "schedul": 26, "annual": 26, "meet": 26, "took": 26, "onlin": [26, 110, 114, 127, 155, 162], "covid": 26, "four": [26, 72, 94, 115, 116], "short": [26, 49, 52, 101, 132], "slide": 26, "tulan": 26, "clifford": 26, "lectur": 26, "april": [26, 130, 131, 138], "minisymposterium": 26, "cse": 26, "confer": 26, "februari": [26, 126, 132, 133, 138], "march": [26, 27, 34, 41, 42, 48, 119, 120, 138, 142], "boulder": 26, "2015": [26, 59, 102, 123, 124, 125, 138], "summari": [26, 27, 45, 59, 127, 148, 149, 150, 151], "tackl": [26, 30], "progress": [26, 30, 104, 113, 118, 123, 162, 164], "held": [26, 52], "zoom": [26, 55], "conjunct": [26, 42, 70, 97, 115], "23": [26, 130, 131, 138, 149], "25": [26, 34, 42, 45, 57, 70, 75, 88, 94], "28": [26, 122, 123, 126, 127, 128, 129, 130, 138], "unives": 26, "colorado": 26, "immedi": [26, 52, 71, 88, 90, 91, 98], "august": [26, 127, 135, 136, 138], "utah": 26, "hpc": 26, "swag": 26, "introduct": 27, "commit": [27, 32, 54, 58, 59, 116], "licens": [27, 48, 52, 96, 114, 127], "cite": [27, 59, 61, 138], "fund": [27, 60, 96], "troubleshoot": [27, 60, 61, 96], "amazon": 27, "servic": [27, 65, 86], "ec2": 27, "ami": 27, "77": [27, 67, 107], "statist": [27, 124], "b4run": [27, 131], "sytl": [27, 36, 81], "checkpoint": [27, 47, 118, 124, 125, 127, 129, 132, 148, 150, 152], "share": [27, 28, 55, 62, 76, 78, 94, 97, 99], "gpu": [27, 129], "cautionari": [27, 48, 67, 151], "registr": [27, 48, 127, 162, 164], "earth": [27, 42, 48, 51, 56, 63, 70, 75, 123, 125, 133, 142, 151], "slip": [27, 32, 48, 49, 114, 162, 166], "sea_level": [27, 34, 42, 48, 52, 63, 102, 130, 144, 151, 162, 164], "eta": [27, 32, 36, 37, 42, 47, 48, 72, 115, 123, 130, 143, 151], "lagrangian": [27, 47, 48, 130], "particl": [27, 36, 47, 48, 130, 135], "friction": [27, 48, 52, 151, 156, 157], "fgout": [27, 34, 47, 48, 63, 72, 135, 137, 151], "nearshor": [27, 34, 36, 47, 48, 52], "front": [27, 34, 41, 42, 48, 71, 103, 109, 142], "geometri": [27, 32, 49, 75, 96, 97, 101, 103, 106, 123], "jupyt": [27, 46, 48, 75, 78, 96, 110, 114, 123, 124, 130, 140], "notebook": [27, 32, 34, 42, 46, 48, 58, 70, 75, 78, 90, 96, 98, 114, 123, 124, 130, 140, 141, 142, 164], "concept": [27, 140], "pointwis": [27, 34, 57, 106, 123, 162], "potenti": [27, 71, 125, 143], "fly": 27, "commun": [27, 55, 86, 106, 109, 111, 115, 127], "hope": [28, 116], "greatli": [28, 36, 86, 118, 135, 143], "submodul": [28, 30, 56, 59, 61], "stai": [28, 34], "annot": [29, 63], "map2d_to_1d": 29, "unavail": 29, "sens": [29, 55, 64, 127, 132, 170], "context": [29, 55, 167], "plotdata": [29, 36, 37, 47, 82, 84, 91, 118, 124, 125, 147], "els": [29, 30, 62, 70, 106, 127, 142, 144, 152], "scalar": [29, 32, 42, 98, 106, 140, 144, 148, 170], "moment": [29, 32, 128], "outn": 29, "outaux": 29, "prepar": 30, "substanti": [30, 58, 86, 123, 129, 132], "incompat": [30, 55], "built": [30, 31, 49, 68, 78, 87, 96, 99, 101, 103, 115, 116, 156, 157], "correctli": [30, 34, 89, 95, 123], "Be": [30, 71, 143, 166], "verbos": [30, 32, 35, 37, 51, 63, 70, 91, 94, 98, 104, 116, 142, 148, 150, 152, 158, 164], "messag": [30, 43, 51, 58, 62, 71, 76, 91, 94, 98, 100, 103, 104, 106, 107, 118, 132, 148, 150, 152, 165], "wise": [30, 104], "especi": [30, 55, 89, 101], "necessit": 30, "modif": [30, 43, 65, 71, 82, 86, 92, 151], "compat": [30, 32, 35, 51, 55, 63, 75, 77, 81, 97, 99, 107, 120, 121, 125, 126, 136, 164], "explan": 30, "tracker": 30, "increasingli": 30, "push": [30, 58, 59], "unlik": [30, 34, 58, 59, 77], "accid": 30, "subrepositori": [30, 59], "oppos": [30, 159], "inter": [30, 126], "proceed": [30, 58], "txt": [30, 34, 47, 54, 59, 64, 86, 98, 118, 125, 126, 127, 139, 158], "isol": [30, 62], "editabl": 30, "site": [30, 55, 62, 111], "pull_al": [30, 59], "sh": [30, 58, 59, 99], "prompt": [30, 31, 71, 82, 84, 93, 96, 108, 164], "shortli": [30, 116], "handi": [30, 66], "uncommit": [30, 54, 59], "checkout": [30, 56, 58, 59, 61], "claw_git_statu": [30, 54, 59, 131], "claw_git_diff": [30, 54, 59], "usernam": [30, 31], "mind": 30, "password": 30, "whenev": [30, 124, 167], "brought": 30, "new_featur": 30, "accident": [30, 82], "recov": [30, 35], "histori": [30, 37, 59, 62, 84], "throw": [30, 137], "awai": [30, 143], "recreat": [30, 43, 66, 130], "rebas": 30, "onto": [30, 32, 55, 144, 164], "newer": [30, 76, 92, 127], "head": [30, 32, 58], "cleaner": [30, 125], "recompil": [30, 43, 44, 66, 76, 109, 118, 130, 149, 167], "nosetest": [30, 39, 40, 99, 105, 116, 160], "fail": [30, 97, 99, 109, 116, 123, 158], "pr": [30, 59, 116, 127], "someon": [30, 66], "propos": [30, 170], "rid": 30, "cross": [30, 49], "poor": 30, "whole": [30, 55, 98, 99], "lot": [30, 42, 118, 130], "doesn": [30, 34, 62, 67, 106], "pep8": 30, "aim": 30, "vim": 30, "nice": [30, 63, 89, 101, 120, 142], "underlin": 30, "nose": [30, 39, 40, 87, 99, 116, 136, 160], "suit": [30, 55, 116], "exactli": [30, 35, 36, 54, 56, 72, 106, 142, 148], "overrid": [30, 44, 55, 88, 89, 109], "bind": [30, 55, 81, 89, 99], "dockerhub": [31, 59], "riemann_book": [31, 141], "0_dockerimag": 31, "8889": 31, "0_contain": 31, "serv": 31, "jovyan": 31, "exit": [31, 82, 99, 105], "ctrl": [31, 82], "quit": [31, 71, 82, 84, 154], "whatev": [31, 88, 103, 140], "ip": [31, 82, 84], "localhost": 31, "token": 31, "wherev": [31, 165], "ones": [31, 88, 89, 106, 127, 148, 149], "ipynb": [31, 32, 34, 42, 75, 114, 124, 141, 142], "chile2010a": [31, 114], "exercis": [31, 48, 114, 116], "transfer": 31, "laptop": [31, 96], "accomplish": [31, 42, 66], "0_geoclaw_dockerimag": 31, "contains": 31, "rm": [31, 58, 59, 66, 165], "1_contain": 31, "rmi": 31, "1_dockerimag": 31, "prune": 31, "dockeril": 31, "root": [31, 62, 97, 98, 103], "dockerfile_v5": 31, "0_geoclaw": 31, "test_bind": 31, "subfault": [32, 48, 127, 128, 166], "seafloor": [32, 52, 75, 144, 166], "rise_tim": [32, 75], "rise": [32, 75, 143, 144], "rise_time_start": [32, 75], "piecewis": [32, 34, 42, 47, 49, 57, 72, 75, 120, 140, 142, 162], "quadrat": [32, 75], "rise_time_end": [32, 75], "rise_fract": [32, 75], "csv": [32, 75, 127], "erron": [32, 75], "dtopotools_exampl": [32, 75, 114], "test_dtopotool": 32, "deal": [32, 52, 81, 98, 99, 106, 158, 164], "sub": [32, 116, 164], "dtopographi": [32, 75], "ucsbfault": [32, 75], "csvfault": [32, 75], "siftfault": [32, 75, 127], "segmentedplanefault": [32, 75], "fault1d": 32, "subfault1d": 32, "dtopography1d": 32, "plot_dz_contour": 32, "plot_dz_color": 32, "mw": [32, 127], "strike_direct": 32, "input_unit": 32, "coordinate_specif": [32, 75], "subclass": 32, "row": [32, 34, 57, 92, 115, 162, 164], "rupture_typ": [32, 75], "static": [32, 75, 127], "dtopo_typ": [32, 35, 49, 63, 75], "repres": [32, 49, 88, 94, 97, 101, 102, 104, 106, 164, 170], "dz_at_t": 32, "dz": [32, 35, 49, 144, 162], "dz_max": 32, "ab": [32, 56, 101, 109, 115, 142, 164], "self": [32, 35, 37, 104, 136, 164], "cmax_dz": 32, "dz_interv": 32, "colorbar_ticks": 32, "colorbar_labels": 32, "fig_kwarg": [32, 164], "appar": [32, 72, 76], "dz_cellave_at_t": 32, "compos": [32, 88], "mo": 32, "seismic": [32, 37, 48, 75], "containing_rect": 32, "create_dtopo_xi": [32, 75], "rect": [32, 142], "016666666666666666": 32, "buffer_s": [32, 75], "buffer": [32, 42, 47, 115, 124, 125, 149, 150, 164], "x1": [32, 34, 35, 36, 41, 51, 63, 89, 98, 115, 142, 149, 150, 151, 164], "x2": [32, 34, 35, 36, 41, 51, 63, 98, 115, 142, 149, 150, 151, 164], "y1": [32, 34, 35, 36, 41, 51, 63, 89, 98, 115, 142, 149, 150, 151, 164], "y2": [32, 34, 35, 36, 41, 51, 63, 98, 115, 142, 149, 150, 151, 164], "create_dtopographi": [32, 75], "valueerror": [32, 158, 164], "plot_subfault": 32, "plot_centerlin": 32, "slip_color": 32, "cmap_slip": 32, "cmin_slip": 32, "cmax_slip": 32, "slip_tim": 32, "plot_rak": 32, "xylim": 32, "plot_box": [32, 164], "axessubplot": 32, "centroid": [32, 75], "dip": [32, 49, 75], "jet": [32, 71], "rake": [32, 75], "drawn": [32, 55, 147], "plot_subfaults_depth": 32, "column_map": 32, "skiprow": 32, "delimit": 32, "dict": [32, 37, 91, 97, 102, 103, 106, 158, 164], "strike": [32, 75], "calculate_geometri": 32, "kinemat": [32, 48], "skip": [32, 130], "width": [32, 36, 49, 55, 63, 75, 77, 94, 101, 106, 115, 142, 150, 152], "rigid": [32, 127], "mu": [32, 127], "set_dynamic_slip": 32, "slip_at_dynamic_t": 32, "column_list": 32, "output_unit": 32, "adopt": [32, 104], "Not": [32, 55, 94, 125, 132], "noaa": [32, 42, 51, 57, 70, 75, 127, 143, 158, 162, 166], "sift": [32, 75, 127], "ucsb": [32, 75, 166], "definit": [32, 71, 88, 115, 122], "gov": [32, 42, 51, 70, 75, 99, 158], "aboutu": 32, "020204mag_polici": 32, "php": [32, 65, 86], "sift_slip": 32, "longitude_shift": 32, "subset": [32, 34, 42, 70, 127, 142, 162, 164, 166], "load_sift_unit_sourc": 32, "pmel": [32, 75], "pub": [32, 158], "gica2937": 32, "although": [32, 55, 67, 71, 100, 101, 103, 115, 128, 134, 164], "notat": [32, 51, 63, 140], "compress": [32, 97, 164], "info_sz": 32, "dat": [32, 158], "acsza1": 32, "acszb1": 32, "set_subfault": 32, "assign": [32, 34, 36, 88, 91, 97, 103], "coodin": 32, "pascal": [32, 158], "centerlin": 32, "respecitv": 32, "mix": [32, 41, 55, 75], "nctr": [32, 75], "upstrik": [32, 75], "updip": [32, 75], "calculate_geometry_triangl": 32, "triangular": [32, 48, 127], "lat": [32, 51, 55, 57, 63, 162, 164], "convert_to_standard_unit": 32, "measur": [32, 47, 49, 51, 75], "dynamic_slip": [32, 128], "rupture_tim": [32, 75], "rise_shap": 32, "gauss_pt": 32, "latitutd": 32, "modulu": [32, 102, 108, 150, 167], "shape": [32, 37, 42, 51, 63, 70, 89, 94, 97, 99, 106, 142, 164], "displac": [32, 36, 48, 49, 52, 75, 144, 151, 166], "1992": 32, "okadamap": 32, "rigin": 32, "dave": 32, "xiaom": 32, "wang": 32, "rewritten": 32, "dicuss": 32, "movement": 32, "sec": 32, "pw": [32, 34], "smooth": [32, 72, 104, 115, 167], "ruptur": [32, 48], "set_corn": 32, "projection_zon": 32, "iter": [32, 42, 70, 102], "1000000": 32, "x0": [32, 51], "orthogon": 32, "subdividedplanefault": 32, "base_subfault": 32, "nstrike": 32, "ndip": 32, "slip_funct": 32, "subdivid": [32, 75], "uniform": [32, 34, 36, 37, 48, 70, 75, 78, 89, 127, 162], "subdivis": 32, "slip_distribut": 32, "xi": [32, 167], "rescal": 32, "tensorproductfault": 32, "fault_plan": 32, "slip_along_strik": 32, "slip_down_dip": 32, "goe": [32, 48, 58], "constant": [32, 34, 36, 49, 52, 63, 68, 72, 99, 102, 140, 141, 142, 144, 151, 164, 167], "tensor": 32, "chen": [32, 166], "ji": [32, 166], "geol": 32, "edu": [32, 55, 97, 129], "faculti": 32, "big_earthquak": 32, "sea": [32, 47, 48, 50, 52, 55, 72, 75, 112, 123, 130, 143, 162, 164, 166], "floor": [32, 48, 75], "durat": [32, 132, 143], "slope": [32, 104, 132], "rf": [32, 58, 59], "bear": [32, 51, 118], "movabl": 32, "latlong": [32, 55], "happen": [33, 55, 66, 88, 103, 106, 130, 165], "filenam": [33, 55, 123, 135, 136, 164], "fgmax_tool": [34, 122, 130, 136, 151], "increment": [34, 47, 55, 94, 109, 148, 150, 152], "record": [34, 45, 47, 64, 106, 138, 158, 166], "observ": [34, 52, 119, 132, 143, 148, 151, 159, 166], "align": [34, 36, 42, 55, 63, 70, 130, 132, 151], "arbitrari": [34, 36, 63, 104, 119, 142, 151], "transect": [34, 51, 63, 118, 151], "coastlin": [34, 55, 70, 72, 130, 142, 151, 166], "quadrilater": [34, 63], "dem": [34, 48, 57, 63, 127, 162, 164, 166], "topo_typ": [34, 42, 49, 57, 63, 70, 123, 124, 127, 130, 162, 164], "point_styl": [34, 35, 70, 122], "fgmax_grid": [34, 35, 63, 130, 136, 151], "junction": 34, "purpos": [34, 36, 48, 52, 57, 65, 71, 77, 86, 94, 114, 116, 139, 142, 148], "maxima": [34, 76], "fgmax_data": [34, 151], "fgmaxgrid": [34, 35, 136, 151], "fgmax0001": 34, "fgno": [34, 35, 36, 37, 136], "sequenti": [34, 36], "fg_maxnum_fgrid": 34, "fgmax_modul": 34, "recomil": 34, "everyth": [34, 59, 62, 76, 99, 108, 109, 116, 127], "fg": 34, "tstart_max": 34, "tend_max": 34, "dt_check": 34, "min_level_check": 34, "arrival_tol": 34, "interp_method": 34, "npt": [34, 51], "xy_fil": 34, "regular": [34, 164], "cartesian": [34, 50, 63, 89, 151], "nx": [34, 36], "ny": [34, 36], "n12": 34, "n23": 34, "x3": [34, 63, 98], "y3": [34, 63, 98], "x4": [34, 63], "y4": [34, 63], "fourth": [34, 57], "perimet": 34, "intersect": [34, 49, 70, 75], "connect": [34, 49, 51, 58, 63, 70, 118, 130, 142], "expect": [34, 72, 102, 108, 109, 110, 116, 127, 128, 130, 132, 150, 151, 152, 158], "topofil": [34, 35, 49, 57, 63, 127, 128, 129, 130, 151, 162, 164], "south": [34, 49, 162], "preprocess": [34, 123], "satisfi": [34, 42, 70, 104, 115, 142, 170], "captur": [34, 47, 52, 64, 142, 162], "posit": [34, 42, 55, 75, 78, 109, 151, 162, 164], "digit": [34, 36, 42, 57, 63, 64, 82, 125, 126, 127, 164], "correspondingli": 34, "1e9": [34, 41, 64], "simul": [34, 38, 39, 40, 42, 50, 52, 55, 71, 72, 91, 94, 96, 98, 99, 101, 105, 108, 113, 125, 126, 127, 129, 142, 144, 158], "exce": [34, 55, 115, 149], "care": [34, 42, 48, 99], "start_max": 34, "natur": [34, 49, 58, 140, 170], "discard": [34, 104], "reiniti": [34, 125], "depress": 34, "margin": [34, 48], "fgmax_valu": 34, "eta_tild": 34, "speed": [34, 36, 37, 49, 88, 92, 102, 108, 118, 125, 130, 140, 141, 148, 151, 158, 159, 164, 167, 170], "harbor": 34, "ship": 34, "ground": [34, 75, 130], "fg_num_val": 34, "num_fgmax_v": [34, 151], "govern": [34, 151], "fgmax_interpol": 34, "fgmax_interpolate0": 34, "fgmax_interp": [34, 132], "unrealist": [34, 72], "island": [34, 42, 70, 142], "65": 34, "amr_levels_max": [34, 115, 149, 150], "8000": 34, "e10": 34, "stop": [34, 76, 82, 118, 119, 127, 150, 152, 164], "20": [34, 42, 53, 55, 57, 63, 70, 79, 82, 102, 115, 149, 150, 151, 162, 164], "const": 34, "fg1": 34, "valuemax": 34, "aux1": 34, "fgmax0002": 34, "explicitli": [34, 67, 71, 96, 132, 148, 165, 170], "dealt": [34, 42], "read_output": [34, 35, 136], "paragraph": 34, "qoi": [34, 37], "2n": 34, "hmin": 34, "13": [34, 47, 161], "99999000e": 34, "99": [34, 150, 152], "never": [34, 72, 101, 106, 112, 115, 130, 142, 148, 150, 152, 165], "met": [34, 65, 86], "make_input_fil": 34, "readm": [34, 36, 58, 59, 130, 140, 146, 167], "chile2010_fgmax": [34, 36, 135], "bound": [35, 37, 89, 92, 99, 136, 142, 148, 164], "interp_dz": 35, "dtopo_path": 35, "b0": [35, 37], "event": [35, 48, 52, 63, 65, 75, 86, 143, 144, 148], "ps4_to_arrai": 35, "mask": [35, 42, 48, 53, 142, 164], "topo_styl": 35, "xy_fnam": 35, "read_fgmax_grids_data": 35, "data_fil": [35, 37], "ij": [35, 136], "xy": [35, 63, 136], "layout": [35, 58, 136], "unexpect": [35, 51, 55, 63, 66, 158], "indent": [35, 51, 63], "quot": [35, 63], "unind": [35, 63, 158], "topotool": [35, 42, 48, 51, 57, 63, 70, 120, 121, 122, 123, 124, 127, 128, 133, 136, 162, 163], "write_to_fgmax_data": 35, "fid": [35, 37], "adjust_fgmax_1d": 35, "x1_desir": 35, "x2_desir": 35, "x1_domain": 35, "x1_new": 35, "x2_new": 35, "npoint": 35, "linspac": [35, 71, 91, 108, 142], "fgout_tool": [36, 151], "complement": 36, "coincid": 36, "wherea": [36, 47, 55, 72, 81, 99], "occur": [36, 66, 75, 158, 159], "signific": [36, 68, 135, 138, 143, 164], "increas": [36, 37, 47, 55, 63, 76, 142, 151], "degrad": 36, "had": [36, 47, 56, 57, 125, 126, 127, 128, 132, 144], "tempor": [36, 47, 64], "seri": [36, 47, 64, 72, 158], "fact": [36, 55, 72, 97, 106, 110, 115, 144], "gauag": 36, "massless": 36, "tracer": [36, 141], "debri": 36, "fixedgrid": [36, 48, 135, 137], "carri": 36, "throughout": [36, 72, 125], "fgout_data": [36, 151], "fgout_grid": [36, 37, 63, 151], "fgoutgrid": [36, 37, 151], "runtim": [36, 109], "binary32": [36, 47, 77, 97, 135, 148, 150, 152], "200": [36, 55, 88, 108, 123, 152], "250": 36, "115": 36, "55": 36, "tstart": [36, 104], "tend": [36, 42, 104], "nout": [36, 77, 152], "37": [36, 51], "ascii": [36, 47, 57, 71, 88, 91, 98, 103, 125, 135, 136, 139, 148, 150, 152, 162, 168], "binary64": [36, 47, 77, 97, 135, 148, 150, 152], "float64": [36, 135, 148], "kind": [36, 91, 93, 98, 118, 129, 135, 140, 148], "float32": [36, 135, 148], "dump": [36, 77, 97, 135, 136, 148], "raw": [36, 97, 135, 148], "almost": [36, 148, 154], "precis": [36, 37, 44, 47, 63, 77, 89, 94, 97, 140, 148, 164], "fgout0001": 36, "t0000": [36, 71], "q0000": [36, 71, 148], "b0000": 36, "amr_level": [36, 77], "hierarchi": [36, 55, 94, 111], "file_prefix": [36, 97, 103, 135], "easier": [36, 62, 81, 125, 127, 142, 167], "manipul": [36, 47, 164], "fgframe": 36, "read_fram": [36, 37], "lazi": 36, "hss": [36, 37], "plottool": [36, 42, 70, 130], "pcolorcel": [36, 42, 70, 130, 142], "minimalist": 36, "geoplot": [36, 53, 55, 83], "cmap": [36, 42, 55, 63, 70, 82, 142, 164], "land_color": 36, "masked_wher": 36, "eta_plot": 36, "tsunami_colormap": 36, "overlap": [36, 115, 119, 120, 162], "fgout_interp": 36, "fgout_modul": 36, "unphys": 36, "intepol": 36, "fgout_writ": 36, "fgoutfram": 37, "make_fgout_fcn_xi": 37, "make_fgout_fcn_xyt": 37, "write_netcdf": 37, "read_netcdf": [37, 42, 70, 127, 128, 162, 164], "reconstruct": [37, 96, 104, 158], "read_netcdf_arrai": 37, "extract": [37, 55, 97, 136, 158, 164, 166], "print_netcdf_info": 37, "drytol": 37, "extent_cent": 37, "extent": [37, 41, 42, 52, 60, 63, 68, 70, 71, 88, 94, 106, 119, 132, 142, 162, 164], "extent_edg": 37, "read_fgout_grids_data": 37, "set_plotdata": 37, "write_to_fgout_data": 37, "get_as_arrai": 37, "rootgrp": 37, "bounds_error": 37, "fill_valu": [37, 97, 164], "nan": [37, 51, 164], "behavior": [37, 48, 58, 72, 115, 116, 124, 130, 132, 154], "regulargridinterpol": 37, "fgout1": 37, "fgout2": 37, "method_xi": 37, "method_t": 37, "linearli": 37, "fname_nc": 37, "contin": 37, "bfinal": 37, "qoi_arrai": 37, "fgout_fram": 37, "nc": [37, 42, 70, 127, 158, 162], "datatyp": 37, "f4": 37, "include_b0": 37, "include_bfin": 37, "metadata": [37, 77, 162, 164], "f8": 37, "byte": [37, 47, 77, 97], "twice": [37, 55, 139, 148], "downstream": 37, "field": [37, 47, 63, 101, 103, 106, 125, 127, 135, 158, 159], "first_test": 38, "euler_2d": [38, 40, 96, 101], "shock_bubble_interact": [38, 40, 93, 96, 105], "iplot": [38, 40, 93, 96, 99], "That": [38, 40, 42, 108, 162], "ensur": [38, 39, 40, 71, 113], "install_prerequisit": 38, "acoustics_1d_example1": [38, 39, 74], "statement": [38, 39, 71, 77, 110, 111, 118, 125, 134, 150], "troubl": [38, 39, 81, 96], "xclaw": [38, 39, 91], "plotting_makeplot": [38, 39], "fortfil": [38, 39], "install_fortran": 39, "prerequisit": [39, 40, 48, 60, 62, 118], "sv": [39, 160], "runtest": [39, 99, 160], "acoustics_1d_heterogen": [39, 160, 167], "regression_test": [39, 160], "acoustics1dheterogeneoustest": [39, 160], "acoustics_3d_heterogen": [39, 160], "acoustics3dheterogeneoustest": [39, 160], "advection_2d_annulu": [39, 160], "advection2dannulustest": [39, 160], "ran": [39, 160], "639": [39, 160], "manual": [40, 89, 98, 105, 107, 116, 160], "launch": [40, 93, 99, 100, 105], "setup": [40, 59, 88, 89, 93, 96, 99, 101, 104, 105, 106, 114, 146, 165], "regiondata": [41, 115, 150, 151], "minlevel": [41, 115, 132, 142, 149, 150, 151], "maxlevel": [41, 71, 115, 132, 142, 149, 150, 151], "clariti": 41, "ultim": 41, "flagregiondata": [41, 130], "everywher": [41, 42, 51, 68, 106, 144], "supplement": [41, 70, 153], "rundatat": 41, "region_domain": 41, "spatial_region_typ": 41, "spatial_region": 41, "restrict": [41, 55, 127, 142, 151, 162], "insid": [41, 94, 99, 103, 140, 142, 164], "trapezoid": 41, "region_trapezoid": 41, "spatial_region_fil": 41, "ruledrectangle_trapezoid": 41, "region_tool": [41, 42, 70, 130, 131, 142], "rr": [41, 70, 71, 84, 142], "ruledrectangl": [41, 70, 130, 142], "piecewiselinear": 41, "ixi": [41, 70, 140, 142], "advection_2d_flagregion": 41, "constraint": [42, 47, 142, 149, 170], "dike": [42, 70, 130, 151], "creation": [42, 82, 96, 119], "even": [42, 52, 55, 62, 65, 75, 86, 97, 109, 115, 130, 149, 150, 162, 165, 167], "inlin": [42, 141], "marching_front": [42, 70, 130], "zmin": [42, 70], "60": [42, 55, 70, 75, 76, 130, 149], "zmax": [42, 70], "40": [42, 55, 70, 77, 115, 151, 161], "land_cmap": 42, "make_colormap": [42, 70, 82], "sea_cmap": 42, "norm": [42, 63, 70, 115, 164], "add_colormap": [42, 70, 124, 130], "data_limit": [42, 70], "data_break": [42, 70, 164], "sea_cmap_dri": 42, "cmap_dri": [42, 70], "norm_dri": [42, 70], "sw": [42, 57, 70, 141], "coast": [42, 70, 115, 144, 164], "whidbei": [42, 70, 142], "maxwelton": [42, 70], "beach": [42, 70, 141], "marchingfront": 42, "region1_png": [42, 70], "imread": [42, 70], "region1": [42, 70], "46": [42, 70, 164], "38": [42, 70], "47": [42, 70, 142], "93": [42, 70, 124], "96": [42, 70], "imshow": [42, 70, 118, 164], "48": [42, 55, 70, 142], "puget": [42, 70, 142], "sound": [42, 70, 88, 102, 108, 142], "ncei": [42, 70, 143, 162, 166], "thredd": [42, 70, 162, 166], "ngdc": [42, 70, 143], "dodsc": [42, 70], "puget_sound_13_mhw_2014": [42, 70], "colorbar": [42, 63, 70, 127, 130, 142, 147, 164], "mhw": [42, 48, 52, 143, 162, 166], "wetland": [42, 70], "lake": [42, 48, 70, 144, 151, 162], "repeat": [42, 70, 84, 139, 149, 151], "wet_point": [42, 70], "select_by_flood": [42, 70], "z1": [42, 70], "z2": [42, 70], "max_it": [42, 70], "zdry": [42, 70], "masked_arrai": [42, 70, 142], "279936": [42, 70], "112": [42, 70], "59775": [42, 70], "mislead": [42, 72], "pink": [42, 63, 82, 147], "distinguish": 42, "wet": [42, 48, 70, 72, 142, 151], "mask_dri": 42, "logical_not": [42, 70], "z_dry": 42, "mask_dry_onshor": 42, "logical_and": [42, 70], "z_allow_wet": 42, "rotat": [42, 49, 53, 136], "dry_point": 42, "shorelin": [42, 55, 164], "inland": [42, 70, 151], "sum": [42, 47, 75, 98, 106, 161], "3x3": 42, "dry_points_sum": 42, "reset": [42, 44, 58, 109], "white_r": 42, "461": 42, "379": 42, "929": 42, "961": 42, "z_format": [42, 70, 164], "1i": [42, 70], "fuction": 42, "set_xyz": [42, 164], "force_dry_init_topo": 42, "_y": [42, 70, 164], "_z": [42, 70, 164], "generate_2d_coordin": [42, 70, 164], "fname_force_dry_init": 42, "864": 42, "ncol": [42, 123], "324": 42, "nrow": 42, "224599074275750e": 42, "02": [42, 63, 97, 102, 150], "793009258334999e": 42, "259259000800000e": 42, "05": [42, 92, 102], "cellsiz": [42, 57, 123, 162], "9999": [42, 57, 162, 164], "nodata_valu": [42, 164], "forcedri": [42, 151], "force_dri": [42, 63, 130], "fname": [42, 63, 132, 142, 150, 151, 152], "qinit_data": [42, 144, 151], "force_dry_list": [42, 151], "setprob": [42, 67, 150, 152, 167], "qinit_modul": 42, "filval": 42, "t_stays_dri": 42, "gotten": 42, "offer": [43, 55, 116], "Or": [43, 63, 84, 142, 164], "dot": [43, 47, 55, 63, 66, 165], "unix": [43, 74], "invis": [43, 123], "encount": [43, 55, 82, 105, 107], "catch": [43, 96], "bash": [44, 55, 61, 62, 71, 76, 99, 111, 146], "export": [44, 55, 61, 62, 71, 76, 99, 107, 146], "f77": [44, 165], "compliant": 44, "yourself": [44, 47, 61], "rerun": [44, 47, 57, 59, 62], "scan": 44, "abil": [44, 118, 123, 125, 129, 158, 164], "meant": [44, 94, 104, 158], "pedant": 44, "fbound": 44, "ffpe": 44, "trap": 44, "invalid": [44, 103], "overflow": [44, 118, 126], "optim": [44, 86, 109], "o2": [44, 76], "fopenmp": [44, 76, 109], "dnetcdf": [44, 162], "lnetcdf": 44, "netcdf4_dir": 44, "ifort": 44, "cb": 44, "cu": 44, "fpe0": 44, "ftrapuv": 44, "fp": 44, "qopenmp": 44, "omp_num_thread": [44, 76, 125, 161], "thread": [44, 76, 115, 130, 161], "2006": [45, 151], "playlist": 45, "pressur": [47, 71, 84, 98, 102, 108, 126, 127, 151, 158, 159], "tide": [47, 48, 51, 127, 143, 164], "behav": [47, 49], "difficult": 47, "clearli": [47, 52, 55, 142], "accuraci": [47, 68, 78, 150, 152], "nonphys": 47, "oscil": [47, 170], "prior": [47, 64, 65, 86, 138, 144, 150, 152, 167], "gaugedata": [47, 64, 150], "gaugeno": [47, 64, 150], "meqn": [47, 77, 140, 167], "varieti": [47, 91], "basi": [47, 71], "file_format": [47, 97, 103, 135, 158], "smallest": [47, 115, 142], "reduct": [47, 118], "display_format": [47, 64], "e15": 47, "q_out_field": 47, "aux_out_field": 47, "min_time_incr": [47, 64], "amount": [47, 52, 58], "decreas": [47, 144, 162], "effect": [47, 55, 68, 71, 94, 98, 115, 116, 143, 151, 154, 164], "turn": [47, 50, 52, 63, 79, 82, 98, 116, 124, 130, 135], "id": [47, 51, 103], "e26": 47, "16": [47, 55, 63, 75, 94, 142, 148], "e8": 47, "multilay": [47, 120, 123, 126, 127, 128], "accumul": [47, 125, 139], "intermit": [47, 125], "max_buff": [47, 125], "gauges_modul": [47, 123, 125], "distinct": [47, 125], "gauge00001": [47, 64, 125], "quickli": [47, 58, 63, 90, 125, 144, 164], "overwritten": [47, 97, 98, 125, 139, 167], "gaugexxxxx": [47, 125, 139], "monoton": [47, 148, 151], "pars": [47, 109], "gaugesolut": 47, "gauge_id": 47, "getgaug": 47, "plotfigur": [47, 82, 118, 147], "300": [47, 142], "each_gaug": 47, "1d_plot": [47, 82, 84, 147], "setgaug": [47, 124], "each_fram": 47, "plotclaw": [47, 81, 82, 84, 147], "plotgaug": 47, "loop": [47, 71, 81, 109, 115, 118, 127, 130, 132, 140, 144, 147, 148, 167], "cleargaug": 47, "_output_from_previous_run": 47, "2d_pcolor": [47, 55], "addgaug": 47, "plot_gauge_loc": 47, "format_str": 47, "ko": 47, "add_label": 47, "overview": [48, 55, 81, 117, 121, 130], "teach": [48, 52, 114], "guarante": [48, 52, 104, 114], "liabil": [48, 52, 65, 86, 114], "underwat": [48, 55], "robust": [48, 127, 141, 164], "gallery_geoclaw": 48, "dtopotool": [48, 75, 121, 122, 124, 127, 128, 162, 163], "kmltool": [48, 51, 130, 131, 133, 163], "geo": [48, 68], "chile": [48, 63, 75], "2010": [48, 63, 75, 151], "dart": 48, "buoi": 48, "previous_pts_chosen": 48, "arcsecond": [48, 162], "force_dry_init": [48, 130], "topograpi": [48, 162], "wide": [49, 62, 111, 141], "insur": [49, 54, 58, 66, 84, 115, 119, 123, 149, 151, 162], "contrast": [49, 57, 142], "newli": 49, "roughli": [49, 56, 142, 161], "transit": [49, 136, 137], "sometim": [49, 62, 66, 70, 78, 82, 88, 98, 118, 127, 134, 143, 144, 151, 159, 166], "prefer": [49, 63, 99, 101, 146, 149, 158], "topo1d": 49, "1d_classic": [49, 118], "geo_data": [49, 64, 137, 151, 154], "rotation": 49, "geometr": [49, 154, 167], "spread": 49, "crater": 49, "endpoint": 49, "pole": 49, "ordinari": [49, 140], "Near": 49, "disturb": [49, 55], "decai": 49, "refocu": 49, "grid_data": 49, "grid_typ": 49, "te": 49, "nonuniform": [49, 71], "fname_celledg": 49, "nonuniform_grid_tool": 49, "make_mapc2p": 49, "deeper": [49, 142, 151, 162], "ocean_shelf_beach": 49, "topo_data": [49, 151], "topofile_path": 49, "dtopo_data": [49, 119, 151], "dtopofil": [49, 63, 75, 151], "dtopofile_path": 49, "mt": [49, 162], "okada_dtopo": 49, "dms2decim": 51, "decim": [51, 63], "dist_meters2latlong": 51, "dist_latlong2met": 51, "haversin": 51, "great": [51, 93, 118], "inv_haversin": 51, "invert": 51, "gctransect": [51, 118], "fetch_noaa_tide_data": 51, "predict": 51, "y0": 51, "bearing_unit": 51, "radian": 51, "beta": [51, 92, 104, 152], "sin": [51, 82], "longitudin": 51, "latitudin": 51, "coord": [51, 55], "negat": [51, 162], "30": [51, 55, 57, 115, 149, 151, 162], "51": 51, "span": [51, 55, 63], "station": [51, 143, 166], "begin_d": 51, "end_dat": 51, "time_zon": 51, "gmt": 51, "datum": [51, 52, 102, 143, 151, 166], "stnd": 51, "metric": 51, "cache_dir": 51, "begin": [51, 63, 94, 98, 102, 108, 141, 158], "op": 51, "api": [51, 127], "tidesandcurr": 51, "scratch": [51, 70, 108], "charact": 51, "datetim": [51, 158], "date_tim": 51, "ndarrai": [51, 92, 94, 102, 106, 158, 164], "water_level": 51, "preliminari": [51, 127, 166], "verifi": [51, 109, 116, 166], "rearth": 51, "6367500": 51, "pm": 51, "tohoku": 51, "crescent": 51, "citi": 51, "xtran": [51, 63], "ytran": [51, 63], "142": 51, "124": 51, "41": [51, 161], "74": [51, 55], "transect2kml": [51, 63], "kml": [51, 63, 123, 125, 126, 127, 130, 131, 142], "formula": [51, 68, 144], "stackexchang": 51, "1783746": 51, "rsphere": [51, 89], "believ": [52, 110, 125, 130], "real": [52, 59, 68, 109, 140, 166], "world": [52, 68, 96, 99, 158], "intend": [52, 89, 127], "approv": 52, "nhtmp": 52, "benchmark": 52, "nthmp": 52, "awar": [52, 99], "scenario": [52, 143], "invest": 52, "learn": [52, 93, 110], "geohazard": 52, "geoscientist": 52, "expert": 52, "cautiou": 52, "sensit": [52, 68], "confirm": 52, "imposs": [52, 148], "encapsul": 52, "knowledg": 52, "inaccuraci": 52, "uncertainti": [52, 68], "subduct": [52, 75], "zone": [52, 55, 63, 149, 150], "understood": 52, "turbul": [52, 104], "bore": 52, "inaccur": 52, "becom": [52, 107, 170], "agreement": 52, "caution": 52, "empir": [52, 68], "corioli": [52, 151, 156, 157], "littl": [52, 75, 97, 143], "coriolis_forc": [52, 151], "know": [52, 62, 66, 75, 86, 113, 126, 130, 132, 140, 143, 164, 165, 166], "upward": 52, "realiti": 52, "hard": [53, 58, 76, 82, 164], "disabl": [53, 97, 105, 151], "plain": 53, "mean_latitud": 53, "hash": [54, 58, 116], "print_git_statu": 54, "git_statu": 54, "power": [55, 60, 81], "georeferenc": 55, "simultan": [55, 125], "gi": [55, 125, 162], "critic": [55, 98, 140], "decis": 55, "nevertheless": 55, "lxml": 55, "pykml": 55, "conda": 55, "pyramid": 55, "geospati": 55, "abstract": 55, "osx": [55, 85], "macport": 55, "homebrew": [55, 85], "gdal_data": 55, "gc": 55, "cv": [55, 71], "epsg": 55, "wkt": 55, "georefer": 55, "warp": 55, "anaconda": [55, 105], "gdal_test": 55, "frame0005fig1": 55, "1440": 55, "1440p": 55, "1440l": 55, "frame0005fig1_tmp": 55, "vrt": 55, "band": [55, 164], "destin": 55, "100": [55, 75, 88, 91, 94, 103, 106, 108, 124, 127, 142, 152, 164], "receiv": [55, 116], "libgdal": 55, "dylib": 55, "liblzma": 55, "xz": 55, "setplot_fil": 55, "setplot_kml": 55, "chile_2010": 55, "slider": [55, 63], "panel": 55, "chile2010": [55, 114, 115, 119, 122, 128, 162], "kml_name": 55, "kml_starttim": 55, "utc": [55, 63], "kml_tz_offset": 55, "kml_index_fnam": 55, "_googleearth": 55, "kml_user_fil": 55, "santiago": 55, "kml_publish": 55, "kml_map_topo_to_latlong": 55, "sidebar": [55, 58], "kml_timezon": 55, "japan": [55, 63], "address": [55, 58, 125], "host": 55, "kml_xlimit": 55, "kml_ylimit": 55, "kml_use_figure_limit": 55, "member": [55, 101, 103, 108], "googleearth": [55, 63], "placemark": 55, "geograph": 55, "viewabl": [55, 91], "remain": [55, 62, 101, 109, 111, 119, 156, 157, 158], "use_for_kml": 55, "120": 55, "kml_use_for_initial_view": 55, "kml_figsiz": 55, "kml_dpi": [55, 63], "kml_tile_imag": 55, "longitude_min": 55, "longitude_max": 55, "latitude_min": 55, "latitude_max": 55, "camera": 55, "size_x_inch": 55, "size_y_inch": 55, "dpi": [55, 63], "pixel": [55, 63], "qualiti": [55, 131], "backend": 55, "furthermor": [55, 108], "pseudo": [55, 71], "height": [55, 102, 164], "transpar": [55, 63], "surface_or_depth": [55, 83], "cmin": [55, 63], "googleearth_transpar": 55, "kml_colorbar": 55, "cmax": [55, 63], "kml_build_colorbar": [55, 63], "alter": 55, "occupi": 55, "contourf": [55, 81], "googleearth_lightblu": 55, "googleearth_darkblu": 55, "appeal": 55, "overlaid": [55, 63], "ridg": 55, "lighter": 55, "darker": 55, "folder": 55, "hide": [55, 71], "unalt": 55, "map_topo_to_latlong": 55, "contan": 55, "referenc": [55, 138, 143, 162], "un": 55, "unzip": 55, "zipinfo": 55, "groundoverlai": 55, "edit": [55, 58, 59, 62, 84], "entri": [55, 64, 88, 98, 109, 158], "low": [55, 70, 89, 164, 166], "unapp": 55, "8x6": 55, "1600": [55, 77], "1200": 55, "notic": [55, 65, 86, 108, 116], "stripe": 55, "plaid": 55, "neither": [55, 63, 65, 86, 125], "evenli": [55, 98], "30x30": 55, "360x360": 55, "baselin": 55, "unaccept": 55, "sharper": [55, 63], "32768": 55, "accordingli": [55, 162], "subject": [55, 70, 115, 149, 151], "round": 55, "prevent": 55, "118": 55, "116": [55, 122], "18": [55, 102, 120, 121, 138], "rcl": 55, "1200x1680": 55, "overland": 55, "flood": [55, 70, 144], "topograph": 55, "longtitud": 55, "crucial": [55, 162], "assumpt": [55, 58], "48000": 55, "17540": 55, "map_cart_to_latlong": 55, "xc": [55, 108], "yc": 55, "topo_xlim": 55, "ge_xlim": 55, "111": [55, 125], "96132553": 55, "36256443": 55, "slope_x": 55, "xp": [55, 89], "topo_ylim": 55, "17500": 55, "ge_ylim": 55, "43": 55, "79453362": 55, "95123268": 55, "slope_i": 55, "yp": [55, 89], "teton": 55, "dam": [55, 144], "collabor": [55, 153], "weight": 55, "boisest": 55, "detect": [55, 66, 97, 105, 109, 165], "clawpack_gpu": 56, "cpp": 56, "cannot": [56, 62, 97, 132, 144, 158], "comparison": 56, "motlei": 56, "1029": 56, "2019ms001635": 56, "acceler": [56, 102], "arxiv": 56, "1808": 56, "02638": 56, "tree": [56, 62, 101, 146], "geo_gpu_pap": 56, "esri": [57, 162], "wikipedia": 57, "tell": [57, 77, 82, 88, 97, 111, 116], "llcorner": [57, 162, 164], "llcenter": [57, 162, 164], "xllcenter": [57, 127, 162], "yllcenter": [57, 127, 162], "nodatavalu": [57, 162], "3000": [57, 162], "4000": [57, 162], "xllcorner": [57, 162], "yllcorner": [57, 162], "smoothli": [57, 72], "our": [57, 67, 88, 113], "represent": [57, 94, 97, 103, 109, 164], "grid_registr": [57, 164], "crop": [57, 164], "coarsen": [57, 115, 127, 128, 149, 162, 164], "subsampl": [57, 162, 166], "coarsen_method": 57, "lon": [57, 162], "md": [58, 59, 127, 146], "intersphinx": 58, "documen": 58, "retir": 58, "conf": [58, 59], "mess": 58, "ff": [58, 63], "hasn": 58, "improperli": 58, "html_theme": 58, "_theme": 58, "flask_loc": 58, "_static": 58, "clawlogo": 58, "jpg": [58, 71], "logo": [58, 126], "clawicon": 58, "ico": 58, "icon": 58, "_templat": [58, 59], "literalinclud": 58, "setaux_default": 58, "rst": [58, 59, 130], "_build1": 58, "rebuilt": 58, "rebuild": 58, "multivers": 58, "sphinxcontrib": 58, "_build": 58, "smv_branch_whitelist": 58, "cp": [58, 59, 74], "fix_links_top_level": 58, "sphinx_web": 58, "decoupl": 58, "resid": [58, 66, 94], "remak": 58, "rsync": 58, "azv": 58, "extra_fil": 58, "cname": 58, "godaddi": 58, "verbatim": 58, "recurs": [58, 59, 74, 119], "rsync_clawpack": 58, "clawdev2013": 58, "redirect": 58, "an11": 58, "geoclawdev": 58, "clawdev": 58, "offici": [59, 85, 127], "subrepo": 59, "__init__": [59, 101, 111, 136], "1rc": 59, "rc": 59, "kentzo": 59, "prefix": [59, 91, 97, 98, 103], "gzip": [59, 97, 130], "draft": 59, "gz": [59, 61], "attach": [59, 97, 106], "upstream": 59, "repo": 59, "permiss": [59, 62, 65, 86], "trickeri": 59, "temp": 59, "mv": 59, "xf": 59, "python3": [59, 111, 126, 132, 137], "sdist": 59, "dist": 59, "xzf": [59, 61], "pkg": [59, 152], "cf": [59, 162], "upload": 59, "testpypi": 59, "twine": 59, "credenti": 59, "okai": 59, "pip3": 59, "uninstal": [59, 62, 111], "dir": [59, 99, 168], "820730": [59, 138], "changes_to_mast": 59, "release_5_x_x": 59, "5_x_x": 59, "installing_pip": 59, "installing_fortcod": 59, "docker_imag": 59, "ideal": [59, 102, 143], "sept": [59, 132], "regist": 60, "untar": 61, "pythonpath": [61, 62], "pypi": [62, 97], "think": [62, 68, 70, 72, 102], "clawpack_src": [62, 111], "egg": 62, "f2py": [62, 78, 89, 96, 101, 109, 140], "installing_opt": 62, "mechan": [62, 106, 138], "fc": [62, 89, 107, 109, 118, 165], "comfort": [62, 101], "claw_vers": 62, "wrong": [62, 67, 71, 98, 111], "pth": 62, "went": [62, 141], "overlai": [63, 133], "bgr": 63, "hex": [63, 82], "00ff00": 63, "yellow": [63, 82], "deg2dm": 63, "regions2kml": 63, "outlin": [63, 71, 84, 130, 140, 147], "box2kml": 63, "quad2kml": 63, "poly2kml": 63, "line2kml": 63, "gauges2kml": 63, "marker": 63, "topo2kml": 63, "dtopo2kml": 63, "fgmax2kml": [63, 130], "fgout2kml": 63, "make_input_data_kml": 63, "pcolorcells_for_kml": [63, 130], "pcolormesh": [63, 70], "png2kml": 63, "wrap": [63, 86, 89, 94, 104, 109, 158], "ge": 63, "topo2kmz": [63, 133], "kmz": [63, 125], "offshor": [63, 68, 70, 142, 144], "kml_header": 63, "kml_footer": 63, "kml_region": 63, "kml_gaug": 63, "kml_png": 63, "kml_cb": 63, "aabbggrr": 63, "dtopo_file_nam": 63, "8888ff": 63, "f2": 63, "num_digit": 63, "trail": 63, "NOT": [63, 65, 82, 86], "cb_filenam": 63, "close_fig": 63, "nrm": 63, "kml_timespan": 63, "event_tim": 63, "tz": 63, "tscale": 63, "timespan": 63, "27t06": 63, "00": [63, 77, 150], "03": [63, 102], "27t07": 63, "04": [63, 94, 102], "daylight": 63, "dst": 63, "timezon": 63, "magic": 63, "tabl": [63, 68, 81, 97], "wisdom": 63, "00ffff": 63, "png_filenam": 63, "dpc": 63, "max_inch": 63, "sharp": 63, "x_edg": [63, 142], "y_edg": [63, 142], "allot": 63, "smear": 63, "slowli": 63, "x_inch": 63, "y_inch": 63, "dcp": 63, "x_cell": 63, "y_cell": 63, "fig": [63, 142], "png_extent": 63, "savefig": [63, 135], "construc": 63, "png_file": 63, "png_name": 63, "radio_styl": 63, "cb_file": 63, "cb_name": 63, "cb_xfrac": 63, "cb_yfrac": 63, "radio": 63, "poli": 63, "max_vertices_in_descript": 63, "quad": 63, "region00": 63, "topo_file_nam": 63, "zlim": 63, "mask_outside_zlim": 63, "eas": [63, 136], "outsiz": 63, "pyplot": [63, 141, 164], "xg": 64, "yg": 64, "stationari": [64, 162], "huge": [64, 70, 144, 162], "frequenc": [64, 75, 104], "ug": 64, "vg": 64, "dt": [64, 89, 94, 98, 104, 118, 148, 150, 152, 162, 167], "euler": [64, 96, 104, 121, 123, 126, 128, 140, 167], "gtype": 64, "particle_tool": [64, 130], "opensourc": [65, 86], "copyright": [65, 86], "reserv": [65, 86], "redistribut": [65, 86], "permit": [65, 86], "retain": [65, 86, 97], "disclaim": [65, 86], "nor": [65, 86], "endors": [65, 86], "promot": [65, 86], "BY": [65, 86], "THE": [65, 86], "holder": [65, 86], "AND": [65, 86], "AS": [65, 86], "OR": [65, 86, 158], "impli": [65, 86, 151], "warranti": [65, 86], "BUT": [65, 86], "OF": [65, 86], "merchant": [65, 86], "fit": [65, 86], "FOR": [65, 86], "IN": [65, 86], "NO": [65, 86], "shall": [65, 86], "BE": [65, 82, 86], "liabl": [65, 86], "indirect": [65, 86], "incident": [65, 86], "exemplari": [65, 86], "consequenti": [65, 86], "procur": [65, 86], "substitut": [65, 86], "loss": [65, 86], "profit": [65, 86], "busi": [65, 86], "interrupt": [65, 86], "ON": [65, 82, 86], "strict": [65, 86], "tort": [65, 86], "neglig": [65, 76, 86, 151], "aris": [65, 86, 118], "IF": [65, 86, 151], "advis": [65, 86], "SUCH": [65, 86], "isn": [66, 76, 77, 165], "bomb": [66, 76], "abort": 66, "claw_outdir": [66, 82], "regener": 66, "safer": 66, "run1": 66, "suffix": [66, 164], "conlict": 66, "advection_1d_example1": 67, "classic_1d": 67, "exclud": 67, "exclude_modul": 67, "exclude_sourc": 67, "rp1_advect": 67, "lib": [67, 111], "common_sourc": 67, "bc1": [67, 109], "claw1ez": 67, "claw1": [67, 109], "copyq1": 67, "inlinelimit": 67, "opendatafil": 67, "out1": 67, "src1": [67, 157, 167, 170], "step1": 67, "wouldn": 67, "spite": [67, 70, 111], "bc1_inflow": 67, "matter": [67, 123], "_t": 68, "cdot": [68, 101, 142], "gamma": [68, 102], "frac": [68, 102, 108, 170], "gn": 68, "gravit": [68, 102, 151, 167], "rough": 68, "terrain": 68, "seab": 68, "025": [68, 151], "enhanc": [68, 86, 127], "threshold": 68, "friction_depth": [68, 151], "runup": 68, "discov": 68, "expon": 68, "arithmet": 68, "3333": 68, "d0": 68, "inadequaci": 68, "ztopo": 70, "pt_chosen": 70, "protect": [70, 130], "levi": [70, 130, 151], "unset": [70, 115], "geq0": 70, "force_dry_arrai": 70, "prev_pts_chosen": 70, "unchosen": 70, "converg": [70, 81], "pts_chosen": [70, 142], "touch": 70, "preserv": [70, 78, 104], "zmask": 70, "subtleti": 70, "ruledrectangle_covering_selected_point": [70, 142], "stretch": [70, 164], "farther": 70, "cmap_land": 70, "cmap_sea": 70, "cmap_topo": 70, "norm_topo": 70, "cmap_sea_dri": 70, "cultu": 70, "bai": [70, 143, 166], "183": 70, "89871": 70, "steep": [70, 170], "fist": 70, "1e6": 70, "arbitrarili": 70, "06": [70, 151], "84800": 70, "augment": [70, 141], "163": 70, "94297": 70, "pts_chosen_shallow": 70, "177": 70, "249577": 70, "zshallow": 70, "pts_chosen_nearshor": 70, "znearshor": 70, "compact": [70, 162], "fname_fgmax_mask": 70, "fgmax_pts_topostyl": 70, "topo_fgmax_mask": 70, "fewer": [70, 115, 164], "121": [70, 142], "pad": 70, "xv": [70, 142], "yv": [70, 142], "925": 70, "965": 70, "69788": 70, "76005": 70, "barrier": [70, 109], "mathwork": 71, "manifold": 71, "isosurfac": 71, "border": [71, 167], "cube": 71, "matlabpath": 71, "perman": [71, 118, 130, 131, 132, 133, 134, 135, 136, 137], "pathtool": 71, "q0001": 71, "t0001": 71, "enter": [71, 97, 99, 105], "plotclaw1": 71, "plotclaw2": 71, "plotclaw3": 71, "_": [71, 82, 101, 102, 113, 164, 170], "setplot2": 71, "ye": 71, "success": [71, 103, 164, 167], "0625": 71, "keyboard": 71, "redraw": [71, 84], "setplot1": 71, "setplot3": 71, "Such": 71, "rho": [71, 102, 108, 150], "rhou": 71, "rhov": 71, "outputdir": 71, "plottyp": 71, "mq": 71, "uservari": 71, "uservariablefil": 71, "temporarili": 71, "encourag": 71, "daspect": 71, "showpatchbord": 71, "showgridlin": 71, "gridlin": 71, "drawcontourlin": 71, "caxi": 71, "shg": 71, "fstr": 71, "framenam": 71, "frame0000": 71, "dpng": 71, "aftergrid": 71, "topic": 71, "clawgraph": 71, "t0002": 71, "doubl": [71, 89, 94, 109, 140, 149], "xxxx": 71, "unpredict": 71, "clash": 71, "strongli": [71, 110], "overridden": [71, 104, 106], "nearbi": [72, 143], "delta": [72, 92, 94, 101, 104, 140, 164, 167, 170], "polynomi": [72, 140], "a_0": 72, "a_1x": 72, "a_2i": 72, "a_3xi": 72, "greatest": [72, 115], "midpoint": [72, 94], "conclud": 72, "intact": [74, 124], "newdir": 74, "moreov": 75, "superposit": 75, "halfspac": 75, "rock": 75, "km": [75, 143], "shallowest": 75, "orient": [75, 89], "downward": 75, "counterclockwis": 75, "hang": 75, "foot": 75, "closer": [75, 150], "instati": [75, 164], "450": 75, "e3": 75, "104": 75, "668": 75, "826": 75, "chile_dtopo": 75, "tt3": [75, 164], "arcminut": [75, 162], "simplifi": [75, 81, 82, 97, 116, 126, 127, 167], "recangl": 75, "translat": 75, "homogen": [75, 104, 167, 170], "steadi": [75, 162], "rare": [75, 125], "flat": 75, "isotrop": 75, "justifi": 75, "poisson": 75, "triangl": 75, "multicor": [76, 125], "stack": [76, 85, 123, 142], "omp_stacks": 76, "16m": 76, "ulimit": 76, "unlimit": [76, 97], "mac": [76, 85, 107, 116, 146], "max1d": [76, 130, 149], "amr_modul": [76, 115, 123, 129, 130], "somewhat": [76, 81, 115, 116, 125, 148], "safe": 76, "output_styl": [77, 88, 91, 98, 135, 139, 148, 150, 152], "output_t0": [77, 136, 139, 148, 150, 152], "elif": [77, 150, 152], "output_tim": [77, 98, 139, 148, 150], "1800": 77, "7200": 77, "iout": [77, 152], "timestep": [77, 91, 98, 124, 126, 148, 150, 152, 158], "ntot": [77, 152], "output_step_interv": [77, 148, 150, 152], "total_step": [77, 148, 150, 152], "postprocess": [77, 98], "editor": 77, "valout": [77, 127, 130, 136, 161], "40000000e": 77, "ngrid": 77, "naux": 77, "nghost": 77, "preceed": [77, 167], "grid_numb": 77, "00000000e": 77, "xlow": 77, "ylow": 77, "25000000e": 77, "former": [77, 82, 167], "cut": [77, 149], "b0002": 77, "decompos": [77, 140, 170], "contigu": [77, 97, 106, 142], "output_aux_compon": [77, 148, 150, 152], "axxxx": [77, 97], "output_aux_onlyonc": [77, 148, 150, 152], "reli": [78, 89, 100, 110, 125], "weno": [78, 96, 104], "rk": [78, 104], "cake": 79, "belki": 79, "shoot": [81, 96], "favorit": 81, "hood": [81, 96], "task": 81, "phoni": 82, "plotexampl": 82, "acou": 82, "add_true_solut": 82, "qtrue": 82, "add_titl": 82, "4e": 82, "iplotclaw_": 82, "plotloop": [82, 84], "mid": 82, "stream": 82, "inherit": [82, 94, 104], "belong": [82, 94, 99, 103, 106], "getcwd": 82, "_output2": [82, 84], "plu": [82, 119, 150, 152, 164], "duplic": [82, 122, 136, 139], "wider": 82, "preced": 82, "pinkfig": 82, "acquir": 82, "get_cmap": 82, "fade": 82, "yellow_red_blu": 82, "ffff00": 82, "rgb": 82, "predefin": 82, "showcolor": 82, "call_setplot": 82, "inadvertantli": 82, "resetplot": [82, 84], "spot": 82, "exam": 82, "pd": [82, 84], "attributeerror": 82, "traceback": 82, "new_plotfgur": 82, "mi": 82, "spell": 82, "debugg": 82, "pdb": 82, "ipdb": 82, "plot_topo_fil": [83, 123], "replot": 84, "vi": [84, 91], "recomput": [84, 88, 120, 129], "my_setplot_fil": 84, "xcode": 85, "python2": [85, 132, 137], "brew": 85, "maco": 85, "scipysuperpack": 85, "pypa": 85, "en": 85, "upgrad": 85, "Their": 86, "appreci": 86, "surviv": 86, "alphabet": 86, "programmat": 86, "petclaw": [86, 99, 100, 101, 103, 109, 111, 116], "jed": 86, "brown": [86, 164], "ondrej": 86, "lisandro": 86, "dalcin": 86, "pyweno": [86, 104], "mainten": 86, "interleav": [86, 102], "kristof": 86, "unterweg": 86, "peanoclaw": 86, "chanc": 86, "reprint": 86, "inhabit": 88, "sigma": 88, "omega": 88, "meshgrid": [88, 101, 142, 164], "exp": [88, 98, 108], "cosin": 88, "imped": [88, 102, 108], "problem_data": [88, 102, 103, 106, 108, 141], "cparam": [88, 106], "set_cparam": [88, 106], "sol": 88, "readi": [88, 89, 91, 105], "clawsolver1d": [88, 91, 94, 104, 108, 140], "bc": [88, 95, 101, 108, 150, 152, 161], "pick": [88, 104], "rp": 88, "acoustics_1d": [88, 96, 102, 108], "decid": [88, 104], "my_rp_modul": 88, "my_acoustics_rp": 88, "tvd": [88, 94, 104, 170], "vanleer": [88, 104, 148, 150, 152], "evolve_to_tim": [88, 104], "keep_copi": [88, 91, 98], "behaviour": 88, "count": 88, "count_from_zero": 88, "write_aux_init": [88, 91], "write_aux_alwai": [88, 91, 98], "compute_p": [88, 91], "accept": [88, 98, 104, 148], "stress": [88, 98], "mp": [88, 98, 106], "clawdata2pyclaw": 89, "aid": 89, "therefor": [89, 99, 127, 162], "reutil": 89, "inde": [89, 99], "computation": [89, 104], "intens": 89, "shallow_spher": [89, 116, 141], "heavili": 89, "succesfulli": 89, "initialize_sourc": 89, "src2": [89, 136, 154, 157, 167], "distutil": [89, 137], "dummi": [89, 104, 167], "queri": [89, 94, 109], "namespac": 89, "docstr": [89, 93, 116], "zp": 89, "num_ghost": [89, 94, 97, 101, 102, 104, 106, 140, 148, 150, 152], "dxc": 89, "dyc": 89, "intent": [89, 140], "cf2py": 89, "multidimension": [89, 96], "fortran_src_wrapp": 89, "xlowerg": 89, "ylowerg": 89, "whith": 89, "hoc": 89, "step2": 89, "step2qcor": 89, "qcor": 89, "two_d_classic_sourc": 89, "flux2": 89, "philim": 89, "output_filenam": 89, "input_filenam": 89, "sagemathcloud": 90, "sagemath": 90, "termin": [90, 146, 148, 149], "my_solv": 91, "my_initial_solut": 91, "entireti": 91, "check_valid": 91, "tradit": [91, 97], "run_data": 91, "f_file_nam": [91, 98], "f_path": 91, "compute_f": [91, 98], "densiti": [91, 98, 102, 106, 108, 149, 150, 167], "file_prefix_p": 91, "prepend": 91, "nstepout": [91, 98], "out_tim": 91, "outdir_p": 91, "output_file_prefix": [91, 98], "_pyclaw_io": 91, "output_opt": 91, "runmak": 91, "xdir": 91, "xclawcmd": 91, "savecod": 91, "viewable_attribut": 91, "cygwin": 91, "xclawerr": 91, "xclawout": 91, "dtdx": 92, "act": [92, 164], "num_wav": [92, 102, 140, 148, 150, 152], "07": [92, 102, 161], "minmod": [92, 94, 104, 148, 150, 152], "minmod_limit": 92, "superbe": [92, 148, 150, 152], "superbee_limit": 92, "van": [92, 104, 148, 150, 152], "leer": [92, 104, 148, 150, 152], "mc": [92, 99, 148, 150, 152], "mc_limit": 92, "beam": 92, "warm": 92, "frommm": 92, "albada": 92, "klein": 92, "sharpen": 92, "van_leer_klein_sharpening_limit": 92, "roe": [92, 102, 132, 140], "scheme": [92, 102], "arora": 92, "arora_ro": 92, "theta": 92, "95": [92, 105], "safeti": 92, "theta_limit": 92, "ultrabe": 92, "cfl_superbe": 92, "cfl_superbee_theta": 92, "beta_limit": 92, "hyperbe": 92, "hyperbee_limit": 92, "superpow": 92, "superpower_limit": 92, "cada": 92, "torrilhon": 92, "cada_torrilhon_limit": 92, "cada_torrilhon_limiter_nonlinear": 92, "1st": [92, 104, 148, 150, 152, 167], "upper_bound_limit": 92, "friedemann": 92, "kemm": 92, "kemm_2009": 92, "08": [92, 94, 161], "depdend": 92, "6666666666666666": 92, "epsilon": 92, "caut": 92, "use_petsc": [93, 99], "solver_typ": [93, 104], "shouldn": 93, "htmlplot": 93, "acoustics_1d_homogen": [93, 116], "love": [93, 140], "nearli": 94, "arg": [94, 103], "patch_index": 94, "add_dimens": 94, "get_dim_attribut": 94, "attr": [94, 103], "lower_glob": 94, "num_cells_glob": 94, "upper_glob": 94, "node": [94, 127], "unmap": 94, "set_printopt": 94, "doctest": 94, "roundoff": 94, "c_center": 94, "p_node": 94, "grid1d": 94, "c_centers_with_ghost": 94, "lambda": [94, 164], "xarr": 94, "p_center": [94, 108], "49": [94, 164], "81": [94, 142, 151], "add_gaug": [94, 98], "gauge_coord": 94, "ind": 94, "c_nodes_with_ghost": 94, "mark_nod": 94, "mark_cent": 94, "setup_gauge_fil": 94, "_compute_c_cent": 94, "c_node": 94, "_compute_c_nod": 94, "gauge_dir_nam": 94, "gauge_file_nam": 94, "gauge_fil": 94, "_compute_p_cent": 94, "_compute_p_nod": 94, "on_lower_boundari": 94, "on_upper_boundari": 94, "995": 94, "101": [94, 161], "centers_with_ghost": 94, "ndarrari": 94, "nodes_with_ghost": 94, "geom": [94, 106], "clawsolver2d": [94, 104], "dimensional_split": [94, 123, 148, 150, 152], "strang": [94, 104, 148, 150, 152, 167], "enabl": [94, 97, 98, 105, 109, 125], "unsplit": [94, 148, 150, 152], "transverse_wav": [94, 148, 150, 152], "no_tran": 94, "trans_inc": 94, "trans_cor": 94, "mthlim": [94, 104], "famili": [94, 104, 150, 152], "enumer": [94, 104], "lax": [94, 104, 148, 150, 152, 170], "wendroff": [94, 104, 148, 150, 152, 170], "source_split": [94, 104, 148, 150, 152, 167], "fwave": [94, 102, 104, 140], "step_sourc": [94, 101, 104], "kernel_languag": [94, 104, 109, 116], "callabl": [96, 109], "precompil": 96, "massiv": 96, "biggest": 96, "supercomput": [96, 98, 99], "rung": [96, 104], "kutta": [96, 104], "intuit": 96, "guidelin": 96, "pyflak": 96, "pylint": 96, "coverag": [96, 116], "advection_1d": [96, 102], "burger": [96, 140, 167], "burgers_1d": [96, 102], "euler_exact_1d": [96, 102], "euler_hll_1d": [96, 102], "euler_hllc_1d": [96, 102], "euler_roe_1d": [96, 102], "shallow_exact_1d": [96, 102], "shallow_fwave_1d": [96, 102, 141], "shallow_hll_1d": [96, 102, 141], "shallow_roe_1d": [96, 102, 141], "2nd": [96, 101, 104, 148, 150, 152, 167], "leveque1997": 96, "32": [97, 99, 107, 149], "netcdf3": 97, "netcdf4": [97, 162, 164], "read_": [97, 103], "write_": 97, "write_aux": [97, 103], "thoroughli": 97, "read_aux": [97, 103], "txxxx": 97, "qxxxx": 97, "read_arrai": 97, "num_var": 97, "read_patch_head": 97, "read_t": 97, "nstate": 97, "write_p": [97, 103], "write_arrai": 97, "why": 97, "bxxxx": 97, "h5py": 97, "pytabl": 97, "moin": 97, "whichev": 97, "wrapper": [97, 164], "hdfgroup": 97, "obtain5": 97, "lzf": 97, "szip": 97, "dataset": [97, 162, 164, 166], "deflat": 97, "compression_opt": 97, "filter": [97, 164], "legal": 97, "ec": 97, "nn": 97, "chunk": 97, "guess": 97, "shuffl": 97, "fletcher32": 97, "pupyner": 97, "effort": 97, "unidata": 97, "ucar": 97, "17": [97, 125, 126, 138, 167], "netcdf3_class": 97, "netcdf3_64bit": 97, "netcdf4_class": 97, "clobber": [97, 124], "zlib": 97, "complevel": 97, "fastest": [97, 105], "poorest": 97, "slowest": 97, "checksum": 97, "trigger": 97, "chunksiz": 97, "hdf": 97, "least_significant_digit": 97, "quantiz": 97, "lossi": 97, "significantli": [97, 127], "endian": 97, "big": 97, "nativ": 97, "gain": 97, "ness": 97, "_fillvalu": 97, "silent": 97, "customari": 98, "_outdir": 98, "hdf5": 98, "write_aux_int": 98, "energi": [98, 102], "trace": 98, "p_function": 98, "absolut": [98, 115, 116, 127, 149, 150], "mf": [98, 106], "elementwis": 98, "total_energi": 98, "tidal": [98, 143], "whenc": 98, "compute_gauge_valu": 98, "sent": [98, 106], "logger": [98, 106], "interac": 98, "silenc": 98, "gone": 98, "reject": [98, 104, 148], "problemat": 98, "shaheen": 98, "getlogg": 98, "setlevel": 98, "desktop": 99, "mainli": 99, "mpirun": [99, 105, 116], "ll": [99, 108], "toolkit": [99, 168], "petsc4pi": [99, 105, 106, 116], "mercuri": 99, "anl": 99, "hg": 99, "bitbucket": 99, "buildsystem": 99, "config": 99, "zsh": 99, "architectur": 99, "csh": 99, "tcsh": 99, "setenv": 99, "cc": [99, 102, 108], "gcc": [99, 105], "cxx": 99, "mpich": 99, "phase": [99, 110, 124, 130, 149], "googlecod": 99, "iinstal": 99, "cython": 99, "demo": 99, "petsc_hello_world": 99, "hello": 99, "easy_instal": 99, "serial": [99, 103, 109, 161], "certainli": 99, "importantli": 99, "ng": 99, "lowerg": 99, "addition": [99, 158], "excerpt": 99, "320": 99, "partit": 99, "html_plot": 100, "interactive_plot": [100, 108], "3rd": [101, 104, 141], "user_bc_low": 101, "custom_bc": 101, "dim": [101, 102, 104], "qbc": [101, 104, 106], "xrang": 101, "aux_bc_low": 101, "aux_bc_upp": 101, "auxbc": [101, 104, 106], "damiansra": 101, "empyclaw": 101, "maxwell_1d_homogen": 101, "mail": [101, 107], "worthwhil": 101, "impati": 101, "reaction": 101, "diffus": 101, "psi": [101, 167, 170], "dq_src": [101, 104], "shockbubbl": 101, "rp_sourc": 101, "rp_": 102, "q_l": [102, 140, 141], "q_r": [102, 140, 141], "aux_l": [102, 140], "aux_r": [102, 140], "oft": 102, "he": 102, "miscellan": 102, "amdq": [102, 140], "fluctuat": [102, 104, 170], "apdq": [102, 140], "ith": 102, "leveque_book_2002": 102, "matrix": 102, "acoustics_1d_pi": 102, "zz": [102, 108], "advection_1d_pi": 102, "u_t": [102, 108], "burgers_1d_pi": 102, "efix": [102, 141], "entropi": [102, 141], "euler_1d_pi": 102, "exact": 102, "hll": 102, "w_1": 102, "q_hat": 102, "s_1": [102, 142], "u_l": [102, 141], "c_l": 102, "lambda_roe_1": 102, "lambda_roe_2": 102, "w_2": 102, "s_2": [102, 142], "u_r": [102, 141], "c_r": 102, "heat": 102, "gamma1": 102, "hllc": 102, "q_hat_l": 102, "q_hat_r": 102, "s_m": 102, "w_3": 102, "s_3": 102, "p_r": 102, "p_l": 102, "rho_l": 102, "s_l": 102, "rho_r": 102, "s_r": 102, "e_l": 102, "e_r": 102, "aug_glob": 102, "26": [102, 135, 136, 138], "calucl": 102, "newton": 102, "shallow_1d_pi": [102, 141], "wari": 102, "grav": [102, 141], "dry_toler": 102, "ubar": 102, "h_l": [102, 141], "h_r": [102, 141], "cbar": [102, 164], "a1": 102, "delta_hu": 102, "delta_h": 102, "a2": 102, "karg": 103, "reachabl": 103, "truli": 103, "capa": 103, "is_valid": [103, 106], "ioerror": 103, "unsuccess": 103, "signitur": 103, "set_all_st": 103, "Will": 103, "start_fram": 103, "acoustics_2d": 104, "sharpclawsolver2d": 104, "expens": [104, 115, 120, 125], "galerkin": 104, "instantan": 104, "bubbl": 104, "clawsolv": [104, 140], "sharpclawsolv": 104, "superclass": 104, "t_end": 104, "sharpclawsolver1d": 104, "riemann_solv": 104, "claw_packag": 104, "sharpclawnd": 104, "semi": 104, "discret": 104, "dq": [104, 162], "ought": 104, "molsolv": 104, "lim_typ": 104, "weno_ord": 104, "17th": 104, "time_integr": 104, "ssp33": 104, "strong": [104, 110], "shu": 104, "osher": 104, "ssp104": 104, "4th": 104, "ssplmm32": 104, "multistep": 104, "ssplmm43": 104, "ssprk22": 104, "butcher": 104, "lmm": 104, "char_decomp": 104, "characterist": 104, "transmiss": 104, "tfluct_solv": 104, "tfluct": 104, "default_tfluct": 104, "aux_time_dep": 104, "cfl_desir": [104, 148, 150, 152], "cfl_max": [104, 148, 150, 152], "call_before_step_each_stag": 104, "before_step": 104, "stage": [104, 143, 144, 162, 164], "accept_reject_step": 104, "check_3rd_ord_cond": 104, "step_index": 104, "dtfe": 104, "ssplmm": 104, "posteriori": 104, "violat": [104, 164], "muct": 104, "dqdt": 104, "get_dt_new": 104, "take_one_step": 104, "update_saved_valu": 104, "check_lmm_cond": 104, "0001": 104, "max_step": 104, "500": [104, 149, 152], "get_dt": 104, "succeed": 104, "step_hyperbol": 104, "my_custom_bc": 104, "soon": 104, "bc_arrai": 104, "difficulti": [105, 107, 111], "modern": [105, 118, 127, 140], "gnu": 105, "ibm": 105, "xlf": 105, "wiki": 105, "gfortranbinari": 105, "ce": 105, "enthought": [105, 107], "canopi": 105, "live": 106, "constructor": 106, "get_aux_glob": 106, "get_auxbc_from_aux": 106, "get_q_glob": 106, "get_qbc_from_q": 106, "set_aux_from_auxbc": 106, "fortran_modul": 106, "seem": [106, 111, 130, 147, 154], "fragil": 106, "interdepend": 106, "set_num_ghost": 106, "set_q_from_qbc": 106, "gauge_data": 106, "keep_gaug": 106, "hack": 106, "stencil_width": 106, "da": 106, "stencil": 106, "worth": 106, "temporari": 106, "processor": 106, "fset": 106, "consult": 107, "g77": 107, "undefin": 107, "bash_profil": [107, 146], "academ": 107, "epd": 107, "ordinarili": 107, "kappa": [108, 170], "eqnarrai": 108, "p_t": 108, "u_x": 108, "p_x": 108, "tipe": 108, "haven": [108, 110], "deepli": 108, "acquaint": 108, "framecount": 109, "counter": [109, 164], "get_count": 109, "reset_count": 109, "set_count": 109, "new_frame_num": 109, "verifyerror": 109, "add_parent_doc": 109, "check_diff": [109, 116], "abstol": 109, "reltol": 109, "compile_librari": 109, "source_list": 109, "module_nam": 109, "interface_funct": 109, "local_path": 109, "library_path": 109, "f2py_flag": 109, "ioexcept": 109, "f95": 109, "lgomp": 109, "o3": 109, "funrol": 109, "finlin": 109, "fdefault": 109, "construct_function_handl": 109, "function_nam": 109, "func": [109, 158], "convert_fort_double_to_float": 109, "0d0": 109, "gen_vari": [109, 116], "disable_petsc": 109, "runnabl": 109, "kernel": 109, "against": [109, 116, 124, 160], "test_app": [109, 116], "unrecogn": 109, "read_data_lin": 109, "inputfil": [109, 164], "num_entri": 109, "data_typ": 109, "run_app_from_main": 109, "run_seri": 109, "fun": 109, "decor": 109, "comm_world": 109, "check_valu": [109, 116], "januari": [110, 117, 125, 138], "ceas": 110, "python3stat": 110, "howto": 110, "pyport": 110, "bewar": [111, 164], "__file__": 111, "subpackag": 111, "_subpackag": 111, "forestclaw": [111, 123], "getusersitepackag": 111, "getsitepackag": 111, "bad": [111, 116], "harm": 111, "drawback": 111, "cmdline": 111, "echo": 111, "perturb": [112, 151, 162], "workshop": [113, 130], "ik": 113, "basin": 113, "distant": [113, 115], "parameter": [113, 127, 142, 151, 158, 159], "_surge_modul": 113, "workflow": [113, 153, 158], "concentr": 113, "hurrican": [113, 158], "katrina": 113, "directorti": 113, "orlean": 113, "atcf": [113, 127, 158, 159], "chile2010b": 114, "topotools_exampl": [114, 164], "regrid_interv": [115, 149, 150], "surround": [115, 164], "escap": [115, 150], "regrid_buffer_width": [115, 149, 150], "tradeoff": 115, "clustering_cutoff": [115, 149, 150], "amrnez": 115, "undivid": 115, "q_": [115, 140, 170], "divid": [115, 148], "exceed": [115, 127], "largest": [115, 143], "suppli": [115, 158, 167, 170], "constrain": 115, "forbidden": 115, "amrflag": 115, "doflag": 115, "dontflag": 115, "adjoint_flag": 115, "tolsp": 115, "errest": 115, "anywher": 115, "wave_toler": [115, 151], "perfom": 116, "yml": 116, "_output_old": 116, "_output_new": 116, "xxdiff": 116, "opendiff": 116, "_plots_old": 116, "_plots_new": 116, "discoveri": 116, "supplementari": 116, "prime": 116, "stdout": 116, "spawn": 116, "occasion": [116, 125], "failur": [116, 128, 144], "acoustics_3d_vari": 116, "combinatori": 116, "test_acoust": 116, "comprehens": 116, "test_shallow_spher": 116, "meson": [118, 137], "sphere_sourc": [118, 136, 137, 154], "checkpt_styl": [118, 124, 139, 148, 150], "granular": 118, "clawpack_tan": 118, "imshow_norm": 118, "imshow_alpha": 118, "facet": 118, "mpeg": 118, "movi": 118, "ffmpeg": 118, "mp4_movi": 118, "movie_fign": 118, "mp4": 118, "jsanim": [118, 119, 123, 135], "gif": 118, "movie_name_prefix": 118, "chile2010_": 118, "movie_": 118, "chile2010_fign": 118, "kill": 118, "enddo": [118, 167], "storag": [118, 124, 132], "topo_modul": 118, "ntogo": 118, "di": [118, 119], "cleanup": [118, 126], "ipython_displai": 119, "underflow": 119, "nest": [119, 125, 149, 150], "refactor": [119, 120, 121, 123, 125, 126, 128, 132], "geolib": [119, 123], "dtopo_modul": 119, "movetopo": 119, "cellgridintegr": 119, "topo_upd": 119, "cellgridintegrate2": 119, "dt_max_dtopo": [119, 151], "dt_initi": [119, 148, 150, 151, 152], "juli": [120, 121, 138], "nohup": 120, "recalcul": 120, "unnecessarili": 120, "clamshel": 120, "test_topotool": [120, 164], "octob": [121, 122, 123, 129, 130, 133, 134, 136, 137, 138], "dtdx1d": 121, "dtdy1d": 121, "jsanimation_frametool": 121, "rpn2_vc_advect": 121, "dtdtopo": 122, "refinementdata": 122, "ticklabel": 122, "114": 122, "didn": 122, "glitch": 122, "nbtool": 123, "formerli": 123, "makefile_kml": 123, "extran": 123, "compare_gaug": 123, "topoplotdata": 123, "favor": [123, 127, 137, 149, 164], "riemann_tool": [123, 141], "amrlib": 123, "dumpgaug": 123, "stepgrid_dimsplit": 123, "step2x": 123, "step2i": 123, "flux2_dimsplit": 123, "step3x": 123, "step3i": 123, "step3z": 123, "flux3_dimsplit": 123, "advection_3d_swirl": [123, 161], "advection_2d_inflow": 123, "allocat": 123, "igetsp": 123, "holland_storm_modul": 123, "stommel_storm_modul": 123, "constant_storm_modul": 123, "storm_modul": 123, "friction_modul": 123, "geoclaw_modul": 123, "consolid": 123, "amr_data_show": 124, "datadir": 124, "riemann_interact": 124, "nbviewer": 124, "maojr": 124, "ipynotebook": 124, "blob": [124, 141], "interactive_test": 124, "unstabl": 124, "guard": 124, "crash": [124, 148, 149], "chk00100": 124, "tck00100": 124, "chkaaaaa": 124, "tckaaaaa": 124, "chkbbbbb": 124, "tckbbbbb": 124, "tck": 124, "chk": 124, "flush": 124, "lose": 124, "unneed": 124, "spend": 124, "inconsist": 124, "__future__": 125, "absolute_import": 125, "print_funct": 125, "capabilit": 125, "num_proc": 125, "coupl": [125, 170], "instabl": [125, 132], "transon": 125, "insidi": 125, "enlarg": 125, "june": [126, 127, 128, 129, 138], "woodward": 126, "collela": 126, "blast": 126, "219": 126, "legend_tool": 126, "legend": [126, 142], "riemann_aug_jcp": 126, "geoclaw_riemann_util": 126, "challeng": 126, "timer": 126, "gradient": [126, 170], "xllower": 127, "yllower": 127, "capabili": 127, "landfal": 127, "highli": [127, 144], "code_of_conduct": 127, "conduct": 127, "plot_timing_stat": [127, 129], "226": 127, "cumul": 127, "maxgr": 127, "rnode": 127, "listofgrid": 127, "10000": [127, 164], "resiz": 127, "10k": 127, "bndlist": 127, "amr_2d": [127, 128], "nodal": 127, "owner": 127, "lookup": 127, "rearrang": 127, "303": 127, "capabilti": 127, "hurdat": [127, 158, 159], "jma": [127, 158, 159], "ibtrac": [127, 158], "tcvital": [127, 158, 159], "wind": [127, 151, 158, 159, 164], "holland": [127, 151, 159], "1980": [127, 151, 159], "stub": 127, "establis": 127, "hwrf": [127, 151, 159], "mimic": 127, "test_etopo1": [127, 162], "etopotool": [127, 162], "etopo1": [127, 142, 143, 162, 164, 166], "gave": 127, "incorrect": [127, 128, 144, 158], "308": 127, "287": 127, "hlle": 128, "adjoint_modul": 128, "amr_1d": 128, "adjointsup_modul": 128, "robustli": 128, "maketopo": [128, 162], "typo": 128, "subprocess": 129, "staff": 129, "timing_plot": 129, "mhd": 129, "faster": [129, 130, 132, 164], "clearer": [129, 132, 133], "topo_miss": 129, "bowl": 129, "slosh": 129, "3764278": [130, 138], "among": 130, "bzip2": 130, "unpack": 130, "get_remote_fil": [130, 164], "notebook_html": 130, "nbconvert": 130, "animation_tool": [130, 131], "ride": 130, "skip_patches_outside_xylimit": [130, 132], "ruled_rectangl": 130, "lagrangian_gaug": 130, "million": 130, "set_eta_init": [130, 144], "subsid": [130, 144, 151], "uplift": [130, 144, 151], "septemb": [131, 138], "weren": 131, "verbosity_regrid": [131, 149, 150], "2021": [132, 133, 134, 135, 138], "4503024": [132, 138], "memsiz": [132, 149], "implicitli": [132, 151], "rpt2_geoclaw": [132, 141], "unnecessari": 132, "prepc": 132, "thought": [132, 143], "advertis": 132, "topotyp": [132, 151, 162], "5595424": [133, 138], "rp1_shallow_hl": 133, "geotiff": 133, "decemb": [134, 135, 138], "5781749": [134, 138], "segment": [134, 142], "2022": [135, 136, 138], "7026045": [135, 138], "trucat": 135, "svg": 135, "pcolor_kwarg": 135, "286": 135, "to_jshtml": 135, "8400237": [136, 138], "claw_python": 136, "pytest": 136, "add_attribut": 136, "cmd": 136, "fgmax_fin": 136, "fgmaxdata": 136, "compabl": 136, "xxx": [137, 162], "redon": 137, "fixed_grid_data": 137, "tba": 138, "10076317": 138, "3528429": 138, "3237295": 138, "1405834": 138, "262111": 138, "50982": 138, "tchknnnnn": 139, "chknnnnn": [139, 148, 150, 152], "nnnnn": [139, 148], "containt": 139, "restart_fil": [139, 148, 150, 152], "commenc": 139, "undesir": 139, "fashion": 139, "traffic": [140, 167], "rp1": [140, 170], "maxm": 140, "ql": 140, "qr": 140, "auxl": 140, "auxr": 140, "mwave": 140, "q_i": [140, 170], "x_": [140, 170], "ell": 140, "cal": [140, 167, 170], "p_": [140, 170], "_ptwise": 140, "rp1_ptwise": 140, "rpn2_ptwise": 140, "rpt2_ptwise": 140, "har": 140, "x_i": [140, 167, 170], "jacobian": [140, 170], "use_fwav": [140, 148, 150, 152], "my_riemann_solv": 140, "solver_nam": 140, "sole": 140, "bmatrix": 141, "graviti": [141, 151], "rp1_shallow_roe_with_efix": 141, "shallow_roe_with_efix_1d": 141, "shallow_1d": 141, "dam_break": 141, "passiv": 141, "rp1_shallow_roe_trac": 141, "shallow_roe_tracer_1d": 141, "shallow_trac": 141, "rp1_shallow_bathymetry_fwav": 141, "shallow_bathymetry_fwave_1d": 141, "sill": 141, "rpn2_shallow_roe_with_efix": 141, "rpt2_shallow_roe_with_efix": 141, "shallow_roe_with_efix_2d": 141, "shallow_2d": 141, "radial_dam_break": 141, "rpn2_shallow_bathymetry_fwav": 141, "shallow_bathymetry_fwave_2d": 141, "rpn2_shallow_spher": 141, "rpt2_shallow_spher": 141, "shallow_sphere_2d": 141, "rossby_wav": 141, "costli": 141, "rpn2_geoclaw": 141, "sw_aug_2d": 141, "rpn2_sw_aug": 141, "reval": 141, "riemann_solut": 141, "plot_phas": 141, "inclus": 142, "union": [142, 162], "y_": 142, "scriptstyl": 142, "x_c": 142, "y_c": 142, "ldot": 142, "unequ": 142, "vstack": 142, "31": 142, "zm": 142, "rrzigzag": 142, "rr2": 142, "readlin": 142, "strip": [142, 164], "nrule": 142, "000000000": 142, "admiralti": 142, "inlet": 142, "kitsap": 142, "peninsula": 142, "strait": 142, "juan": 142, "fuca": 142, "ruledrectangle_admiraltyinlet": 142, "400": 142, "851": 142, "529": 142, "036": 142, "578": 142, "577": 142, "187": 142, "623": 142, "191": 142, "684": 142, "221": 142, "755": 142, "rr_admiralti": 142, "rr_name": 142, "compactli": 142, "enforc": 142, "x_center": 142, "y_center": 142, "logical_or": 142, "edgecolor": 142, "dark": 142, "loc": [142, 164], "129": 142, "degener": 142, "vancouv": 142, "shoal": 142, "inundataion": [143, 166], "relief": [143, 166], "msl": [143, 166], "hilo": [143, 166], "feet": [143, 166], "arc": 143, "presum": 143, "vastli": 143, "fall": [143, 151], "mhhw": 143, "astronom": 143, "aht": 143, "worst": 143, "spacial": 144, "variable_eta_init": [144, 151], "nearfield": 144, "steepli": 144, "siesmic": 144, "eta_init": 144, "ever": [147, 151], "ff9999": 147, "claw_pkg": [148, 149, 150, 151, 152], "analog": [148, 149], "capa_index": [148, 150, 152], "dt_variabl": [148, 150, 152], "output_q_compon": [148, 150, 152], "unsur": 148, "lenght": 148, "dt_max": [148, 150, 152], "stiff": 148, "retak": [148, 150, 152], "contamin": 148, "500000": 148, "steps_max": [148, 150, 152], "infinit": 148, "donor": [148, 150, 152], "upwind": 148, "transmit": 148, "transport": [148, 150, 152], "tranpsort": 148, "central": [148, 158, 159], "decomposit": 148, "srcn": [148, 167], "hyperol": 148, "src_split": [148, 150, 152], "thn": 148, "harder": 148, "checkpt_tim": [148, 150], "checkpt_interv": [148, 150], "refinement_ratios_x": [149, 150], "refinement_ratios_t": [149, 150, 151], "variable_dt_refinement_ratio": [149, 151], "xleft": [149, 150], "yleft": [149, 150], "travel": 149, "pt": [149, 150], "forbiddn": 149, "omp": 149, "spent": [149, 161], "1048575": 149, "4194303": 149, "8388607": 149, "dprint": [149, 150], "eprint": [149, 150], "edebug": [149, 150], "gprint": [149, 150], "bisect": [149, 150], "nprint": [149, 150], "pprint": [149, 150], "rprint": [149, 150], "sprint": [149, 150], "tprint": [149, 150], "uprint": [149, 150], "upbnd": [149, 150], "acoustics_2d_radi": [150, 167], "assert": [150, 152], "probdata": [150, 152], "new_userdata": [150, 152], "add_param": [150, 152], "medium": [150, 167], "000000e": 150, "000000": 150, "chk00006": [150, 152], "ntime": 150, "step_interv": 150, "00000e": 150, "900000": 150, "50000": 150, "amr_level_max": 150, "auxtyp": 150, "001000e": 150, "alg": 150, "toggl": 150, "err": 150, "est": 150, "proj": 150, "__name__": [150, 152], "__main__": [150, 152], "argv": [150, 152], "setrun_setgeo": 151, "refinement_data": 151, "speed_toler": 151, "earth_radiu": 151, "6367": 151, "5e3": 151, "friction_forc": 151, "manning_coeffici": 151, "delin": 151, "manning_break": 151, "file1info": 151, "file2info": 151, "dtopotyp": [151, 162], "qinit_typ": [151, 162], "qinitfil": 151, "qinitdata": 151, "coseism": 151, "surge_data": 151, "wind_forc": 151, "drag": 151, "drag_law": 151, "deterimin": [151, 164], "garret": 151, "powel": 151, "pressure_forc": 151, "wind_index": 151, "pressure_index": 151, "display_landfall_tim": 151, "wind_refin": 151, "r_refin": 151, "storm_specification_typ": 151, "chava": 151, "lin": 151, "emmanuel": 151, "storm_fil": [151, 158], "storm_specif": 151, "classic4": 152, "tout": 152, "javascript": 153, "publicli": 153, "develp": 154, "tropic": 154, "polar": 154, "variat": 154, "circumst": 154, "src1d": 157, "src3": [157, 167], "ensembl": 158, "my_storm": 158, "my_geoclaw_storm": 158, "imd": [158, 159], "nodataerror": 158, "nhc": 158, "japanes": 158, "meterolog": 158, "indian": 158, "meteorlog": 158, "datetiem": 158, "time_offset": 158, "eye_loc": 158, "ey": [158, 159], "decimc": 158, "max_wind_spe": 158, "max_wind_radiu": 158, "central_pressur": 158, "storm_radiu": 158, "iso": 158, "wind_spe": 158, "34kt": 158, "50kt": 158, "64kt": 158, "radii": 158, "categori": 158, "categor": 158, "cat_nam": 158, "car_nam": 158, "read_atcf": 158, "read_geoclaw": 158, "human": 158, "readabl": [158, 159], "read_hurdat": 158, "aoml": 158, "hrd": 158, "data_storm": 158, "single_storm": 158, "risen": 158, "read_ibtrac": 158, "sid": 158, "storm_nam": 158, "start_dat": 158, "agency_pref": 158, "wmo": 158, "usa": 158, "tokyo": 158, "newdelhi": 158, "reunion": 158, "bom": 158, "nadi": 158, "wellington": 158, "cma": 158, "hko": 158, "ds824": 158, "td9636": 158, "td9635": 158, "neumann": 158, "mlc": 158, "v4": 158, "unnam": 158, "wmo_": 158, "wmo_ag": 158, "usa_ag": 158, "closest": 158, "read_imd": 158, "read_jma": 158, "jp": 158, "eng": 158, "rsmc": 158, "hp": 158, "eg": 158, "besttrack": 158, "e_format_bst": 158, "read_tcvit": 158, "write_atcf": 158, "write_geoclaw": 158, "max_wind_radius_fil": 158, "storm_radius_fil": 158, "forecast": 158, "redund": 158, "write_hurdat": 158, "write_imd": 158, "write_jma": 158, "write_tcvit": 158, "available_format": 158, "available_model": 158, "fill_rad_w_other_sourc": 158, "storm_targ": 158, "interp_kwarg": 158, "tri": 158, "storm_ibtrac": 158, "path_to_ibtrac": 158, "2018300n26315": 158, "storm_atcf": 158, "path_to_atcf": 158, "fill_mwr": 158, "out_path": 158, "make_multi_structur": 158, "observerd": 159, "parametr": 159, "gride": 159, "dens": 159, "profil": [159, 164], "_storm_modul": 159, "stepgrid": 161, "850": 161, "853": 161, "288e": 161, "214": 161, "552": 161, "373e": 161, "92": 161, "774": 161, "370": 161, "259": 161, "260e": 161, "108": 161, "838": 161, "414": 161, "664": 161, "301e": 161, "440": 161, "392": 161, "473": 161, "014": 161, "801": 161, "508": 161, "447": 161, "413": 161, "402": 161, "483": 161, "472": 161, "470": 161, "85": 161, "uniformli": 162, "nw": 162, "deduc": 162, "input_path": 162, "output_path": 162, "nodatav": 162, "northernmost": 162, "west": 162, "convens": 162, "subsurfac": 162, "gigabyt": 162, "remote_topo_url": [162, 164], "topo1": 162, "navd88": 162, "determine_topo_typ": 164, "create_topo_func": 164, "topo1writ": 164, "topo2writ": 164, "topo3writ": 164, "swaphead": 164, "capab": 164, "mayb": 164, "in_poli": 164, "topo_func": 164, "unstructur": 164, "topo_fil": 164, "filter_region": 164, "generate_2d_topo": 164, "rai": 164, "cast": 164, "versu": 164, "arrang": 164, "x_mask": 164, "maskedarrai": 164, "interp_unstructur": 164, "fill_topo": 164, "delta_limit": 164, "no_data_valu": 164, "buffer_length": 164, "proximity_radiu": 164, "resolution_limit": 164, "gap": 164, "griddata": 164, "delta_x": 164, "delta_i": 164, "make_shoreline_xi": 164, "shoreline_xi": 164, "segement": 164, "npy": 164, "reload": 164, "long_lat": 164, "cb_kwarg": 164, "linestyl": 164, "compens": 164, "shrink": 164, "nc_param": 164, "read_head": 164, "swap": 164, "replace_no_data_valu": 164, "replace_valu": 164, "smooth_data": 164, "ball": 164, "inf": 164, "oscillatori": 164, "header_styl": 164, "7e": 164, "infer": 164, "arcgi": 164, "asc": 164, "millimet": 164, "15e": 164, "7i": 164, "coorind": 164, "specfi": 164, "topgraphi": 164, "__________________o": 164, "fetch_topo_url": 164, "local_fnam": 164, "ask_us": 164, "get_topo": 164, "claw_topo_download": 164, "run_exampl": 164, "topo_fnam": 164, "remote_directori": 164, "zvar": 164, "return_topo": 164, "return_xarrai": 164, "band1": 164, "xarrai": 164, "xarray_d": 164, "etopo_sample_2min": 164, "0f": 164, "western": 164, "outputfil": 164, "outfil": 164, "nxpoint": 164, "nypoint": 164, "topotype1": 164, "99999": 164, "forget": 165, "whichclaw": 165, "gnufcompil": 165, "tarbal": 165, "config_fc": 165, "fcompil": 165, "printenv": 165, "154": 165, "wc": 166, "catalog": 166, "mllw": 166, "gloss": 166, "sonel": 166, "mbc": 167, "5d0": 167, "heterogen": 167, "b4stepn": 167, "advection_2d_swirl": 167, "1drad": 167, "mx1d": 167, "q1d": 167, "aux1d": 167, "reader": 168, "time_files_scanf": 168, "04d": 168, "grid_files_scanf": 168, "silo": 168, "vm": 169, "equiv": 170, "m_w": 170, "sum_": 170, "sum_p": 170, "qquad": 170, "nonconserv": 170, "eqn": 170, "claw_1dnoncon": 170, "tild": 170, "f_": 170, "kappa_i": 170}, "objects": {"": [[0, 0, 1, "", "ClawPlotAxes"], [1, 0, 1, "", "ClawPlotData"], [2, 0, 1, "", "ClawPlotFigure"], [3, 0, 1, "", "ClawPlotItem"], [1, 2, 1, "", "clearfigures"], [1, 2, 1, "", "clearframes"], [1, 2, 1, "", "getaxes"], [1, 2, 1, "", "getfigure"], [3, 2, 1, "", "getframe"], [3, 2, 1, "", "gethandle"], [1, 2, 1, "", "getitem"], [1, 2, 1, "", "iplotclaw"], [2, 2, 1, "", "new_plotaxes"], [1, 2, 1, "", "new_plotfigure"], [0, 2, 1, "", "new_plotitem"], [1, 2, 1, "", "plotframe"], [1, 2, 1, "", "printframes"], [1, 2, 1, "", "showitems"]], "clawpack.geoclaw": [[32, 1, 0, "-", "dtopotools"], [35, 1, 0, "-", "fgmax_tools"], [37, 1, 0, "-", "fgout_tools"], [63, 1, 0, "-", "kmltools"], [164, 1, 0, "-", "topotools"], [51, 1, 0, "-", "util"]], "clawpack.geoclaw.dtopotools": [[32, 0, 1, "", "CSVFault"], [32, 0, 1, "", "DTopography"], [32, 0, 1, "", "DTopography1d"], [32, 0, 1, "", "Fault"], [32, 0, 1, "", "Fault1d"], [32, 3, 1, "", "Mw"], [32, 0, 1, "", "SiftFault"], [32, 0, 1, "", "SubFault"], [32, 0, 1, "", "SubFault1d"], [32, 0, 1, "", "SubdividedPlaneFault"], [32, 0, 1, "", "TensorProductFault"], [32, 0, 1, "", "UCSBFault"], [32, 3, 1, "", "plot_dZ_colors"], [32, 3, 1, "", "plot_dZ_contours"], [32, 3, 1, "", "rise_fraction"], [32, 3, 1, "", "strike_direction"]], "clawpack.geoclaw.dtopotools.CSVFault": [[32, 2, 1, "", "read"]], "clawpack.geoclaw.dtopotools.DTopography": [[32, 2, 1, "", "dZ_at_t"], [32, 2, 1, "", "dZ_max"], [32, 2, 1, "", "plot_dZ_colors"], [32, 2, 1, "", "plot_dZ_contours"], [32, 2, 1, "", "read"], [32, 2, 1, "", "write"]], "clawpack.geoclaw.dtopotools.DTopography1d": [[32, 2, 1, "", "dZ_at_t"], [32, 2, 1, "", "dZ_cellave_at_t"], [32, 2, 1, "", "read"], [32, 2, 1, "", "write"]], "clawpack.geoclaw.dtopotools.Fault": [[32, 2, 1, "", "Mo"], [32, 2, 1, "", "Mw"], [32, 2, 1, "", "containing_rect"], [32, 2, 1, "", "create_dtopo_xy"], [32, 2, 1, "", "create_dtopography"], [32, 2, 1, "", "plot_subfaults"], [32, 2, 1, "", "plot_subfaults_depth"], [32, 2, 1, "", "read"], [32, 2, 1, "", "set_dynamic_slip"], [32, 2, 1, "", "write"]], "clawpack.geoclaw.dtopotools.SiftFault": [[32, 2, 1, "", "set_subfaults"]], "clawpack.geoclaw.dtopotools.SubFault": [[32, 2, 1, "", "Mo"], [32, 2, 1, "", "calculate_geometry"], [32, 2, 1, "", "calculate_geometry_triangles"], [32, 4, 1, "", "centers"], [32, 2, 1, "", "convert_to_standard_units"], [32, 5, 1, "", "coordinate_specification"], [32, 4, 1, "", "corners"], [32, 5, 1, "", "depth"], [32, 5, 1, "", "dip"], [32, 2, 1, "", "dynamic_slip"], [32, 4, 1, "", "gauss_pts"], [32, 5, 1, "", "latitude"], [32, 5, 1, "", "length"], [32, 5, 1, "", "longitude"], [32, 5, 1, "", "mu"], [32, 2, 1, "", "okada"], [32, 5, 1, "", "rake"], [32, 5, 1, "", "rise_shape"], [32, 5, 1, "", "rise_time"], [32, 5, 1, "", "rise_time_starting"], [32, 5, 1, "", "rupture_time"], [32, 5, 1, "", "rupture_type"], [32, 2, 1, "", "set_corners"], [32, 5, 1, "", "slip"], [32, 5, 1, "", "strike"], [32, 5, 1, "", "width"]], "clawpack.geoclaw.dtopotools.SubFault1d": [[32, 5, 1, "", "coordinate_specification"], [32, 5, 1, "", "latitude"], [32, 5, 1, "", "length"], [32, 5, 1, "", "longitude"], [32, 5, 1, "", "rake"], [32, 5, 1, "", "strike"]], "clawpack.geoclaw.dtopotools.SubdividedPlaneFault": [[32, 2, 1, "", "subdivide"]], "clawpack.geoclaw.dtopotools.UCSBFault": [[32, 2, 1, "", "read"]], "clawpack.geoclaw.fgmax_tools": [[35, 0, 1, "", "FGmaxGrid"], [35, 3, 1, "", "adjust_fgmax_1d"]], "clawpack.geoclaw.fgmax_tools.FGmaxGrid": [[35, 2, 1, "", "bounding_box"], [35, 2, 1, "", "interp_dz"], [35, 2, 1, "", "ps4_to_arrays"], [35, 2, 1, "", "read_fgmax_grids_data"], [35, 2, 1, "", "read_output"], [35, 2, 1, "", "write_to_fgmax_data"]], "clawpack.geoclaw.fgout_tools": [[37, 0, 1, "", "FGoutFrame"], [37, 0, 1, "", "FGoutGrid"], [37, 3, 1, "", "get_as_array"], [37, 3, 1, "", "make_fgout_fcn_xy"], [37, 3, 1, "", "make_fgout_fcn_xyt"], [37, 3, 1, "", "print_netcdf_info"], [37, 3, 1, "", "read_netcdf"], [37, 3, 1, "", "read_netcdf_arrays"], [37, 3, 1, "", "write_netcdf"]], "clawpack.geoclaw.fgout_tools.FGoutFrame": [[37, 4, 1, "", "B"], [37, 4, 1, "", "eta"], [37, 4, 1, "", "h"], [37, 4, 1, "", "hss"], [37, 4, 1, "", "hu"], [37, 4, 1, "", "hv"], [37, 4, 1, "", "s"], [37, 4, 1, "", "u"], [37, 4, 1, "", "v"]], "clawpack.geoclaw.fgout_tools.FGoutGrid": [[37, 4, 1, "", "X"], [37, 4, 1, "", "Y"], [37, 4, 1, "", "extent_centers"], [37, 4, 1, "", "extent_edges"], [37, 2, 1, "", "read_fgout_grids_data"], [37, 2, 1, "", "read_frame"], [37, 2, 1, "", "set_plotdata"], [37, 2, 1, "", "write_to_fgout_data"], [37, 4, 1, "", "x"], [37, 4, 1, "", "y"]], "clawpack.geoclaw.kmltools": [[63, 3, 1, "", "box2kml"], [63, 3, 1, "", "deg2dms"], [63, 3, 1, "", "dtopo2kml"], [63, 3, 1, "", "f2s"], [63, 3, 1, "", "fgmax2kml"], [63, 3, 1, "", "fgout2kml"], [63, 3, 1, "", "gauges2kml"], [63, 3, 1, "", "kml_build_colorbar"], [63, 3, 1, "", "kml_cb"], [63, 3, 1, "", "kml_png"], [63, 3, 1, "", "kml_timespan"], [63, 3, 1, "", "line2kml"], [63, 3, 1, "", "make_input_data_kmls"], [63, 3, 1, "", "pcolorcells_for_kml"], [63, 3, 1, "", "png2kml"], [63, 3, 1, "", "poly2kml"], [63, 3, 1, "", "quad2kml"], [63, 3, 1, "", "regions2kml"], [63, 3, 1, "", "topo2kml"], [63, 3, 1, "", "topo2kmz"], [63, 3, 1, "", "transect2kml"]], "clawpack.geoclaw.surge": [[158, 1, 0, "-", "storm"]], "clawpack.geoclaw.surge.storm": [[158, 6, 1, "", "NoDataError"], [158, 0, 1, "", "Storm"], [158, 3, 1, "", "available_formats"], [158, 3, 1, "", "available_models"], [158, 3, 1, "", "fill_rad_w_other_source"], [158, 3, 1, "", "make_multi_structure"]], "clawpack.geoclaw.surge.storm.Storm": [[158, 2, 1, "", "category"], [158, 2, 1, "", "read"], [158, 2, 1, "", "read_atcf"], [158, 2, 1, "", "read_geoclaw"], [158, 2, 1, "", "read_hurdat"], [158, 2, 1, "", "read_ibtracs"], [158, 2, 1, "", "read_imd"], [158, 2, 1, "", "read_jma"], [158, 2, 1, "", "read_tcvitals"], [158, 2, 1, "", "write"], [158, 2, 1, "", "write_atcf"], [158, 2, 1, "", "write_geoclaw"], [158, 2, 1, "", "write_hurdat"], [158, 2, 1, "", "write_imd"], [158, 2, 1, "", "write_jma"], [158, 2, 1, "", "write_tcvitals"]], "clawpack.geoclaw.topotools": [[164, 0, 1, "", "Topography"], [164, 3, 1, "", "create_topo_func"], [164, 3, 1, "", "determine_topo_type"], [164, 3, 1, "", "fetch_topo_url"], [164, 3, 1, "", "get_topo"], [164, 3, 1, "", "read_netcdf"], [164, 3, 1, "", "swapheader"], [164, 3, 1, "", "topo1writer"], [164, 3, 1, "", "topo2writer"], [164, 3, 1, "", "topo3writer"]], "clawpack.geoclaw.topotools.Topography": [[164, 4, 1, "", "X"], [164, 4, 1, "", "Y"], [164, 4, 1, "", "Z"], [164, 2, 1, "", "crop"], [164, 4, 1, "", "delta"], [164, 4, 1, "", "extent"], [164, 2, 1, "", "generate_2d_coordinates"], [164, 2, 1, "", "generate_2d_topo"], [164, 2, 1, "", "in_poly"], [164, 2, 1, "", "interp_unstructured"], [164, 2, 1, "", "make_shoreline_xy"], [164, 2, 1, "", "plot"], [164, 2, 1, "", "read"], [164, 2, 1, "", "read_header"], [164, 2, 1, "", "replace_no_data_values"], [164, 2, 1, "", "replace_values"], [164, 2, 1, "", "set_xyZ"], [164, 2, 1, "", "smooth_data"], [164, 2, 1, "", "write"], [164, 4, 1, "", "x"], [164, 4, 1, "", "y"], [164, 4, 1, "", "z"]], "clawpack.geoclaw.util": [[51, 3, 1, "", "bearing"], [51, 3, 1, "", "dist_latlong2meters"], [51, 3, 1, "", "dist_meters2latlong"], [51, 3, 1, "", "dms2decimal"], [51, 3, 1, "", "fetch_noaa_tide_data"], [51, 3, 1, "", "gctransect"], [51, 3, 1, "", "haversine"], [51, 3, 1, "", "inv_haversine"]], "clawpack.petclaw.geometry": [[94, 0, 1, "", "Domain"], [94, 0, 1, "", "Patch"]], "clawpack.petclaw.geometry.Domain": [[94, 5, 1, "", "dimensional_split"], [94, 5, 1, "", "fwave"], [94, 5, 1, "", "kernel_language"], [94, 5, 1, "", "mthlim"], [94, 5, 1, "", "order"], [94, 5, 1, "", "source_split"], [94, 5, 1, "", "step_source"], [94, 5, 1, "", "transverse_waves"], [94, 5, 1, "", "verbosity"]], "clawpack.petclaw.state": [[106, 0, 1, "", "State"]], "clawpack.petclaw.state.State": [[106, 4, 1, "", "F"], [106, 4, 1, "", "aux"], [106, 4, 1, "", "fset"], [106, 5, 1, "", "gauge_data"], [106, 2, 1, "", "get_aux_global"], [106, 2, 1, "", "get_auxbc_from_aux"], [106, 2, 1, "", "get_q_global"], [106, 2, 1, "", "get_qbc_from_q"], [106, 5, 1, "", "keep_gauges"], [106, 4, 1, "", "mF"], [106, 4, 1, "", "mp"], [106, 4, 1, "", "num_aux"], [106, 4, 1, "", "num_eqn"], [106, 4, 1, "", "p"], [106, 5, 1, "", "problem_data"], [106, 4, 1, "", "q"], [106, 2, 1, "", "set_num_ghost"], [106, 5, 1, "", "t"]], "clawpack.pyclaw.classic.solver": [[104, 0, 1, "", "ClawSolver"]], "clawpack.pyclaw.classic.solver.ClawSolver": [[104, 5, 1, "", "fwave"], [104, 5, 1, "", "kernel_language"], [104, 5, 1, "", "mthlim"], [104, 5, 1, "", "order"], [104, 2, 1, "", "setup"], [104, 5, 1, "", "source_split"], [104, 2, 1, "", "step"], [104, 2, 1, "", "step_hyperbolic"], [104, 5, 1, "", "step_source"], [104, 5, 1, "", "verbosity"]], "clawpack.pyclaw.controller": [[91, 0, 1, "", "Controller"]], "clawpack.pyclaw.controller.Controller": [[91, 5, 1, "", "F_file_name"], [91, 4, 1, "", "F_path"], [91, 2, 1, "", "check_validity"], [91, 5, 1, "", "compute_F"], [91, 5, 1, "", "compute_p"], [91, 5, 1, "", "file_prefix_p"], [91, 5, 1, "", "frames"], [91, 5, 1, "", "keep_copy"], [91, 5, 1, "", "nstepout"], [91, 5, 1, "", "num_output_times"], [91, 5, 1, "", "out_times"], [91, 5, 1, "", "outdir"], [91, 4, 1, "", "outdir_p"], [91, 5, 1, "", "output_file_prefix"], [91, 5, 1, "", "output_format"], [91, 5, 1, "", "output_options"], [91, 5, 1, "", "output_style"], [91, 5, 1, "", "overwrite"], [91, 2, 1, "", "plot"], [91, 5, 1, "", "plotdata"], [91, 2, 1, "", "run"], [91, 5, 1, "", "rundir"], [91, 5, 1, "", "runmake"], [91, 5, 1, "", "savecode"], [91, 5, 1, "", "solver"], [91, 5, 1, "", "tfinal"], [91, 4, 1, "", "verbosity"], [91, 5, 1, "", "viewable_attributes"], [91, 5, 1, "", "write_aux_always"], [91, 5, 1, "", "write_aux_init"], [91, 5, 1, "", "xclawcmd"], [91, 5, 1, "", "xclawerr"], [91, 5, 1, "", "xclawout"], [91, 5, 1, "", "xdir"]], "clawpack.pyclaw.fileio": [[97, 1, 0, "-", "ascii"], [97, 1, 0, "-", "binary"], [97, 1, 0, "-", "hdf5"], [97, 1, 0, "-", "netcdf"]], "clawpack.pyclaw.fileio.ascii": [[97, 3, 1, "", "read"], [97, 3, 1, "", "read_array"], [97, 3, 1, "", "read_patch_header"], [97, 3, 1, "", "read_t"], [97, 3, 1, "", "write"], [97, 3, 1, "", "write_array"]], "clawpack.pyclaw.fileio.binary": [[97, 3, 1, "", "read"]], "clawpack.pyclaw.fileio.hdf5": [[97, 3, 1, "", "read"], [97, 3, 1, "", "write"]], "clawpack.pyclaw.fileio.netcdf": [[97, 3, 1, "", "read"], [97, 3, 1, "", "write"]], "clawpack.pyclaw.geometry": [[94, 0, 1, "", "Dimension"], [94, 0, 1, "", "Domain"], [94, 0, 1, "", "Grid"], [94, 0, 1, "", "Patch"]], "clawpack.pyclaw.geometry.Dimension": [[94, 4, 1, "", "centers"], [94, 2, 1, "", "centers_with_ghost"], [94, 4, 1, "", "delta"], [94, 4, 1, "", "nodes"], [94, 2, 1, "", "nodes_with_ghost"]], "clawpack.pyclaw.geometry.Domain": [[94, 4, 1, "", "grid"], [94, 4, 1, "", "num_dim"], [94, 4, 1, "", "patch"]], "clawpack.pyclaw.geometry.Grid": [[94, 2, 1, "", "add_dimension"], [94, 2, 1, "", "add_gauges"], [94, 2, 1, "", "c_center"], [94, 4, 1, "", "c_centers"], [94, 2, 1, "", "c_centers_with_ghost"], [94, 4, 1, "", "c_nodes"], [94, 2, 1, "", "c_nodes_with_ghost"], [94, 4, 1, "", "dimensions"], [94, 5, 1, "", "gauge_dir_name"], [94, 5, 1, "", "gauge_file_names"], [94, 5, 1, "", "gauge_files"], [94, 5, 1, "", "gauges"], [94, 2, 1, "", "get_dim_attribute"], [94, 4, 1, "", "num_dim"], [94, 2, 1, "", "p_center"], [94, 4, 1, "", "p_centers"], [94, 4, 1, "", "p_nodes"], [94, 2, 1, "", "plot"], [94, 2, 1, "", "setup_gauge_files"]], "clawpack.pyclaw.geometry.Patch": [[94, 2, 1, "", "add_dimension"], [94, 4, 1, "", "delta"], [94, 4, 1, "", "dimensions"], [94, 2, 1, "", "get_dim_attribute"], [94, 5, 1, "", "level"], [94, 4, 1, "", "lower_global"], [94, 4, 1, "", "name"], [94, 4, 1, "", "num_cells_global"], [94, 4, 1, "", "num_dim"], [94, 5, 1, "", "patch_index"], [94, 4, 1, "", "upper_global"]], "clawpack.pyclaw.limiters": [[92, 1, 0, "-", "tvd"]], "clawpack.pyclaw.limiters.tvd": [[92, 3, 1, "", "arora_roe"], [92, 3, 1, "", "beta_limiter"], [92, 3, 1, "", "cada_torrilhon_limiter"], [92, 3, 1, "", "cada_torrilhon_limiter_nonlinear"], [92, 3, 1, "", "cfl_superbee"], [92, 3, 1, "", "cfl_superbee_theta"], [92, 3, 1, "", "hyperbee_limiter"], [92, 3, 1, "", "limit"], [92, 3, 1, "", "mc_limiter"], [92, 3, 1, "", "minmod_limiter"], [92, 3, 1, "", "superbee_limiter"], [92, 3, 1, "", "superpower_limiter"], [92, 3, 1, "", "theta_limiter"], [92, 3, 1, "", "upper_bound_limiter"], [92, 3, 1, "", "van_leer_klein_sharpening_limiter"]], "clawpack.pyclaw.sharpclaw.solver": [[104, 0, 1, "", "SharpClawSolver"]], "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver": [[104, 2, 1, "", "accept_reject_step"], [104, 5, 1, "", "aux_time_dep"], [104, 5, 1, "", "call_before_step_each_stage"], [104, 5, 1, "", "cfl_desired"], [104, 5, 1, "", "cfl_max"], [104, 5, 1, "", "char_decomp"], [104, 2, 1, "", "check_3rd_ord_cond"], [104, 2, 1, "", "dq"], [104, 5, 1, "", "dq_src"], [104, 2, 1, "", "dqdt"], [104, 5, 1, "", "fwave"], [104, 2, 1, "", "get_dt_new"], [104, 5, 1, "", "kernel_language"], [104, 5, 1, "", "lim_type"], [104, 5, 1, "", "num_ghost"], [104, 2, 1, "", "setup"], [104, 2, 1, "", "step"], [104, 5, 1, "", "tfluct"], [104, 5, 1, "", "tfluct_solver"], [104, 5, 1, "", "time_integrator"], [104, 2, 1, "", "update_saved_values"], [104, 5, 1, "", "weno_order"]], "clawpack.pyclaw.solution": [[103, 0, 1, "", "Solution"]], "clawpack.pyclaw.solution.Solution": [[103, 2, 1, "", "is_valid"], [103, 4, 1, "", "patch"], [103, 2, 1, "", "plot"], [103, 2, 1, "", "read"], [103, 2, 1, "", "set_all_states"], [103, 4, 1, "", "start_frame"], [103, 4, 1, "", "state"], [103, 2, 1, "", "write"]], "clawpack.pyclaw.state": [[106, 0, 1, "", "State"]], "clawpack.pyclaw.state.State": [[106, 5, 1, "", "F"], [106, 5, 1, "", "gauge_data"], [106, 2, 1, "", "get_aux_global"], [106, 2, 1, "", "get_auxbc_from_aux"], [106, 2, 1, "", "get_q_global"], [106, 2, 1, "", "get_qbc_from_q"], [106, 2, 1, "", "is_valid"], [106, 5, 1, "", "keep_gauges"], [106, 4, 1, "", "mF"], [106, 4, 1, "", "mp"], [106, 4, 1, "", "num_aux"], [106, 4, 1, "", "num_eqn"], [106, 5, 1, "", "p"], [106, 5, 1, "", "problem_data"], [106, 2, 1, "", "set_aux_from_auxbc"], [106, 2, 1, "", "set_cparam"], [106, 2, 1, "", "set_num_ghost"], [106, 2, 1, "", "set_q_from_qbc"], [106, 5, 1, "", "t"]], "clawpack.pyclaw": [[109, 1, 0, "-", "util"]], "clawpack.pyclaw.util": [[109, 0, 1, "", "FrameCounter"], [109, 6, 1, "", "VerifyError"], [109, 3, 1, "", "add_parent_doc"], [109, 3, 1, "", "check_diff"], [109, 3, 1, "", "compile_library"], [109, 3, 1, "", "construct_function_handle"], [109, 3, 1, "", "convert_fort_double_to_float"], [109, 3, 1, "", "gen_variants"], [109, 3, 1, "", "read_data_line"], [109, 3, 1, "", "run_app_from_main"], [109, 3, 1, "", "run_serialized"], [109, 3, 1, "", "test_app"]], "clawpack.pyclaw.util.FrameCounter": [[109, 2, 1, "", "get_counter"], [109, 2, 1, "", "increment"], [109, 2, 1, "", "reset_counter"], [109, 2, 1, "", "set_counter"]], "clawpack.riemann": [[102, 1, 0, "-", "acoustics_1D_py"], [102, 1, 0, "-", "advection_1D_py"], [102, 1, 0, "-", "burgers_1D_py"], [102, 1, 0, "-", "euler_1D_py"], [102, 1, 0, "-", "shallow_1D_py"]], "clawpack.riemann.acoustics_1D_py": [[102, 3, 1, "", "acoustics_1D"]], "clawpack.riemann.advection_1D_py": [[102, 3, 1, "", "advection_1D"]], "clawpack.riemann.burgers_1D_py": [[102, 3, 1, "", "burgers_1D"]], "clawpack.riemann.euler_1D_py": [[102, 3, 1, "", "euler_exact_1D"], [102, 3, 1, "", "euler_hll_1D"], [102, 3, 1, "", "euler_hllc_1D"], [102, 3, 1, "", "euler_roe_1D"]], "clawpack.riemann.shallow_1D_py": [[102, 3, 1, "", "shallow_exact_1D"], [102, 3, 1, "", "shallow_fwave_1d"], [102, 3, 1, "", "shallow_hll_1D"], [102, 3, 1, "", "shallow_roe_1D"]]}, "objtypes": {"0": "py:class", "1": "py:module", "2": "py:method", "3": "py:function", "4": "py:property", "5": "py:attribute", "6": "py:exception"}, "objnames": {"0": ["py", "class", "Python class"], "1": ["py", "module", "Python module"], "2": ["py", "method", "Python method"], "3": ["py", "function", "Python function"], "4": ["py", "property", "Python property"], "5": ["py", "attribute", "Python attribute"], "6": ["py", "exception", "Python exception"]}, "titleterms": {"clawplotax": 0, "attribut": [0, 1, 2, 3, 29, 34, 55, 82, 142], "gaug": [0, 47, 55, 64, 98, 166], "plot": [0, 3, 13, 24, 27, 34, 36, 47, 50, 53, 55, 64, 66, 71, 80, 81, 82, 83, 84, 93, 99, 100, 116, 147, 153, 165, 168], "method": [0, 1, 2, 3, 142, 170], "clawplotdata": 1, "clawplotfigur": 2, "clawplotitem": [3, 82], "special": [3, 149], "all": [3, 62, 70], "1d": [3, 8, 18], "plot_typ": 3, "1d_plot": 3, "1d_fill_between": 3, "1d_from_2d_data": 3, "2d": [3, 19, 140], "2d_contour": 3, "2d_pcolor": 3, "2d_imshow": 3, "2d_hillshad": 3, "amr": [3, 5, 6, 24, 70, 76, 115, 142, 149, 151], "colorbar": [3, 55], "about": [4, 86], "thi": [4, 58], "softwar": [4, 17], "licens": [4, 65, 86], "author": 4, "cite": [4, 96], "work": [4, 35, 37, 93, 163, 164, 167], "fund": [4, 86], "guid": [5, 30, 58, 59, 113, 114], "adjoint": 5, "flag": [5, 6, 66, 70, 115, 142, 149], "us": [5, 13, 18, 19, 27, 31, 36, 41, 52, 56, 62, 64, 67, 71, 73, 76, 78, 98, 101, 104, 107, 140, 141, 144, 147, 165, 167], "geoclaw": [5, 15, 16, 20, 24, 27, 42, 48, 49, 50, 51, 52, 53, 55, 76, 79, 83, 112, 115, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 142, 145, 151, 156, 157], "adapt": [6, 16, 27, 41], "mesh": [6, 27], "refin": [6, 16, 27, 41, 115, 151], "algorithm": [6, 17, 70, 78, 170], "ghost": 6, "cell": [6, 42, 142, 151], "boundari": [6, 16, 101, 167, 170], "condit": [6, 16, 101, 108, 167, 170], "choos": [6, 70], "initi": [6, 42, 70, 101, 108, 144, 151, 167], "finer": 6, "grid": [6, 16, 34, 35, 36, 37, 49, 57, 64, 76, 94, 151], "For": 6, "more": [6, 39, 43], "detail": [6, 7, 48], "amrclaw": [7, 8, 9, 10, 20, 27, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 149, 150, 167], "descript": [7, 48], "content": [7, 27, 30, 42, 48, 70, 82, 88, 98, 104, 116, 142], "problem": [8, 89, 101, 108, 167], "old": 8, "approach": 8, "deprec": [8, 151], "doxygen": 9, "document": [9, 11, 32, 35, 37, 51, 58, 59, 63, 96, 126, 127, 155, 164], "flowchart": 10, "applic": [11, 12, 17, 27, 28, 66, 74, 99], "convert": [11, 21, 22], "readm": 11, "rst": 11, "html": [11, 84], "code": [11, 18, 19, 27, 30, 42, 50, 61, 62, 79, 116, 165, 167], "clawcode2html": 11, "clawpack": [12, 13, 17, 20, 21, 22, 23, 24, 25, 26, 27, 31, 46, 56, 58, 59, 60, 61, 66, 78, 79, 89, 92, 104, 105, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 141, 152, 169], "repositori": [12, 20, 25, 30, 54, 58, 59, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 140], "jupyt": [12, 31, 40, 153], "notebook": [12, 31, 40, 110, 153], "submodul": 12, "exampl": [12, 19, 27, 28, 34, 36, 38, 39, 40, 42, 45, 47, 50, 55, 62, 70, 71, 74, 80, 93, 96, 99, 142], "includ": [12, 58], "amazon": 13, "web": 13, "servic": 13, "ec2": 13, "ami": 13, "find": [13, 70, 82], "launch": 13, "an": [13, 38, 39, 40, 55, 64, 70, 74, 99], "instanc": 13, "log": [13, 98], "your": [13, 30, 31, 39, 55, 99, 101, 105, 153, 160], "view": 13, "result": [13, 50, 55, 100, 153], "webpag": [13, 58, 153], "directli": [13, 36], "from": [13, 21, 22, 24, 27, 30, 32, 35, 37, 40, 42, 45, 51, 58, 63, 70, 84, 89, 93, 100, 142, 164], "transfer": 13, "file": [13, 31, 33, 34, 36, 42, 55, 57, 58, 59, 61, 67, 71, 82, 84, 116, 139, 142, 151, 162, 167], "stop": [13, 31], "creat": [13, 31, 42, 55, 59, 70, 71, 74, 88], "own": [13, 31, 101], "b4run": 14, "function": [14, 51, 63, 69, 70, 84, 98, 104, 170], "b4step": [15, 167], "default": [15, 112, 144, 145, 156, 157], "routin": [15, 24, 67, 83, 112, 145, 156, 157], "clamshel": 16, "sphere": [16, 154], "user": [16, 26, 78, 167], "defin": [16, 142], "bibliographi": 17, "paper": 17, "describ": 17, "other": [17, 20, 25, 26, 31, 34, 58, 82, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 142, 144], "refer": [17, 27, 56, 96, 110], "boussinesq": [18, 19], "solver": [18, 19, 78, 88, 96, 101, 102, 104, 108, 140, 141, 167], "One": [18, 49, 140, 141, 170], "space": [18, 19, 49, 170], "dimens": [18, 19, 49, 94, 141, 170], "makefil": [18, 19, 43, 66, 67, 101, 139], "setrun": [18, 19, 24, 47, 148, 149, 150, 151, 152], "py": [18, 19, 24, 36, 82, 111, 147, 148, 149, 150, 151, 152], "two": [19, 141], "type": 19, "dispers": 19, "equat": [19, 102, 108, 141], "The": [19, 55, 69, 70, 71, 108], "sgn": 19, "madsen": 19, "sorensen": 19, "m": 19, "prerequisit": [19, 85], "wave": [19, 140, 170], "break": 19, "switch": [19, 71], "swe": 19, "chang": [20, 24, 82, 104, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "master": [20, 30], "sinc": 20, "v5": [20, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "9": [20, 31, 135, 136, 137], "2": [20, 110, 120, 121, 122, 134, 137], "ar": [20, 82, 118, 127, 128, 129, 130, 131, 132, 133, 134, 135], "backward": [20, 118, 127, 128, 129, 130, 131, 132, 133, 134, 135], "compat": [20, 118, 127, 128, 129, 130, 131, 132, 133, 134, 135], "gener": [20, 24, 32, 35, 37, 51, 58, 63, 127, 128, 129, 130, 131, 132, 133, 134, 135, 137, 151, 164], "classic": [20, 27, 38, 39, 104, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 148, 152, 160], "clawutil": [20, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "visclaw": [20, 27, 64, 81, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "riemann": [20, 27, 96, 101, 102, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 140, 141, 167], "pyclaw": [20, 24, 27, 38, 40, 62, 86, 87, 88, 89, 90, 91, 92, 93, 94, 96, 97, 98, 100, 103, 104, 105, 106, 108, 109, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 160], "4": [21, 22, 23, 24, 89, 125, 126, 138], "3": [21, 42, 70, 123, 124], "6": [21, 22, 89, 128, 129], "5": [22, 24, 31, 127], "0": [22, 24, 31, 117, 118, 119, 120, 123, 125, 127, 128, 130, 132, 135], "python": [22, 84, 85, 105, 110, 111, 130, 163], "convers": 22, "tool": [22, 27, 47, 53, 64, 116, 158, 163], "x": [23, 24, 89, 138], "link": 23, "fortran": [24, 27, 33, 39, 42, 43, 44, 61, 85, 107, 116, 165, 167], "packag": [24, 62, 97, 102], "input": [24, 34, 36, 97, 148, 149], "paramet": [24, 47, 82, 84, 108, 148, 149, 151], "compon": [25, 82], "commun": [26, 30, 79], "workshop": [26, 79], "clinic": 26, "tutori": [26, 108, 110], "avail": [26, 45], "stream": 26, "upcom": 26, "recent": [26, 30], "develop": [26, 27, 30, 79], "sprint": [26, 79], "session": 26, "previou": [26, 58], "event": [26, 55], "full": 27, "tabl": [27, 96], "overview": [27, 147], "get": [27, 31, 50, 71], "start": [27, 31, 50, 113, 114], "geophys": 27, "flow": [27, 88], "visual": [27, 55], "migrat": 27, "older": 27, "version": [27, 31, 43, 54, 56, 58, 59, 62, 111], "resourc": 27, "contribut": [28, 30, 141], "current_data": [29, 84], "guidelin": 30, "report": 30, "fix": [30, 34, 36, 76, 151], "bug": 30, "instal": [30, 39, 40, 60, 61, 62, 78, 85, 96, 99, 105, 107, 111, 160, 165], "instruct": [30, 62], "clone": [30, 61], "most": 30, "github": [30, 59], "check": [30, 116], "out": [30, 70], "branch": [30, 58], "each": [30, 167], "updat": [30, 58, 59], "latest": 30, "never": 30, "commit": 30, "ad": [30, 55, 93, 101, 140], "fork": 30, "remot": 30, "modifi": [30, 67, 139], "issu": 30, "pull": 30, "request": 30, "test": [30, 39, 40, 99, 105, 116, 160], "top": 30, "level": [30, 144, 151], "git": [30, 54, 58, 61, 85], "workflow": 30, "catch": 30, "error": [30, 107], "pyflak": 30, "pylint": 30, "coverag": 30, "troubl": [30, 71, 165], "shoot": [30, 71], "tip": [30, 43, 53, 55, 99], "docker": 31, "abov": 31, "contain": 31, "restart": [31, 88, 139], "run": [31, 38, 39, 40, 50, 88, 90, 93, 99, 100, 116, 148, 149, 165], "move": [31, 32, 49], "between": [31, 82], "host": 31, "machin": [31, 169], "some": [31, 82, 151, 166], "command": [31, 40, 71, 84, 93, 165], "imag": [31, 55], "dockerfil": [31, 59], "binder": 31, "dtopotool": 32, "modul": [32, 35, 37, 51, 63, 96, 109, 150, 152, 164], "topographi": [32, 42, 50, 55, 70, 151, 162, 164, 166], "auto": [32, 35, 37, 51, 63, 164], "docstr": [32, 35, 37, 51, 63, 164], "77": 33, "v": 33, "90": 33, "monitor": [34, 151], "fgmax": [34, 35, 70], "specif": [34, 36, 108, 116, 151, 158, 167], "differ": [34, 55, 62, 67, 78, 82], "point": [34, 70], "style": [34, 58, 77], "valu": [34, 88], "choic": [34, 36], "interpol": [34, 36, 72], "procedur": [34, 36], "A": [34, 36, 142], "simpl": [34, 36, 142], "process": [34, 81], "output": [34, 36, 66, 70, 71, 73, 76, 77, 88, 97, 98, 116, 139, 148, 149, 151, 165], "format": [34, 36, 77, 162], "fgmax_tool": 35, "fgout": [36, 37, 64], "setplot": [36, 71, 82, 84, 147], "produc": [36, 84], "read": [36, 42, 142], "arrai": [36, 42, 70, 77, 107], "registr": [36, 57], "fgout_tool": 37, "ipython": [40, 93], "interpret": 40, "line": [40, 84, 93, 116, 165], "specifi": [41, 64, 82, 84, 115, 147, 148, 149, 151, 167], "flagregion": 41, "rule": [41, 142], "rectangl": [41, 142], "forc": [42, 151], "dry": [42, 70, 151], "sampl": [42, 70, 150, 152], "1": [42, 70, 119, 121, 124, 126, 129, 131, 133, 136], "arcsecond": [42, 70], "dem": [42, 70], "force_dry_init": 42, "usag": 42, "intern": 42, "modif": 42, "compil": [44, 66, 107, 155, 165], "fc": [44, 146], "environ": [44, 146], "variabl": [44, 66, 101, 146], "fflag": 44, "lflag": 44, "pre": 44, "processor": 44, "ppflag": 44, "gfortran": [44, 105], "intel": 44, "book": 45, "fvmhp": 45, "youtub": 45, "video": 45, "galleri": [46, 58, 71], "locat": 47, "coordin": [49, 53, 55], "system": [49, 85], "uniform": 49, "map": [49, 55], "topograpi": 49, "data": [49, 55, 77, 147, 151, 159, 162, 164, 165, 166, 167], "dtopo": [49, 163], "set": [50, 71, 82, 84, 101, 143, 144, 146, 165], "up": [50, 101], "new": [50, 58, 74, 93, 116], "util": [51, 63, 109], "cautionari": 52, "hint": [52, 82, 110], "tsunami": [52, 55, 114, 166], "hazard": 52, "model": [52, 75, 113, 114, 166], "water": [53, 102, 141, 154], "depth": 53, "surfac": [53, 144], "elev": [53, 70, 144], "latitud": [53, 55], "longitud": [53, 55], "ax": 53, "keep": 54, "track": [54, 64], "googl": 55, "earth": 55, "basic": [55, 87, 100], "requir": [55, 167], "option": [55, 61, 84, 99, 101], "gdal": 55, "librari": [55, 67], "chile": 55, "2010": [55, 79], "need": 55, "plotdata": 55, "plotfigur": 55, "figur": [55, 82], "plotax": 55, "plotitem": 55, "overlai": 55, "addit": [55, 149, 151], "kml": 55, "kmz": 55, "tile": 55, "faster": 55, "load": 55, "remov": 55, "alias": 55, "artifact": 55, "multipl": 55, "resolut": [55, 170], "publish": 55, "gpu": 56, "netcdf": [57, 73, 77, 97, 162], "tag": 58, "configur": 58, "doc": 58, "releas": [58, 59, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138], "To": 58, "major": 58, "extra": 58, "built": [58, 93], "sphinx": [58, 155], "page": 58, "do": 59, "prepar": 59, "number": 59, "candid": 59, "tar": [59, 61], "final": 59, "pypi": 59, "zenodo": 59, "open": 59, "scienc": 59, "framework": 59, "osf": 59, "app": 59, "next": [60, 61, 62, 105], "step": [60, 61, 62, 105, 167], "pip": [62, 85, 165], "quick": [62, 113, 114], "experi": 62, "directori": [62, 66, 74, 82], "troubleshoot": [62, 107, 165], "kmltool": 63, "lagrangian": 64, "particl": 64, "altern": 64, "duplic": 66, "base": 66, "sourc": [66, 75, 101, 154, 159, 166, 167, 170], "name": [66, 67], "replac": 67, "same": 67, "man": 68, "friction": 68, "term": [68, 101, 154, 167, 170], "mapc2p": 69, "march": 70, "front": 70, "argument": 70, "mask": 70, "topofil": 70, "region": [70, 115, 142, 151], "previous_pts_chosen": 70, "below": 70, "given": 70, "buffer": 70, "zone": 70, "along": 70, "shore": 70, "onli": 70, "write": [70, 101, 116, 142], "indic": [70, 96], "determin": 70, "area": 70, "mhw": 70, "matlab": 71, "search": 71, "path": [71, 111], "plotclaw": 71, "afterfram": 71, "help": 71, "found": 71, "maxfram": 71, "nearshor": 72, "copi": 74, "exist": 74, "earthquak": [75, 166], "fault": 75, "slip": 75, "okada": 75, "rectangular": 75, "subfault": 75, "kinemat": 75, "ruptur": 75, "triangular": 75, "openmp": 76, "sytl": 77, "ascii": [77, 97], "fort": [77, 82], "t0002": 77, "q0002": 77, "raw": 77, "binari": [77, 97], "aux": [77, 88], "which": [78, 111], "should": 78, "i": [78, 98], "interfac": 78, "parallel": [78, 94, 99, 100, 106], "comput": [78, 139], "photo": 79, "2016": 79, "univers": 79, "washington": 79, "2015": 79, "utah": 79, "2014": 79, "hpc3": 79, "kaust": 79, "2013": 79, "claw": [79, 146], "dev": 79, "uw": 79, "2012": 79, "2011": 79, "hack": 79, "post": 81, "fly": 81, "faq": 82, "what": [82, 84, 98, 141], "": [82, 93, 104, 141, 170], "make": [82, 99, 153, 165], "how": [82, 84, 98], "someth": 82, "than": 82, "q": 82, "add": 82, "anoth": 82, "curv": 82, "e": 82, "g": 82, "true": 82, "solut": [82, 88, 103], "titl": 82, "outdir": 82, "item": 82, "provid": 82, "size": 82, "background": 82, "color": 82, "colormap": 82, "pcolor": 82, "contourf": 82, "debug": [82, 149], "latex": 84, "interact": [84, 93], "iplotclaw": 84, "access": 84, "printfram": 84, "oper": 85, "contributor": 86, "understand": 88, "class": [88, 91, 158], "simul": 88, "creation": 88, "control": [88, 91, 108], "deriv": [88, 98], "quantiti": [88, 98], "port": 89, "cloud": 90, "sage": 90, "math": 90, "limit": 92, "tvd": 92, "cfl": 92, "independ": 92, "depend": [92, 105], "geometri": 94, "serial": [94, 106, 116], "object": [94, 147], "domain": [94, 108], "patch": 94, "petclaw": [94, 106], "go": 95, "further": 95, "featur": 96, "fileio": 97, "hdf5": 97, "frame": 98, "when": 98, "save": [98, 153], "written": 98, "where": 98, "petsc": 99, "correctli": 99, "pass": 99, "script": 101, "auxiliari": 101, "acoust": [102, 108], "advect": 102, "burger": 102, "euler": 102, "shallow": [102, 141, 154], "sharpclaw": 104, "custom": [104, 140], "bc": 104, "signatur": 104, "numpi": 105, "matplotlib": 105, "obtain": 105, "nose": 105, "state": 106, "order": 107, "solv": 108, "drop": 110, "support": [110, 130], "7": [110, 130, 131], "whichclaw": 111, "wa": 111, "import": 111, "sy": 111, "easi": 111, "pth": 111, "pythonpath": [111, 146], "qinit": [112, 151, 162], "storm": [113, 151, 158, 159], "surg": [113, 159], "criteria": 115, "flag2refin": 115, "richardson": 115, "extrapol": 115, "implement": 115, "regress": 116, "travi": 116, "continu": 116, "integr": 116, "diff": 116, "chardiff": 116, "comparison": 116, "imagediff": 116, "pixel": 116, "simultan": 116, "doctest": 116, "note": [117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138], "10": 118, "global": 125, "8": [132, 133, 134], "checkpoint": 139, "after": 139, "dimension": 140, "pointwis": 140, "f": [140, 170], "layer": 141, "potenti": 141, "miss": 141, "demonstr": 141, "roe": 141, "hll": 141, "relat": 142, "convex": 142, "polygon": 142, "d": 142, "slu": 142, "bounding_box": 142, "mask_outsid": 142, "instanti": 142, "make_kml": 142, "cover": 142, "select": 142, "continent": 142, "shelf": 142, "sea_level": 143, "eta": 144, "init": 144, "spatial": [144, 167], "vari": [144, 167], "behavior": 144, "adjust": [144, 151], "sea": [144, 151], "seismic": 144, "deform": 144, "case": 144, "setaux": [145, 167], "desir": 147, "time": [148, 149, 151, 161, 167], "print": 149, "geo": 151, "fixedgrid": 151, "maximum": 151, "arriv": 151, "share": 153, "local": 155, "src1d": [156, 167], "src": [157, 167], "statist": 161, "download": 162, "displac": 162, "topo": 163, "topotool": 164, "f2py": 165, "ex": 165, "bathymetri": 166, "dart": 166, "buoi": 166, "tide": 166, "done": 167, "befor": 167, "visit": 168, "virtual": 169, "propag": 170, "godunov": 170, "high": 170, "formul": 170, "capac": 170}, "envversion": {"sphinx.domains.c": 2, "sphinx.domains.changeset": 1, "sphinx.domains.citation": 1, "sphinx.domains.cpp": 8, "sphinx.domains.index": 1, "sphinx.domains.javascript": 2, "sphinx.domains.math": 2, "sphinx.domains.python": 3, "sphinx.domains.rst": 2, "sphinx.domains.std": 2, "sphinx": 57}, "alltitles": {"ClawPlotAxes": [[0, "clawplotaxes"]], "Attributes": [[0, "attributes"], [1, "attributes"], [2, "attributes"], [3, "attributes"]], "Attributes for gauge plots": [[0, "attributes-for-gauge-plots"]], "Methods": [[0, "methods"], [1, "methods"], [2, "methods"], [3, "methods"]], "ClawPlotData": [[1, "clawplotdata"]], "ClawPlotFigure": [[2, "clawplotfigure"]], "ClawPlotItem": [[3, "clawplotitem"]], "Special attributes for all 1d plots,  plot_type = \u20181d\u2026\u2019": [[3, "special-attributes-for-all-1d-plots-plot-type-1d"]], "Special attributes for plot_type = \u20181d_plot\u2019": [[3, "special-attributes-for-plot-type-1d-plot"]], "Special attributes for plot_type = \u20181d_fill_between\u2019": [[3, "special-attributes-for-plot-type-1d-fill-between"]], "Special attributes for plot_type = \u20181d_from_2d_data\u2019": [[3, "special-attributes-for-plot-type-1d-from-2d-data"]], "Special attributes for all 2d plots,  plot_type = \u20182d\u2026\u2019": [[3, "special-attributes-for-all-2d-plots-plot-type-2d"]], "Special attributes for plot_type = \u20182d_contour\u2019": [[3, "special-attributes-for-plot-type-2d-contour"]], "Special attributes for plot_type = \u20182d_pcolor\u2019": [[3, "special-attributes-for-plot-type-2d-pcolor"]], "Special attributes for plot_type = \u20182d_imshow\u2019": [[3, "special-attributes-for-plot-type-2d-imshow"]], "Special attributes for plot_type = \u20182d_hillshade\u2019": [[3, "special-attributes-for-plot-type-2d-hillshade"]], "AMR Attributes": [[3, "amr-attributes"]], "Colorbar attributes": [[3, "colorbar-attributes"]], "About this software": [[4, "about-this-software"]], "License": [[4, "license"], [65, "license"], [86, "license"]], "Authors": [[4, "authors"]], "Citing this work": [[4, "citing-this-work"]], "Funding": [[4, "funding"], [86, "funding"]], "Guiding AMR with adjoint flagging": [[5, "guiding-amr-with-adjoint-flagging"]], "Using adjoint flagging in GeoClaw": [[5, "using-adjoint-flagging-in-geoclaw"]], "Adaptive mesh refinement (AMR) algorithms": [[6, "adaptive-mesh-refinement-amr-algorithms"]], "Ghost cells and boundary conditions for AMR": [[6, "ghost-cells-and-boundary-conditions-for-amr"]], "Choosing and initializing finer grids": [[6, "choosing-and-initializing-finer-grids"]], "Flagging cells for refinement": [[6, "flagging-cells-for-refinement"]], "For more details": [[6, "for-more-details"]], "AMRClaw Description and Detailed Contents": [[7, "amrclaw-description-and-detailed-contents"]], "AMRClaw for 1d problems": [[8, "amrclaw-for-1d-problems"]], "Old approach, deprecated:": [[8, "old-approach-deprecated"]], "Doxygen documentation of AMRClaw": [[9, "doxygen-documentation-of-amrclaw"]], "AMRClaw Flowcharts": [[10, "amrclaw-flowcharts"]], "Application documentation": [[11, "application-documentation"]], "Converting README.rst to README.html": [[11, "converting-readme-rst-to-readme-html"]], "Converting code to html with clawcode2html": [[11, "converting-code-to-html-with-clawcode2html"]], "Clawpack Applications repository": [[12, "clawpack-applications-repository"]], "Jupyter Notebooks": [[12, "jupyter-notebooks"]], "Submodules": [[12, "submodules"]], "Examples included with Clawpack": [[12, "examples-included-with-clawpack"]], "Amazon Web Services EC2 Clawpack AMI": [[13, "amazon-web-services-ec2-clawpack-ami"]], "Finding the Clawpack AMI": [[13, "finding-the-clawpack-ami"]], "Launching an instance": [[13, "launching-an-instance"]], "Logging on to your instance": [[13, "logging-on-to-your-instance"]], "Using Clawpack": [[13, "using-clawpack"]], "Viewing plots of results": [[13, "viewing-plots-of-results"]], "Viewing webpages directly from your instance": [[13, "viewing-webpages-directly-from-your-instance"]], "Transferring files to/from your instance": [[13, "transferring-files-to-from-your-instance"]], "Stopping your instance": [[13, "stopping-your-instance"]], "Creating your own AMI": [[13, "creating-your-own-ami"]], "b4run function": [[14, "b4run-function"]], "b4step default routines": [[15, "b4step-default-routines"]], "b4step routine in GeoClaw": [[15, "b4step-routine-in-geoclaw"]], "Boundary conditions": [[16, "boundary-conditions"], [170, "boundary-conditions"]], "Boundary conditions for adaptive refinement": [[16, "boundary-conditions-for-adaptive-refinement"]], "Boundary conditions for GeoClaw": [[16, "boundary-conditions-for-geoclaw"]], "Boundary conditions for clamshell grids on the sphere": [[16, "boundary-conditions-for-clamshell-grids-on-the-sphere"]], "User-defined boundary conditions": [[16, "user-defined-boundary-conditions"]], "Bibliography": [[17, "bibliography"]], "Papers describing the Clawpack software and algorithms": [[17, "papers-describing-the-clawpack-software-and-algorithms"]], "Papers describing applications": [[17, "papers-describing-applications"]], "Other references": [[17, "other-references"]], "Boussinesq solvers in One Space Dimension": [[18, "boussinesq-solvers-in-one-space-dimension"]], "Using the 1d Boussinesq code": [[18, "using-the-1d-boussinesq-code"]], "Makefile": [[18, "makefile"], [19, "makefile"]], "setrun.py": [[18, "setrun-py"], [19, "setrun-py"]], "Boussinesq solvers in Two Space Dimensions": [[19, "boussinesq-solvers-in-two-space-dimensions"]], "Boussinesq-type dispersive equations": [[19, "boussinesq-type-dispersive-equations"]], "The SGN equations": [[19, "the-sgn-equations"]], "The Madsen-Sorensen (MS) equations": [[19, "the-madsen-sorensen-ms-equations"]], "Using the 2d Boussinesq code": [[19, "using-the-2d-boussinesq-code"]], "Prerequisites for the 2d Boussinesq code": [[19, "prerequisites-for-the-2d-boussinesq-code"]], "Wave breaking and switching to SWE": [[19, "wave-breaking-and-switching-to-swe"]], "Examples": [[19, "examples"], [42, "examples"], [47, "examples"], [70, "examples"], [96, "examples"], [142, "examples"]], "Changes to master since v5.9.2": [[20, "changes-to-master-since-v5-9-2"]], "Changes that are not backward compatible": [[20, "changes-that-are-not-backward-compatible"], [118, "changes-that-are-not-backward-compatible"], [127, "changes-that-are-not-backward-compatible"], [128, "changes-that-are-not-backward-compatible"], [129, "changes-that-are-not-backward-compatible"], [130, "changes-that-are-not-backward-compatible"], [131, "changes-that-are-not-backward-compatible"], [132, "changes-that-are-not-backward-compatible"], [133, "changes-that-are-not-backward-compatible"], [134, "changes-that-are-not-backward-compatible"], [135, "changes-that-are-not-backward-compatible"]], "General changes": [[20, "general-changes"], [127, "general-changes"], [128, "general-changes"], [129, "general-changes"], [130, "general-changes"], [131, "general-changes"], [132, "general-changes"], [133, "general-changes"], [134, "general-changes"], [135, "general-changes"], [137, "general-changes"]], "Changes to classic": [[20, "changes-to-classic"], [118, "changes-to-classic"], [119, "changes-to-classic"], [120, "changes-to-classic"], [121, "changes-to-classic"], [122, "changes-to-classic"], [123, "changes-to-classic"], [124, "changes-to-classic"], [125, "changes-to-classic"], [126, "changes-to-classic"], [127, "changes-to-classic"], [128, "changes-to-classic"], [129, "changes-to-classic"], [130, "changes-to-classic"], [131, "changes-to-classic"], [132, "changes-to-classic"], [133, "changes-to-classic"], [134, "changes-to-classic"], [135, "changes-to-classic"], [136, "changes-to-classic"], [137, "changes-to-classic"]], "Changes to clawutil": [[20, "changes-to-clawutil"], [118, "changes-to-clawutil"], [119, "changes-to-clawutil"], [120, "changes-to-clawutil"], [121, "changes-to-clawutil"], [122, "changes-to-clawutil"], [123, "changes-to-clawutil"], [124, "changes-to-clawutil"], [125, "changes-to-clawutil"], [126, "changes-to-clawutil"], [127, "changes-to-clawutil"], [128, "changes-to-clawutil"], [129, "changes-to-clawutil"], [130, "changes-to-clawutil"], [131, "changes-to-clawutil"], [132, "changes-to-clawutil"], [133, "changes-to-clawutil"], [134, "changes-to-clawutil"], [135, "changes-to-clawutil"], [136, "changes-to-clawutil"], [137, "changes-to-clawutil"]], "Changes to visclaw": [[20, "changes-to-visclaw"], [118, "changes-to-visclaw"], [119, "changes-to-visclaw"], [120, "changes-to-visclaw"], [121, "changes-to-visclaw"], [122, "changes-to-visclaw"], [123, "changes-to-visclaw"], [124, "changes-to-visclaw"], [125, "changes-to-visclaw"], [126, "changes-to-visclaw"], [127, "changes-to-visclaw"], [128, "changes-to-visclaw"], [129, "changes-to-visclaw"], [130, "changes-to-visclaw"], [131, "changes-to-visclaw"], [132, "changes-to-visclaw"], [133, "changes-to-visclaw"], [134, "changes-to-visclaw"], [135, "changes-to-visclaw"], [136, "changes-to-visclaw"], [137, "changes-to-visclaw"]], "Changes to riemann": [[20, "changes-to-riemann"], [118, "changes-to-riemann"], [119, "changes-to-riemann"], [120, "changes-to-riemann"], [121, "changes-to-riemann"], [122, "changes-to-riemann"], [123, "changes-to-riemann"], [124, "changes-to-riemann"], [125, "changes-to-riemann"], [126, "changes-to-riemann"], [127, "changes-to-riemann"], [128, "changes-to-riemann"], [129, "changes-to-riemann"], [130, "changes-to-riemann"], [131, "changes-to-riemann"], [132, "changes-to-riemann"], [133, "changes-to-riemann"], [134, "changes-to-riemann"], [135, "changes-to-riemann"], [136, "changes-to-riemann"], [137, "changes-to-riemann"]], "Changes to amrclaw": [[20, "changes-to-amrclaw"], [118, "changes-to-amrclaw"], [119, "changes-to-amrclaw"], [120, "changes-to-amrclaw"], [121, "changes-to-amrclaw"], [122, "changes-to-amrclaw"], [123, "changes-to-amrclaw"], [124, "changes-to-amrclaw"], [125, "changes-to-amrclaw"], [126, "changes-to-amrclaw"], [127, "changes-to-amrclaw"], [128, "changes-to-amrclaw"], [129, "changes-to-amrclaw"], [130, "changes-to-amrclaw"], [131, "changes-to-amrclaw"], [132, "changes-to-amrclaw"], [133, "changes-to-amrclaw"], [134, "changes-to-amrclaw"], [135, "changes-to-amrclaw"], [136, "changes-to-amrclaw"], [137, "changes-to-amrclaw"]], "Changes to geoclaw": [[20, "changes-to-geoclaw"], [118, "changes-to-geoclaw"], [119, "changes-to-geoclaw"], [120, "changes-to-geoclaw"], [121, "changes-to-geoclaw"], [122, "changes-to-geoclaw"], [123, "changes-to-geoclaw"], [124, "changes-to-geoclaw"], [125, "changes-to-geoclaw"], [126, "changes-to-geoclaw"], [127, "changes-to-geoclaw"], [128, "changes-to-geoclaw"], [129, "changes-to-geoclaw"], [130, "changes-to-geoclaw"], [131, "changes-to-geoclaw"], [132, "changes-to-geoclaw"], [133, "changes-to-geoclaw"], [134, "changes-to-geoclaw"], [135, "changes-to-geoclaw"], [136, "changes-to-geoclaw"], [137, "changes-to-geoclaw"]], "Changes to PyClaw": [[20, "changes-to-pyclaw"], [117, "changes-to-pyclaw"], [118, "changes-to-pyclaw"], [119, "changes-to-pyclaw"], [120, "changes-to-pyclaw"], [121, "changes-to-pyclaw"], [122, "changes-to-pyclaw"], [123, "changes-to-pyclaw"], [124, "changes-to-pyclaw"], [125, "changes-to-pyclaw"], [126, "changes-to-pyclaw"], [127, "changes-to-pyclaw"], [128, "changes-to-pyclaw"], [129, "changes-to-pyclaw"], [130, "changes-to-pyclaw"], [131, "changes-to-pyclaw"], [132, "changes-to-pyclaw"], [133, "changes-to-pyclaw"], [134, "changes-to-pyclaw"], [135, "changes-to-pyclaw"], [136, "changes-to-pyclaw"], [137, "changes-to-pyclaw"]], "Other Clawpack Repositories": [[20, "other-clawpack-repositories"], [118, "other-clawpack-repositories"], [126, "other-clawpack-repositories"], [127, "other-clawpack-repositories"], [128, "other-clawpack-repositories"], [129, "other-clawpack-repositories"], [130, "other-clawpack-repositories"], [131, "other-clawpack-repositories"], [132, "other-clawpack-repositories"], [133, "other-clawpack-repositories"], [134, "other-clawpack-repositories"], [135, "other-clawpack-repositories"], [136, "other-clawpack-repositories"], [137, "other-clawpack-repositories"]], "Converting from Clawpack 4.3 to 4.6": [[21, "converting-from-clawpack-4-3-to-4-6"]], "Converting from Clawpack 4.6 to 5.0": [[22, "converting-from-clawpack-4-6-to-5-0"]], "Python conversion tool": [[22, "python-conversion-tool"]], "Clawpack 4.x links": [[23, "clawpack-4-x-links"]], "Changes in Clawpack 5.0": [[24, "changes-in-clawpack-5-0"]], "PyClaw in 5.0": [[24, "pyclaw-in-5-0"]], "Fortran package changes": [[24, "fortran-package-changes"]], "Changes to input parameters in setrun.py from 4.x to 5.0": [[24, "changes-to-input-parameters-in-setrun-py-from-4-x-to-5-0"]], "Changes to general parameters": [[24, "changes-to-general-parameters"]], "Changes to AMR parameters": [[24, "changes-to-amr-parameters"]], "Changes to GeoClaw parameters": [[24, "changes-to-geoclaw-parameters"]], "Changes to plotting routines": [[24, "changes-to-plotting-routines"]], "Clawpack components": [[25, "clawpack-components"]], "Other repositories": [[25, "other-repositories"]], "Clawpack Community": [[26, "clawpack-community"]], "User Workshops, Clinics, and Tutorials": [[26, "user-workshops-clinics-and-tutorials"]], "Available for streaming": [[26, "available-for-streaming"]], "Upcoming": [[26, "upcoming"], [26, "id1"]], "Recent": [[26, "recent"]], "Developer Workshops and Sprint Sessions": [[26, "developer-workshops-and-sprint-sessions"]], "Previous": [[26, "previous"]], "Other Clawpack events": [[26, "other-clawpack-events"]], "Contents": [[27, "id1"], [30, "contents"], [42, "contents"], [70, "contents"], [82, "contents"], [88, "contents"], [98, "contents"], [104, "contents"], [116, "contents"], [142, "contents"]], "Full Table of Contents": [[27, "full-table-of-contents"]], "Overview and Getting Started": [[27, "overview-and-getting-started"]], "Examples and Applications": [[27, "examples-and-applications"]], "Classic, AMRClaw, and GeoClaw": [[27, "classic-amrclaw-and-geoclaw"]], "Using the Fortran codes": [[27, "using-the-fortran-codes"]], "AMRClaw: adaptive mesh refinement": [[27, "amrclaw-adaptive-mesh-refinement"]], "GeoClaw: geophysical flows": [[27, "geoclaw-geophysical-flows"]], "PyClaw": [[27, "pyclaw"], [38, "pyclaw"], [96, "pyclaw"], [116, "pyclaw"], [160, "pyclaw"]], "Riemann": [[27, "riemann"]], "VisClaw: Plotting and Visualization Tools": [[27, "visclaw-plotting-and-visualization-tools"]], "Migrating applications from older versions of Clawpack": [[27, "migrating-applications-from-older-versions-of-clawpack"]], "Developers\u2019 resources": [[27, "developers-resources"]], "References": [[27, "references"], [56, "references"]], "Contributing examples and applications": [[28, "contributing-examples-and-applications"]], "current_data": [[29, "current-data"]], "Attributes of current_data:": [[29, "attributes-of-current-data"]], "Developers\u2019 Guide": [[30, "developers-guide"]], "Guidelines for contributing": [[30, "guidelines-for-contributing"]], "Reporting and fixing bugs": [[30, "reporting-and-fixing-bugs"]], "Developer communication": [[30, "developer-communication"]], "Installation instructions for developers": [[30, "installation-instructions-for-developers"]], "Cloning the most recent code from Github": [[30, "cloning-the-most-recent-code-from-github"]], "Checking out the master branch on each repository": [[30, "checking-out-the-master-branch-on-each-repository"]], "Updating to the latest master branch": [[30, "updating-to-the-latest-master-branch"]], "Never commit to master": [[30, "never-commit-to-master"]], "Adding your fork as a remote": [[30, "adding-your-fork-as-a-remote"]], "Modifying code": [[30, "modifying-code"]], "Issuing a pull request": [[30, "issuing-a-pull-request"]], "Testing a pull request": [[30, "testing-a-pull-request"]], "Top-level pull requests": [[30, "top-level-pull-requests"]], "Git workflow": [[30, "git-workflow"]], "Catching errors with Pyflakes and Pylint": [[30, "catching-errors-with-pyflakes-and-pylint"]], "Checking test coverage": [[30, "checking-test-coverage"]], "Trouble-Shooting Tips": [[30, "trouble-shooting-tips"]], "Docker for Clawpack": [[31, "docker-for-clawpack"]], "Using Version 5.9.0 or above": [[31, "using-version-5-9-0-or-above"]], "Getting started": [[31, "getting-started"]], "Stopping a container": [[31, "stopping-a-container"]], "Restarting a container": [[31, "restarting-a-container"]], "Running Jupyter notebooks": [[31, "running-jupyter-notebooks"]], "Moving files between the docker container and the host machine": [[31, "moving-files-between-the-docker-container-and-the-host-machine"]], "Some other useful docker commands": [[31, "some-other-useful-docker-commands"]], "Creating your own docker image": [[31, "creating-your-own-docker-image"]], "Dockerfiles for binder": [[31, "dockerfiles-for-binder"]], "dtopotools module for moving topography": [[32, "dtopotools-module-for-moving-topography"]], "Documentation auto-generated from the module docstrings": [[32, "module-clawpack.geoclaw.dtopotools"], [35, "module-clawpack.geoclaw.fgmax_tools"], [37, "module-clawpack.geoclaw.fgout_tools"], [51, "module-clawpack.geoclaw.util"], [63, "module-clawpack.geoclaw.kmltools"], [164, "module-clawpack.geoclaw.topotools"]], "Fortran 77 vs. Fortran 90 files": [[33, "fortran-77-vs-fortran-90-files"]], "Fixed grid monitoring (fgmax)": [[34, "fixed-grid-monitoring-fgmax"]], "Input file specification": [[34, "input-file-specification"], [36, "input-file-specification"]], "Different point styles": [[34, "different-point-styles"]], "Other attributes": [[34, "other-attributes"]], "Values to monitor": [[34, "values-to-monitor"]], "Choice of interpolation procedure": [[34, "choice-of-interpolation-procedure"], [36, "choice-of-interpolation-procedure"]], "A simple example": [[34, "a-simple-example"], [36, "a-simple-example"]], "Processing and plotting fgmax output": [[34, "processing-and-plotting-fgmax-output"]], "Format of the output files": [[34, "format-of-the-output-files"]], "fgmax examples": [[34, "fgmax-examples"]], "fgmax_tools module for working with fgmax grids": [[35, "fgmax-tools-module-for-working-with-fgmax-grids"]], "Fixed grid output (fgout)": [[36, "fixed-grid-output-fgout"]], "Format of fgout output": [[36, "format-of-fgout-output"]], "Using setplot.py to produce plots": [[36, "using-setplot-py-to-produce-plots"]], "Reading and plotting fgout arrays directly": [[36, "reading-and-plotting-fgout-arrays-directly"]], "fgout grid registration": [[36, "fgout-grid-registration"]], "fgout examples": [[36, "fgout-examples"]], "fgout_tools module for working with fgout grids": [[37, "fgout-tools-module-for-working-with-fgout-grids"]], "Running an example": [[38, "running-an-example"], [39, "running-an-example"], [40, "running-an-example"]], "Classic": [[38, "classic"], [39, "classic"], [160, "classic"]], "Testing your Fortran installation and running an example": [[39, "testing-your-fortran-installation-and-running-an-example"]], "More examples": [[39, "more-examples"]], "Testing a PyClaw installation and running an example": [[40, "testing-a-pyclaw-installation-and-running-an-example"]], "From the Jupyter notebook": [[40, "from-the-jupyter-notebook"]], "From the IPython interpreter": [[40, "from-the-ipython-interpreter"]], "From the command line": [[40, "from-the-command-line"], [93, "from-the-command-line"]], "Specifying flagregions for adaptive refinement": [[41, "specifying-flagregions-for-adaptive-refinement"]], "Using ruled rectangles as flagregions": [[41, "using-ruled-rectangles-as-flagregions"]], "Force Cells to be Dry Initially": [[42, "force-cells-to-be-dry-initially"]], "Sample topography from a 1/3 arcsecond DEM": [[42, "sample-topography-from-a-1-3-arcsecond-dem"], [70, "sample-topography-from-a-1-3-arcsecond-dem"]], "Creating the force_dry_init array": [[42, "creating-the-force-dry-init-array"]], "Create file to read into GeoClaw": [[42, "create-file-to-read-into-geoclaw"]], "Usage in GeoClaw Fortran code": [[42, "usage-in-geoclaw-fortran-code"]], "Internal GeoClaw modifications": [[42, "internal-geoclaw-modifications"]], "Fortran version": [[43, "fortran-version"]], "Makefiles": [[43, "makefiles"]], "More tips": [[43, "more-tips"]], "Fortran Compilers": [[44, "fortran-compilers"]], "FC environment variable": [[44, "fc-environment-variable"]], "FFLAGS environment variable": [[44, "fflags-environment-variable"]], "LFLAGS environment variable": [[44, "lflags-environment-variable"]], "Pre-Processor and the PPFLAGS environment variable": [[44, "pre-processor-and-the-ppflags-environment-variable"]], "gfortran compiler": [[44, "gfortran-compiler"]], "Intel fortran compiler": [[44, "intel-fortran-compiler"]], "Examples from the book FVMHP": [[45, "examples-from-the-book-fvmhp"]], "Available examples": [[45, "available-examples"]], "YouTube Videos": [[45, "youtube-videos"]], "Clawpack Gallery": [[46, "clawpack-gallery"]], "Gauges": [[47, "gauges"]], "Gauge parameters in setrun": [[47, "gauge-parameters-in-setrun"]], "Plotting tools": [[47, "plotting-tools"]], "Plotting gauge locations": [[47, "plotting-gauge-locations"]], "GeoClaw Description and Detailed Contents": [[48, "geoclaw-description-and-detailed-contents"]], "GeoClaw in One Space Dimension": [[49, "geoclaw-in-one-space-dimension"]], "Coordinate systems": [[49, "coordinate-systems"]], "Uniform and mapped grids": [[49, "uniform-and-mapped-grids"]], "Topograpy data": [[49, "topograpy-data"]], "Moving topograpy (dtopo) data": [[49, "moving-topograpy-dtopo-data"]], "Getting started with GeoClaw": [[50, "getting-started-with-geoclaw"]], "Running a GeoClaw code": [[50, "running-a-geoclaw-code"]], "Topography": [[50, "topography"]], "Plotting GeoClaw results": [[50, "plotting-geoclaw-results"]], "Setting up a new example": [[50, "setting-up-a-new-example"]], "geoclaw.util module of utility functions": [[51, "geoclaw-util-module-of-utility-functions"]], "Cautionary Hints on using GeoClaw": [[52, "cautionary-hints-on-using-geoclaw"]], "Tsunami hazard modeling": [[52, "tsunami-hazard-modeling"]], "GeoClaw plotting tools": [[53, "geoclaw-plotting-tools"]], "Plotting water depth or surface elevation": [[53, "plotting-water-depth-or-surface-elevation"]], "Tips on latitude-longitude coordinate axes": [[53, "tips-on-latitude-longitude-coordinate-axes"]], "Keeping track of repository versions with Git": [[54, "keeping-track-of-repository-versions-with-git"]], "Visualizing GeoClaw results in Google Earth": [[55, "visualizing-geoclaw-results-in-google-earth"]], "Basic requirements": [[55, "basic-requirements"]], "Optional GDAL library": [[55, "optional-gdal-library"]], "An example : The Chile 2010 tsunami event": [[55, "an-example-the-chile-2010-tsunami-event"]], "Plotting attributes needed for Google Earth": [[55, "plotting-attributes-needed-for-google-earth"]], "plotdata attributes": [[55, "plotdata-attributes"]], "plotfigure attributes": [[55, "plotfigure-attributes"]], "Creating the figures": [[55, "creating-the-figures"]], "plotaxes attributes": [[55, "plotaxes-attributes"]], "plotitem attributes": [[55, "plotitem-attributes"]], "Adding a colorbar overlay": [[55, "adding-a-colorbar-overlay"]], "Gauge plots": [[55, "gauge-plots"]], "Additional plotdata attributes": [[55, "additional-plotdata-attributes"]], "Plotting tips": [[55, "plotting-tips"]], "KML and KMZ files": [[55, "kml-and-kmz-files"]], "Tiling images for faster loading": [[55, "tiling-images-for-faster-loading"]], "Removing aliasing artifacts": [[55, "removing-aliasing-artifacts"]], "Creating multiple figures at different resolutions": [[55, "creating-multiple-figures-at-different-resolutions"]], "Mapping topography data to latitude/longitude coordinates": [[55, "mapping-topography-data-to-latitude-longitude-coordinates"]], "Publishing your results": [[55, "id1"]], "Using the GPU version of Clawpack": [[56, "using-the-gpu-version-of-clawpack"]], "Grid registration": [[57, "grid-registration"]], "NetCDF files": [[57, "netcdf-files"]], "Guide for updating this documentation": [[58, "guide-for-updating-this-documentation"]], "Git branches and tags": [[58, "git-branches-and-tags"]], "Configuration and style files": [[58, "configuration-and-style-files"]], "Updating the docs for a new release": [[58, "updating-the-docs-for-a-new-release"]], "To generate docs including previous versions": [[58, "to-generate-docs-including-previous-versions"]], "Updating for a new major version": [[58, "updating-for-a-new-major-version"]], "Updating the gallery": [[58, "updating-the-gallery"]], "Updating the webpages": [[58, "updating-the-webpages"]], "Extra files for webpages not built by Sphinx": [[58, "extra-files-for-webpages-not-built-by-sphinx"]], "Pages from other clawpack repositories": [[58, "pages-from-other-clawpack-repositories"]], "Guide for doing a Clawpack release": [[59, "guide-for-doing-a-clawpack-release"]], "Preparation": [[59, "preparation"]], "Version numbers": [[59, "version-numbers"]], "Release candidates": [[59, "release-candidates"]], "Create a tar file and a Github release": [[59, "create-a-tar-file-and-a-github-release"]], "Final release": [[59, "final-release"]], "Pypi": [[59, "pypi"]], "Zenodo": [[59, "zenodo"]], "Open Science Framework (OSF)": [[59, "open-science-framework-osf"]], "Updating the documentation": [[59, "updating-the-documentation"]], "Updating the apps repository": [[59, "updating-the-apps-repository"]], "Updating the Dockerfile": [[59, "updating-the-dockerfile"]], "Installing Clawpack": [[60, "installing-clawpack"]], "Next steps:": [[60, "next-steps"], [61, "next-steps"], [62, "next-steps"]], "Options for installing Clawpack Fortran codes": [[61, "options-for-installing-clawpack-fortran-codes"]], "tar file": [[61, "tar-file"]], "git clone": [[61, "git-clone"]], "pip install instructions": [[62, "pip-install-instructions"]], "Quick Installation of PyClaw with pip": [[62, "quick-installation-of-pyclaw-with-pip"]], "Quick Installation of all packages with pip": [[62, "quick-installation-of-all-packages-with-pip"]], "Using pip to install a different version": [[62, "using-pip-to-install-a-different-version"]], "Experimenting with code in the examples directories": [[62, "experimenting-with-code-in-the-examples-directories"]], "Troubleshooting pip install": [[62, "troubleshooting-pip-install"]], "kmltools module of utility functions": [[63, "kmltools-module-of-utility-functions"]], "Lagrangian gauges for particle tracking": [[64, "lagrangian-gauges-for-particle-tracking"]], "Specifying Lagrangian Gauges": [[64, "specifying-lagrangian-gauges"]], "Visclaw tools for plotting": [[64, "visclaw-tools-for-plotting"]], "An alternative using fgout grids": [[64, "an-alternative-using-fgout-grids"]], "Clawpack Makefiles": [[66, "clawpack-makefiles"]], "Applications directory Makefiles": [[66, "applications-directory-makefiles"]], "output": [[66, "output"]], "plots": [[66, "plots"]], "Variables": [[66, "variables"]], "Compiler flags": [[66, "compiler-flags"]], "Duplicate Base Source Name": [[66, "duplicate-base-source-name"]], "Library routines in Makefiles": [[67, "library-routines-in-makefiles"]], "Replacing files with the same name as library files": [[67, "replacing-files-with-the-same-name-as-library-files"]], "Using a modified library routine with a different name": [[67, "using-a-modified-library-routine-with-a-different-name"]], "Manning friction term": [[68, "manning-friction-term"]], "The mapc2p function": [[69, "the-mapc2p-function"]], "Marching Front algorithm": [[70, "marching-front-algorithm"]], "Function arguments": [[70, "function-arguments"]], "output array": [[70, "output-array"]], "creating a masked array": [[70, "creating-a-masked-array"]], "topofile mask for initializing dry points": [[70, "topofile-mask-for-initializing-dry-points"]], "fgmax points": [[70, "fgmax-points"]], "flag regions": [[70, "flag-regions"]], "The mask argument": [[70, "the-mask-argument"]], "The previous_pts_chosen argument": [[70, "the-previous-pts-chosen-argument"]], "Finding all points below a given elevation": [[70, "finding-all-points-below-a-given-elevation"]], "Create a buffer zone along shore": [[70, "create-a-buffer-zone-along-shore"]], "Choose points only near shore": [[70, "choose-points-only-near-shore"]], "Write out the masked array indicating fgmax points": [[70, "write-out-the-masked-array-indicating-fgmax-points"]], "Creating an AMR flag region": [[70, "creating-an-amr-flag-region"]], "Determining dry areas below MHW": [[70, "determining-dry-areas-below-mhw"]], "Plotting using Matlab": [[71, "plotting-using-matlab"]], "The Matlab search path": [[71, "the-matlab-search-path"]], "Creating output files": [[71, "creating-output-files"]], "The plotclaw command": [[71, "the-plotclaw-command"]], "The setplot file": [[71, "the-setplot-file"]], "The afterframe file": [[71, "the-afterframe-file"]], "Getting help": [[71, "getting-help"]], "Trouble shooting": [[71, "trouble-shooting"]], "Output files not found": [[71, "output-files-not-found"]], "MaxFrames not set": [[71, "maxframes-not-set"]], "Switching examples": [[71, "switching-examples"]], "Matlab Gallery": [[71, "matlab-gallery"]], "Nearshore interpolation": [[72, "nearshore-interpolation"]], "Using NetCDF output": [[73, "using-netcdf-output"]], "Creating a new application directory": [[74, "creating-a-new-application-directory"]], "Copying an existing example": [[74, "copying-an-existing-example"]], "Earthquake sources: Fault slip and the Okada model": [[75, "earthquake-sources-fault-slip-and-the-okada-model"]], "Fault slip on rectangular subfaults": [[75, "fault-slip-on-rectangular-subfaults"]], "Okada model": [[75, "okada-model"]], "Kinematic rupture": [[75, "kinematic-rupture"]], "Fault slip on triangular subfaults": [[75, "fault-slip-on-triangular-subfaults"]], "Using OpenMP": [[76, "using-openmp"]], "Using OpenMP with AMR": [[76, "using-openmp-with-amr"]], "Fixed grid output in GeoClaw": [[76, "fixed-grid-output-in-geoclaw"]], "Output data sytles and formats": [[77, "output-data-sytles-and-formats"]], "Output style": [[77, "output-style"]], "Output data formats": [[77, "output-data-formats"]], "ASCII output data format": [[77, "ascii-output-data-format"]], "fort.t0002": [[77, "fort-t0002"]], "fort.q0002": [[77, "fort-q0002"]], "Raw binary output data formats": [[77, "raw-binary-output-data-formats"]], "NetCDF output data format": [[77, "netcdf-output-data-format"]], "Output of aux arrays": [[77, "output-of-aux-arrays"]], "Which Clawpack solver should I use?": [[78, "which-clawpack-solver-should-i-use"]], "Installation and user interface": [[78, "installation-and-user-interface"]], "Algorithmic differences": [[78, "algorithmic-differences"]], "Parallel computing": [[78, "parallel-computing"]], "Clawpack Community Photos": [[79, "clawpack-community-photos"]], "2016 Developers\u2019 workshop at University of Washington": [[79, "id1"]], "2015 Developers\u2019 workshop at University of Utah": [[79, "id2"]], "2014 HPC3 workshop at KAUST": [[79, "id3"]], "2013 Claw-Dev workshop at UW": [[79, "id4"]], "2012 HPC3 workshop at KAUST": [[79, "id6"]], "2011 coding sprints at UW": [[79, "coding-sprints-at-uw"]], "2010 GeoClaw hacking UW": [[79, "geoclaw-hacking-uw"]], "Plotting examples": [[80, "plotting-examples"]], "Plotting with Visclaw": [[81, "plotting-with-visclaw"]], "Plotting as post-processing": [[81, "plotting-as-post-processing"]], "Plotting on the fly": [[81, "plotting-on-the-fly"]], "Plotting hints and FAQ": [[82, "plotting-hints-and-faq"]], "What\u2019s the difference between make .plots and make plots ?": [[82, "what-s-the-difference-between-make-plots-and-make-plots"]], "How to plot a something other than a component of q?": [[82, "how-to-plot-a-something-other-than-a-component-of-q"]], "How to add another curve to a plot, e.g. the true solution?": [[82, "how-to-add-another-curve-to-a-plot-e-g-the-true-solution"]], "How to change the title in a plot?": [[82, "how-to-change-the-title-in-a-plot"]], "How to specify outdir, the directory to find fort.* files for plotting?": [[82, "how-to-specify-outdir-the-directory-to-find-fort-files-for-plotting"]], "How to specify a different outdir for some plot item?": [[82, "how-to-specify-a-different-outdir-for-some-plot-item"]], "How to set plot parameters that are not provided as attributes of ClawPlotItem?": [[82, "how-to-set-plot-parameters-that-are-not-provided-as-attributes-of-clawplotitem"]], "How to change the size or background color of a figure?": [[82, "how-to-change-the-size-or-background-color-of-a-figure"]], "Specifying colormaps for pcolor or contourf plots": [[82, "specifying-colormaps-for-pcolor-or-contourf-plots"]], "How to debug setplot.py?": [[82, "how-to-debug-setplot-py"]], "Plotting routines for GeoClaw": [[83, "plotting-routines-for-geoclaw"]], "Plotting options in Python": [[84, "plotting-options-in-python"]], "Producing html plots from the command line": [[84, "producing-html-plots-from-the-command-line"]], "Producing a latex file with plots from the command line": [[84, "producing-a-latex-file-with-plots-from-the-command-line"]], "Setting plot parameters with a setplot function": [[84, "setting-plot-parameters-with-a-setplot-function"]], "Interactive plotting with Iplotclaw": [[84, "interactive-plotting-with-iplotclaw"]], "Access to current_data": [[84, "access-to-current-data"]], "printframes": [[84, "printframes"]], "Specifying what and how to plot": [[84, "specifying-what-and-how-to-plot"]], "Installation Prerequisites": [[85, "installation-prerequisites"]], "Operating system": [[85, "operating-system"]], "Fortran": [[85, "fortran"]], "Python": [[85, "python"]], "pip": [[85, "pip"]], "Git": [[85, "git"]], "About PyClaw": [[86, "about-pyclaw"]], "Contributors": [[86, "contributors"]], "PyClaw Basics": [[87, "pyclaw-basics"]], "Understanding Pyclaw Classes": [[88, "understanding-pyclaw-classes"]], "Flow of a Pyclaw Simulation": [[88, "flow-of-a-pyclaw-simulation"]], "Creation of a Pyclaw Solution": [[88, "creation-of-a-pyclaw-solution"]], "Creation of a Pyclaw Solver": [[88, "creation-of-a-pyclaw-solver"]], "Creating and Running a Simulation with Controller": [[88, "creating-and-running-a-simulation-with-controller"]], "Restarting a simulation": [[88, "restarting-a-simulation"]], "Outputting aux values": [[88, "outputting-aux-values"]], "Outputting derived quantities": [[88, "outputting-derived-quantities"], [98, "outputting-derived-quantities"]], "Porting a problem from Clawpack 4.6.x to PyClaw": [[89, "porting-a-problem-from-clawpack-4-6-x-to-pyclaw"]], "Running PyClaw in the cloud": [[90, "running-pyclaw-in-the-cloud"]], "Sage Math Cloud": [[90, "sage-math-cloud"]], "Pyclaw Controller Class": [[91, "pyclaw-controller-class"]], "pyclaw.controller.Controller": [[91, "pyclaw-controller-controller"]], "Pyclaw Limiters": [[92, "pyclaw-limiters"]], "clawpack.pyclaw.limiters.tvd": [[92, "module-clawpack.pyclaw.limiters.tvd"]], "CFL Independent Limiters": [[92, "cfl-independent-limiters"]], "CFL Dependent Limiters": [[92, "cfl-dependent-limiters"]], "Working with PyClaw\u2019s built-in examples": [[93, "working-with-pyclaw-s-built-in-examples"]], "Running and plotting examples": [[93, "running-and-plotting-examples"]], "Interactively in IPython": [[93, "interactively-in-ipython"]], "Built-in examples": [[93, "built-in-examples"]], "Adding new examples": [[93, "adding-new-examples"]], "PyClaw Geometry": [[94, "pyclaw-geometry"]], "Serial Geometry Objects": [[94, "serial-geometry-objects"]], "pyclaw.geometry.Domain": [[94, "pyclaw-geometry-domain"]], "pyclaw.geometry.Patch": [[94, "pyclaw-geometry-patch"]], "pyclaw.geometry.Grid": [[94, "pyclaw-geometry-grid"]], "pyclaw.geometry.Dimension": [[94, "pyclaw-geometry-dimension"]], "Parallel Geometry Objects": [[94, "parallel-geometry-objects"]], "petclaw.geometry.Domain": [[94, "petclaw-geometry-domain"]], "petclaw.geometry.Patch": [[94, "petclaw-geometry-patch"]], "Going Further": [[95, "going-further"]], "PyClaw installation": [[96, "pyclaw-installation"]], "Features": [[96, "features"]], "PyClaw Documentation": [[96, "pyclaw-documentation"]], "PyClaw Modules reference documentation": [[96, "pyclaw-modules-reference-documentation"]], "Riemann Solvers reference documentation": [[96, "riemann-solvers-reference-documentation"]], "Indices and tables": [[96, "indices-and-tables"]], "Citing PyClaw": [[96, "citing-pyclaw"]], "Pyclaw Input/Output Package": [[97, "pyclaw-input-output-package"]], "pyclaw.fileio.ascii": [[97, "module-clawpack.pyclaw.fileio.ascii"]], "pyclaw.fileio.binary": [[97, "module-clawpack.pyclaw.fileio.binary"]], "pyclaw.fileio.hdf5": [[97, "module-clawpack.pyclaw.fileio.hdf5"]], "pyclaw.fileio.netcdf": [[97, "module-clawpack.pyclaw.fileio.netcdf"]], "PyClaw output": [[98, "pyclaw-output"]], "Output frames": [[98, "output-frames"]], "When output is saved/written": [[98, "when-output-is-saved-written"]], "Where and how output is written": [[98, "where-and-how-output-is-written"]], "What output is written": [[98, "what-output-is-written"]], "Outputting functionals": [[98, "outputting-functionals"]], "Using gauges": [[98, "using-gauges"]], "Logging": [[98, "logging"]], "Running in parallel": [[99, "running-in-parallel"]], "Installing PETSc": [[99, "installing-petsc"]], "Testing your installation": [[99, "testing-your-installation"], [160, "testing-your-installation"]], "Running and plotting an example": [[99, "running-and-plotting-an-example"]], "Tips for making your application run correctly in parallel": [[99, "tips-for-making-your-application-run-correctly-in-parallel"]], "Passing options to PETSc": [[99, "passing-options-to-petsc"]], "Plotting PyClaw results": [[100, "plotting-pyclaw-results"]], "Basics": [[100, "basics"]], "Plotting result from parallel runs": [[100, "plotting-result-from-parallel-runs"]], "Setting up your own problem": [[101, "setting-up-your-own-problem"]], "Writing the initialization script": [[101, "writing-the-initialization-script"]], "Setting initial conditions": [[101, "setting-initial-conditions"]], "Setting auxiliary variables": [[101, "setting-auxiliary-variables"]], "Setting boundary conditions": [[101, "setting-boundary-conditions"]], "Setting solver options": [[101, "setting-solver-options"]], "Using your own Riemann solver": [[101, "using-your-own-riemann-solver"]], "Adding source terms": [[101, "adding-source-terms"]], "Setting up the Makefile": [[101, "setting-up-the-makefile"]], "Riemann Solver Package": [[102, "riemann-solver-package"]], "Acoustics": [[102, "acoustics"]], "Advection": [[102, "advection"]], "Burgers Equation": [[102, "burgers-equation"]], "Euler Equations": [[102, "euler-equations"]], "Shallow Water Equations": [[102, "shallow-water-equations"]], "PyClaw Solutions": [[103, "pyclaw-solutions"]], "pyclaw.solution.Solution": [[103, "pyclaw-solution-solution"]], "Using PyClaw\u2019s solvers: Classic and SharpClaw": [[104, "using-pyclaw-s-solvers-classic-and-sharpclaw"]], "SharpClaw Solvers": [[104, "sharpclaw-solvers"]], "pyclaw.sharpclaw": [[104, "pyclaw-sharpclaw"]], "Pyclaw Classic Clawpack Solvers": [[104, "pyclaw-classic-clawpack-solvers"]], "pyclaw.classic.solver": [[104, "pyclaw-classic-solver"]], "Change to Custom BC Function Signatures": [[104, "change-to-custom-bc-function-signatures"]], "Installing PyClaw": [[105, "installing-pyclaw"]], "Dependencies: Python, gfortran, numpy, and matplotlib": [[105, "dependencies-python-gfortran-numpy-and-matplotlib"]], "Obtaining Python, numpy, and matplotlib": [[105, "obtaining-python-numpy-and-matplotlib"]], "Clawpack": [[105, "clawpack"]], "Testing your installation with nose": [[105, "testing-your-installation-with-nose"]], "Next steps": [[105, "next-steps"]], "PyClaw State": [[106, "pyclaw-state"]], "Serial pyclaw.state.State": [[106, "serial-pyclaw-state-state"]], "Parallel petclaw.state.State": [[106, "parallel-petclaw-state-state"]], "Troubleshooting": [[107, "troubleshooting"], [165, "troubleshooting"]], "Compilation errors": [[107, "compilation-errors"]], "Use Fortran-ordered arrays": [[107, "use-fortran-ordered-arrays"]], "Installation": [[107, "installation"]], "PyClaw tutorial: Solve the acoustics equations": [[108, "pyclaw-tutorial-solve-the-acoustics-equations"]], "The Solver": [[108, "the-solver"]], "The domain": [[108, "the-domain"]], "Initial condition": [[108, "initial-condition"]], "Problem-specific parameters": [[108, "problem-specific-parameters"]], "The controller": [[108, "the-controller"]], "Pyclaw Utility Module": [[109, "pyclaw-utility-module"]], "pyclaw.util": [[109, "module-clawpack.pyclaw.util"]], "Python Hints": [[110, "python-hints"]], "Dropping support for Python 2.7": [[110, "dropping-support-for-python-2-7"]], "References and tutorials": [[110, "references-and-tutorials"]], "Notebooks": [[110, "notebooks"]], "Python path": [[111, "python-path"]], "whichclaw.py": [[111, "whichclaw-py"]], "Which version was imported?": [[111, "which-version-was-imported"]], "sys.path": [[111, "sys-path"]], "easy-install.pth": [[111, "easy-install-pth"]], "PYTHONPATH": [[111, "pythonpath"], [146, "pythonpath"]], "qinit default routines": [[112, "qinit-default-routines"]], "qinit routine in GeoClaw": [[112, "qinit-routine-in-geoclaw"]], "Quick start guide for storm surge modeling": [[113, "quick-start-guide-for-storm-surge-modeling"]], "Quick start guide for tsunami modeling": [[114, "quick-start-guide-for-tsunami-modeling"]], "AMR refinement criteria": [[115, "amr-refinement-criteria"]], "Flagging criteria": [[115, "flagging-criteria"]], "flag2refine": [[115, "flag2refine"]], "Richardson extrapolation": [[115, "richardson-extrapolation"]], "Specifying AMR regions": [[115, "specifying-amr-regions"]], "Implementation": [[115, "implementation"]], "Flagging criteria in GeoClaw": [[115, "flagging-criteria-in-geoclaw"]], "Regression testing": [[116, "regression-testing"]], "Running the tests": [[116, "running-the-tests"], [116, "id2"]], "Fortran codes": [[116, "fortran-codes"]], "Travis continuous integration": [[116, "travis-continuous-integration"]], "Diff tools for checking test output": [[116, "diff-tools-for-checking-test-output"]], "chardiff tool for line-by-line comparison of output files": [[116, "chardiff-tool-for-line-by-line-comparison-of-output-files"]], "imagediff tool for pixel comparison of plots": [[116, "imagediff-tool-for-pixel-comparison-of-plots"]], "Running and writing tests in PyClaw": [[116, "running-and-writing-tests-in-pyclaw"]], "Running serial tests simultaneously": [[116, "running-serial-tests-simultaneously"]], "Running a specific test": [[116, "running-a-specific-test"]], "Doctests": [[116, "doctests"]], "Writing New Tests": [[116, "writing-new-tests"]], "v5.0.0 release notes": [[117, "v5-0-0-release-notes"]], "Changes to classic, riemann, amrclaw, geoclaw, visclaw": [[117, "changes-to-classic-riemann-amrclaw-geoclaw-visclaw"]], "v5.10.0 release notes": [[118, "v5-10-0-release-notes"]], "v5.1.0 release notes": [[119, "v5-1-0-release-notes"]], "v5.2.0 release notes": [[120, "v5-2-0-release-notes"]], "v5.2.1 release notes": [[121, "v5-2-1-release-notes"]], "v5.2.2 release notes": [[122, "v5-2-2-release-notes"]], "v5.3.0 release notes": [[123, "v5-3-0-release-notes"]], "v5.3.1 release notes": [[124, "v5-3-1-release-notes"]], "v5.4.0 release notes": [[125, "v5-4-0-release-notes"]], "Global changes": [[125, "global-changes"]], "v5.4.1 release notes": [[126, "v5-4-1-release-notes"]], "Changes to documentation": [[126, "changes-to-documentation"], [127, "changes-to-documentation"]], "v5.5.0 release notes": [[127, "v5-5-0-release-notes"]], "v5.6.0 release notes": [[128, "v5-6-0-release-notes"]], "v5.6.1 release notes": [[129, "v5-6-1-release-notes"]], "v5.7.0 release notes": [[130, "v5-7-0-release-notes"]], "Python support": [[130, "python-support"]], "v5.7.1 release notes": [[131, "v5-7-1-release-notes"]], "v5.8.0 release notes": [[132, "v5-8-0-release-notes"]], "v5.8.1 release notes": [[133, "v5-8-1-release-notes"]], "v5.8.2 release notes": [[134, "v5-8-2-release-notes"]], "v5.9.0 release notes": [[135, "v5-9-0-release-notes"]], "v5.9.1 release notes": [[136, "v5-9-1-release-notes"]], "v5.9.2 release notes": [[137, "v5-9-2-release-notes"]], "Releases of Clawpack and release notes": [[138, "releases-of-clawpack-and-release-notes"]], "Other notes:": [[138, "other-notes"]], "Releases:": [[138, "id1"]], "Clawpack 4.x": [[138, "clawpack-4-x"]], "Checkpointing and restarting": [[139, "checkpointing-and-restarting"]], "Checkpointing a computation": [[139, "checkpointing-a-computation"]], "Restarting a computation": [[139, "restarting-a-computation"]], "Modifying the Makefile for a restart": [[139, "modifying-the-makefile-for-a-restart"]], "Output files after a restart": [[139, "output-files-after-a-restart"]], "Riemann solvers": [[140, "riemann-solvers"]], "One-dimensional Riemann solver": [[140, "one-dimensional-riemann-solver"]], "Pointwise Riemann solvers": [[140, "pointwise-riemann-solvers"]], "f-wave Riemann solvers": [[140, "f-wave-riemann-solvers"]], "2D Riemann solvers": [[140, "d-riemann-solvers"]], "Using a custom solver": [[140, "using-a-custom-solver"]], "Adding a solver to the Riemann repository": [[140, "adding-a-solver-to-the-riemann-repository"]], "Shallow water Riemann solvers in Clawpack": [[141, "shallow-water-riemann-solvers-in-clawpack"]], "One dimension": [[141, "one-dimension"]], "Two dimensions": [[141, "two-dimensions"]], "Layered shallow water equations": [[141, "layered-shallow-water-equations"]], "Potentially useful contributions (what\u2019s missing)": [[141, "potentially-useful-contributions-whats-missing"]], "Demonstrations": [[141, "demonstrations"]], "Roe": [[141, "roe"]], "HLL": [[141, "hll"]], "Ruled Rectangles": [[142, "ruled-rectangles"]], "Relation to convex polygons": [[142, "relation-to-convex-polygons"]], "Other attributes and methods": [[142, "other-attributes-and-methods"]], "ds": [[142, "ds"]], "slu": [[142, "slu"]], "bounding_box": [[142, "bounding-box"]], "mask_outside": [[142, "mask-outside"]], "read and write, and instantiating from a file": [[142, "read-and-write-and-instantiating-from-a-file"]], "make_kml": [[142, "make-kml"]], "A GeoClaw AMR flag region": [[142, "a-geoclaw-amr-flag-region"]], "A simple rectangle": [[142, "a-simple-rectangle"]], "Defining a Ruled Rectangle covering selected cells": [[142, "defining-a-ruled-rectangle-covering-selected-cells"]], "Example covering the continental shelf": [[142, "example-covering-the-continental-shelf"]], "Setting sea_level": [[143, "setting-sea-level"]], "Set Eta Init \u2013 spatially varying initial surface elevation": [[144, "set-eta-init-spatially-varying-initial-surface-elevation"]], "Default behavior, adjusting sea level by seismic deformation": [[144, "default-behavior-adjusting-sea-level-by-seismic-deformation"]], "Other use cases": [[144, "other-use-cases"]], "setaux default routines": [[145, "setaux-default-routines"]], "setaux routine in GeoClaw": [[145, "setaux-routine-in-geoclaw"]], "Set environment variables": [[146, "set-environment-variables"]], "CLAW": [[146, "claw"]], "FC": [[146, "fc"]], "Using setplot.py to specify the desired plots": [[147, "using-setplot-py-to-specify-the-desired-plots"]], "Plotting Data Objects": [[147, "plotting-data-objects"]], "Overview": [[147, "overview"]], "Specifying classic run-time parameters in setrun.py": [[148, "specifying-classic-run-time-parameters-in-setrun-py"]], "Input": [[148, "input"], [149, "input"]], "Output": [[148, "output"], [149, "output"]], "Run-time parameters": [[148, "run-time-parameters"], [149, "run-time-parameters"]], "Specifying AMRClaw run-time parameters in setrun.py": [[149, "specifying-amrclaw-run-time-parameters-in-setrun-py"]], "Special AMR parameters": [[149, "special-amr-parameters"]], "Debugging flags for additional printing": [[149, "debugging-flags-for-additional-printing"]], "Sample setrun.py module for AMRClaw": [[150, "sample-setrun-py-module-for-amrclaw"]], "Specifying GeoClaw parameters in setrun.py": [[151, "specifying-geoclaw-parameters-in-setrun-py"]], "Additional AMR parameters": [[151, "additional-amr-parameters"]], "General geo parameters": [[151, "general-geo-parameters"]], "Topography data file parameters": [[151, "topography-data-file-parameters"]], "qinit data file parameters": [[151, "qinit-data-file-parameters"]], "Force some cells to be initially dry": [[151, "force-some-cells-to-be-initially-dry"]], "Adjust sea level in some regions": [[151, "adjust-sea-level-in-some-regions"]], "AMR refinement region parameters": [[151, "amr-refinement-region-parameters"]], "Deprecated Fixedgrid output parameters": [[151, "deprecated-fixedgrid-output-parameters"]], "Fixed grid maximum monitoring / arrival times": [[151, "fixed-grid-maximum-monitoring-arrival-times"]], "Fixed grid output": [[151, "fixed-grid-output"]], "Storm Specification Data": [[151, "storm-specification-data"]], "Sample setrun.py module for classic Clawpack": [[152, "sample-setrun-py-module-for-classic-clawpack"]], "Saving and sharing results": [[153, "saving-and-sharing-results"]], "Making webpages of plots": [[153, "making-webpages-of-plots"]], "Sharing your results": [[153, "sharing-your-results"]], "Jupyter notebooks": [[153, "jupyter-notebooks"]], "Source terms for shallow water on the sphere": [[154, "source-terms-for-shallow-water-on-the-sphere"]], "Compiling the Sphinx documentation locally": [[155, "compiling-the-sphinx-documentation-locally"]], "src1d default routines": [[156, "src1d-default-routines"]], "src1d routine in GeoClaw": [[156, "src1d-routine-in-geoclaw"]], "src default routines": [[157, "src-default-routines"]], "src routine in GeoClaw": [[157, "src-routine-in-geoclaw"]], "Storm Specification Class and Tools": [[158, "storm-specification-class-and-tools"]], "Sources for Storm Surge Data": [[159, "sources-for-storm-surge-data"]], "Timing Statistics": [[161, "timing-statistics"]], "Topography data": [[162, "topography-data"]], "Downloading topography files": [[162, "downloading-topography-files"]], "NetCDF format": [[162, "netcdf-format"]], "Topography displacement files": [[162, "topography-displacement-files"]], "qinit data file": [[162, "qinit-data-file"]], "Python tools for working with topo and dtopo": [[163, "python-tools-for-working-with-topo-and-dtopo"]], "topotools module for working with topography data": [[164, "topotools-module-for-working-with-topography-data"]], "Troubleshooting Installation": [[165, "troubleshooting-installation"]], "Troubleshooting Fortran:": [[165, "troubleshooting-fortran"]], "Setting the Fortran compiler to be used by f2py (pip)": [[165, "setting-the-fortran-compiler-to-be-used-by-f2py-pip"]], "Trouble compiling Fortran code at the command line": [[165, "trouble-compiling-fortran-code-at-the-command-line"]], "Trouble running \u201cmake .exe\u201d": [[165, "trouble-running-make-exe"]], "Trouble running \u201cmake .data\u201d": [[165, "trouble-running-make-data"]], "Trouble running \u201cmake .output\u201d": [[165, "trouble-running-make-output"]], "Trouble running \u201cmake .plots\u201d": [[165, "trouble-running-make-plots"]], "Some sources of tsunami data": [[166, "some-sources-of-tsunami-data"]], "Topography / bathymetry": [[166, "topography-bathymetry"]], "Earthquake source models": [[166, "earthquake-source-models"]], "DART buoy data": [[166, "dart-buoy-data"]], "Tide gauges": [[166, "tide-gauges"]], "User files required for the Fortran code": [[167, "user-files-required-for-the-fortran-code"]], "Specifying the initial conditions": [[167, "specifying-the-initial-conditions"]], "Specifying the Riemann solver": [[167, "specifying-the-riemann-solver"]], "Specifying boundary conditions": [[167, "specifying-boundary-conditions"]], "Specifying problem-specific data": [[167, "specifying-problem-specific-data"]], "Specifying spatially-varying data using setaux": [[167, "specifying-spatially-varying-data-using-setaux"]], "Using b4step for work to be done before each time step": [[167, "using-b4step-for-work-to-be-done-before-each-time-step"]], "Using src for source terms": [[167, "using-src-for-source-terms"]], "Using src1d for source terms with AMRClaw": [[167, "using-src1d-for-source-terms-with-amrclaw"]], "Plotting with VisIt": [[168, "plotting-with-visit"]], "Clawpack Virtual Machine": [[169, "clawpack-virtual-machine"]], "Wave-propagation algorithms": [[170, "wave-propagation-algorithms"]], "One space dimension": [[170, "one-space-dimension"]], "Godunov\u2019s method": [[170, "godunov-s-method"]], "High-resolution methods": [[170, "high-resolution-methods"]], "f-wave formulation": [[170, "f-wave-formulation"]], "Capacity functions": [[170, "capacity-functions"]], "Source terms": [[170, "source-terms"]]}, "indexentries": {"clawplotaxes (built-in class)": [[0, "ClawPlotAxes"]], "gethandle()": [[0, "gethandle"], [2, "gethandle"], [3, "gethandle"]], "new_plotitem()": [[0, "new_plotitem"]], "clawplotdata (built-in class)": [[1, "ClawPlotData"]], "clearfigures()": [[1, "clearfigures"]], "clearframes()": [[1, "clearframes"]], "getaxes()": [[1, "getaxes"]], "getfigure()": [[1, "getfigure"]], "getframe()": [[1, "getframe"], [3, "getframe"]], "getitem()": [[1, "getitem"]], "iplotclaw()": [[1, "iplotclaw"]], "new_plotfigure()": [[1, "new_plotfigure"]], "plotframe()": [[1, "plotframe"]], "printframes()": [[1, "printframes"]], "showitems()": [[1, "showitems"]], "clawplotfigure (built-in class)": [[2, "ClawPlotFigure"]], "new_plotaxes()": [[2, "new_plotaxes"]], "clawplotitem (built-in class)": [[3, "ClawPlotItem"]], "csvfault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.CSVFault"]], "dtopography (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.DTopography"]], "dtopography1d (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.DTopography1d"]], "fault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.Fault"]], "fault1d (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.Fault1d"]], "mo() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.Mo"]], "mo() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.Mo"]], "mw() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.Mw"]], "mw() (in module clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.Mw"]], "siftfault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.SiftFault"]], "subfault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.SubFault"]], "subfault1d (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d"]], "subdividedplanefault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.SubdividedPlaneFault"]], "tensorproductfault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.TensorProductFault"]], "ucsbfault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.UCSBFault"]], "calculate_geometry() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.calculate_geometry"]], "calculate_geometry_triangles() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.calculate_geometry_triangles"]], "centers (clawpack.geoclaw.dtopotools.subfault property)": [[32, "clawpack.geoclaw.dtopotools.SubFault.centers"]], "clawpack.geoclaw.dtopotools": [[32, "module-clawpack.geoclaw.dtopotools"]], "containing_rect() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.containing_rect"]], "convert_to_standard_units() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.convert_to_standard_units"]], "coordinate_specification (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.coordinate_specification"]], "coordinate_specification (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.coordinate_specification"]], "corners (clawpack.geoclaw.dtopotools.subfault property)": [[32, "clawpack.geoclaw.dtopotools.SubFault.corners"]], "create_dtopo_xy() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.create_dtopo_xy"]], "create_dtopography() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.create_dtopography"]], "dz_at_t() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.dZ_at_t"]], "dz_at_t() (clawpack.geoclaw.dtopotools.dtopography1d method)": [[32, "clawpack.geoclaw.dtopotools.DTopography1d.dZ_at_t"]], "dz_cellave_at_t() (clawpack.geoclaw.dtopotools.dtopography1d method)": [[32, "clawpack.geoclaw.dtopotools.DTopography1d.dZ_cellave_at_t"]], "dz_max() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.dZ_max"]], "depth (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.depth"]], "dip (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.dip"]], "dynamic_slip() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.dynamic_slip"]], "gauss_pts (clawpack.geoclaw.dtopotools.subfault property)": [[32, "clawpack.geoclaw.dtopotools.SubFault.gauss_pts"]], "latitude (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.latitude"]], "latitude (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.latitude"]], "length (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.length"]], "length (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.length"]], "longitude (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.longitude"]], "longitude (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.longitude"]], "module": [[32, "module-clawpack.geoclaw.dtopotools"], [35, "module-clawpack.geoclaw.fgmax_tools"], [37, "module-clawpack.geoclaw.fgout_tools"], [51, "module-clawpack.geoclaw.util"], [63, "module-clawpack.geoclaw.kmltools"], [92, "module-clawpack.pyclaw.limiters.tvd"], [97, "module-clawpack.pyclaw.fileio.ascii"], [97, "module-clawpack.pyclaw.fileio.binary"], [97, "module-clawpack.pyclaw.fileio.hdf5"], [97, "module-clawpack.pyclaw.fileio.netcdf"], [102, "module-clawpack.riemann.acoustics_1D_py"], [102, "module-clawpack.riemann.advection_1D_py"], [102, "module-clawpack.riemann.burgers_1D_py"], [102, "module-clawpack.riemann.euler_1D_py"], [102, "module-clawpack.riemann.shallow_1D_py"], [109, "module-clawpack.pyclaw.util"], [158, "module-clawpack.geoclaw.surge.storm"], [164, "module-clawpack.geoclaw.topotools"]], "mu (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.mu"]], "okada() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.okada"]], "plot_dz_colors() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.plot_dZ_colors"]], "plot_dz_colors() (in module clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.plot_dZ_colors"]], "plot_dz_contours() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.plot_dZ_contours"]], "plot_dz_contours() (in module clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.plot_dZ_contours"]], "plot_subfaults() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.plot_subfaults"]], "plot_subfaults_depth() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.plot_subfaults_depth"]], "rake (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rake"]], "rake (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.rake"]], "read() (clawpack.geoclaw.dtopotools.csvfault method)": [[32, "clawpack.geoclaw.dtopotools.CSVFault.read"]], "read() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.read"]], "read() (clawpack.geoclaw.dtopotools.dtopography1d method)": [[32, "clawpack.geoclaw.dtopotools.DTopography1d.read"]], "read() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.read"]], "read() (clawpack.geoclaw.dtopotools.ucsbfault method)": [[32, "clawpack.geoclaw.dtopotools.UCSBFault.read"]], "rise_fraction() (in module clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.rise_fraction"]], "rise_shape (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rise_shape"]], "rise_time (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rise_time"]], "rise_time_starting (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rise_time_starting"]], "rupture_time (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rupture_time"]], "rupture_type (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rupture_type"]], "set_corners() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.set_corners"]], "set_dynamic_slip() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.set_dynamic_slip"]], "set_subfaults() (clawpack.geoclaw.dtopotools.siftfault method)": [[32, "clawpack.geoclaw.dtopotools.SiftFault.set_subfaults"]], "slip (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.slip"]], "strike (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.strike"]], "strike (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.strike"]], "strike_direction() (in module clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.strike_direction"]], "subdivide() (clawpack.geoclaw.dtopotools.subdividedplanefault method)": [[32, "clawpack.geoclaw.dtopotools.SubdividedPlaneFault.subdivide"]], "width (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.width"]], "write() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.write"]], "write() (clawpack.geoclaw.dtopotools.dtopography1d method)": [[32, "clawpack.geoclaw.dtopotools.DTopography1d.write"]], "write() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.write"]], "fgmaxgrid (class in clawpack.geoclaw.fgmax_tools)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid"]], "adjust_fgmax_1d() (in module clawpack.geoclaw.fgmax_tools)": [[35, "clawpack.geoclaw.fgmax_tools.adjust_fgmax_1d"]], "bounding_box() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.bounding_box"]], "clawpack.geoclaw.fgmax_tools": [[35, "module-clawpack.geoclaw.fgmax_tools"]], "interp_dz() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.interp_dz"]], "ps4_to_arrays() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.ps4_to_arrays"]], "read_fgmax_grids_data() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.read_fgmax_grids_data"]], "read_output() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.read_output"]], "write_to_fgmax_data() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.write_to_fgmax_data"]], "b (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.B"]], "fgoutframe (class in clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame"]], "fgoutgrid (class in clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid"]], "x (clawpack.geoclaw.fgout_tools.fgoutgrid property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.X"], [37, "clawpack.geoclaw.fgout_tools.FGoutGrid.x"]], "y (clawpack.geoclaw.fgout_tools.fgoutgrid property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.Y"], [37, "clawpack.geoclaw.fgout_tools.FGoutGrid.y"]], "clawpack.geoclaw.fgout_tools": [[37, "module-clawpack.geoclaw.fgout_tools"]], "eta (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.eta"]], "extent_centers (clawpack.geoclaw.fgout_tools.fgoutgrid property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.extent_centers"]], "extent_edges (clawpack.geoclaw.fgout_tools.fgoutgrid property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.extent_edges"]], "get_as_array() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.get_as_array"]], "h (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.h"]], "hss (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.hss"]], "hu (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.hu"]], "hv (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.hv"]], "make_fgout_fcn_xy() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.make_fgout_fcn_xy"]], "make_fgout_fcn_xyt() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.make_fgout_fcn_xyt"]], "print_netcdf_info() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.print_netcdf_info"]], "read_fgout_grids_data() (clawpack.geoclaw.fgout_tools.fgoutgrid method)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.read_fgout_grids_data"]], "read_frame() (clawpack.geoclaw.fgout_tools.fgoutgrid method)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.read_frame"]], "read_netcdf() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.read_netcdf"]], "read_netcdf_arrays() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.read_netcdf_arrays"]], "s (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.s"]], "set_plotdata() (clawpack.geoclaw.fgout_tools.fgoutgrid method)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.set_plotdata"]], "u (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.u"]], "v (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.v"]], "write_netcdf() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.write_netcdf"]], "write_to_fgout_data() (clawpack.geoclaw.fgout_tools.fgoutgrid method)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.write_to_fgout_data"]], "bearing() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.bearing"]], "clawpack.geoclaw.util": [[51, "module-clawpack.geoclaw.util"]], "dist_latlong2meters() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.dist_latlong2meters"]], "dist_meters2latlong() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.dist_meters2latlong"]], "dms2decimal() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.dms2decimal"]], "fetch_noaa_tide_data() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.fetch_noaa_tide_data"]], "gctransect() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.gctransect"]], "haversine() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.haversine"]], "inv_haversine() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.inv_haversine"]], "box2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.box2kml"]], "clawpack.geoclaw.kmltools": [[63, "module-clawpack.geoclaw.kmltools"]], "deg2dms() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.deg2dms"]], "dtopo2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.dtopo2kml"]], "f2s() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.f2s"]], "fgmax2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.fgmax2kml"]], "fgout2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.fgout2kml"]], "gauges2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.gauges2kml"]], "kml_build_colorbar() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.kml_build_colorbar"]], "kml_cb() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.kml_cb"]], "kml_png() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.kml_png"]], "kml_timespan() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.kml_timespan"]], "line2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.line2kml"]], "make_input_data_kmls() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.make_input_data_kmls"]], "pcolorcells_for_kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.pcolorcells_for_kml"]], "png2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.png2kml"]], "poly2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.poly2kml"]], "quad2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.quad2kml"]], "regions2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.regions2kml"]], "topo2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.topo2kml"]], "topo2kmz() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.topo2kmz"]], "transect2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.transect2kml"]], "controller (class in clawpack.pyclaw.controller)": [[91, "clawpack.pyclaw.controller.Controller"]], "f_file_name (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.F_file_name"]], "f_path (clawpack.pyclaw.controller.controller property)": [[91, "clawpack.pyclaw.controller.Controller.F_path"]], "check_validity() (clawpack.pyclaw.controller.controller method)": [[91, "clawpack.pyclaw.controller.Controller.check_validity"]], "compute_f (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.compute_F"]], "compute_p (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.compute_p"]], "file_prefix_p (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.file_prefix_p"]], "frames (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.frames"]], "keep_copy (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.keep_copy"]], "nstepout (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.nstepout"]], "num_output_times (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.num_output_times"]], "out_times (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.out_times"]], "outdir (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.outdir"]], "outdir_p (clawpack.pyclaw.controller.controller property)": [[91, "clawpack.pyclaw.controller.Controller.outdir_p"]], "output_file_prefix (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.output_file_prefix"]], "output_format (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.output_format"]], "output_options (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.output_options"]], "output_style (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.output_style"]], "overwrite (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.overwrite"]], "plot() (clawpack.pyclaw.controller.controller method)": [[91, "clawpack.pyclaw.controller.Controller.plot"]], "plotdata (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.plotdata"]], "run() (clawpack.pyclaw.controller.controller method)": [[91, "clawpack.pyclaw.controller.Controller.run"]], "rundir (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.rundir"]], "runmake (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.runmake"]], "savecode (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.savecode"]], "solver (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.solver"]], "tfinal (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.tfinal"]], "verbosity (clawpack.pyclaw.controller.controller property)": [[91, "clawpack.pyclaw.controller.Controller.verbosity"]], "viewable_attributes (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.viewable_attributes"]], "write_aux_always (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.write_aux_always"]], "write_aux_init (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.write_aux_init"]], "xclawcmd (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.xclawcmd"]], "xclawerr (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.xclawerr"]], "xclawout (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.xclawout"]], "xdir (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.xdir"]], "arora_roe() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.arora_roe"]], "beta_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.beta_limiter"]], "cada_torrilhon_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.cada_torrilhon_limiter"]], "cada_torrilhon_limiter_nonlinear() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.cada_torrilhon_limiter_nonlinear"]], "cfl_superbee() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.cfl_superbee"]], "cfl_superbee_theta() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.cfl_superbee_theta"]], "clawpack.pyclaw.limiters.tvd": [[92, "module-clawpack.pyclaw.limiters.tvd"]], "hyperbee_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.hyperbee_limiter"]], "limit() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.limit"]], "mc_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.mc_limiter"]], "minmod_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.minmod_limiter"]], "superbee_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.superbee_limiter"]], "superpower_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.superpower_limiter"]], "theta_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.theta_limiter"]], "upper_bound_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.upper_bound_limiter"]], "van_leer_klein_sharpening_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.van_leer_klein_sharpening_limiter"]], "dimension (class in clawpack.pyclaw.geometry)": [[94, "clawpack.pyclaw.geometry.Dimension"]], "domain (class in clawpack.petclaw.geometry)": [[94, "clawpack.petclaw.geometry.Domain"]], "domain (class in clawpack.pyclaw.geometry)": [[94, "clawpack.pyclaw.geometry.Domain"]], "grid (class in clawpack.pyclaw.geometry)": [[94, "clawpack.pyclaw.geometry.Grid"]], "patch (class in clawpack.petclaw.geometry)": [[94, "clawpack.petclaw.geometry.Patch"]], "patch (class in clawpack.pyclaw.geometry)": [[94, "clawpack.pyclaw.geometry.Patch"]], "add_dimension() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.add_dimension"]], "add_dimension() (clawpack.pyclaw.geometry.patch method)": [[94, "clawpack.pyclaw.geometry.Patch.add_dimension"]], "add_gauges() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.add_gauges"]], "c_center() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.c_center"]], "c_centers (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.c_centers"]], "c_centers_with_ghost() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.c_centers_with_ghost"]], "c_nodes (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.c_nodes"]], "c_nodes_with_ghost() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.c_nodes_with_ghost"]], "centers (clawpack.pyclaw.geometry.dimension property)": [[94, "clawpack.pyclaw.geometry.Dimension.centers"]], "centers_with_ghost() (clawpack.pyclaw.geometry.dimension method)": [[94, "clawpack.pyclaw.geometry.Dimension.centers_with_ghost"]], "delta (clawpack.pyclaw.geometry.dimension property)": [[94, "clawpack.pyclaw.geometry.Dimension.delta"]], "delta (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.delta"]], "dimensional_split (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.dimensional_split"]], "dimensions (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.dimensions"]], "dimensions (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.dimensions"]], "fwave (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.fwave"]], "gauge_dir_name (clawpack.pyclaw.geometry.grid attribute)": [[94, "clawpack.pyclaw.geometry.Grid.gauge_dir_name"]], "gauge_file_names (clawpack.pyclaw.geometry.grid attribute)": [[94, "clawpack.pyclaw.geometry.Grid.gauge_file_names"]], "gauge_files (clawpack.pyclaw.geometry.grid attribute)": [[94, "clawpack.pyclaw.geometry.Grid.gauge_files"]], "gauges (clawpack.pyclaw.geometry.grid attribute)": [[94, "clawpack.pyclaw.geometry.Grid.gauges"]], "get_dim_attribute() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.get_dim_attribute"]], "get_dim_attribute() (clawpack.pyclaw.geometry.patch method)": [[94, "clawpack.pyclaw.geometry.Patch.get_dim_attribute"]], "grid (clawpack.pyclaw.geometry.domain property)": [[94, "clawpack.pyclaw.geometry.Domain.grid"]], "kernel_language (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.kernel_language"]], "level (clawpack.pyclaw.geometry.patch attribute)": [[94, "clawpack.pyclaw.geometry.Patch.level"]], "lower_global (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.lower_global"]], "mthlim (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.mthlim"]], "name (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.name"]], "nodes (clawpack.pyclaw.geometry.dimension property)": [[94, "clawpack.pyclaw.geometry.Dimension.nodes"]], "nodes_with_ghost() (clawpack.pyclaw.geometry.dimension method)": [[94, "clawpack.pyclaw.geometry.Dimension.nodes_with_ghost"]], "num_cells_global (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.num_cells_global"]], "num_dim (clawpack.pyclaw.geometry.domain property)": [[94, "clawpack.pyclaw.geometry.Domain.num_dim"]], "num_dim (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.num_dim"]], "num_dim (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.num_dim"]], "order (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.order"]], "p_center() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.p_center"]], "p_centers (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.p_centers"]], "p_nodes (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.p_nodes"]], "patch (clawpack.pyclaw.geometry.domain property)": [[94, "clawpack.pyclaw.geometry.Domain.patch"]], "patch_index (clawpack.pyclaw.geometry.patch attribute)": [[94, "clawpack.pyclaw.geometry.Patch.patch_index"]], "plot() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.plot"]], "setup_gauge_files() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.setup_gauge_files"]], "source_split (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.source_split"]], "step_source (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.step_source"]], "transverse_waves (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.transverse_waves"]], "upper_global (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.upper_global"]], "verbosity (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.verbosity"]], "clawpack.pyclaw.fileio.ascii": [[97, "module-clawpack.pyclaw.fileio.ascii"]], "clawpack.pyclaw.fileio.binary": [[97, "module-clawpack.pyclaw.fileio.binary"]], "clawpack.pyclaw.fileio.hdf5": [[97, "module-clawpack.pyclaw.fileio.hdf5"]], "clawpack.pyclaw.fileio.netcdf": [[97, "module-clawpack.pyclaw.fileio.netcdf"]], "read() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.read"]], "read() (in module clawpack.pyclaw.fileio.binary)": [[97, "clawpack.pyclaw.fileio.binary.read"]], "read() (in module clawpack.pyclaw.fileio.hdf5)": [[97, "clawpack.pyclaw.fileio.hdf5.read"]], "read() (in module clawpack.pyclaw.fileio.netcdf)": [[97, "clawpack.pyclaw.fileio.netcdf.read"]], "read_array() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.read_array"]], "read_patch_header() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.read_patch_header"]], "read_t() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.read_t"]], "write() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.write"]], "write() (in module clawpack.pyclaw.fileio.hdf5)": [[97, "clawpack.pyclaw.fileio.hdf5.write"]], "write() (in module clawpack.pyclaw.fileio.netcdf)": [[97, "clawpack.pyclaw.fileio.netcdf.write"]], "write_array() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.write_array"]], "acoustics_1d() (in module clawpack.riemann.acoustics_1d_py)": [[102, "clawpack.riemann.acoustics_1D_py.acoustics_1D"]], "advection_1d() (in module clawpack.riemann.advection_1d_py)": [[102, "clawpack.riemann.advection_1D_py.advection_1D"]], "burgers_1d() (in module clawpack.riemann.burgers_1d_py)": [[102, "clawpack.riemann.burgers_1D_py.burgers_1D"]], "clawpack.riemann.acoustics_1d_py": [[102, "module-clawpack.riemann.acoustics_1D_py"]], "clawpack.riemann.advection_1d_py": [[102, "module-clawpack.riemann.advection_1D_py"]], "clawpack.riemann.burgers_1d_py": [[102, "module-clawpack.riemann.burgers_1D_py"]], "clawpack.riemann.euler_1d_py": [[102, "module-clawpack.riemann.euler_1D_py"]], "clawpack.riemann.shallow_1d_py": [[102, "module-clawpack.riemann.shallow_1D_py"]], "euler_exact_1d() (in module clawpack.riemann.euler_1d_py)": [[102, "clawpack.riemann.euler_1D_py.euler_exact_1D"]], "euler_hll_1d() (in module clawpack.riemann.euler_1d_py)": [[102, "clawpack.riemann.euler_1D_py.euler_hll_1D"]], "euler_hllc_1d() (in module clawpack.riemann.euler_1d_py)": [[102, "clawpack.riemann.euler_1D_py.euler_hllc_1D"]], "euler_roe_1d() (in module clawpack.riemann.euler_1d_py)": [[102, "clawpack.riemann.euler_1D_py.euler_roe_1D"]], "shallow_exact_1d() (in module clawpack.riemann.shallow_1d_py)": [[102, "clawpack.riemann.shallow_1D_py.shallow_exact_1D"]], "shallow_fwave_1d() (in module clawpack.riemann.shallow_1d_py)": [[102, "clawpack.riemann.shallow_1D_py.shallow_fwave_1d"]], "shallow_hll_1d() (in module clawpack.riemann.shallow_1d_py)": [[102, "clawpack.riemann.shallow_1D_py.shallow_hll_1D"]], "shallow_roe_1d() (in module clawpack.riemann.shallow_1d_py)": [[102, "clawpack.riemann.shallow_1D_py.shallow_roe_1D"]], "solution (class in clawpack.pyclaw.solution)": [[103, "clawpack.pyclaw.solution.Solution"]], "is_valid() (clawpack.pyclaw.solution.solution method)": [[103, "clawpack.pyclaw.solution.Solution.is_valid"]], "patch (clawpack.pyclaw.solution.solution property)": [[103, "clawpack.pyclaw.solution.Solution.patch"]], "plot() (clawpack.pyclaw.solution.solution method)": [[103, "clawpack.pyclaw.solution.Solution.plot"]], "read() (clawpack.pyclaw.solution.solution method)": [[103, "clawpack.pyclaw.solution.Solution.read"]], "set_all_states() (clawpack.pyclaw.solution.solution method)": [[103, "clawpack.pyclaw.solution.Solution.set_all_states"]], "start_frame (clawpack.pyclaw.solution.solution property)": [[103, "clawpack.pyclaw.solution.Solution.start_frame"]], "state (clawpack.pyclaw.solution.solution property)": [[103, "clawpack.pyclaw.solution.Solution.state"]], "write() (clawpack.pyclaw.solution.solution method)": [[103, "clawpack.pyclaw.solution.Solution.write"]], "clawsolver (class in clawpack.pyclaw.classic.solver)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver"]], "sharpclawsolver (class in clawpack.pyclaw.sharpclaw.solver)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver"]], "accept_reject_step() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.accept_reject_step"]], "aux_time_dep (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.aux_time_dep"]], "call_before_step_each_stage (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.call_before_step_each_stage"]], "cfl_desired (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.cfl_desired"]], "cfl_max (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.cfl_max"]], "char_decomp (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.char_decomp"]], "check_3rd_ord_cond() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.check_3rd_ord_cond"]], "dq() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.dq"]], "dq_src (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.dq_src"]], "dqdt() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.dqdt"]], "fwave (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.fwave"]], "fwave (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.fwave"]], "get_dt_new() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.get_dt_new"]], "kernel_language (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.kernel_language"]], "kernel_language (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.kernel_language"]], "lim_type (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.lim_type"]], "mthlim (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.mthlim"]], "num_ghost (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.num_ghost"]], "order (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.order"]], "setup() (clawpack.pyclaw.classic.solver.clawsolver method)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.setup"]], "setup() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.setup"]], "source_split (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.source_split"]], "step() (clawpack.pyclaw.classic.solver.clawsolver method)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.step"]], "step() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.step"]], "step_hyperbolic() (clawpack.pyclaw.classic.solver.clawsolver method)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.step_hyperbolic"]], "step_source (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.step_source"]], "tfluct (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.tfluct"]], "tfluct_solver (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.tfluct_solver"]], "time_integrator (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.time_integrator"]], "update_saved_values() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.update_saved_values"]], "verbosity (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.verbosity"]], "weno_order (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.weno_order"]], "f (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.F"]], "f (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.F"]], "state (class in clawpack.petclaw.state)": [[106, "clawpack.petclaw.state.State"]], "state (class in clawpack.pyclaw.state)": [[106, "clawpack.pyclaw.state.State"]], "aux (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.aux"]], "fset (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.fset"]], "gauge_data (clawpack.petclaw.state.state attribute)": [[106, "clawpack.petclaw.state.State.gauge_data"]], "gauge_data (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.gauge_data"]], "get_aux_global() (clawpack.petclaw.state.state method)": [[106, "clawpack.petclaw.state.State.get_aux_global"]], "get_aux_global() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.get_aux_global"]], "get_auxbc_from_aux() (clawpack.petclaw.state.state method)": [[106, "clawpack.petclaw.state.State.get_auxbc_from_aux"]], "get_auxbc_from_aux() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.get_auxbc_from_aux"]], "get_q_global() (clawpack.petclaw.state.state method)": [[106, "clawpack.petclaw.state.State.get_q_global"]], "get_q_global() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.get_q_global"]], "get_qbc_from_q() (clawpack.petclaw.state.state method)": [[106, "clawpack.petclaw.state.State.get_qbc_from_q"]], "get_qbc_from_q() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.get_qbc_from_q"]], "is_valid() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.is_valid"]], "keep_gauges (clawpack.petclaw.state.state attribute)": [[106, "clawpack.petclaw.state.State.keep_gauges"]], "keep_gauges (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.keep_gauges"]], "mf (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.mF"]], "mf (clawpack.pyclaw.state.state property)": [[106, "clawpack.pyclaw.state.State.mF"]], "mp (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.mp"]], "mp (clawpack.pyclaw.state.state property)": [[106, "clawpack.pyclaw.state.State.mp"]], "num_aux (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.num_aux"]], "num_aux (clawpack.pyclaw.state.state property)": [[106, "clawpack.pyclaw.state.State.num_aux"]], "num_eqn (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.num_eqn"]], "num_eqn (clawpack.pyclaw.state.state property)": [[106, "clawpack.pyclaw.state.State.num_eqn"]], "p (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.p"]], "p (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.p"]], "problem_data (clawpack.petclaw.state.state attribute)": [[106, "clawpack.petclaw.state.State.problem_data"]], "problem_data (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.problem_data"]], "q (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.q"]], "set_aux_from_auxbc() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.set_aux_from_auxbc"]], "set_cparam() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.set_cparam"]], "set_num_ghost() (clawpack.petclaw.state.state method)": [[106, "clawpack.petclaw.state.State.set_num_ghost"]], "set_num_ghost() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.set_num_ghost"]], "set_q_from_qbc() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.set_q_from_qbc"]], "t (clawpack.petclaw.state.state attribute)": [[106, "clawpack.petclaw.state.State.t"]], "t (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.t"]], "framecounter (class in clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.FrameCounter"]], "verifyerror": [[109, "clawpack.pyclaw.util.VerifyError"]], "add_parent_doc() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.add_parent_doc"]], "check_diff() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.check_diff"]], "clawpack.pyclaw.util": [[109, "module-clawpack.pyclaw.util"]], "compile_library() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.compile_library"]], "construct_function_handle() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.construct_function_handle"]], "convert_fort_double_to_float() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.convert_fort_double_to_float"]], "gen_variants() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.gen_variants"]], "get_counter() (clawpack.pyclaw.util.framecounter method)": [[109, "clawpack.pyclaw.util.FrameCounter.get_counter"]], "increment() (clawpack.pyclaw.util.framecounter method)": [[109, "clawpack.pyclaw.util.FrameCounter.increment"]], "read_data_line() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.read_data_line"]], "reset_counter() (clawpack.pyclaw.util.framecounter method)": [[109, "clawpack.pyclaw.util.FrameCounter.reset_counter"]], "run_app_from_main() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.run_app_from_main"]], "run_serialized() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.run_serialized"]], "set_counter() (clawpack.pyclaw.util.framecounter method)": [[109, "clawpack.pyclaw.util.FrameCounter.set_counter"]], "test_app() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.test_app"]], "nodataerror": [[158, "clawpack.geoclaw.surge.storm.NoDataError"]], "storm (class in clawpack.geoclaw.surge.storm)": [[158, "clawpack.geoclaw.surge.storm.Storm"]], "available_formats() (in module clawpack.geoclaw.surge.storm)": [[158, "clawpack.geoclaw.surge.storm.available_formats"]], "available_models() (in module clawpack.geoclaw.surge.storm)": [[158, "clawpack.geoclaw.surge.storm.available_models"]], "category() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.category"]], "clawpack.geoclaw.surge.storm": [[158, "module-clawpack.geoclaw.surge.storm"]], "fill_rad_w_other_source() (in module clawpack.geoclaw.surge.storm)": [[158, "clawpack.geoclaw.surge.storm.fill_rad_w_other_source"]], "make_multi_structure() (in module clawpack.geoclaw.surge.storm)": [[158, "clawpack.geoclaw.surge.storm.make_multi_structure"]], "read() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read"]], "read_atcf() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_atcf"]], "read_geoclaw() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_geoclaw"]], "read_hurdat() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_hurdat"]], "read_ibtracs() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_ibtracs"]], "read_imd() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_imd"]], "read_jma() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_jma"]], "read_tcvitals() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_tcvitals"]], "write() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write"]], "write_atcf() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_atcf"]], "write_geoclaw() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_geoclaw"]], "write_hurdat() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_hurdat"]], "write_imd() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_imd"]], "write_jma() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_jma"]], "write_tcvitals() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_tcvitals"]], "topography (class in clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.Topography"]], "x (clawpack.geoclaw.topotools.topography property)": [[164, "clawpack.geoclaw.topotools.Topography.X"], [164, "clawpack.geoclaw.topotools.Topography.x"]], "y (clawpack.geoclaw.topotools.topography property)": [[164, "clawpack.geoclaw.topotools.Topography.Y"], [164, "clawpack.geoclaw.topotools.Topography.y"]], "z (clawpack.geoclaw.topotools.topography property)": [[164, "clawpack.geoclaw.topotools.Topography.Z"], [164, "clawpack.geoclaw.topotools.Topography.z"]], "clawpack.geoclaw.topotools": [[164, "module-clawpack.geoclaw.topotools"]], "create_topo_func() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.create_topo_func"]], "crop() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.crop"]], "delta (clawpack.geoclaw.topotools.topography property)": [[164, "clawpack.geoclaw.topotools.Topography.delta"]], "determine_topo_type() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.determine_topo_type"]], "extent (clawpack.geoclaw.topotools.topography property)": [[164, "clawpack.geoclaw.topotools.Topography.extent"]], "fetch_topo_url() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.fetch_topo_url"]], "generate_2d_coordinates() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.generate_2d_coordinates"]], "generate_2d_topo() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.generate_2d_topo"]], "get_topo() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.get_topo"]], "in_poly() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.in_poly"]], "interp_unstructured() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.interp_unstructured"]], "make_shoreline_xy() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.make_shoreline_xy"]], "plot() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.plot"]], "read() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.read"]], "read_header() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.read_header"]], "read_netcdf() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.read_netcdf"]], "replace_no_data_values() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.replace_no_data_values"]], "replace_values() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.replace_values"]], "set_xyz() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.set_xyZ"]], "smooth_data() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.smooth_data"]], "swapheader() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.swapheader"]], "topo1writer() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.topo1writer"]], "topo2writer() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.topo2writer"]], "topo3writer() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.topo3writer"]], "write() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.write"]]}})
\ No newline at end of file
+Search.setIndex({"docnames": ["ClawPlotAxes", "ClawPlotData", "ClawPlotFigure", "ClawPlotItem", "about", "adjoint", "amr_algorithm", "amrclaw", "amrclaw1d", "amrclaw_doxygen", "amrclaw_flowcharts", "application_documentation", "apps", "aws", "b4run", "b4step_defaults", "bc", "biblio", "bouss1d", "bouss2d", "changes_to_master", "claw43to46", "claw46to50", "claw4x", "clawpack5", "clawpack_components", "community", "contents", "contribute_apps", "current_data", "developers", "docker_image", "dtopotools_module", "f77_vs_f90", "fgmax", "fgmax_tools_module", "fgout", "fgout_tools_module", "first_run", "first_run_fortran", "first_run_pyclaw", "flagregions", "force_dry", "fortran", "fortran_compilers", "fvmbook", "galleries", "gauges", "geoclaw", "geoclaw1d", "geoclaw_started", "geoclaw_util_module", "geohints", "geoplot", "git_versions", "googleearth_plotting", "gpu", "grid_registration", "howto_doc", "howto_release", "installing", "installing_fortcodes", "installing_pip", "kmltools_module", "lagrangian_gauges", "license", "makefiles", "makefiles_library", "manning", "mapc2p", "marching_front", "matlab_plotting", "nearshore_interp", "netcdf", "newapp", "okada", "openmp", "output_styles", "packages", "photos", "plotexamples", "plotting", "plotting_faq", "plotting_geoclaw", "plotting_python", "prereqs", "pyclaw/about", "pyclaw/basics", "pyclaw/classes", "pyclaw/clawpack_and_pyclaw", "pyclaw/cloud", "pyclaw/controller", "pyclaw/evolve/limiters", "pyclaw/examples", "pyclaw/geometry", "pyclaw/going_further", "pyclaw/index", "pyclaw/io", "pyclaw/output", "pyclaw/parallel", "pyclaw/plotting", "pyclaw/problem", "pyclaw/rp", "pyclaw/solution", "pyclaw/solvers", "pyclaw/started", "pyclaw/state", "pyclaw/troubleshooting", "pyclaw/tutorial", "pyclaw/util", "python", "python_path", "qinit_defaults", "quick_surge", "quick_tsunami", "refinement", "regression", "release_5_0_0", "release_5_10_0", "release_5_1_0", "release_5_2_0", "release_5_2_1", "release_5_2_2", "release_5_3_0", "release_5_3_1", "release_5_4_0", "release_5_4_1", "release_5_5_0", "release_5_6_0", "release_5_6_1", "release_5_7_0", "release_5_7_1", "release_5_8_0", "release_5_8_1", "release_5_8_2", "release_5_9_0", "release_5_9_1", "release_5_9_2", "releases", "restart", "riemann", "riemann/Shallow_water_Riemann_solvers", "ruled_rectangles", "sealevel", "set_eta_init", "setaux_defaults", "setenv", "setplot", "setrun", "setrun_amrclaw", "setrun_amrclaw_sample", "setrun_geoclaw", "setrun_sample", "sharing", "sphere_source", "sphinxdoc", "src1d_defaults", "src_defaults", "storm_module", "surgedata", "testing", "timing", "topo", "topotools", "topotools_module", "trouble", "tsunamidata", "user_routines", "visit_plotting", "vm", "wp_algorithms"], "filenames": ["ClawPlotAxes.rst", "ClawPlotData.rst", "ClawPlotFigure.rst", "ClawPlotItem.rst", "about.rst", "adjoint.rst", "amr_algorithm.rst", "amrclaw.rst", "amrclaw1d.rst", "amrclaw_doxygen.rst", "amrclaw_flowcharts.rst", "application_documentation.rst", "apps.rst", "aws.rst", "b4run.rst", "b4step_defaults.rst", "bc.rst", "biblio.rst", "bouss1d.rst", "bouss2d.rst", "changes_to_master.rst", "claw43to46.rst", "claw46to50.rst", "claw4x.rst", "clawpack5.rst", "clawpack_components.rst", "community.rst", "contents.rst", "contribute_apps.rst", "current_data.rst", "developers.rst", "docker_image.rst", "dtopotools_module.rst", "f77_vs_f90.rst", "fgmax.rst", "fgmax_tools_module.rst", "fgout.rst", "fgout_tools_module.rst", "first_run.rst", "first_run_fortran.rst", "first_run_pyclaw.rst", "flagregions.rst", "force_dry.rst", "fortran.rst", "fortran_compilers.rst", "fvmbook.rst", "galleries.rst", "gauges.rst", "geoclaw.rst", "geoclaw1d.rst", "geoclaw_started.rst", "geoclaw_util_module.rst", "geohints.rst", "geoplot.rst", "git_versions.rst", "googleearth_plotting.rst", "gpu.rst", "grid_registration.rst", "howto_doc.rst", "howto_release.rst", "installing.rst", "installing_fortcodes.rst", "installing_pip.rst", "kmltools_module.rst", "lagrangian_gauges.rst", "license.rst", "makefiles.rst", "makefiles_library.rst", "manning.rst", "mapc2p.rst", "marching_front.rst", "matlab_plotting.rst", "nearshore_interp.rst", "netcdf.rst", "newapp.rst", "okada.rst", "openmp.rst", "output_styles.rst", "packages.rst", "photos.rst", "plotexamples.rst", "plotting.rst", "plotting_faq.rst", "plotting_geoclaw.rst", "plotting_python.rst", "prereqs.rst", "pyclaw/about.rst", "pyclaw/basics.rst", "pyclaw/classes.rst", "pyclaw/clawpack_and_pyclaw.rst", "pyclaw/cloud.rst", "pyclaw/controller.rst", "pyclaw/evolve/limiters.rst", "pyclaw/examples.rst", "pyclaw/geometry.rst", "pyclaw/going_further.rst", "pyclaw/index.rst", "pyclaw/io.rst", "pyclaw/output.rst", "pyclaw/parallel.rst", "pyclaw/plotting.rst", "pyclaw/problem.rst", "pyclaw/rp.rst", "pyclaw/solution.rst", "pyclaw/solvers.rst", "pyclaw/started.rst", "pyclaw/state.rst", "pyclaw/troubleshooting.rst", "pyclaw/tutorial.rst", "pyclaw/util.rst", "python.rst", "python_path.rst", "qinit_defaults.rst", "quick_surge.rst", "quick_tsunami.rst", "refinement.rst", "regression.rst", "release_5_0_0.rst", "release_5_10_0.rst", "release_5_1_0.rst", "release_5_2_0.rst", "release_5_2_1.rst", "release_5_2_2.rst", "release_5_3_0.rst", "release_5_3_1.rst", "release_5_4_0.rst", "release_5_4_1.rst", "release_5_5_0.rst", "release_5_6_0.rst", "release_5_6_1.rst", "release_5_7_0.rst", "release_5_7_1.rst", "release_5_8_0.rst", "release_5_8_1.rst", "release_5_8_2.rst", "release_5_9_0.rst", "release_5_9_1.rst", "release_5_9_2.rst", "releases.rst", "restart.rst", "riemann.rst", "riemann/Shallow_water_Riemann_solvers.rst", "ruled_rectangles.rst", "sealevel.rst", "set_eta_init.rst", "setaux_defaults.rst", "setenv.rst", "setplot.rst", "setrun.rst", "setrun_amrclaw.rst", "setrun_amrclaw_sample.rst", "setrun_geoclaw.rst", "setrun_sample.rst", "sharing.rst", "sphere_source.rst", "sphinxdoc.rst", "src1d_defaults.rst", "src_defaults.rst", "storm_module.rst", "surgedata.rst", "testing.rst", "timing.rst", "topo.rst", "topotools.rst", "topotools_module.rst", "trouble.rst", "tsunamidata.rst", "user_routines.rst", "visit_plotting.rst", "vm.rst", "wp_algorithms.rst"], "titles": ["ClawPlotAxes", "ClawPlotData", "ClawPlotFigure", "ClawPlotItem", "About this software", "Guiding AMR with adjoint flagging", "Adaptive mesh refinement (AMR) algorithms", "AMRClaw Description and Detailed Contents", "AMRClaw for 1d problems", "Doxygen documentation of AMRClaw", "AMRClaw Flowcharts", "Application documentation", "Clawpack Applications repository", "Amazon Web Services EC2 Clawpack AMI", "b4run function", "b4step default routines", "Boundary conditions", "Bibliography", "Boussinesq solvers in One Space Dimension", "Boussinesq solvers in Two Space Dimensions", "Changes to master since v5.10.0", "Converting from Clawpack 4.3 to 4.6", "Converting from Clawpack 4.6 to 5.0", "Clawpack 4.x links", "Changes in Clawpack 5.0", "Clawpack components", "Clawpack Community", "Full Table of Contents", "Contributing examples and applications", "current_data", "Developers\u2019 Guide", "Docker for Clawpack", "dtopotools module for moving topography", "Fortran 77 vs. Fortran 90 files", "Fixed grid monitoring (fgmax)", "fgmax_tools module for working with fgmax grids", "Fixed grid output (fgout)", "fgout_tools module for working with fgout grids", "Running an example", "Testing your Fortran installation and running an example", "Testing a PyClaw installation and running an example", "Specifying flagregions for adaptive refinement", "Force Cells to be Dry Initially", "Fortran version", "Fortran Compilers", "Examples from the book FVMHP", "Clawpack Gallery", "Gauges", "GeoClaw Description and Detailed Contents", "GeoClaw in One Space Dimension", "Getting started with GeoClaw", "geoclaw.util module of utility functions", "Cautionary Hints on using GeoClaw", "GeoClaw plotting tools", "Keeping track of repository versions with Git", "Visualizing GeoClaw results in Google Earth", "Using the GPU version of Clawpack", "Grid registration", "Guide for updating this documentation", "Guide for doing a Clawpack release", "Installing Clawpack", "Options for installing Clawpack Fortran codes", "pip install instructions", "kmltools module of utility functions", "Lagrangian gauges for particle tracking", "License", "Clawpack Makefiles", "Library routines in Makefiles", "Manning friction term", "The mapc2p function", "Marching Front algorithm", "Plotting using Matlab", "Nearshore interpolation", "Using NetCDF output", "Creating a new application directory", "Earthquake sources: Fault slip and the Okada model", "Using OpenMP", "Output data sytles and formats", "Which Clawpack solver should I use?", "Clawpack Community Photos", "Plotting examples", "Plotting with Visclaw", "Plotting hints and FAQ", "Plotting routines for GeoClaw", "Plotting options in Python", "Installation Prerequisites", "About PyClaw", "PyClaw Basics", "Understanding Pyclaw Classes", "Porting a problem from Clawpack 4.6.x to PyClaw", "Running PyClaw in the cloud", "Pyclaw Controller Class", "Pyclaw Limiters", "Working with PyClaw\u2019s built-in examples", "PyClaw Geometry", "Going Further", "PyClaw", "Pyclaw Input/Output Package", "PyClaw output", "Running in parallel", "Plotting PyClaw results", "Setting up your own problem", "Riemann Solver Package", "PyClaw Solutions", "Using PyClaw\u2019s solvers: Classic and SharpClaw", "Installing PyClaw", "PyClaw State", "Troubleshooting", "PyClaw tutorial: Solve the acoustics equations", "Pyclaw Utility Module", "Python Hints", "Python path", "qinit default routines", "Quick start guide for storm surge modeling", "Quick start guide for tsunami modeling", "AMR refinement criteria", "Regression testing", "v5.0.0 release notes", "v5.10.0 release notes", "v5.1.0 release notes", "v5.2.0 release notes", "v5.2.1 release notes", "v5.2.2 release notes", "v5.3.0 release notes", "v5.3.1 release notes", "v5.4.0 release notes", "v5.4.1 release notes", "v5.5.0 release notes", "v5.6.0 release notes", "v5.6.1 release notes", "v5.7.0 release notes", "v5.7.1 release notes", "v5.8.0 release notes", "v5.8.1 release notes", "v5.8.2 release notes", "v5.9.0 release notes", "v5.9.1 release notes", "v5.9.2 release notes", "Releases of Clawpack and release notes", "Checkpointing and restarting", "Riemann solvers", "Shallow water Riemann solvers in Clawpack", "Ruled Rectangles", "Setting sea_level", "Set Eta Init \u2013 spatially varying initial surface elevation", "setaux default routines", "Set environment variables", "Using setplot.py to specify the desired plots", "Specifying classic run-time parameters in setrun.py", "Specifying AMRClaw run-time parameters in setrun.py", "Sample setrun.py module for AMRClaw", "Specifying GeoClaw parameters in setrun.py", "Sample setrun.py module for classic Clawpack", "Saving and sharing results", "Source terms for shallow water on the sphere", "Compiling the Sphinx documentation locally", "src1d default routines", "src default routines", "Storm Specification Class and Tools", "Sources for Storm Surge Data", "Testing your installation", "Timing Statistics", "Topography data", "Python tools for working with topo and dtopo", "topotools module for working with topography data", "Troubleshooting", "Some sources of tsunami data", "User files required for the Fortran code", "Plotting with VisIt", "Clawpack Virtual Machine", "Wave-propagation algorithms"], "terms": {"For": [0, 1, 2, 3, 5, 7, 8, 9, 10, 12, 13, 16, 17, 18, 19, 21, 24, 26, 27, 28, 29, 30, 31, 32, 34, 36, 38, 40, 41, 42, 44, 45, 47, 49, 51, 52, 53, 55, 57, 58, 59, 66, 67, 70, 71, 72, 75, 76, 77, 81, 82, 84, 85, 88, 89, 93, 94, 96, 97, 98, 99, 101, 104, 105, 109, 110, 111, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 138, 140, 141, 142, 143, 144, 147, 148, 149, 150, 151, 152, 155, 158, 159, 161, 162, 164, 166, 167, 170], "usag": [0, 1, 2, 3, 13, 19, 48, 49, 51, 55, 60, 97, 127, 158, 164], "see": [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 12, 13, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 30, 31, 32, 34, 36, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 55, 56, 57, 58, 59, 60, 61, 62, 64, 65, 66, 67, 68, 70, 71, 72, 74, 75, 76, 77, 80, 81, 82, 83, 84, 85, 86, 89, 91, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 146, 147, 148, 149, 150, 151, 153, 155, 156, 157, 158, 160, 161, 162, 164, 165, 166, 167, 168, 169, 170], "us": [0, 1, 2, 3, 4, 6, 7, 8, 9, 10, 11, 12, 14, 16, 17, 21, 22, 23, 24, 25, 26, 28, 29, 30, 32, 34, 35, 37, 38, 39, 40, 42, 43, 44, 45, 47, 48, 49, 50, 51, 53, 54, 55, 57, 58, 59, 60, 61, 63, 65, 66, 68, 70, 72, 74, 75, 77, 80, 81, 82, 83, 84, 85, 86, 88, 89, 90, 91, 92, 93, 94, 95, 96, 97, 99, 100, 102, 103, 105, 106, 108, 109, 110, 111, 112, 113, 115, 116, 118, 120, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 135, 136, 137, 138, 139, 142, 143, 146, 148, 149, 150, 151, 152, 154, 156, 157, 158, 161, 162, 164, 166, 168, 169, 170], "setplot": [0, 1, 2, 3, 7, 21, 22, 24, 27, 45, 47, 48, 49, 80, 81, 100, 101, 109, 118, 125, 135, 136, 165, 168], "py": [0, 1, 2, 3, 5, 6, 7, 8, 11, 13, 14, 16, 21, 22, 27, 30, 32, 34, 35, 37, 38, 39, 40, 41, 42, 43, 45, 47, 48, 49, 50, 51, 52, 53, 54, 55, 58, 59, 63, 64, 66, 68, 70, 75, 77, 78, 80, 81, 83, 84, 89, 93, 96, 99, 100, 101, 105, 113, 115, 116, 118, 119, 120, 121, 122, 123, 124, 125, 127, 128, 129, 130, 131, 132, 135, 136, 137, 139, 140, 141, 143, 144, 146, 154, 158, 162, 164, 165, 167, 168], "specifi": [0, 1, 2, 3, 4, 5, 6, 7, 15, 16, 18, 19, 22, 24, 27, 29, 30, 31, 32, 34, 35, 36, 37, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 54, 55, 57, 63, 66, 67, 68, 70, 71, 72, 75, 76, 77, 78, 80, 81, 83, 88, 91, 94, 97, 98, 101, 103, 104, 107, 109, 111, 112, 113, 116, 119, 122, 123, 124, 125, 126, 127, 130, 132, 135, 136, 137, 139, 140, 142, 143, 144, 145, 150, 152, 153, 156, 157, 158, 159, 161, 162, 164, 165, 166, 168, 170], "desir": [0, 1, 2, 3, 6, 7, 16, 19, 24, 27, 28, 32, 34, 35, 36, 37, 42, 45, 47, 49, 59, 62, 63, 64, 70, 72, 75, 77, 80, 81, 82, 84, 88, 89, 91, 98, 103, 104, 112, 125, 127, 130, 144, 146, 148, 149, 150, 151, 152, 158, 162, 164, 165], "exampl": [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 13, 14, 16, 18, 22, 24, 26, 29, 30, 31, 32, 37, 41, 43, 44, 46, 48, 49, 51, 57, 58, 59, 60, 61, 63, 64, 66, 67, 68, 72, 75, 76, 77, 81, 82, 84, 86, 87, 88, 89, 91, 94, 95, 97, 98, 101, 102, 103, 104, 105, 108, 109, 110, 111, 113, 114, 115, 116, 118, 119, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 135, 136, 137, 139, 140, 141, 143, 144, 146, 147, 148, 149, 150, 151, 152, 153, 154, 158, 160, 161, 162, 164, 165, 166, 167], "object": [0, 1, 2, 3, 5, 18, 24, 29, 32, 34, 36, 37, 41, 47, 55, 63, 70, 75, 81, 82, 84, 88, 89, 91, 97, 98, 99, 101, 103, 106, 107, 108, 109, 119, 128, 136, 137, 139, 140, 148, 149, 150, 151, 152, 158, 164], "thi": [0, 1, 2, 3, 5, 6, 8, 10, 11, 12, 13, 14, 16, 17, 18, 19, 20, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 54, 55, 56, 57, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 70, 71, 72, 73, 75, 76, 77, 81, 82, 84, 85, 86, 88, 89, 91, 92, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 113, 114, 115, 116, 118, 119, 120, 122, 123, 124, 125, 126, 127, 128, 129, 130, 132, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 158, 159, 160, 161, 162, 164, 165, 166, 167, 168, 169, 170], "class": [0, 1, 2, 3, 5, 27, 32, 34, 35, 36, 37, 41, 55, 63, 75, 82, 84, 89, 94, 96, 101, 103, 104, 106, 108, 109, 110, 128, 130, 139, 142, 147, 148, 149, 150, 151, 152, 164], "ar": [0, 1, 2, 3, 4, 5, 6, 7, 9, 10, 12, 13, 15, 16, 18, 19, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 52, 53, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 70, 71, 75, 76, 77, 78, 81, 83, 84, 85, 86, 88, 89, 91, 92, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 119, 120, 121, 122, 123, 124, 125, 126, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 147, 148, 149, 150, 151, 152, 154, 155, 156, 157, 158, 159, 160, 161, 162, 164, 165, 167, 170], "usual": [0, 2, 3, 5, 6, 19, 32, 36, 42, 47, 50, 55, 63, 66, 75, 77, 93, 94, 99, 101, 102, 104, 109, 113, 115, 125, 140, 148, 149, 150, 151, 152, 165, 167], "creat": [0, 1, 2, 3, 5, 6, 7, 21, 26, 27, 30, 32, 34, 35, 36, 37, 38, 39, 41, 43, 45, 47, 48, 49, 50, 54, 56, 58, 62, 63, 66, 75, 77, 81, 82, 84, 89, 90, 93, 94, 96, 97, 100, 103, 106, 107, 108, 109, 115, 116, 118, 119, 123, 124, 125, 127, 128, 129, 132, 135, 142, 147, 148, 149, 150, 153, 155, 158, 164, 166, 167, 168], "new_plotax": [0, 2, 47, 55, 82, 147], "clawplotfigur": [0, 1, 55, 82, 136, 147], "The": [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 20, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 32, 34, 36, 37, 38, 39, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 56, 57, 58, 59, 61, 62, 63, 64, 65, 66, 67, 68, 72, 74, 75, 76, 77, 78, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 91, 92, 94, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 109, 110, 111, 113, 115, 116, 118, 119, 120, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 160, 161, 162, 164, 165, 166, 167, 168, 169, 170], "follow": [0, 2, 3, 4, 5, 6, 13, 16, 18, 19, 20, 21, 25, 26, 30, 32, 34, 38, 39, 40, 42, 47, 50, 55, 57, 58, 59, 60, 62, 65, 70, 71, 75, 77, 82, 83, 85, 86, 88, 89, 90, 93, 94, 97, 98, 99, 101, 102, 103, 105, 106, 108, 109, 111, 116, 118, 127, 132, 135, 136, 137, 139, 140, 142, 146, 147, 148, 149, 151, 158, 160, 161, 162, 165, 167, 169], "can": [0, 2, 3, 4, 5, 6, 7, 8, 9, 11, 12, 13, 14, 15, 16, 18, 19, 21, 22, 24, 26, 28, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 66, 67, 68, 70, 71, 72, 74, 75, 76, 77, 78, 80, 81, 82, 83, 84, 86, 88, 89, 90, 92, 93, 94, 96, 97, 98, 99, 100, 101, 103, 104, 105, 106, 107, 108, 109, 111, 112, 113, 115, 116, 118, 119, 120, 123, 124, 125, 126, 127, 130, 131, 132, 135, 137, 138, 139, 140, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 156, 157, 158, 160, 162, 164, 165, 166, 167, 168, 170], "set": [0, 1, 2, 3, 5, 6, 8, 13, 14, 15, 16, 18, 19, 24, 27, 29, 30, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 47, 48, 49, 51, 52, 53, 54, 55, 58, 59, 61, 62, 63, 64, 66, 67, 70, 72, 74, 75, 76, 77, 78, 80, 81, 88, 89, 91, 93, 94, 95, 96, 97, 98, 99, 102, 103, 104, 105, 106, 107, 108, 109, 111, 112, 115, 116, 118, 119, 120, 123, 124, 125, 127, 129, 130, 132, 135, 136, 137, 139, 140, 141, 142, 145, 147, 148, 149, 150, 151, 152, 153, 154, 158, 159, 162, 164, 166, 167, 170], "user": [0, 2, 3, 4, 5, 6, 12, 13, 21, 22, 24, 25, 27, 28, 29, 30, 31, 34, 36, 37, 44, 49, 52, 55, 60, 62, 63, 68, 71, 75, 77, 82, 89, 90, 93, 97, 99, 107, 109, 110, 111, 115, 123, 125, 127, 129, 136, 137, 140, 148, 150, 151, 152, 155, 164, 170], "name": [0, 1, 2, 3, 5, 7, 11, 12, 13, 18, 19, 22, 24, 30, 31, 32, 35, 36, 37, 38, 39, 41, 42, 43, 47, 49, 55, 58, 59, 63, 65, 71, 82, 84, 86, 89, 91, 93, 94, 97, 98, 102, 103, 108, 109, 111, 118, 124, 127, 132, 139, 140, 142, 147, 148, 149, 150, 151, 152, 158, 164, 167, 168], "str": [0, 1, 3, 32, 63, 97, 148, 149, 158, 164], "axescmd": [0, 84], "command": [0, 1, 2, 3, 11, 13, 14, 19, 30, 43, 54, 55, 56, 59, 61, 62, 66, 74, 81, 82, 85, 88, 89, 91, 96, 99, 100, 104, 108, 109, 110, 111, 116, 136, 140, 146, 147, 148, 149, 162, 164], "ax": [0, 1, 2, 29, 32, 47, 55, 63, 71, 81, 82, 84, 147, 164], "subplot": [0, 32, 70, 84, 142], "1": [0, 2, 3, 4, 5, 6, 7, 8, 9, 13, 14, 15, 16, 17, 18, 19, 24, 32, 34, 35, 36, 38, 39, 40, 41, 47, 48, 49, 51, 52, 53, 55, 57, 58, 59, 62, 63, 64, 66, 71, 75, 77, 82, 84, 88, 89, 91, 92, 93, 94, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 115, 120, 122, 123, 125, 127, 128, 130, 132, 134, 138, 139, 140, 141, 142, 143, 145, 147, 148, 149, 150, 151, 152, 154, 158, 161, 162, 164, 165, 166, 167, 170], "singl": [0, 1, 2, 3, 5, 6, 16, 21, 24, 25, 29, 30, 32, 34, 36, 37, 42, 47, 49, 50, 55, 57, 58, 59, 63, 64, 66, 71, 75, 76, 77, 78, 88, 94, 97, 98, 103, 109, 116, 122, 123, 125, 138, 140, 144, 148, 149, 150, 151, 162, 164, 166, 167], "fill": [0, 3, 4, 6, 16, 26, 55, 70, 94, 97, 106, 113, 125, 144, 148, 158, 161, 164, 167], "figur": [0, 1, 2, 4, 13, 32, 38, 39, 42, 45, 47, 57, 63, 70, 71, 81, 84, 103, 111, 118, 135, 140, 142, 147, 164], "2": [0, 3, 4, 6, 7, 15, 16, 17, 18, 19, 24, 32, 34, 35, 36, 37, 41, 42, 47, 49, 51, 55, 57, 63, 64, 68, 70, 71, 72, 75, 76, 77, 82, 84, 85, 88, 89, 91, 92, 94, 97, 98, 99, 101, 102, 103, 104, 105, 106, 108, 109, 111, 115, 116, 118, 119, 123, 124, 125, 127, 128, 129, 130, 132, 135, 136, 138, 139, 140, 142, 145, 148, 149, 150, 151, 152, 154, 158, 161, 162, 164, 167, 170], "top": [0, 1, 3, 11, 25, 31, 32, 36, 55, 58, 59, 61, 62, 75, 82, 96, 101, 102, 111, 116, 139, 146], "half": [0, 16, 17, 75, 77, 104, 135, 148, 167], "0": [0, 2, 3, 4, 5, 6, 16, 18, 19, 21, 27, 29, 30, 32, 34, 36, 37, 41, 42, 47, 48, 49, 51, 52, 55, 56, 57, 58, 59, 61, 62, 63, 64, 66, 67, 68, 70, 71, 72, 75, 77, 82, 84, 85, 88, 89, 91, 92, 94, 97, 98, 99, 101, 102, 103, 104, 105, 106, 108, 109, 110, 111, 115, 121, 122, 124, 126, 129, 131, 133, 134, 136, 137, 138, 139, 141, 142, 143, 144, 148, 149, 150, 151, 152, 154, 161, 162, 164, 166, 167, 169, 170], "8": [0, 34, 36, 42, 47, 55, 58, 63, 70, 77, 82, 94, 107, 109, 117, 118, 129, 135, 138, 140, 142, 147, 148, 149, 151, 152], "tall": 0, "skinni": 0, "axi": [0, 32, 42, 49, 53, 55, 70, 71, 82, 94, 136, 142], "matplotlib": [0, 2, 3, 13, 32, 42, 53, 55, 70, 81, 82, 85, 87, 90, 110, 131, 141, 147, 164, 165], "document": [0, 1, 2, 3, 6, 7, 19, 20, 23, 24, 25, 26, 27, 30, 31, 34, 48, 52, 57, 62, 65, 75, 81, 82, 83, 84, 86, 92, 94, 97, 98, 99, 100, 104, 106, 109, 111, 118, 120, 133, 134, 135, 136, 137, 138, 147, 150, 154, 168, 169], "show": [0, 2, 3, 9, 10, 12, 14, 30, 32, 38, 39, 42, 46, 47, 55, 58, 59, 63, 66, 70, 71, 84, 94, 104, 108, 111, 116, 118, 123, 133, 134, 135, 142, 164, 165, 167], "bool": [0, 1, 2, 3, 51, 63, 91, 97, 102, 103, 104, 106, 109, 151, 158, 164], "If": [0, 1, 2, 3, 4, 5, 6, 12, 13, 15, 16, 18, 19, 20, 21, 22, 24, 25, 26, 27, 29, 30, 31, 32, 34, 36, 37, 38, 39, 40, 42, 43, 44, 47, 49, 51, 55, 57, 58, 59, 60, 61, 62, 63, 64, 66, 67, 68, 70, 71, 72, 75, 76, 77, 78, 80, 81, 82, 84, 85, 86, 88, 93, 94, 96, 97, 98, 99, 101, 103, 104, 105, 106, 107, 109, 111, 113, 114, 115, 116, 118, 125, 126, 127, 128, 129, 130, 132, 135, 136, 137, 139, 140, 141, 142, 143, 144, 145, 146, 148, 149, 150, 151, 152, 156, 157, 158, 160, 162, 164, 165, 167, 170], "fals": [0, 1, 2, 3, 5, 32, 37, 42, 52, 53, 54, 55, 63, 70, 77, 91, 94, 97, 102, 103, 104, 106, 109, 124, 125, 130, 135, 139, 141, 148, 149, 150, 151, 152, 158, 164], "suppress": [0, 2, 3, 30, 55, 63, 124, 126, 148, 149], "all": [0, 1, 4, 6, 11, 12, 13, 16, 19, 22, 24, 25, 27, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 42, 43, 44, 47, 48, 51, 52, 54, 55, 57, 58, 59, 60, 61, 63, 64, 65, 66, 67, 71, 72, 74, 75, 76, 77, 78, 81, 82, 84, 85, 86, 88, 91, 92, 94, 96, 97, 98, 99, 101, 102, 103, 104, 106, 109, 110, 111, 114, 115, 116, 118, 119, 120, 123, 124, 125, 127, 130, 132, 138, 139, 140, 141, 142, 144, 147, 148, 149, 150, 151, 152, 153, 159, 160, 161, 162, 164, 165, 167], "item": [0, 1, 3, 71, 81, 84, 109, 132, 137, 147], "titl": [0, 1, 4, 17, 26, 42, 47, 55, 63, 70, 81, 96, 125, 136, 142, 164], "appear": [0, 1, 3, 5, 8, 13, 20, 25, 30, 34, 36, 47, 48, 49, 55, 58, 63, 66, 69, 82, 98, 103, 106, 118, 125, 132, 135, 136, 137, 151, 153, 162], "default": [0, 1, 2, 3, 13, 18, 19, 24, 30, 32, 34, 36, 37, 44, 47, 48, 51, 53, 54, 55, 57, 62, 63, 64, 66, 67, 71, 72, 75, 76, 77, 82, 84, 88, 91, 93, 94, 97, 98, 99, 100, 103, 104, 106, 107, 109, 115, 118, 119, 125, 129, 130, 132, 135, 136, 137, 139, 143, 149, 150, 151, 154, 158, 162, 164, 167], "string": [0, 1, 3, 7, 32, 34, 37, 47, 49, 51, 55, 57, 63, 64, 82, 89, 91, 92, 94, 97, 98, 103, 109, 111, 118, 136, 148, 151, 158, 164], "new": [0, 1, 2, 4, 5, 6, 8, 12, 13, 19, 20, 22, 24, 26, 27, 30, 31, 32, 34, 35, 36, 37, 41, 42, 43, 44, 47, 48, 51, 55, 56, 57, 59, 62, 63, 64, 66, 67, 68, 70, 71, 76, 77, 82, 84, 87, 88, 89, 90, 91, 97, 99, 101, 104, 106, 113, 115, 118, 119, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 135, 136, 137, 139, 140, 142, 143, 144, 146, 148, 149, 151, 158, 162, 164, 167], "v5": [0, 5, 14, 30, 31, 34, 36, 41, 45, 47, 56, 58, 59, 61, 62, 67, 77, 103, 110, 111, 115, 138, 139, 143, 144, 149, 151, 154], "9": [0, 34, 36, 37, 42, 47, 55, 63, 64, 77, 82, 94, 97, 103, 118, 125, 138, 139, 142, 148, 151, 152, 154], "note": [0, 1, 3, 4, 5, 13, 15, 16, 19, 22, 24, 26, 27, 30, 32, 34, 35, 36, 37, 41, 42, 43, 44, 47, 49, 51, 55, 56, 57, 58, 59, 60, 61, 62, 63, 66, 67, 70, 75, 76, 82, 84, 89, 92, 93, 94, 96, 97, 99, 101, 102, 105, 106, 109, 110, 112, 115, 139, 140, 142, 143, 144, 145, 147, 148, 149, 150, 151, 152, 156, 157, 158, 159, 161, 162, 164, 166, 167], "now": [0, 5, 6, 7, 13, 20, 22, 24, 26, 28, 30, 31, 32, 34, 35, 36, 37, 41, 42, 44, 54, 57, 58, 59, 68, 70, 72, 75, 77, 82, 88, 89, 94, 96, 97, 98, 99, 100, 101, 103, 104, 105, 108, 113, 115, 116, 118, 119, 120, 123, 124, 125, 126, 127, 129, 130, 132, 133, 135, 136, 137, 143, 147, 149, 153, 162, 169], "includ": [0, 2, 4, 6, 13, 18, 19, 20, 23, 24, 25, 29, 30, 31, 32, 34, 36, 37, 38, 39, 41, 43, 44, 46, 47, 49, 52, 55, 57, 59, 61, 62, 63, 65, 67, 68, 70, 71, 72, 75, 76, 78, 81, 82, 84, 86, 88, 89, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 108, 111, 113, 115, 116, 118, 119, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 140, 141, 142, 146, 148, 150, 151, 153, 154, 155, 158, 159, 161, 162, 164, 167], "h": [0, 16, 17, 18, 19, 34, 36, 37, 42, 47, 48, 49, 52, 55, 56, 63, 68, 72, 102, 115, 123, 130, 136, 141, 143, 144, 151, 162], "m": [0, 4, 17, 18, 22, 24, 30, 32, 47, 48, 51, 55, 56, 58, 59, 63, 70, 71, 75, 77, 89, 115, 122, 136, 140, 142, 151, 164, 167, 170], "": [0, 1, 3, 4, 6, 13, 17, 22, 27, 30, 31, 32, 34, 36, 37, 38, 40, 41, 42, 47, 51, 55, 56, 58, 59, 62, 63, 64, 66, 70, 75, 76, 78, 81, 84, 87, 89, 91, 92, 94, 95, 96, 97, 99, 100, 101, 102, 103, 106, 108, 110, 113, 115, 116, 124, 136, 140, 142, 147, 148, 149, 151, 158, 161, 164, 165, 166, 167], "d": [0, 4, 7, 17, 30, 32, 51, 55, 58, 63, 93, 102, 111, 116, 118, 136, 140], "describ": [0, 3, 4, 5, 6, 7, 13, 14, 16, 18, 19, 21, 28, 30, 32, 33, 34, 36, 38, 39, 41, 42, 47, 49, 50, 51, 52, 55, 56, 58, 59, 61, 63, 64, 66, 67, 70, 71, 75, 77, 78, 81, 82, 83, 94, 96, 97, 103, 109, 113, 115, 116, 118, 125, 128, 129, 135, 140, 142, 143, 147, 148, 149, 151, 158, 159, 162, 164, 166, 167, 170], "further": [0, 6, 16, 19, 27, 34, 36, 44, 52, 63, 66, 71, 96, 110, 115, 116, 135, 136, 149], "below": [0, 3, 6, 13, 15, 16, 18, 19, 20, 24, 26, 30, 31, 32, 34, 36, 42, 47, 48, 49, 55, 56, 58, 59, 62, 63, 68, 71, 75, 84, 86, 88, 90, 98, 102, 108, 111, 112, 115, 116, 118, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 140, 142, 145, 146, 147, 148, 149, 150, 151, 152, 156, 157, 158, 162, 164, 167], "case": [0, 5, 6, 8, 13, 16, 19, 21, 24, 32, 34, 36, 41, 44, 47, 48, 49, 52, 55, 62, 63, 67, 70, 71, 72, 75, 77, 82, 88, 94, 97, 99, 101, 103, 109, 111, 115, 116, 118, 120, 123, 124, 125, 126, 127, 132, 135, 136, 139, 142, 143, 149, 151, 158, 162, 164, 165, 167, 170], "title_with_t": [0, 82], "true": [0, 1, 2, 3, 5, 6, 15, 16, 29, 32, 35, 37, 42, 47, 51, 54, 55, 58, 63, 70, 77, 81, 88, 91, 94, 97, 98, 99, 103, 104, 106, 115, 118, 125, 136, 139, 140, 142, 144, 145, 148, 149, 150, 151, 152, 158, 164], "title_fonts": [0, 136], "float": [0, 3, 32, 34, 37, 47, 51, 63, 91, 94, 97, 102, 106, 109, 148, 149, 151, 152, 158, 164], "fontsiz": [0, 82], "title_kwarg": [0, 136], "ani": [0, 3, 4, 5, 6, 8, 13, 16, 18, 19, 20, 21, 22, 24, 29, 30, 31, 34, 36, 37, 38, 39, 40, 47, 48, 49, 52, 54, 55, 58, 59, 61, 62, 64, 65, 66, 68, 70, 71, 72, 74, 76, 77, 78, 82, 86, 92, 93, 94, 96, 97, 98, 99, 101, 103, 105, 109, 111, 114, 115, 116, 118, 123, 127, 129, 135, 136, 137, 139, 142, 143, 144, 147, 148, 149, 151, 158, 167, 170], "other": [0, 3, 4, 5, 6, 7, 9, 12, 13, 16, 19, 22, 24, 29, 30, 32, 35, 36, 37, 38, 39, 41, 47, 48, 49, 50, 52, 55, 56, 57, 59, 60, 61, 62, 65, 66, 68, 70, 71, 72, 75, 76, 77, 81, 84, 86, 88, 89, 91, 94, 96, 97, 98, 100, 101, 102, 105, 108, 110, 111, 115, 116, 119, 120, 122, 123, 125, 140, 143, 146, 147, 148, 151, 153, 158, 162, 164, 166, 167, 168], "kwarg": [0, 2, 3, 32, 63, 82, 109, 116, 118, 136, 147, 158], "pass": [0, 3, 16, 21, 22, 30, 32, 37, 47, 49, 55, 63, 76, 82, 88, 91, 93, 95, 101, 104, 106, 107, 109, 116, 135, 140, 150, 158, 164, 167], "plt": [0, 63, 141], "e": [0, 1, 3, 5, 8, 12, 13, 14, 16, 22, 24, 29, 30, 31, 32, 34, 36, 37, 44, 47, 49, 50, 51, 54, 55, 57, 58, 59, 60, 61, 62, 63, 64, 66, 67, 68, 70, 71, 74, 75, 76, 77, 78, 81, 84, 85, 89, 94, 96, 97, 99, 100, 101, 102, 103, 104, 107, 109, 110, 111, 115, 116, 118, 123, 124, 125, 126, 127, 135, 136, 137, 140, 142, 143, 144, 146, 147, 148, 149, 150, 151, 152, 158, 162, 164, 165, 166, 167, 170], "g": [0, 1, 3, 4, 5, 8, 12, 13, 14, 16, 17, 22, 24, 29, 30, 31, 32, 34, 36, 37, 44, 47, 49, 50, 54, 55, 58, 59, 60, 61, 62, 63, 64, 66, 68, 70, 71, 74, 75, 76, 77, 78, 81, 84, 85, 96, 99, 100, 101, 102, 103, 104, 110, 111, 115, 116, 118, 123, 124, 125, 126, 127, 135, 136, 137, 140, 142, 143, 146, 147, 148, 149, 150, 151, 152, 162, 164, 165, 167, 170], "color": [0, 2, 3, 32, 42, 55, 63, 70, 71, 81, 136, 142, 147, 164], "format": [0, 1, 3, 5, 13, 14, 27, 32, 35, 38, 39, 42, 47, 48, 50, 52, 53, 55, 57, 63, 64, 66, 70, 71, 73, 75, 81, 82, 88, 91, 97, 98, 100, 101, 103, 109, 113, 124, 125, 127, 130, 132, 135, 136, 148, 151, 158, 159, 164, 166, 168], "like": [0, 12, 13, 18, 26, 30, 31, 42, 44, 55, 58, 59, 63, 64, 71, 84, 89, 91, 94, 97, 98, 99, 102, 103, 104, 106, 110, 111, 116, 124, 140, 142, 147, 161, 162, 165], "time": [0, 1, 5, 6, 7, 10, 14, 16, 18, 19, 22, 24, 27, 29, 30, 32, 34, 36, 37, 38, 39, 41, 42, 43, 44, 45, 47, 48, 49, 50, 51, 52, 55, 57, 58, 63, 64, 71, 72, 75, 76, 77, 78, 82, 86, 88, 91, 92, 96, 97, 98, 104, 106, 108, 115, 116, 118, 119, 122, 124, 125, 127, 128, 129, 132, 135, 136, 137, 139, 140, 142, 144, 146, 147, 150, 152, 158, 162, 165, 166, 170], "t": [0, 1, 4, 5, 12, 13, 17, 19, 26, 29, 30, 31, 32, 34, 36, 37, 42, 47, 49, 58, 59, 62, 64, 66, 67, 70, 71, 75, 76, 77, 82, 84, 88, 89, 92, 93, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 108, 110, 116, 122, 131, 135, 136, 142, 148, 150, 152, 158, 162, 164, 165, 167, 168, 170], "14": [0, 34, 55, 75, 82, 134, 135, 138, 142], "8e": [0, 82], "And": [0, 6, 19, 22, 58, 61], "rather": [0, 5, 6, 18, 22, 24, 30, 31, 34, 36, 37, 42, 58, 59, 62, 66, 67, 68, 74, 75, 94, 99, 101, 104, 111, 112, 115, 118, 123, 124, 125, 127, 129, 130, 132, 135, 136, 138, 139, 142, 147, 148, 149, 158, 159, 162, 164, 167, 170], "than": [0, 3, 5, 6, 13, 16, 18, 19, 22, 24, 30, 31, 32, 34, 36, 37, 42, 47, 49, 55, 58, 59, 62, 63, 64, 66, 67, 68, 70, 72, 74, 75, 77, 81, 84, 88, 89, 91, 94, 97, 98, 99, 101, 102, 104, 109, 111, 115, 116, 118, 119, 122, 123, 124, 125, 126, 127, 129, 130, 132, 135, 136, 138, 139, 142, 143, 144, 147, 148, 149, 151, 158, 159, 161, 162, 164, 167, 170], "8f": [0, 82], "001": [0, 36, 82, 92], "1000": [0, 57, 71, 82, 162], "A": [0, 2, 3, 4, 5, 6, 7, 11, 17, 18, 21, 22, 24, 31, 32, 37, 38, 39, 45, 48, 49, 51, 55, 58, 59, 63, 64, 65, 66, 68, 71, 75, 84, 86, 88, 89, 93, 94, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 108, 115, 116, 119, 125, 127, 128, 129, 130, 132, 135, 136, 140, 141, 148, 151, 158, 164, 170], "differ": [0, 1, 3, 6, 7, 12, 15, 16, 18, 19, 24, 30, 31, 32, 33, 36, 37, 38, 39, 42, 47, 49, 50, 52, 54, 57, 61, 63, 66, 68, 70, 71, 75, 76, 81, 84, 88, 89, 91, 93, 94, 96, 97, 102, 104, 109, 110, 111, 112, 115, 116, 123, 124, 125, 126, 127, 130, 132, 133, 140, 143, 144, 145, 146, 148, 149, 150, 151, 156, 157, 162, 164, 165, 166, 167, 170], "title_t_format": [0, 136], "contain": [0, 1, 3, 5, 12, 13, 18, 19, 22, 25, 27, 28, 32, 34, 35, 36, 37, 38, 39, 40, 43, 45, 46, 47, 48, 49, 51, 53, 54, 55, 56, 57, 58, 59, 63, 64, 66, 67, 70, 71, 77, 78, 82, 84, 85, 88, 89, 91, 92, 94, 96, 97, 99, 101, 102, 103, 104, 106, 108, 109, 110, 111, 115, 116, 119, 120, 127, 128, 138, 140, 142, 147, 148, 151, 153, 158, 162, 164, 165, 167], "i": [0, 1, 2, 3, 4, 5, 6, 7, 8, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 46, 47, 48, 49, 50, 51, 52, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 70, 71, 72, 73, 74, 75, 76, 77, 81, 82, 83, 84, 85, 86, 88, 89, 90, 91, 92, 94, 95, 96, 97, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 122, 123, 124, 125, 126, 127, 128, 129, 130, 132, 134, 135, 136, 137, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 154, 155, 156, 157, 158, 159, 160, 161, 162, 164, 165, 166, 167, 168, 169, 170], "dai": [0, 6, 13, 55, 136, 151], "hour": [0, 13, 36, 55, 63, 136], "minut": [0, 36, 42, 51, 55, 58, 63, 136, 143, 164, 166], "second": [0, 3, 16, 18, 19, 32, 34, 39, 47, 49, 51, 55, 63, 71, 88, 94, 98, 104, 115, 119, 125, 136, 139, 148, 151, 158, 160, 161, 164, 167, 170], "otherwis": [0, 5, 32, 58, 62, 65, 70, 86, 98, 102, 103, 104, 105, 106, 109, 115, 136, 137, 148, 154, 164], "you": [0, 2, 3, 4, 5, 12, 13, 14, 15, 16, 18, 19, 20, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 34, 35, 36, 37, 38, 39, 40, 41, 43, 44, 45, 47, 51, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 66, 67, 70, 71, 74, 75, 76, 77, 78, 80, 81, 82, 84, 85, 86, 88, 89, 90, 91, 93, 96, 97, 98, 99, 100, 101, 102, 104, 105, 106, 107, 108, 110, 111, 112, 113, 114, 116, 118, 119, 124, 125, 126, 127, 130, 132, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 149, 150, 151, 152, 153, 155, 156, 157, 158, 160, 162, 165, 166, 167, 169], "could": [0, 5, 12, 13, 29, 34, 37, 38, 39, 42, 47, 57, 58, 64, 70, 72, 75, 76, 77, 82, 84, 88, 94, 98, 106, 107, 111, 123, 132, 142, 144, 149, 150, 151, 152, 164, 167], "plotax": [0, 3, 47, 82, 130, 147], "surfac": [0, 17, 24, 27, 32, 34, 36, 37, 42, 47, 48, 50, 52, 55, 72, 75, 81, 83, 89, 96, 108, 112, 115, 123, 142, 143, 151, 162], "elev": [0, 24, 27, 34, 42, 48, 50, 52, 55, 57, 63, 72, 81, 112, 115, 130, 142, 143, 151, 162, 164, 166], "after": [0, 1, 3, 5, 6, 12, 13, 21, 25, 29, 30, 31, 34, 35, 36, 38, 39, 42, 47, 49, 52, 58, 59, 61, 63, 64, 66, 67, 70, 71, 77, 82, 89, 90, 91, 93, 98, 104, 106, 111, 115, 116, 118, 119, 123, 124, 136, 141, 144, 148, 149, 150, 152, 158, 167], "earthquak": [0, 19, 27, 32, 48, 49, 52, 114, 144, 151, 159, 162], "none": [0, 1, 2, 3, 16, 26, 29, 32, 35, 37, 42, 47, 51, 55, 63, 70, 77, 91, 94, 97, 98, 103, 104, 106, 109, 116, 118, 119, 125, 127, 128, 129, 130, 131, 134, 135, 136, 139, 148, 150, 152, 158, 164], "instead": [0, 2, 3, 13, 19, 34, 38, 39, 42, 44, 47, 49, 56, 58, 59, 62, 66, 67, 105, 106, 109, 111, 124, 125, 128, 132, 135, 139, 140, 141, 142, 151, 162, 164], "convent": [0, 3, 24, 32, 50, 57, 75, 102, 162], "mention": [0, 19, 96, 148, 149], "abov": [0, 3, 5, 13, 14, 16, 19, 22, 30, 34, 36, 38, 39, 41, 42, 43, 44, 47, 49, 52, 55, 57, 58, 59, 62, 65, 67, 70, 72, 75, 77, 82, 85, 86, 89, 98, 100, 105, 108, 109, 115, 118, 125, 127, 132, 135, 140, 142, 144, 146, 147, 148, 150, 151, 152, 158, 161, 162, 164, 167], "intern": [0, 6, 32, 47, 57, 63, 75, 125, 149, 162, 164, 170], "t_str": 0, "title_str": 0, "xlimit": [0, 47, 55, 130], "arrai": [0, 3, 6, 15, 19, 22, 24, 29, 32, 34, 35, 37, 41, 47, 48, 51, 53, 57, 63, 82, 88, 89, 91, 92, 94, 96, 97, 98, 101, 102, 103, 104, 106, 108, 109, 110, 119, 120, 121, 125, 127, 130, 132, 136, 140, 141, 142, 145, 148, 149, 150, 151, 152, 158, 162, 164, 167], "xmin": [0, 37], "xmax": [0, 37], "auto": [0, 47, 89], "x": [0, 2, 3, 5, 8, 13, 16, 19, 22, 25, 27, 29, 30, 31, 32, 34, 35, 36, 37, 41, 42, 45, 47, 48, 49, 50, 51, 55, 56, 57, 58, 59, 63, 70, 71, 72, 75, 77, 81, 82, 85, 88, 91, 92, 94, 95, 96, 98, 99, 101, 102, 103, 106, 107, 108, 110, 115, 116, 118, 130, 136, 140, 141, 142, 144, 148, 149, 150, 151, 162, 164, 167, 170], "limit": [0, 4, 6, 12, 27, 32, 35, 41, 52, 55, 63, 65, 71, 76, 81, 86, 88, 89, 94, 96, 104, 115, 121, 142, 148, 149, 150, 152, 162, 164, 170], "an": [0, 1, 2, 3, 4, 5, 6, 9, 11, 12, 16, 17, 18, 19, 22, 24, 26, 27, 29, 30, 31, 32, 34, 35, 36, 37, 41, 42, 43, 44, 47, 48, 49, 51, 52, 54, 59, 60, 61, 62, 63, 67, 68, 71, 72, 75, 76, 77, 81, 82, 84, 86, 88, 89, 90, 91, 94, 95, 96, 97, 98, 100, 101, 102, 103, 104, 105, 107, 108, 109, 111, 113, 116, 117, 119, 121, 123, 124, 125, 127, 128, 129, 130, 132, 133, 135, 136, 137, 139, 140, 141, 142, 144, 147, 148, 149, 151, 153, 156, 157, 158, 159, 162, 164, 165, 166, 167], "two": [0, 3, 4, 7, 8, 15, 17, 18, 24, 27, 30, 32, 34, 36, 37, 47, 48, 49, 51, 55, 56, 58, 63, 71, 72, 77, 82, 88, 94, 97, 98, 101, 104, 107, 109, 113, 114, 115, 116, 118, 119, 123, 124, 127, 129, 139, 140, 142, 145, 146, 150, 162, 164, 167, 170], "element": [0, 3, 24, 37, 63, 102, 104, 106, 148, 149, 150, 151], "choos": [0, 7, 60, 62, 63, 75, 101, 118, 148, 151], "automat": [0, 2, 3, 8, 11, 16, 32, 38, 39, 44, 55, 59, 66, 81, 82, 84, 88, 93, 97, 99, 105, 106, 107, 109, 116, 119, 130, 132, 148, 149, 151, 162], "ylimit": [0, 47, 55, 130, 147], "ymin": [0, 37], "ymax": [0, 37], "y": [0, 2, 3, 4, 8, 16, 17, 19, 29, 32, 34, 35, 36, 37, 41, 42, 47, 49, 50, 51, 55, 57, 59, 63, 70, 71, 75, 77, 88, 94, 98, 99, 101, 115, 118, 126, 136, 140, 141, 142, 144, 148, 149, 150, 151, 162, 164], "xticks_fonts": [0, 136], "xtick": [0, 42, 53], "mark": [0, 16, 55, 70, 115, 116], "label": [0, 32, 36, 53, 55, 57, 63, 118, 123, 135, 136, 142, 162, 164], "xticks_kwarg": [0, 136], "dictionari": [0, 1, 2, 3, 32, 37, 47, 64, 82, 88, 91, 97, 102, 103, 106, 108, 111, 158, 162, 164], "locat": [0, 5, 6, 7, 13, 19, 32, 34, 36, 49, 50, 51, 55, 57, 62, 64, 71, 72, 77, 94, 98, 100, 102, 103, 109, 111, 113, 115, 124, 126, 143, 144, 151, 158, 159, 164], "xlabel": [0, 136], "xlabel_fonts": [0, 136], "xlabel_kwarg": [0, 136], "yticks_fonts": [0, 136], "ytick": 0, "yticks_kwarg": [0, 136], "ylabel": [0, 136], "ylabel_fonts": [0, 136], "ylabel_kwarg": [0, 136], "aspect": [0, 12, 26, 31, 46, 52, 53, 71, 136, 164], "ratio": [0, 3, 6, 15, 24, 49, 53, 71, 75, 92, 102, 104, 145, 148, 149, 150], "gca": [0, 42, 53, 70], "set_aspect": [0, 42, 53, 70], "aspect_latitud": [0, 136], "longitud": [0, 32, 34, 37, 50, 51, 57, 63, 70, 75, 81, 123, 142, 151, 158, 164], "latitud": [0, 15, 32, 34, 37, 49, 50, 51, 57, 75, 81, 123, 142, 145, 151, 154, 158, 164], "coordin": [0, 4, 25, 32, 34, 36, 48, 51, 63, 77, 81, 88, 94, 98, 99, 108, 115, 142, 151, 164], "chose": [0, 68, 137], "so": [0, 5, 6, 8, 9, 13, 16, 18, 19, 21, 24, 29, 30, 31, 32, 35, 36, 37, 38, 39, 41, 42, 43, 44, 45, 47, 49, 52, 53, 55, 56, 57, 58, 59, 60, 63, 64, 66, 67, 70, 71, 72, 75, 76, 77, 78, 81, 82, 85, 88, 89, 90, 97, 98, 101, 106, 108, 109, 113, 115, 116, 118, 119, 120, 124, 125, 126, 127, 128, 129, 130, 132, 135, 136, 140, 142, 143, 144, 147, 148, 149, 150, 151, 154, 158, 161, 162, 164, 166, 167, 168], "distanc": [0, 32, 36, 49, 51, 55, 75, 151, 162, 164], "meter": [0, 18, 19, 32, 49, 51, 55, 70, 72, 75, 115, 143, 151, 158, 164, 166], "same": [0, 3, 5, 6, 8, 13, 16, 18, 19, 24, 27, 30, 33, 34, 35, 36, 37, 42, 44, 47, 49, 50, 51, 52, 55, 57, 58, 59, 62, 63, 64, 66, 68, 70, 75, 77, 78, 81, 82, 83, 84, 88, 92, 94, 96, 97, 98, 101, 102, 104, 109, 110, 118, 119, 120, 124, 125, 130, 132, 136, 139, 140, 142, 148, 149, 150, 151, 156, 162, 164, 167], "cover": [0, 6, 7, 29, 30, 32, 34, 36, 37, 41, 42, 55, 63, 70, 75, 115, 120, 125, 144, 150, 162], "broad": [0, 164], "rang": [0, 3, 5, 13, 32, 47, 51, 55, 115, 119, 124, 141, 142], "middl": [0, 102, 124], "most": [0, 3, 19, 22, 24, 29, 31, 34, 36, 38, 39, 43, 44, 47, 49, 52, 54, 55, 56, 57, 58, 61, 63, 66, 70, 71, 76, 77, 78, 81, 82, 84, 86, 94, 98, 99, 104, 107, 108, 110, 115, 116, 118, 124, 126, 132, 135, 137, 138, 139, 140, 141, 142, 143, 147, 148, 149, 151, 154, 155, 167], "interest": [0, 5, 12, 16, 17, 19, 20, 25, 29, 31, 34, 36, 37, 42, 53, 71, 72, 89, 106, 113, 115, 116, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 144, 148, 158], "gener": [0, 1, 2, 3, 4, 5, 6, 7, 9, 11, 13, 14, 16, 17, 18, 19, 21, 22, 26, 27, 30, 31, 34, 36, 41, 42, 43, 44, 47, 48, 49, 52, 55, 57, 59, 61, 64, 66, 67, 68, 72, 75, 76, 77, 81, 82, 83, 84, 86, 89, 90, 92, 94, 99, 100, 101, 103, 104, 105, 108, 109, 111, 113, 115, 119, 123, 125, 136, 139, 142, 143, 146, 148, 149, 153, 159, 161, 162, 167, 168], "appropri": [0, 4, 5, 6, 13, 16, 19, 26, 30, 48, 52, 53, 55, 59, 61, 63, 64, 68, 71, 74, 76, 88, 91, 92, 93, 97, 99, 100, 101, 102, 103, 116, 129, 140, 143, 148, 158, 167, 170], "valu": [0, 3, 5, 6, 7, 16, 18, 19, 22, 24, 29, 32, 35, 36, 37, 38, 39, 41, 42, 44, 47, 48, 49, 51, 53, 54, 55, 57, 63, 64, 66, 68, 70, 71, 72, 75, 76, 77, 82, 89, 94, 96, 97, 98, 101, 102, 103, 104, 106, 108, 109, 115, 116, 119, 120, 122, 123, 125, 127, 129, 130, 132, 135, 139, 140, 142, 143, 144, 148, 149, 150, 151, 152, 154, 158, 159, 162, 164, 165, 167, 170], "np": [0, 32, 41, 88, 94, 98, 101, 141, 150], "co": [0, 26, 32, 37, 42, 51, 53, 59, 70, 88, 101, 144], "pi": [0, 42, 51, 53, 70, 88, 101], "180": [0, 32, 42, 53, 63, 70, 75], "useoffset": [0, 42, 53, 136], "boolean": [0, 3, 55, 70, 97, 102, 148, 149, 151], "tick": [0, 55, 136], "mai": [0, 1, 2, 3, 4, 5, 6, 12, 13, 17, 19, 20, 21, 22, 24, 25, 26, 27, 29, 30, 31, 32, 34, 36, 37, 38, 39, 40, 42, 43, 44, 49, 50, 51, 52, 53, 55, 57, 58, 61, 62, 65, 66, 68, 70, 71, 72, 75, 76, 81, 82, 84, 85, 86, 89, 90, 93, 94, 96, 97, 98, 101, 103, 104, 107, 109, 111, 115, 116, 118, 121, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 142, 143, 144, 146, 147, 148, 149, 150, 151, 158, 159, 160, 162, 164, 165, 167], "offset": [0, 53, 55, 63, 158, 164], "from": [0, 1, 3, 4, 5, 6, 7, 12, 14, 15, 16, 17, 18, 19, 20, 25, 28, 29, 31, 34, 36, 38, 39, 41, 46, 47, 48, 49, 52, 55, 56, 57, 59, 60, 61, 62, 64, 65, 66, 67, 71, 72, 74, 75, 77, 81, 82, 86, 87, 88, 90, 91, 94, 95, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 108, 109, 111, 112, 113, 115, 116, 118, 119, 120, 123, 124, 125, 127, 130, 131, 132, 135, 136, 137, 138, 139, 140, 141, 143, 144, 145, 148, 149, 150, 151, 152, 154, 156, 157, 158, 159, 160, 162, 165, 166, 167, 168], "some": [0, 3, 4, 5, 6, 7, 8, 10, 12, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 27, 29, 30, 32, 34, 36, 37, 38, 39, 42, 44, 47, 48, 49, 50, 52, 53, 55, 56, 57, 58, 59, 62, 67, 70, 75, 76, 77, 81, 83, 84, 86, 89, 90, 92, 96, 97, 98, 100, 101, 103, 105, 106, 107, 108, 110, 111, 113, 114, 115, 116, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 140, 142, 143, 144, 147, 148, 149, 150, 152, 153, 154, 158, 159, 161, 162, 164, 167], "common": [0, 3, 18, 19, 25, 30, 38, 39, 43, 44, 66, 67, 78, 81, 88, 102, 104, 106, 107, 118, 125, 127, 130, 136, 165, 167], "print": [0, 1, 3, 7, 31, 37, 42, 55, 57, 63, 64, 70, 71, 82, 94, 98, 99, 100, 106, 108, 110, 111, 119, 120, 123, 125, 126, 127, 134, 142, 148, 150, 152, 158, 165], "corner": [0, 3, 32, 34, 57, 75, 77, 94, 142, 148, 150, 152, 162, 164], "often": [0, 6, 11, 13, 16, 19, 22, 29, 31, 34, 37, 38, 39, 43, 44, 47, 48, 52, 53, 54, 63, 64, 68, 72, 75, 77, 98, 110, 111, 115, 116, 132, 136, 139, 140, 142, 143, 144, 147, 148, 151, 158, 162, 166, 167, 170], "nicer": [0, 84, 136], "full": [0, 5, 6, 14, 19, 37, 59, 61, 62, 63, 77, 82, 91, 98, 104, 108, 135, 146, 148, 162, 167], "each": [0, 1, 2, 3, 5, 6, 7, 12, 16, 18, 19, 20, 24, 32, 34, 36, 37, 45, 47, 49, 51, 55, 57, 58, 59, 63, 64, 67, 70, 71, 72, 75, 76, 77, 80, 81, 82, 84, 88, 89, 92, 94, 97, 98, 99, 101, 102, 103, 104, 106, 108, 115, 116, 118, 119, 120, 124, 125, 127, 128, 130, 135, 136, 137, 139, 140, 141, 142, 144, 147, 148, 149, 150, 151, 152, 158, 161, 162, 164, 166, 170], "which": [0, 1, 3, 4, 5, 6, 7, 11, 12, 13, 14, 16, 18, 19, 22, 24, 27, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 45, 46, 47, 49, 50, 52, 55, 57, 58, 59, 60, 61, 62, 63, 64, 66, 68, 70, 71, 72, 75, 76, 77, 82, 84, 85, 88, 89, 91, 92, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 107, 108, 109, 110, 113, 115, 116, 118, 119, 120, 123, 125, 127, 128, 130, 132, 135, 136, 137, 139, 140, 141, 142, 143, 144, 148, 149, 150, 151, 154, 158, 159, 162, 164, 166, 167, 169, 170], "should": [0, 1, 2, 3, 4, 5, 6, 12, 13, 14, 16, 19, 20, 21, 22, 24, 25, 27, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 47, 49, 52, 55, 57, 58, 59, 60, 61, 62, 63, 66, 68, 70, 71, 74, 75, 76, 77, 81, 82, 84, 89, 94, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 108, 109, 111, 112, 115, 116, 118, 119, 120, 123, 125, 126, 127, 130, 135, 136, 137, 139, 140, 141, 143, 144, 146, 147, 148, 149, 150, 151, 152, 153, 158, 160, 162, 164, 165, 167, 169, 170], "ticklabel_format": [0, 42, 53], "issu": [0, 19, 24, 26, 28, 58, 59, 62, 71, 88, 93, 94, 96, 104, 105, 107, 116, 118, 119, 124, 125, 126, 127, 140, 151, 165], "grid": [0, 4, 7, 17, 18, 19, 21, 22, 24, 25, 27, 29, 30, 41, 42, 47, 48, 50, 52, 55, 56, 63, 70, 71, 72, 77, 78, 81, 86, 88, 96, 97, 98, 99, 101, 102, 103, 104, 106, 108, 115, 116, 118, 119, 120, 122, 123, 125, 126, 127, 130, 132, 134, 135, 136, 137, 140, 141, 142, 143, 144, 148, 149, 150, 152, 159, 161, 162, 164, 166, 167, 170], "grid_kwarg": [0, 136], "add": [0, 11, 12, 13, 16, 17, 18, 19, 29, 30, 32, 47, 51, 55, 58, 59, 61, 62, 67, 70, 71, 75, 81, 88, 93, 94, 98, 99, 101, 109, 118, 120, 123, 125, 126, 127, 130, 136, 141, 152, 154, 158, 162, 164, 168], "line": [0, 1, 3, 4, 16, 19, 30, 31, 32, 34, 35, 42, 44, 47, 48, 49, 50, 51, 54, 55, 57, 58, 63, 64, 66, 67, 71, 77, 81, 82, 96, 97, 99, 104, 108, 109, 110, 111, 118, 119, 120, 123, 125, 132, 136, 137, 142, 147, 148, 150, 158, 162, 164], "linewidth": [0, 82, 142], "afterax": [0, 29, 47, 55, 82, 136], "function": [0, 1, 2, 3, 5, 7, 15, 17, 18, 19, 24, 25, 27, 29, 30, 32, 34, 37, 42, 47, 48, 49, 54, 55, 57, 66, 67, 68, 72, 75, 81, 82, 83, 88, 89, 91, 92, 93, 94, 95, 97, 100, 101, 102, 103, 106, 109, 110, 115, 116, 118, 119, 120, 123, 124, 125, 126, 127, 132, 135, 136, 140, 142, 144, 145, 147, 148, 149, 150, 151, 152, 158, 162, 163, 164, 165, 167], "execut": [0, 1, 3, 14, 16, 19, 21, 29, 31, 34, 38, 39, 47, 63, 71, 82, 84, 91, 93, 99, 111, 116, 118, 140, 146, 165], "exec": [0, 1, 3, 82], "defin": [0, 1, 3, 5, 6, 7, 24, 29, 32, 34, 36, 37, 41, 42, 44, 55, 63, 64, 66, 70, 71, 75, 82, 84, 88, 91, 94, 100, 101, 103, 104, 106, 108, 109, 115, 119, 127, 132, 136, 140, 150, 152, 158, 162, 164, 165, 167, 170], "have": [0, 1, 2, 3, 4, 5, 6, 8, 9, 11, 12, 13, 14, 16, 18, 19, 20, 22, 24, 25, 26, 27, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 42, 44, 45, 47, 48, 49, 51, 52, 55, 56, 58, 59, 60, 62, 66, 67, 68, 70, 71, 72, 75, 76, 77, 81, 82, 84, 85, 86, 88, 89, 92, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 111, 113, 115, 116, 118, 119, 120, 122, 123, 124, 125, 126, 127, 129, 130, 132, 133, 135, 136, 137, 139, 140, 141, 142, 143, 148, 149, 151, 153, 154, 158, 162, 164, 165, 167], "argument": [0, 1, 2, 3, 29, 32, 37, 48, 51, 54, 55, 57, 82, 88, 89, 93, 94, 97, 101, 103, 104, 106, 109, 116, 127, 136, 140, 142, 147, 148, 149, 158, 164, 167], "current_data": [0, 3, 27, 47, 81, 82], "version": [0, 1, 4, 5, 6, 7, 8, 9, 11, 13, 15, 16, 18, 19, 22, 24, 25, 30, 32, 34, 36, 41, 42, 44, 45, 47, 48, 49, 50, 52, 55, 57, 60, 61, 63, 64, 67, 68, 70, 71, 75, 76, 78, 81, 82, 84, 85, 89, 92, 96, 97, 99, 102, 104, 105, 107, 110, 112, 115, 116, 118, 119, 120, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 138, 140, 141, 142, 144, 145, 146, 148, 149, 150, 151, 152, 156, 157, 158, 162, 164, 167, 170], "liner": [0, 32], "pylab": [0, 42, 82], "my": [0, 22, 24, 57, 77, 89, 99, 150, 162], "custom": [0, 13, 16, 22, 24, 27, 67, 71, 78, 81, 89, 95, 101, 144], "sinc": [0, 3, 4, 5, 6, 16, 19, 22, 24, 30, 34, 36, 42, 44, 45, 51, 52, 55, 57, 58, 59, 62, 63, 66, 67, 72, 75, 76, 77, 81, 82, 88, 89, 90, 97, 98, 115, 116, 118, 119, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 142, 143, 148, 149, 151, 162, 165, 166], "ha": [0, 4, 5, 6, 8, 12, 13, 14, 16, 18, 19, 20, 22, 23, 24, 25, 26, 29, 30, 31, 34, 36, 37, 38, 39, 42, 45, 47, 49, 54, 55, 56, 57, 58, 59, 63, 64, 66, 68, 70, 71, 72, 75, 77, 78, 82, 86, 89, 91, 94, 98, 101, 102, 103, 106, 107, 109, 111, 112, 113, 115, 116, 117, 118, 119, 120, 125, 126, 127, 128, 129, 130, 132, 135, 136, 137, 138, 140, 142, 143, 148, 149, 151, 154, 158, 161, 162, 164, 167, 168, 170], "been": [0, 1, 4, 5, 8, 9, 13, 14, 16, 18, 19, 20, 22, 23, 24, 26, 27, 29, 30, 31, 34, 35, 36, 37, 38, 39, 42, 45, 47, 48, 49, 52, 55, 56, 57, 58, 59, 64, 66, 68, 70, 71, 75, 78, 82, 84, 86, 89, 91, 97, 98, 102, 103, 106, 107, 108, 109, 111, 113, 115, 117, 118, 119, 120, 122, 125, 126, 127, 128, 129, 130, 132, 133, 135, 136, 137, 139, 140, 142, 148, 149, 151, 154, 162, 164, 167], "import": [0, 3, 5, 18, 19, 24, 30, 34, 36, 40, 41, 42, 47, 51, 52, 55, 57, 60, 62, 63, 67, 68, 70, 75, 78, 82, 84, 88, 89, 91, 93, 94, 96, 97, 98, 99, 100, 101, 103, 104, 105, 106, 108, 116, 118, 125, 130, 140, 141, 142, 143, 144, 148, 149, 150, 151, 152, 154, 162, 164, 166, 168], "modul": [0, 7, 8, 12, 18, 19, 27, 30, 31, 34, 36, 42, 44, 48, 49, 53, 55, 56, 57, 62, 64, 67, 70, 75, 76, 81, 82, 83, 84, 88, 89, 92, 93, 97, 101, 102, 103, 106, 110, 111, 116, 118, 120, 121, 123, 126, 127, 128, 129, 130, 137, 139, 142, 148, 149, 151, 158, 162, 163], "form": [0, 2, 3, 4, 5, 6, 8, 12, 19, 21, 22, 24, 26, 30, 31, 32, 34, 36, 38, 39, 41, 45, 46, 47, 49, 51, 55, 59, 64, 65, 68, 75, 77, 86, 89, 98, 102, 104, 108, 109, 115, 120, 127, 128, 129, 130, 139, 140, 142, 148, 149, 150, 151, 156, 162, 164, 167, 170], "better": [0, 6, 18, 19, 24, 34, 42, 47, 49, 70, 71, 72, 76, 77, 81, 104, 113, 115, 118, 124, 125, 126, 129, 130, 132, 133], "want": [0, 2, 3, 10, 12, 13, 14, 19, 21, 22, 26, 30, 31, 34, 35, 36, 37, 38, 39, 40, 42, 43, 44, 47, 51, 54, 55, 58, 59, 61, 62, 63, 66, 67, 68, 70, 76, 77, 82, 84, 88, 89, 90, 91, 97, 98, 99, 111, 114, 116, 124, 127, 130, 136, 138, 140, 141, 142, 146, 147, 150, 155, 158, 162, 164, 165], "do": [0, 1, 4, 6, 8, 11, 12, 13, 15, 18, 19, 21, 22, 27, 30, 31, 34, 35, 36, 38, 39, 40, 42, 43, 44, 47, 52, 54, 55, 56, 58, 61, 62, 66, 67, 70, 75, 76, 77, 82, 84, 88, 89, 93, 94, 96, 97, 98, 99, 100, 101, 105, 107, 108, 109, 111, 114, 115, 116, 118, 119, 123, 124, 125, 126, 127, 129, 130, 132, 135, 136, 144, 145, 147, 148, 149, 150, 151, 156, 157, 158, 160, 162, 165, 167, 168], "sever": [0, 1, 2, 5, 10, 12, 16, 19, 22, 24, 25, 26, 31, 32, 36, 37, 38, 39, 43, 47, 50, 52, 55, 59, 62, 64, 71, 72, 75, 81, 105, 115, 116, 117, 119, 120, 123, 124, 125, 126, 128, 129, 130, 132, 142, 147, 151, 160, 162, 164, 167], "thing": [0, 13, 16, 19, 24, 30, 31, 42, 52, 58, 63, 84, 93, 115, 116, 118, 126, 131, 139], "need": [0, 4, 5, 6, 12, 13, 15, 16, 18, 19, 20, 21, 22, 24, 29, 30, 31, 34, 35, 36, 37, 38, 39, 40, 42, 43, 44, 47, 49, 52, 53, 57, 58, 59, 60, 62, 63, 64, 66, 67, 70, 71, 75, 76, 77, 78, 84, 85, 88, 89, 91, 96, 97, 98, 99, 101, 104, 108, 110, 111, 113, 115, 116, 118, 120, 124, 125, 127, 128, 132, 134, 135, 136, 137, 139, 140, 142, 144, 145, 146, 148, 149, 150, 151, 152, 156, 157, 158, 159, 160, 162, 164, 166, 167, 170], "access": [0, 17, 29, 31, 59, 62, 93, 94, 96, 104, 106, 109], "data": [0, 1, 3, 5, 18, 19, 27, 29, 32, 34, 35, 36, 37, 38, 39, 41, 42, 43, 45, 47, 48, 50, 51, 57, 58, 63, 64, 65, 66, 70, 71, 73, 81, 82, 83, 84, 86, 88, 91, 94, 97, 98, 100, 102, 103, 104, 106, 109, 112, 113, 114, 115, 118, 119, 121, 122, 124, 125, 127, 128, 129, 130, 132, 136, 137, 139, 140, 142, 143, 149, 150, 152, 158, 161, 163, 168], "store": [0, 1, 13, 19, 35, 37, 43, 55, 57, 58, 71, 77, 97, 98, 101, 106, 107, 108, 116, 119, 125, 147, 149, 151, 158, 161, 162, 164], "def": [0, 1, 3, 47, 55, 70, 82, 88, 94, 98, 101, 104, 150, 152, 158], "1d": [0, 4, 7, 15, 19, 21, 24, 27, 31, 32, 37, 48, 49, 63, 67, 71, 72, 81, 82, 88, 96, 99, 100, 102, 104, 110, 112, 118, 123, 126, 128, 129, 137, 140, 141, 145, 149, 157, 164, 167], "alreadi": [0, 1, 6, 12, 13, 19, 20, 30, 31, 44, 59, 60, 62, 63, 64, 70, 84, 85, 99, 103, 105, 108, 110, 118, 120, 128, 135, 136, 137, 146, 164], "xlower": [0, 3, 16, 24, 29, 42, 49, 89, 127, 150, 152, 162, 164, 167], "xupper": [0, 24, 49, 150, 152, 164], "k": [0, 3, 4, 6, 17, 71, 92, 97, 102, 108, 142], "get": [0, 10, 13, 19, 26, 30, 43, 48, 55, 57, 58, 60, 61, 62, 66, 67, 70, 81, 85, 88, 89, 94, 97, 98, 99, 105, 107, 108, 109, 110, 113, 114, 116, 126, 140, 142, 149, 158, 164, 165], "variabl": [0, 3, 5, 13, 14, 18, 19, 24, 27, 29, 30, 32, 34, 37, 38, 39, 40, 43, 47, 48, 49, 54, 55, 58, 61, 62, 71, 74, 76, 77, 78, 82, 88, 89, 97, 99, 103, 104, 106, 107, 109, 111, 118, 123, 124, 125, 127, 129, 135, 136, 139, 140, 148, 149, 150, 152, 158, 162, 164, 165, 167], "just": [0, 6, 30, 34, 43, 58, 59, 88, 89, 91, 93, 97, 98, 99, 100, 101, 106, 109, 120, 127, 148, 167], "avail": [0, 4, 5, 10, 12, 16, 24, 25, 31, 34, 36, 42, 46, 47, 50, 52, 55, 62, 66, 70, 71, 72, 78, 81, 83, 84, 88, 91, 96, 97, 98, 100, 102, 104, 107, 108, 109, 110, 111, 115, 126, 137, 140, 141, 143, 148, 150, 153, 158, 159, 162], "var": [0, 3, 13, 29, 37, 158], "min": [0, 102, 164, 170], "max": [0, 32, 34, 42, 71, 102, 115, 120, 144, 150, 152, 164, 170], "primarili": [0, 19, 56, 77, 127, 128], "where": [0, 1, 3, 5, 6, 12, 13, 16, 18, 19, 24, 29, 32, 34, 36, 37, 38, 39, 41, 42, 43, 47, 48, 49, 52, 55, 57, 62, 63, 64, 66, 68, 70, 71, 72, 77, 78, 84, 91, 94, 95, 96, 97, 99, 102, 111, 115, 118, 119, 120, 123, 124, 125, 130, 132, 139, 141, 142, 143, 144, 147, 148, 149, 150, 151, 152, 158, 161, 162, 164, 167, 170], "horizont": [0, 55, 164], "implement": [0, 1, 4, 5, 7, 14, 16, 18, 19, 32, 42, 49, 63, 64, 67, 74, 86, 101, 102, 104, 108, 109, 116, 122, 125, 128, 130, 132, 140, 141, 148, 164, 167, 170], "claw": [0, 5, 6, 8, 11, 12, 13, 14, 15, 16, 18, 19, 21, 22, 24, 26, 30, 32, 34, 35, 36, 37, 38, 39, 40, 41, 43, 44, 46, 47, 48, 49, 51, 53, 54, 56, 58, 59, 61, 62, 63, 66, 67, 71, 74, 75, 76, 83, 88, 91, 93, 96, 97, 98, 99, 105, 107, 111, 112, 113, 114, 115, 116, 118, 119, 120, 122, 123, 126, 127, 129, 135, 136, 140, 144, 145, 150, 151, 152, 154, 155, 156, 157, 160, 161, 162, 164, 165, 167, 168], "visclaw": [0, 1, 7, 13, 24, 25, 26, 30, 36, 42, 47, 48, 50, 53, 55, 59, 60, 61, 62, 66, 70, 71, 78, 82, 83, 84, 85, 96, 100, 105, 111, 146, 147, 153], "src": [0, 5, 6, 11, 14, 15, 16, 18, 19, 21, 22, 30, 32, 34, 35, 36, 37, 42, 43, 44, 49, 51, 54, 56, 59, 62, 63, 66, 67, 71, 75, 76, 83, 100, 101, 109, 111, 112, 115, 116, 118, 120, 123, 124, 126, 127, 128, 129, 130, 132, 136, 137, 140, 144, 145, 148, 150, 152, 154, 156, 164, 165, 170], "python": [0, 3, 4, 7, 8, 11, 13, 14, 17, 21, 24, 25, 27, 29, 30, 31, 32, 35, 36, 37, 38, 39, 40, 43, 45, 47, 48, 50, 51, 54, 55, 57, 58, 59, 60, 61, 62, 63, 75, 77, 78, 81, 82, 83, 86, 87, 89, 93, 94, 96, 97, 99, 100, 101, 102, 104, 107, 108, 109, 116, 118, 120, 121, 123, 125, 126, 127, 128, 129, 132, 136, 137, 140, 141, 146, 151, 162, 164, 165, 168], "gaugetool": [0, 47, 123], "time_scal": 0, "scale": [0, 4, 32, 53, 55, 71, 78, 96, 97, 118, 119, 125, 127, 132, 151], "3600": [0, 34, 36, 77], "time_label": 0, "time_label_fonts": 0, "time_label_kwarg": [0, 136], "new_plotitem": [0, 3, 47, 55, 82, 147], "plot_typ": [0, 24, 47, 55, 82, 84, 147], "return": [0, 1, 2, 3, 32, 35, 37, 40, 51, 55, 63, 67, 70, 71, 82, 84, 91, 92, 94, 97, 98, 101, 102, 103, 104, 106, 109, 116, 126, 140, 142, 148, 150, 152, 158, 160, 164, 167, 170], "clawplotitem": [0, 1, 7, 24, 29, 81, 83, 118, 124, 127, 136, 147], "associ": [0, 1, 2, 6, 24, 55, 62, 76, 94, 97, 98, 116], "kei": [0, 1, 2, 13, 30, 32, 47, 97, 104, 108, 109, 158, 164], "provid": [0, 2, 4, 7, 10, 16, 19, 22, 29, 30, 32, 34, 36, 37, 41, 44, 48, 49, 50, 51, 52, 55, 57, 58, 63, 65, 67, 72, 75, 77, 81, 86, 89, 91, 92, 97, 98, 99, 101, 103, 104, 108, 109, 110, 113, 114, 116, 118, 124, 132, 136, 138, 140, 148, 157, 158, 161, 162, 164, 167], "one": [0, 1, 2, 3, 4, 5, 6, 8, 13, 15, 16, 18, 19, 22, 24, 26, 27, 29, 30, 31, 32, 34, 36, 37, 38, 39, 42, 47, 49, 50, 55, 57, 58, 59, 60, 61, 62, 63, 64, 68, 70, 71, 72, 74, 75, 77, 78, 81, 82, 88, 94, 97, 98, 99, 101, 103, 104, 105, 108, 109, 111, 113, 115, 116, 118, 124, 125, 127, 132, 135, 139, 140, 141, 142, 144, 145, 147, 148, 149, 150, 151, 152, 153, 156, 157, 158, 162, 164, 167, 168], "item1": [0, 84], "etc": [0, 2, 16, 21, 22, 26, 29, 30, 34, 35, 36, 52, 55, 58, 61, 63, 67, 77, 81, 89, 140, 147, 148, 151, 158, 167], "gethandl": [0, 2, 3], "handl": [0, 2, 3, 6, 34, 42, 44, 48, 57, 63, 76, 78, 81, 94, 97, 101, 103, 104, 106, 107, 108, 109, 111, 118, 119, 120, 122, 123, 125, 127, 128, 129, 130, 141, 144, 158, 164], "plot": [1, 2, 4, 7, 8, 12, 29, 31, 32, 38, 39, 40, 42, 43, 44, 45, 48, 49, 57, 59, 60, 63, 70, 77, 87, 88, 90, 91, 94, 95, 96, 98, 103, 105, 107, 108, 110, 111, 113, 118, 122, 123, 124, 125, 126, 127, 129, 130, 131, 135, 136, 142, 148, 160, 164], "outdir": [1, 3, 35, 36, 37, 38, 39, 47, 54, 66, 81, 84, 91, 93, 94, 98, 124, 150, 152, 165], "path": [1, 5, 13, 14, 32, 34, 37, 41, 42, 44, 47, 49, 51, 55, 58, 61, 62, 64, 66, 70, 74, 81, 82, 91, 96, 97, 99, 103, 109, 126, 127, 130, 136, 146, 151, 158, 164, 165], "directori": [1, 3, 5, 6, 11, 12, 13, 14, 15, 16, 19, 21, 22, 24, 25, 27, 30, 31, 33, 34, 36, 37, 38, 39, 40, 43, 45, 46, 47, 48, 51, 54, 55, 58, 59, 61, 63, 67, 71, 76, 80, 81, 84, 91, 93, 94, 96, 97, 98, 101, 108, 111, 112, 113, 115, 116, 118, 119, 124, 125, 126, 127, 129, 139, 140, 144, 145, 146, 147, 148, 149, 153, 156, 157, 160, 161, 162, 165, 167, 168], "clawpack": [1, 2, 4, 5, 6, 7, 11, 16, 18, 19, 28, 30, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 44, 45, 47, 48, 49, 50, 51, 52, 54, 55, 62, 63, 64, 65, 67, 70, 71, 73, 74, 75, 76, 77, 80, 81, 82, 83, 84, 85, 86, 87, 88, 90, 91, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 106, 107, 108, 109, 110, 111, 114, 116, 117, 119, 120, 121, 122, 123, 124, 125, 139, 140, 142, 146, 148, 149, 150, 151, 153, 155, 158, 160, 162, 164, 165, 167, 168, 170], "output": [1, 5, 7, 8, 13, 14, 16, 27, 29, 30, 31, 32, 35, 37, 38, 39, 43, 44, 47, 48, 50, 51, 53, 54, 55, 59, 64, 72, 75, 81, 82, 84, 89, 91, 92, 93, 94, 95, 96, 99, 100, 102, 103, 104, 105, 106, 108, 109, 111, 118, 119, 123, 124, 125, 126, 127, 129, 130, 131, 135, 136, 137, 140, 147, 150, 152, 158, 159, 160, 161, 164, 167, 168], "plotdir": [1, 84, 147], "hardcopi": [1, 82, 84, 147], "file": [1, 5, 6, 7, 8, 9, 11, 12, 14, 15, 18, 19, 20, 21, 22, 24, 25, 27, 29, 30, 32, 35, 37, 38, 39, 41, 43, 44, 45, 47, 48, 49, 50, 52, 54, 56, 62, 63, 64, 66, 70, 75, 77, 78, 81, 83, 86, 89, 91, 93, 94, 96, 97, 98, 99, 100, 101, 103, 106, 107, 109, 111, 112, 113, 115, 118, 119, 120, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 141, 143, 144, 145, 146, 147, 148, 149, 150, 152, 155, 156, 157, 158, 159, 161, 164, 165, 166, 168], "put": [1, 11, 16, 30, 31, 44, 58, 62, 63, 71, 88, 93, 101, 125, 146], "overwrit": [1, 91, 98, 103], "ok": [1, 39, 40, 91, 99, 109, 120, 160, 164], "old": [1, 7, 22, 24, 34, 42, 58, 59, 84, 91, 99, 100, 101, 104, 116, 124, 126, 127, 132, 135, 137, 140, 151, 162], "afterfram": [1, 29, 81], "produc": [1, 3, 24, 29, 32, 37, 38, 39, 43, 47, 48, 55, 57, 58, 63, 71, 76, 80, 81, 97, 115, 116, 132, 147, 164], "frame": [1, 2, 3, 29, 36, 37, 47, 55, 71, 77, 81, 82, 84, 88, 91, 95, 97, 99, 103, 105, 109, 125, 135, 136, 139, 147, 150, 152, 153], "done": [1, 6, 7, 8, 11, 13, 16, 21, 22, 30, 36, 38, 39, 42, 47, 50, 55, 57, 58, 60, 63, 66, 70, 71, 75, 81, 82, 84, 88, 92, 93, 96, 109, 115, 120, 124, 125, 129, 139, 140, 142, 147, 149, 151, 161, 164, 165, 166], "beforefram": [1, 29, 127], "befor": [1, 3, 4, 6, 14, 19, 30, 32, 34, 36, 37, 38, 39, 42, 43, 44, 47, 57, 58, 59, 60, 62, 63, 66, 67, 71, 76, 77, 84, 88, 91, 97, 99, 104, 106, 111, 115, 116, 118, 119, 120, 131, 135, 136, 138, 140, 143, 144, 148, 149, 162, 164, 165], "start": [1, 2, 4, 5, 6, 7, 9, 13, 14, 19, 26, 29, 30, 32, 34, 36, 38, 39, 40, 41, 42, 43, 47, 48, 49, 51, 55, 57, 58, 59, 60, 61, 62, 63, 66, 70, 74, 75, 77, 82, 84, 88, 99, 103, 104, 110, 111, 115, 116, 124, 127, 132, 138, 139, 140, 142, 144, 151, 154, 158, 160, 162, 167], "printfig": 1, "png": [1, 13, 38, 39, 42, 43, 55, 63, 70, 71, 125, 130, 142], "make": [1, 5, 11, 13, 14, 19, 21, 22, 24, 26, 27, 29, 30, 34, 36, 38, 39, 41, 43, 44, 47, 50, 52, 54, 55, 58, 59, 62, 63, 64, 66, 67, 68, 71, 76, 78, 81, 84, 85, 88, 89, 91, 94, 95, 96, 97, 101, 103, 109, 114, 116, 118, 119, 123, 124, 125, 126, 127, 129, 130, 131, 132, 133, 135, 136, 140, 142, 148, 162, 164, 166, 167], "html": [1, 12, 13, 25, 30, 32, 38, 39, 43, 46, 47, 55, 58, 59, 75, 81, 82, 93, 97, 99, 100, 110, 111, 116, 118, 128, 130, 135, 136, 158], "latex": [1, 55, 81, 100], "exist": [1, 19, 23, 32, 33, 36, 38, 39, 55, 62, 66, 70, 71, 82, 94, 98, 101, 103, 106, 109, 120, 126, 127, 144, 158, 164, 166], "print_format": [1, 55], "print_frameno": [1, 55], "list": [1, 3, 4, 7, 8, 9, 11, 13, 17, 18, 19, 20, 24, 27, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 43, 47, 49, 55, 57, 58, 60, 61, 62, 63, 65, 66, 67, 68, 71, 72, 75, 76, 77, 82, 84, 86, 88, 91, 92, 94, 97, 98, 100, 101, 102, 103, 104, 106, 107, 109, 111, 115, 118, 123, 125, 127, 132, 135, 136, 137, 139, 142, 146, 148, 149, 150, 151, 152, 158, 159, 161, 164], "int": [1, 2, 3, 32, 34, 63, 91, 92, 94, 97, 98, 103, 106, 148, 149, 151, 158, 164], "print_figno": [1, 55, 118], "iplotclaw_figno": 1, "interact": [1, 13, 24, 38, 39, 43, 47, 50, 66, 78, 81, 82, 89, 99, 100, 104, 105, 108, 111, 124, 125, 142], "mode": [1, 13, 30, 109, 161], "displai": [1, 13, 38, 39, 43, 47, 55, 63, 82, 98, 116, 151], "latex_fnam": 1, "tex": 1, "latex_titl": 1, "go": [1, 5, 13, 16, 19, 24, 27, 30, 32, 38, 39, 58, 59, 60, 62, 67, 70, 71, 77, 84, 88, 91, 93, 96, 97, 102, 117, 124, 125, 132, 139, 143, 147, 153, 158, 162, 166, 170], "result": [1, 3, 4, 7, 9, 12, 17, 18, 19, 27, 28, 31, 32, 34, 35, 36, 38, 39, 40, 45, 46, 47, 48, 51, 52, 57, 58, 59, 62, 63, 66, 68, 71, 72, 75, 77, 81, 82, 83, 84, 87, 91, 93, 96, 98, 102, 105, 109, 115, 116, 118, 119, 123, 125, 126, 127, 128, 130, 132, 135, 136, 144, 148, 149, 150, 152, 160, 162, 164, 166], "latex_framesperpag": 1, "how": [1, 6, 7, 12, 16, 24, 26, 30, 31, 32, 34, 36, 38, 39, 41, 42, 44, 47, 50, 55, 59, 63, 64, 66, 70, 75, 76, 77, 81, 91, 93, 95, 96, 97, 101, 104, 108, 109, 111, 113, 114, 115, 116, 120, 125, 127, 129, 130, 135, 138, 139, 140, 147, 148, 151, 153, 162, 164, 168], "mani": [1, 3, 4, 6, 12, 13, 18, 19, 22, 23, 24, 30, 36, 38, 39, 40, 44, 45, 46, 49, 50, 55, 56, 58, 63, 64, 66, 67, 70, 75, 76, 77, 82, 84, 85, 86, 88, 93, 96, 101, 103, 108, 109, 115, 117, 118, 119, 125, 127, 128, 129, 130, 134, 137, 140, 142, 147, 148, 149, 151, 162, 167], "try": [1, 30, 31, 38, 39, 40, 47, 55, 57, 62, 63, 70, 82, 90, 93, 96, 97, 103, 105, 107, 108, 109, 111, 116, 148, 160, 164, 165], "page": [1, 4, 9, 11, 13, 15, 17, 19, 20, 24, 26, 30, 52, 57, 59, 60, 61, 62, 93, 96, 99, 100, 107, 110, 112, 116, 118, 126, 130, 135, 136, 137, 143, 145, 147, 153, 156, 157, 166, 167], "latex_framesperlin": 1, "latex_figsperlin": 1, "recal": [1, 12, 42, 149], "latex_pdf": 1, "run": [1, 5, 6, 7, 12, 13, 14, 16, 19, 22, 24, 26, 27, 30, 34, 35, 36, 37, 42, 43, 45, 46, 47, 48, 54, 55, 56, 58, 59, 60, 61, 62, 63, 64, 66, 68, 71, 77, 78, 81, 82, 84, 85, 87, 89, 91, 94, 95, 96, 98, 101, 105, 107, 108, 109, 111, 113, 115, 118, 119, 120, 124, 125, 126, 127, 128, 129, 131, 132, 134, 139, 140, 150, 151, 152, 158, 160, 161, 164, 167], "pdflatex": 1, "pdf": [1, 32], "index": [1, 6, 13, 24, 25, 29, 35, 37, 47, 58, 59, 82, 94, 96, 99, 101, 102, 109, 118, 127, 132, 136, 148, 149, 150, 151, 152], "call": [1, 6, 9, 22, 24, 29, 32, 36, 37, 41, 44, 47, 54, 55, 67, 70, 71, 75, 77, 82, 84, 88, 89, 91, 92, 97, 98, 101, 103, 104, 106, 108, 109, 115, 116, 118, 119, 123, 124, 126, 127, 136, 140, 142, 144, 146, 148, 150, 151, 152, 158, 164, 167], "_plotindex": [1, 47, 118], "These": [1, 4, 5, 12, 16, 18, 19, 20, 25, 30, 31, 32, 34, 36, 41, 45, 47, 52, 55, 58, 63, 64, 67, 70, 71, 78, 82, 84, 88, 93, 96, 97, 98, 100, 106, 108, 112, 114, 115, 116, 118, 119, 125, 126, 127, 128, 132, 135, 136, 137, 139, 149, 153, 158, 159, 162, 166, 170], "new_plotfigur": [1, 2, 47, 55, 82, 147], "figno": [1, 2, 47, 55, 82, 84, 118, 147], "getfram": [1, 3, 84], "frameno": [1, 3, 29, 37], "clawsolut": 1, "solut": [1, 3, 4, 5, 16, 18, 19, 24, 27, 29, 31, 36, 37, 39, 47, 49, 51, 64, 71, 75, 77, 81, 84, 89, 91, 94, 96, 97, 98, 101, 102, 104, 106, 107, 108, 115, 116, 123, 124, 128, 135, 139, 140, 147, 148, 149, 150, 152, 160, 167, 170], "read": [1, 4, 5, 7, 19, 30, 32, 34, 35, 37, 38, 39, 47, 48, 49, 52, 53, 57, 62, 63, 64, 67, 70, 71, 75, 77, 81, 89, 91, 97, 98, 103, 109, 124, 125, 127, 128, 133, 135, 136, 150, 151, 152, 158, 162, 164, 167, 168], "fort": [1, 8, 29, 34, 36, 47, 71, 81, 97, 103, 120, 124, 125, 126, 135, 139, 148, 149, 150, 152, 161, 168], "q000n": [1, 8], "n": [1, 6, 16, 17, 19, 32, 34, 47, 51, 68, 84, 99, 105, 116, 118, 127, 142, 148, 151, 167, 170], "find": [1, 3, 4, 6, 12, 19, 26, 29, 30, 31, 32, 51, 55, 62, 66, 75, 78, 81, 86, 93, 101, 106, 107, 109, 111, 113, 127, 158, 165], "onc": [1, 5, 13, 24, 30, 31, 38, 39, 55, 59, 60, 61, 62, 70, 71, 75, 77, 84, 88, 98, 99, 100, 101, 106, 109, 125, 127, 133], "framesoln_dict": 1, "It": [1, 4, 6, 12, 19, 22, 24, 30, 31, 34, 36, 47, 49, 52, 53, 55, 57, 58, 63, 67, 75, 81, 82, 88, 91, 94, 97, 98, 99, 104, 108, 111, 115, 116, 120, 125, 135, 139, 142, 143, 144, 148, 149, 151, 162, 164, 165, 166, 167], "q": [1, 3, 5, 6, 16, 19, 22, 24, 29, 36, 37, 47, 71, 77, 81, 84, 88, 89, 94, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 108, 115, 120, 123, 125, 141, 148, 149, 150, 152, 162, 167, 168, 170], "onli": [1, 3, 5, 6, 8, 12, 13, 16, 18, 19, 21, 24, 29, 30, 32, 34, 36, 37, 41, 42, 45, 46, 47, 49, 52, 55, 58, 59, 60, 62, 63, 64, 67, 68, 71, 72, 75, 76, 77, 78, 82, 88, 91, 94, 97, 98, 99, 101, 103, 104, 105, 106, 108, 109, 110, 113, 115, 118, 119, 124, 125, 126, 127, 130, 132, 135, 139, 140, 141, 142, 143, 144, 146, 147, 148, 149, 150, 151, 152, 154, 158, 162, 164, 165, 166, 167, 170], "separ": [1, 30, 34, 36, 46, 55, 58, 63, 67, 72, 96, 104, 109, 142, 164], "clearfram": [1, 84], "remov": [1, 3, 22, 31, 36, 43, 56, 58, 62, 63, 66, 84, 99, 111, 118, 119, 122, 123, 135, 137, 144, 151, 164, 165], "more": [1, 2, 3, 4, 5, 7, 10, 12, 13, 14, 16, 17, 18, 19, 22, 24, 26, 28, 30, 31, 32, 34, 36, 38, 41, 47, 48, 49, 50, 52, 55, 57, 58, 59, 61, 62, 63, 64, 65, 66, 70, 71, 72, 75, 81, 82, 83, 84, 85, 86, 89, 91, 92, 94, 96, 97, 98, 99, 100, 101, 102, 104, 105, 106, 108, 109, 111, 114, 115, 116, 118, 119, 120, 123, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 140, 142, 143, 144, 146, 147, 148, 149, 150, 151, 153, 154, 158, 160, 161, 162, 164, 165, 166, 167, 170], "yet": [1, 13, 18, 22, 27, 52, 56, 58, 61, 63, 81, 104, 118, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 140, 148, 150, 169], "clearfigur": 1, "clear": [1, 2, 6, 71, 84, 135], "paramet": [1, 6, 7, 9, 16, 18, 19, 22, 27, 29, 32, 34, 35, 36, 38, 39, 42, 43, 45, 48, 49, 50, 52, 55, 57, 66, 67, 68, 71, 75, 76, 77, 81, 87, 88, 91, 92, 97, 98, 100, 102, 103, 106, 109, 112, 115, 119, 125, 130, 132, 135, 137, 139, 140, 141, 143, 144, 150, 152, 154, 159, 162, 164, 165, 167], "first": [1, 3, 5, 13, 14, 19, 21, 22, 24, 30, 32, 34, 36, 37, 38, 39, 40, 41, 42, 55, 58, 59, 62, 63, 66, 70, 71, 82, 84, 88, 89, 94, 97, 98, 99, 101, 104, 105, 106, 108, 109, 111, 113, 115, 119, 123, 128, 136, 140, 141, 142, 144, 148, 150, 151, 158, 160, 162, 164, 170], "sure": [1, 19, 22, 30, 43, 58, 59, 60, 61, 62, 71, 78, 88, 97, 99, 101, 103, 107, 109, 143, 164, 165, 166], "previou": [1, 30, 31, 47, 57, 59, 61, 62, 67, 70, 71, 84, 88, 104, 113, 119, 124, 125, 126, 127, 132, 139, 144, 148, 149, 150, 152, 162, 164], "chang": [1, 6, 8, 13, 15, 16, 18, 19, 21, 22, 27, 30, 31, 32, 34, 36, 43, 44, 49, 54, 55, 56, 57, 58, 59, 62, 63, 66, 67, 68, 70, 71, 76, 77, 78, 81, 84, 88, 89, 95, 97, 98, 106, 109, 110, 113, 114, 115, 116, 138, 140, 144, 145, 148, 149, 150, 151, 152, 154, 156, 157, 162, 165, 167], "re": [1, 17, 30, 43, 47, 66, 71, 78, 82, 84, 88, 105, 115, 116, 129, 165], "session": [1, 38, 39, 40, 100, 105], "iplotclaw": [1, 13, 24, 38, 39, 47, 50, 81, 82, 100, 111], "being": [1, 3, 4, 8, 13, 18, 19, 34, 42, 47, 49, 52, 57, 62, 70, 72, 84, 91, 97, 102, 103, 104, 109, 111, 113, 115, 118, 124, 126, 128, 137, 140, 142, 144, 148, 151, 165, 167], "getfigur": 1, "fignam": [1, 84], "getax": 1, "axesnam": [1, 84], "clawplotax": [1, 2, 3, 29, 82, 127, 132, 136, 147], "search": [1, 13, 14, 17, 62, 81, 96, 109, 111, 125, 127, 142, 146], "over": [1, 3, 5, 6, 13, 16, 17, 24, 30, 32, 34, 36, 41, 42, 47, 48, 49, 50, 52, 55, 57, 63, 64, 70, 71, 72, 75, 81, 97, 98, 104, 115, 118, 119, 120, 128, 130, 140, 142, 144, 147, 149, 150, 151, 161, 162, 167, 170], "found": [1, 4, 5, 6, 11, 12, 13, 16, 19, 24, 26, 29, 31, 34, 37, 38, 39, 43, 45, 47, 49, 51, 52, 54, 58, 63, 66, 67, 72, 80, 82, 83, 84, 88, 92, 99, 103, 107, 109, 111, 113, 116, 124, 127, 139, 143, 147, 154, 158, 164, 165], "uniqu": [1, 77, 118, 124, 158], "getitem": 1, "itemnam": [1, 84], "showitem": 1, "plotfram": 1, "number": [1, 2, 3, 4, 6, 8, 12, 16, 17, 19, 21, 24, 29, 30, 31, 32, 34, 35, 36, 37, 38, 39, 46, 47, 49, 55, 58, 63, 66, 71, 76, 77, 78, 84, 88, 89, 91, 92, 93, 94, 96, 97, 98, 99, 101, 103, 104, 106, 108, 109, 110, 113, 115, 116, 118, 119, 120, 122, 123, 124, 125, 126, 127, 129, 136, 139, 140, 142, 148, 149, 150, 151, 152, 158, 159, 160, 164, 167], "conveni": [1, 29, 34, 36, 38, 39, 42, 47, 55, 84, 91, 93, 96, 98, 100, 108, 167, 170], "pyclaw": [1, 3, 4, 12, 17, 25, 26, 29, 30, 31, 46, 47, 59, 60, 61, 77, 78, 84, 85, 95, 99, 101, 107, 111, 138, 140, 141, 146], "plotter": [1, 3, 29, 84], "frametool": [1, 29, 84, 118, 130], "printfram": [1, 81], "still": [1, 5, 7, 8, 13, 16, 18, 19, 24, 26, 28, 34, 42, 45, 47, 49, 55, 56, 67, 70, 71, 77, 81, 86, 97, 104, 110, 115, 116, 118, 123, 124, 125, 126, 127, 128, 130, 135, 137, 139, 140, 151, 158], "clawplotdata": [2, 3, 29, 47, 55, 82, 84, 91, 147], "next": [2, 3, 6, 13, 20, 36, 38, 40, 47, 58, 71, 77, 82, 84, 87, 88, 96, 97, 99, 104, 108, 113, 115, 116, 118, 135, 136, 137, 148, 149, 151], "unus": [2, 97], "1001": 2, "figsiz": [2, 42, 70, 82, 136, 142, 147], "tupl": [2, 3, 32, 51, 63, 75, 82, 94, 97, 98, 164], "size": [2, 22, 32, 36, 37, 42, 47, 55, 63, 76, 77, 81, 94, 97, 99, 104, 125, 130, 135, 149, 150, 152, 154, 162, 164], "facecolor": [2, 82, 118, 136, 147], "background": [2, 81, 127, 147], "behind": [2, 42, 70, 144, 151], "By": [2, 15, 32, 44, 49, 51, 55, 57, 63, 75, 82, 84, 88, 94, 98, 100, 107, 127, 142, 145, 156, 157, 164, 170], "theme": 2, "tan": [2, 82], "public": [2, 4, 13, 17, 23, 138], "probabl": [2, 13, 30, 55, 68, 70, 110, 111], "w": [2, 17, 51, 140, 170], "white": [2, 63, 118], "keyword": [2, 3, 82, 88, 93, 94, 97, 103, 109, 116, 127, 147, 158, 164], "12": [2, 34, 42, 55, 70, 82, 142, 147], "5": [2, 4, 5, 8, 9, 11, 13, 18, 19, 21, 27, 32, 34, 35, 36, 37, 41, 42, 45, 47, 49, 51, 55, 56, 57, 58, 59, 63, 64, 66, 67, 68, 70, 75, 82, 92, 94, 98, 99, 101, 102, 104, 110, 111, 115, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 148, 149, 150, 151, 152, 158, 161, 162, 164, 169], "would": [2, 3, 12, 13, 16, 26, 29, 30, 34, 36, 41, 44, 55, 57, 59, 62, 64, 66, 67, 70, 72, 75, 77, 82, 86, 88, 91, 94, 98, 109, 116, 125, 142, 143, 144, 147, 148, 151, 158, 162, 167], "inch": [2, 55, 63, 82, 147], "red": [2, 3, 30, 47, 63, 82, 116, 147], "option": [2, 12, 13, 16, 19, 22, 24, 27, 30, 31, 32, 34, 36, 37, 38, 39, 43, 44, 51, 54, 57, 60, 62, 66, 71, 77, 81, 82, 88, 89, 91, 93, 94, 95, 97, 98, 100, 103, 104, 105, 108, 109, 111, 112, 115, 116, 118, 120, 123, 124, 125, 128, 130, 133, 135, 137, 142, 146, 147, 148, 150, 151, 152, 153, 158, 164], "clf_each_fram": 2, "clf": 2, "axes1": [2, 84], "shown": [3, 13, 18, 19, 58, 63, 67, 68, 71, 78, 98, 118, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 142, 164, 167], "fragment": 3, "typic": [3, 22, 42, 66, 67, 71, 72, 75, 77, 78, 84, 89, 99, 101, 104, 106, 115, 149, 150, 161, 162, 165, 166, 167, 170], "assum": [3, 5, 22, 24, 32, 34, 36, 37, 39, 42, 49, 51, 52, 55, 57, 58, 59, 63, 71, 75, 81, 97, 98, 100, 101, 102, 108, 109, 115, 123, 136, 142, 143, 148, 151, 158, 159, 162, 164, 166, 170], "instanc": [3, 30, 37, 55, 75, 78, 84, 88, 89, 91, 94, 97, 98, 101, 142, 151], "type": [3, 4, 7, 13, 17, 18, 22, 30, 32, 38, 39, 43, 47, 48, 55, 66, 71, 82, 83, 84, 88, 89, 90, 92, 94, 97, 99, 100, 104, 105, 108, 109, 142, 149, 150, 151, 158, 159, 162, 164, 170], "dimension": [3, 7, 8, 17, 19, 24, 27, 32, 34, 36, 38, 39, 47, 49, 52, 56, 71, 94, 101, 123, 124, 126, 129, 150, 151, 152, 164, 167], "point": [3, 5, 6, 13, 15, 16, 17, 22, 30, 32, 35, 36, 38, 39, 41, 42, 44, 47, 48, 49, 50, 51, 52, 55, 57, 58, 59, 61, 62, 63, 64, 71, 72, 75, 88, 98, 99, 103, 109, 110, 111, 115, 118, 126, 128, 130, 136, 139, 140, 142, 143, 144, 145, 146, 148, 149, 150, 151, 156, 157, 158, 162, 164, 165, 167], "slice": [3, 49, 71, 140], "scatter": [3, 24, 71], "radial": [3, 18, 34, 49, 51, 151, 167], "symmetr": [3, 49, 51, 167], "between": [3, 4, 5, 6, 13, 16, 25, 27, 30, 32, 33, 34, 36, 37, 41, 51, 55, 59, 63, 70, 71, 72, 75, 76, 78, 81, 91, 94, 98, 104, 106, 107, 109, 110, 111, 115, 118, 124, 125, 140, 142, 143, 148, 149, 150, 151, 152, 153, 154, 161, 162, 164, 166, 167], "plot_var": [3, 29, 47, 55, 82, 83], "fill_var2": 3, "diment": 3, "raster": [3, 55, 57, 135, 162], "contour": [3, 32, 47, 55, 57, 71, 110, 147, 164], "pcolor": [3, 47, 81, 110, 118, 135, 164], "2d_schlieren": 3, "schlieren": [3, 71], "2d_patch": [3, 24], "cell": [3, 4, 5, 7, 8, 15, 16, 18, 19, 22, 24, 27, 29, 34, 35, 36, 37, 47, 48, 49, 55, 57, 63, 70, 71, 72, 76, 77, 78, 88, 94, 97, 99, 102, 104, 106, 108, 115, 119, 120, 124, 125, 126, 127, 128, 129, 130, 132, 136, 140, 143, 144, 145, 148, 149, 150, 152, 154, 159, 161, 162, 167, 170], "patch": [3, 6, 7, 16, 19, 24, 29, 34, 42, 55, 71, 75, 76, 77, 81, 82, 97, 99, 103, 106, 115, 125, 127, 130, 132, 144, 147, 149, 161, 162, 167], "edg": [3, 6, 15, 16, 19, 29, 32, 34, 35, 36, 37, 41, 49, 63, 75, 94, 102, 140, 142, 145, 149, 150, 152, 167], "hillshad": [3, 118], "come": [3, 30, 82, 84, 93, 99, 104, 123, 162, 167], "parent": [3, 29, 94, 106, 109], "integ": [3, 34, 35, 36, 47, 55, 63, 68, 70, 82, 89, 97, 103, 115, 118, 126, 129, 140, 148, 151, 158, 164], "compon": [3, 16, 19, 22, 24, 27, 39, 47, 61, 62, 71, 77, 81, 101, 103, 105, 106, 115, 123, 132, 141, 148, 149, 150, 162, 167], "correspond": [3, 6, 12, 25, 27, 29, 32, 35, 36, 37, 47, 49, 51, 52, 57, 58, 59, 63, 71, 75, 82, 88, 92, 94, 97, 98, 101, 103, 106, 115, 116, 140, 142, 143, 148, 149, 150, 151, 152, 158, 162, 166, 167], "appli": [3, 4, 5, 6, 13, 16, 17, 19, 27, 32, 52, 55, 57, 68, 70, 75, 82, 84, 92, 94, 97, 104, 115, 139, 148, 151, 167], "comput": [3, 4, 5, 6, 13, 16, 17, 18, 19, 29, 31, 32, 34, 35, 36, 37, 42, 47, 49, 51, 55, 57, 62, 63, 64, 66, 72, 75, 81, 82, 84, 89, 91, 94, 96, 97, 98, 99, 104, 108, 111, 113, 115, 118, 119, 120, 124, 125, 129, 132, 135, 137, 140, 144, 148, 150, 151, 152, 159, 162, 167, 170], "signatur": [3, 89, 92, 94, 95, 97, 102, 158], "hold": [3, 37, 84, 108, 115], "current": [3, 5, 13, 14, 19, 22, 24, 26, 29, 30, 31, 32, 34, 37, 41, 42, 44, 47, 48, 49, 52, 57, 58, 59, 61, 62, 63, 64, 71, 73, 77, 82, 84, 94, 97, 98, 99, 104, 106, 109, 111, 115, 116, 118, 124, 126, 127, 137, 139, 143, 147, 148, 149, 150, 151, 152, 154, 158, 159, 162, 164, 166], "afteritem": [3, 29], "afterpatch": [3, 29], "There": [3, 6, 13, 24, 36, 39, 43, 55, 58, 59, 66, 70, 75, 77, 84, 85, 98, 105, 113, 126, 127, 147, 148, 154, 159, 160, 167, 169], "calcul": [3, 5, 6, 18, 19, 29, 32, 35, 37, 48, 51, 71, 75, 82, 94, 102, 104, 118, 120, 125, 164], "cd": [3, 13, 30, 38, 39, 40, 56, 58, 59, 61, 62, 84, 93, 96, 99, 105, 116, 160], "On": [3, 5, 13, 55, 76, 85, 126, 136, 142, 146, 167], "ylower": [3, 24, 29, 42, 89, 127, 150, 162, 164], "patchno": [3, 29], "out": [3, 16, 17, 26, 28, 31, 32, 34, 36, 37, 38, 39, 42, 47, 48, 49, 54, 56, 57, 58, 59, 62, 63, 64, 65, 66, 71, 75, 82, 85, 86, 88, 89, 91, 97, 98, 99, 100, 103, 108, 110, 111, 113, 116, 125, 127, 129, 130, 140, 142, 149, 150, 152, 158, 164, 165], "lower": [3, 24, 32, 34, 35, 41, 49, 57, 70, 77, 94, 99, 142, 144, 148, 150, 152, 162, 164, 166], "left": [3, 5, 10, 13, 16, 20, 27, 29, 32, 34, 57, 77, 84, 94, 101, 102, 108, 118, 126, 132, 135, 136, 137, 138, 139, 140, 143, 149, 162, 164, 166, 170], "mappedgrid": [3, 71], "map": [3, 16, 18, 31, 32, 42, 48, 63, 70, 71, 82, 86, 89, 94, 96, 101, 115, 123, 127, 132, 141, 164, 170], "mapc2p": [3, 27, 29, 49, 71, 89, 94, 132], "underli": [3, 55, 125], "requir": [3, 4, 16, 18, 19, 22, 24, 27, 29, 30, 32, 34, 36, 37, 38, 39, 43, 48, 49, 51, 52, 59, 62, 70, 71, 75, 78, 81, 84, 85, 88, 89, 94, 97, 100, 101, 104, 105, 106, 108, 109, 110, 115, 116, 118, 119, 120, 123, 125, 128, 130, 132, 135, 137, 140, 141, 142, 147, 148, 149, 150, 151, 152, 158, 159, 162, 165, 168, 170], "depend": [3, 13, 16, 30, 31, 32, 34, 37, 38, 39, 43, 44, 50, 52, 55, 66, 68, 71, 75, 82, 87, 97, 102, 103, 104, 109, 111, 115, 127, 144, 149, 151, 164, 165, 167, 170], "summar": [3, 30, 33, 115, 117, 167], "plotstyl": [3, 47, 82, 147], "anyth": [3, 6, 30, 31, 62, 67, 116, 127], "valid": [3, 52, 75, 91, 98, 103, 106, 125, 151, 158, 159, 164], "fmt": 3, "group": [3, 13, 26, 30, 32, 52, 93, 97, 99, 107, 124, 140], "solid": [3, 16, 55, 75, 101, 147, 148, 150, 152], "dash": [3, 99], "o": [3, 5, 17, 41, 42, 43, 70, 72, 82, 85, 86, 89, 97, 98, 107, 127, 150, 164, 167], "circl": [3, 51, 82, 118], "bo": 3, "blue": [3, 11, 42, 47, 63, 70, 82, 142, 164], "though": [3, 42, 78, 158, 162], "also": [3, 4, 5, 6, 7, 8, 9, 11, 12, 16, 17, 18, 19, 20, 22, 24, 25, 26, 27, 30, 31, 32, 34, 35, 36, 37, 38, 39, 40, 41, 42, 44, 45, 46, 47, 48, 49, 51, 52, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 66, 67, 70, 71, 75, 76, 77, 78, 81, 82, 84, 88, 90, 91, 94, 96, 97, 98, 99, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 118, 119, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 146, 148, 149, 150, 151, 152, 153, 156, 157, 158, 159, 160, 161, 162, 164, 165, 166, 167, 169, 170], "overrul": 3, "r": [3, 4, 6, 17, 30, 47, 51, 56, 58, 70, 71, 74, 82, 88, 92, 99, 101, 118, 140, 142, 147, 164, 170], "ff0000": [3, 63], "No": [3, 43, 55, 59, 71, 94, 104, 133, 140, 148, 151, 165], "extra": [3, 55, 141], "give": [3, 6, 9, 10, 13, 16, 17, 18, 19, 26, 30, 32, 34, 35, 36, 38, 39, 47, 49, 56, 63, 64, 70, 72, 75, 76, 77, 82, 84, 99, 100, 104, 116, 120, 124, 125, 129, 132, 142, 148, 151, 162, 164, 166], "polygon": [3, 7, 41, 55, 63, 130, 164], "curv": [3, 47, 81, 142], "fill_between": 3, "plot_var2": 3, "zero": [3, 16, 32, 34, 42, 44, 47, 63, 71, 72, 88, 101, 102, 106, 108, 132, 142, 143], "fill_wher": 3, "plotitem": [3, 29, 47, 82, 147], "mean": [3, 13, 24, 30, 34, 42, 47, 52, 56, 62, 71, 72, 98, 99, 115, 118, 140, 143, 148, 150, 152, 166], "map_2d_to_1d": 3, "In": [3, 5, 6, 8, 11, 12, 15, 16, 18, 19, 21, 22, 24, 29, 32, 34, 36, 41, 44, 47, 48, 49, 52, 55, 56, 57, 58, 59, 62, 63, 64, 66, 67, 70, 71, 72, 74, 75, 77, 78, 82, 83, 84, 88, 89, 94, 96, 97, 98, 99, 100, 101, 102, 104, 106, 109, 111, 112, 113, 115, 118, 119, 120, 123, 124, 125, 127, 128, 132, 136, 139, 140, 142, 144, 145, 146, 148, 149, 151, 156, 157, 162, 164, 165, 167, 170], "about": [3, 5, 7, 13, 14, 16, 18, 19, 24, 27, 35, 36, 37, 38, 39, 43, 49, 51, 52, 57, 59, 63, 66, 68, 71, 77, 83, 85, 88, 96, 97, 99, 104, 111, 116, 124, 128, 130, 135, 136, 140, 147, 149, 150, 151, 162, 165, 167, 170], "j": [3, 4, 5, 15, 17, 22, 24, 29, 35, 42, 56, 63, 70, 71, 77, 84, 96, 97, 115, 119, 120, 144, 145], "v": [3, 16, 27, 31, 32, 34, 36, 37, 51, 64, 67, 116, 124, 149, 162], "radiu": [3, 151, 158, 159, 164], "q0_vs_radiu": 3, "convert": [3, 24, 27, 32, 35, 37, 45, 51, 55, 62, 63, 66, 75, 78, 89, 96, 101, 109, 110, 127, 130, 136, 137, 148, 149, 158, 162, 166], "numpi": [3, 13, 32, 34, 36, 37, 42, 51, 70, 85, 87, 88, 89, 91, 94, 101, 106, 107, 108, 110, 116, 137, 141, 142, 150, 164, 165], "sqrt": [3, 34, 37, 49, 68, 88, 101, 102, 108, 150], "q0": [3, 101], "work": [3, 5, 8, 13, 16, 19, 21, 22, 24, 26, 27, 28, 30, 31, 34, 36, 38, 39, 43, 48, 52, 55, 56, 57, 58, 59, 60, 61, 62, 63, 70, 71, 74, 75, 76, 82, 85, 86, 87, 88, 90, 91, 92, 96, 97, 98, 99, 102, 104, 105, 110, 111, 113, 114, 115, 116, 118, 121, 122, 123, 124, 125, 126, 127, 130, 132, 133, 138, 140, 146, 147, 148, 149, 153, 159, 162, 165, 169], "symbol": [3, 71, 111], "best": [3, 4, 16, 24, 28, 30, 36, 44, 49, 55, 57, 59, 60, 66, 72, 74, 76, 81, 82, 97, 101, 113, 114, 115, 116, 127, 138, 140, 151, 155, 158, 162, 167], "descript": [3, 4, 6, 9, 24, 25, 27, 32, 36, 37, 63, 71, 75, 78, 81, 96, 97, 109, 113, 115, 137, 140, 141, 151, 158, 162, 170], "celledges_show": [3, 24], "draw": 3, "amr_celledges_show": 3, "level": [3, 6, 7, 16, 19, 25, 29, 31, 34, 36, 41, 42, 47, 48, 50, 51, 52, 55, 58, 59, 61, 62, 71, 72, 76, 77, 89, 91, 94, 96, 97, 98, 104, 111, 112, 115, 116, 119, 120, 124, 125, 127, 130, 139, 142, 143, 146, 148, 149, 150, 152, 161, 162, 164, 166, 167], "patchedges_show": [3, 24], "mostli": [3, 81, 96, 130, 137], "contour_level": [3, 164], "three": [3, 13, 17, 24, 32, 34, 37, 52, 55, 67, 71, 75, 99, 103, 109, 116, 142, 148, 151, 162, 164, 167], "contour_nlevel": 3, "contour_min": 3, "minimum": [3, 19, 34, 47, 55, 75, 108, 125, 151, 164], "contour_max": 3, "maximum": [3, 24, 32, 34, 35, 36, 48, 71, 72, 104, 108, 115, 119, 120, 127, 130, 148, 149, 150, 152, 158, 159], "contour_color": 3, "specif": [3, 5, 12, 19, 24, 30, 32, 47, 48, 49, 51, 55, 56, 62, 65, 67, 68, 77, 86, 87, 89, 91, 96, 97, 98, 102, 103, 109, 113, 125, 126, 127, 130, 147, 148, 149, 150, 152, 159, 162], "b": [3, 5, 17, 30, 32, 34, 35, 36, 37, 42, 47, 49, 56, 58, 59, 68, 72, 82, 104, 115, 123, 130, 142, 143, 144, 151, 164, 166], "0000ff": [3, 63], "colormap": [3, 32, 42, 50, 55, 70, 71, 81, 83, 124, 130, 164], "amr_contour_color": 3, "As": [3, 18, 19, 39, 42, 48, 49, 52, 58, 59, 63, 64, 88, 108, 110, 114, 118, 119, 130, 140, 141, 144, 151, 154, 160, 167], "black": [3, 47], "subsequ": [3, 10, 71], "both": [3, 16, 18, 19, 30, 32, 35, 36, 37, 38, 39, 41, 42, 47, 52, 57, 60, 62, 67, 70, 71, 75, 77, 89, 97, 98, 99, 104, 105, 115, 116, 123, 124, 127, 130, 135, 140, 141, 142, 144, 148, 149, 150, 152, 156, 162, 167], "fine": [3, 19, 34, 35, 36, 42, 49, 58, 74, 78, 96, 101, 115, 118, 125, 132, 142, 144, 148, 149, 151, 162, 167], "coars": [3, 34, 36, 55, 115, 118, 125, 132, 148, 162, 167], "anoth": [3, 19, 24, 34, 36, 42, 47, 51, 55, 62, 63, 77, 81, 85, 93, 104, 107, 116, 127, 158, 167], "refin": [3, 4, 5, 7, 8, 17, 19, 24, 36, 48, 49, 52, 55, 56, 57, 70, 71, 77, 78, 88, 125, 127, 128, 130, 132, 142, 144, 147, 148, 149, 150, 161, 162, 167], "region": [3, 6, 7, 13, 16, 19, 24, 34, 36, 41, 42, 48, 52, 53, 55, 63, 68, 72, 75, 78, 113, 118, 127, 130, 132, 143, 144, 149, 150, 154, 162, 164], "lack": 3, "hidden": [3, 66, 82], "blank": [3, 35, 63, 158], "coarser": [3, 16, 19, 57, 125, 144, 148, 149, 167], "easili": [3, 13, 30, 34, 55, 58, 71, 82, 89, 94, 105, 109, 116, 118, 130, 153], "contour_show": 3, "commonli": [3, 19, 71, 82, 84], "amr_contour_show": 3, "determin": [3, 5, 6, 32, 34, 37, 42, 47, 48, 49, 52, 54, 55, 58, 63, 72, 75, 82, 92, 94, 97, 102, 106, 111, 115, 120, 124, 125, 139, 142, 143, 147, 148, 149, 151, 164, 167], "whether": [3, 6, 13, 16, 24, 51, 57, 60, 62, 64, 65, 66, 71, 86, 94, 97, 98, 102, 103, 104, 115, 116, 125, 140, 142, 148, 149, 151, 164], "view": [3, 4, 24, 36, 38, 39, 47, 48, 49, 51, 55, 57, 58, 63, 77, 81, 83, 84, 88, 99, 105, 110, 123, 127, 153, 155], "finest": [3, 19, 34, 36, 42, 47, 72, 127, 161, 164], "contour_kwarg": [3, 164], "pcolor_cmap": [3, 55], "pcolor_cmin": 3, "pcolor_cmax": 3, "thei": [3, 5, 6, 13, 16, 18, 19, 26, 29, 30, 32, 34, 36, 41, 42, 45, 47, 49, 52, 55, 58, 59, 62, 63, 64, 67, 70, 71, 77, 81, 94, 96, 101, 104, 109, 115, 116, 125, 132, 144, 147, 151, 154, 158, 162, 164, 167], "chosen": [3, 31, 34, 41, 42, 49, 55, 57, 70, 108, 115, 132, 143, 149], "vari": [3, 15, 17, 27, 32, 42, 48, 49, 57, 68, 72, 101, 103, 123, 130, 140, 141, 143, 145, 149, 151, 170], "yield": [3, 18, 19], "veri": [3, 5, 16, 17, 18, 19, 24, 49, 52, 55, 59, 60, 63, 75, 82, 86, 89, 97, 98, 99, 100, 101, 104, 116, 118, 120, 124, 135, 142, 144, 148, 159, 162], "confus": [3, 57, 62, 111, 132, 140], "add_colorbar": [3, 32, 164], "ad": [3, 12, 16, 22, 24, 26, 27, 29, 31, 34, 36, 37, 44, 47, 51, 57, 58, 59, 62, 63, 64, 68, 71, 72, 75, 82, 87, 89, 92, 94, 95, 98, 99, 111, 112, 113, 115, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 133, 135, 136, 137, 139, 144, 148, 149, 151, 154, 158, 161, 164, 168], "imshow_cmap": 3, "imshow_cmin": 3, "imshow_cmax": 3, "hillshade_vertical_exagger": 3, "vertic": [3, 32, 41, 52, 55, 63, 70, 142, 143, 151, 164, 166], "exagger": 3, "calul": 3, "hillshade_azimuth_degre": 3, "light": [3, 55, 71, 115], "sourc": [3, 4, 17, 18, 19, 25, 27, 30, 32, 44, 48, 49, 55, 56, 58, 59, 61, 62, 63, 65, 67, 68, 81, 86, 89, 93, 94, 95, 104, 105, 107, 108, 109, 113, 114, 116, 118, 125, 126, 127, 136, 137, 141, 143, 148, 150, 151, 152, 155, 156, 157, 158, 162], "azimuth": 3, "angl": [3, 16, 32, 51, 75], "315": 3, "northwest": 3, "360": [3, 51, 55, 75], "degre": [3, 32, 49, 51, 55, 63, 72, 75], "clockwis": [3, 34, 51, 75, 164], "north": [3, 34, 42, 49, 51, 70, 75], "recommend": [3, 4, 18, 19, 32, 34, 36, 38, 39, 58, 59, 60, 62, 76, 81, 90, 94, 96, 97, 99, 100, 104, 105, 107, 108, 115, 127, 135, 137, 148, 150, 152, 168], "proper": [3, 6, 15, 42, 47, 56, 57, 58, 59, 63, 68, 70, 71, 97, 109, 119, 125, 145, 149, 150, 156, 157, 158, 167], "interpret": [3, 32, 57, 75, 97, 127, 162], "peopl": [3, 4, 12, 13, 86], "hillshade_altitude_degre": 3, "altitud": 3, "horizon": 3, "45": [3, 104], "90": [3, 27, 32, 49, 55, 67, 75, 105, 107, 136], "hillshade_latlon": 3, "correct": [3, 18, 19, 22, 30, 44, 58, 59, 67, 68, 71, 82, 88, 94, 97, 99, 103, 109, 119, 120, 124, 144, 148, 150, 151, 152], "unit": [3, 32, 49, 50, 51, 56, 75, 94, 125, 136, 158], "z": [3, 42, 57, 63, 70, 71, 88, 94, 102, 108, 142, 148, 149, 162, 164], "111200": 3, "reflect": [3, 4, 5, 16, 30, 115, 127, 148, 150, 152], "relat": [3, 7, 19, 24, 26, 58, 78, 102, 113, 126, 130, 132, 143], "pre": [3, 13, 35, 59, 90, 97], "pend": 3, "amr_": [3, 7], "whose": [3, 49, 82, 89, 101, 102, 144, 148, 149, 164], "origin": [3, 6, 13, 16, 18, 19, 22, 30, 32, 36, 37, 45, 47, 56, 58, 63, 70, 76, 77, 89, 104, 109, 119, 125, 132, 139, 149, 150, 151, 152, 164], "hand": [3, 5, 19, 20, 21, 22, 68, 88, 116, 118, 135, 136, 137, 142], "higher": [3, 6, 18, 19, 55, 94, 104, 105, 115, 130, 140, 142, 143, 144], "shorter": [3, 115, 164], "last": [3, 20, 29, 34, 36, 59, 61, 82, 88, 89, 101, 108, 118, 124, 135, 136, 137, 148, 158], "repeatedli": [3, 99, 105, 149], "finer": [3, 7, 19, 34, 55, 115, 119, 120, 142, 148, 149], "celledg": [3, 32, 49], "colorbar_shrink": [3, 32], "colorbar_label": 3, "colorbar_tick": 3, "colorbar_tick_label": 3, "colorbar_extend": [3, 136], "colorbar_kwarg": [3, 127], "stand": [4, 132], "conserv": [4, 5, 6, 17, 18, 19, 98, 104, 106, 128, 141, 167, 170], "law": [4, 17, 63, 151, 170], "packag": [4, 27, 30, 31, 38, 39, 55, 59, 60, 67, 77, 78, 81, 85, 86, 88, 94, 96, 98, 100, 101, 103, 105, 108, 110, 111, 118, 129, 130, 165, 168], "wa": [4, 5, 6, 14, 19, 21, 22, 27, 31, 32, 34, 35, 36, 37, 42, 49, 52, 54, 58, 59, 66, 68, 70, 71, 75, 82, 99, 103, 104, 106, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 139, 142, 144, 161, 162, 164], "initi": [4, 5, 7, 12, 13, 18, 19, 24, 27, 32, 36, 37, 47, 48, 49, 51, 52, 55, 59, 64, 67, 71, 72, 75, 77, 78, 84, 86, 87, 88, 89, 91, 92, 94, 95, 97, 98, 102, 103, 104, 106, 107, 109, 112, 115, 124, 127, 130, 132, 140, 143, 148, 149, 150, 152, 154, 158, 162, 164], "develop": [4, 6, 7, 12, 13, 19, 20, 24, 25, 45, 52, 56, 58, 61, 62, 65, 70, 71, 81, 85, 86, 89, 96, 101, 104, 105, 111, 113, 116, 118, 127, 128, 130, 132, 135, 136, 137, 140, 143, 144, 150], "linear": [4, 5, 17, 18, 19, 32, 36, 37, 47, 49, 55, 72, 75, 82, 88, 92, 104, 118, 128, 140, 141, 142], "nonlinear": [4, 5, 17, 52, 92, 140, 148, 170], "hyperbol": [4, 5, 6, 17, 18, 19, 45, 78, 89, 96, 101, 102, 108, 140, 148, 151, 167, 170], "system": [4, 16, 17, 18, 19, 25, 39, 40, 48, 55, 56, 62, 63, 67, 76, 77, 86, 96, 97, 98, 99, 101, 102, 105, 108, 111, 116, 118, 140, 148, 150, 152, 160, 167, 170], "focu": [4, 48], "high": [4, 17, 34, 52, 55, 70, 72, 75, 78, 89, 96, 104, 140, 143, 144, 166, 167], "resolut": [4, 6, 17, 32, 34, 36, 42, 47, 64, 72, 75, 94, 104, 108, 109, 119, 123, 127, 128, 135, 140, 143, 162, 164, 166, 167], "godunov": [4, 94, 104, 148, 150, 152, 167], "method": [4, 5, 7, 17, 19, 34, 36, 37, 41, 45, 47, 57, 70, 72, 82, 84, 88, 91, 92, 94, 99, 103, 104, 109, 115, 116, 123, 140, 147, 148, 149, 150, 152, 158, 161, 162, 164, 167], "framework": [4, 86, 89, 124, 125], "applic": [4, 6, 15, 16, 18, 19, 21, 22, 24, 25, 26, 30, 31, 36, 37, 38, 39, 40, 44, 45, 46, 47, 48, 50, 59, 61, 62, 67, 70, 76, 77, 84, 93, 94, 95, 96, 98, 104, 109, 112, 114, 115, 116, 118, 119, 122, 123, 125, 126, 127, 129, 130, 140, 142, 144, 145, 148, 151, 156, 157, 162, 164, 165, 167, 168], "finit": [4, 17, 34, 36, 45, 49, 57, 63, 70, 71, 72, 75, 104, 130, 142, 151, 161, 162, 167], "volum": [4, 17, 31, 34, 36, 45, 49, 57, 63, 70, 71, 72, 96, 130, 142, 149, 151, 161, 162, 167], "riemann": [4, 5, 8, 22, 24, 25, 30, 31, 48, 59, 62, 67, 78, 86, 88, 94, 95, 104, 105, 106, 108, 111, 146, 148, 150, 152, 156, 157, 170], "solver": [4, 5, 6, 22, 24, 25, 27, 30, 48, 49, 60, 61, 62, 67, 85, 86, 87, 91, 94, 95, 98, 106, 118, 121, 123, 125, 126, 127, 128, 129, 130, 132, 137, 148, 150, 152, 156, 157, 170], "resolv": [4, 34, 36, 55, 58, 62, 113, 127, 144], "jump": [4, 5, 71, 84, 94, 104, 125, 148, 170], "discontinu": [4, 104, 170], "interfac": [4, 21, 24, 71, 86, 89, 92, 96, 97, 102, 104, 109, 140, 167, 168, 170], "wave": [4, 5, 6, 16, 17, 18, 27, 34, 42, 48, 49, 52, 55, 56, 75, 92, 94, 96, 101, 102, 104, 115, 123, 125, 126, 132, 141, 142, 143, 148, 149, 150, 151, 152, 154, 167], "propag": [4, 5, 6, 17, 18, 19, 27, 32, 49, 52, 55, 56, 75, 94, 96, 104, 115, 125, 140], "neighbor": [4, 18, 19, 36, 42, 70, 72, 115, 125, 144, 149, 150, 164], "formul": [4, 5, 19, 52, 68, 140, 148], "allow": [4, 6, 13, 24, 29, 30, 31, 34, 36, 37, 41, 42, 47, 48, 51, 54, 55, 57, 58, 62, 68, 70, 71, 75, 76, 78, 81, 82, 91, 96, 97, 98, 104, 106, 109, 110, 111, 115, 116, 119, 120, 123, 124, 125, 126, 127, 129, 130, 132, 135, 136, 137, 140, 142, 148, 150, 151, 152, 153, 158, 162, 164, 166], "easi": [4, 6, 11, 31, 41, 62, 71, 89, 98, 99, 100, 142, 153, 167], "extens": [4, 17, 19, 24, 26, 30, 32, 52, 55, 58, 62, 67, 71, 89, 96, 97, 109, 125, 126, 132, 148, 160, 164, 170], "problem": [4, 5, 7, 16, 17, 18, 19, 22, 26, 27, 29, 30, 31, 38, 39, 42, 45, 48, 49, 62, 66, 70, 71, 72, 75, 78, 82, 85, 87, 88, 93, 95, 96, 99, 102, 104, 107, 111, 116, 119, 120, 122, 123, 126, 130, 132, 136, 137, 140, 142, 144, 148, 149, 150, 151, 152, 153, 154, 161, 165], "algorithm": [4, 7, 19, 27, 34, 41, 42, 48, 56, 88, 94, 96, 97, 104, 108, 115, 127, 140, 142, 148, 150, 152, 164], "brief": [4, 59, 141, 151], "subroutin": [4, 6, 9, 16, 24, 34, 36, 67, 115, 123, 140, 148, 149, 161, 167, 170], "equat": [4, 5, 16, 17, 18, 27, 38, 39, 48, 49, 52, 64, 68, 82, 87, 88, 89, 91, 96, 97, 98, 101, 104, 105, 106, 118, 120, 123, 125, 127, 128, 140, 148, 150, 151, 152, 154, 162, 167, 170], "solv": [4, 5, 8, 16, 17, 18, 19, 22, 28, 38, 39, 49, 52, 60, 62, 64, 87, 89, 91, 94, 96, 101, 102, 105, 118, 128, 140, 141, 148, 162, 167, 170], "adapt": [4, 7, 17, 19, 32, 42, 49, 56, 57, 70, 71, 78, 88, 115, 127, 130, 132, 140, 142, 147, 148, 149, 151, 167], "mesh": [4, 7, 17, 19, 35, 49, 56, 70, 71, 78, 81, 88, 115, 130, 147, 148, 167], "amrclaw": [4, 5, 6, 12, 15, 16, 19, 21, 22, 24, 25, 26, 30, 38, 39, 41, 42, 44, 46, 47, 48, 50, 56, 59, 60, 61, 62, 64, 70, 71, 76, 77, 78, 85, 96, 97, 105, 111, 112, 115, 116, 139, 140, 142, 145, 146, 148, 151, 156, 157, 160, 161, 165], "detail": [4, 5, 10, 16, 24, 25, 27, 28, 30, 31, 32, 34, 36, 38, 39, 41, 44, 47, 50, 52, 55, 58, 61, 62, 64, 65, 66, 70, 71, 75, 78, 82, 86, 91, 92, 93, 94, 96, 97, 98, 99, 100, 101, 102, 104, 114, 115, 116, 120, 125, 127, 132, 135, 140, 142, 147, 148, 151, 153, 158, 162, 165, 166, 167, 170], "content": [4, 6, 25, 37, 45, 55, 59, 77, 78, 89, 96, 151, 162, 167, 168], "routin": [4, 5, 6, 16, 18, 19, 22, 27, 29, 32, 34, 38, 39, 47, 48, 49, 50, 55, 56, 66, 71, 72, 76, 77, 78, 81, 84, 86, 89, 91, 94, 97, 100, 101, 104, 106, 107, 115, 118, 119, 120, 123, 125, 127, 128, 130, 140, 144, 148, 150, 152, 158, 164, 165, 167, 168, 170], "special": [4, 7, 16, 48, 50, 55, 65, 78, 86, 97, 115, 135, 142, 164], "depth": [4, 5, 16, 17, 18, 19, 24, 32, 34, 35, 37, 42, 47, 48, 49, 52, 68, 72, 75, 81, 83, 141, 143, 144, 151, 162], "averag": [4, 6, 15, 17, 18, 19, 34, 42, 48, 49, 52, 53, 57, 71, 72, 102, 106, 120, 132, 140, 144, 145, 162, 164, 167], "geophys": [4, 16, 17, 25, 48, 52, 78, 148], "flow": [4, 16, 17, 25, 34, 35, 48, 50, 52, 78, 96, 113, 118, 130, 135, 140, 148, 151, 162, 167], "geoclaw": [4, 7, 12, 17, 18, 19, 25, 26, 30, 31, 32, 34, 35, 36, 37, 39, 41, 44, 46, 47, 56, 57, 59, 60, 61, 62, 63, 64, 68, 70, 72, 75, 77, 78, 81, 85, 96, 105, 111, 113, 114, 116, 139, 140, 141, 143, 144, 146, 148, 149, 154, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167], "parallel": [4, 24, 25, 47, 76, 87, 93, 95, 96, 98, 101, 103, 105, 109, 115, 116, 118, 125, 149], "ten": [4, 78], "thousand": [4, 78], "core": [4, 12, 78, 116, 127, 137], "wish": [4, 13, 14, 15, 24, 31, 38, 39, 52, 55, 62, 71, 80, 81, 96, 101, 104, 105, 107, 111, 113, 115, 125, 145, 153, 156, 157, 165], "discrib": 4, "book": [4, 12, 17, 27, 31, 46, 85, 103, 140], "levequ": [4, 16, 17, 26, 32, 56, 78, 92, 94, 96, 104, 110, 140, 148, 167, 170], "fvmhp": [4, 12, 16, 17, 27, 46, 78, 140, 148, 167, 170], "virtual": [4, 13, 27, 29, 106], "were": [4, 6, 14, 19, 22, 34, 45, 47, 58, 64, 67, 71, 72, 89, 115, 118, 119, 125, 128, 132, 135, 136, 137, 142, 144, 154, 162], "4": [4, 7, 8, 9, 13, 16, 17, 25, 27, 30, 32, 34, 35, 36, 39, 41, 42, 44, 45, 47, 48, 52, 55, 57, 58, 59, 66, 67, 68, 70, 71, 72, 76, 77, 81, 82, 84, 95, 96, 97, 98, 99, 101, 102, 104, 105, 109, 111, 115, 116, 118, 119, 124, 127, 132, 133, 135, 137, 139, 142, 148, 149, 150, 151, 152, 160, 161, 162, 164, 169], "3": [4, 6, 7, 15, 16, 19, 22, 24, 26, 27, 32, 34, 35, 36, 39, 41, 45, 47, 48, 55, 57, 59, 62, 63, 68, 71, 72, 75, 77, 82, 84, 85, 88, 91, 92, 94, 97, 98, 99, 102, 103, 104, 106, 110, 111, 115, 125, 127, 130, 136, 138, 140, 142, 145, 148, 149, 150, 151, 152, 160, 161, 162, 164, 167, 170], "pointer": [4, 16, 18, 19, 58, 75, 81, 84, 104, 109, 123], "code": [4, 5, 6, 7, 8, 12, 14, 16, 21, 22, 23, 24, 25, 26, 29, 31, 34, 35, 36, 37, 38, 39, 41, 43, 44, 45, 47, 48, 49, 52, 54, 56, 57, 58, 60, 65, 66, 67, 68, 74, 75, 76, 77, 78, 80, 82, 84, 85, 86, 88, 89, 94, 96, 97, 98, 99, 101, 104, 105, 108, 110, 111, 114, 117, 118, 119, 120, 123, 124, 125, 126, 127, 128, 129, 130, 132, 137, 139, 140, 141, 142, 146, 148, 149, 150, 151, 152, 153, 158, 160, 161, 162], "bibliographi": [4, 27], "paper": [4, 5, 6, 16, 19, 32, 48, 58, 92, 96], "distribut": [4, 12, 13, 31, 32, 58, 65, 75, 78, 86, 104, 110, 130], "under": [4, 7, 24, 34, 36, 40, 55, 56, 58, 61, 65, 67, 81, 86, 94, 96, 116, 125, 127, 138], "term": [4, 18, 19, 27, 48, 49, 52, 65, 75, 89, 94, 95, 104, 115, 118, 126, 127, 136, 137, 141, 148, 150, 151, 152, 156, 157], "berkelei": [4, 65, 86], "bsd": [4, 65, 86, 127], "contribut": [4, 26, 27, 61, 86, 89, 96, 101, 104, 113, 116], "its": [4, 6, 13, 18, 19, 24, 31, 34, 42, 52, 55, 65, 67, 70, 75, 77, 86, 91, 92, 93, 94, 96, 101, 103, 104, 106, 109, 115, 150, 164, 170], "incept": 4, "1994": [4, 65], "major": [4, 24, 59, 86, 89, 117, 119, 120, 121, 126, 128, 133, 136, 137], "design": [4, 29, 30, 55, 86, 88, 108, 142, 166], "made": [4, 19, 20, 24, 30, 32, 37, 62, 103, 106, 118, 119, 120, 125, 127, 130, 132, 135, 136, 137, 142, 144, 151, 159, 162, 164, 167], "individu": [4, 24, 25, 55, 63, 66, 67, 71, 94, 115, 116, 158], "randal": [4, 17, 96], "univers": [4, 17, 26, 58, 65, 86, 103], "washington": [4, 17, 26, 58, 65, 129, 142, 164], "rjlevequ": [4, 19, 30, 31], "marsha": [4, 6, 17], "berger": [4, 6, 17], "courant": [4, 6, 49, 115, 126, 148, 149, 150, 152], "institut": 4, "nyu": 4, "mjberger": 4, "jan": [4, 59], "olav": 4, "langseth": [4, 17], "norwegian": 4, "defenc": 4, "research": [4, 17, 48, 52, 86, 104, 114], "establish": 4, "david": [4, 17, 86, 96, 104], "georg": [4, 17, 32], "usg": [4, 32, 166], "cascad": 4, "volcano": 4, "observatori": 4, "dlgeorg": 4, "ketcheson": [4, 17, 79, 86, 96, 104], "kaust": [4, 26], "ketch": 4, "kyle": [4, 17, 86, 92, 96, 97, 102], "mandli": [4, 17, 86, 92, 96, 97, 102], "ut": 4, "austin": 4, "contributor": [4, 26, 65, 96], "aron": [4, 17, 86, 96], "ahmadia": [4, 17, 86, 96], "amal": [4, 17, 86, 96], "alghamdi": [4, 17, 86, 96], "ghamdi": 4, "ian": 4, "bollig": 4, "bolliger32": 4, "peter": 4, "blossei": 4, "donna": [4, 17], "calhoun": [4, 17, 55], "donnabois": 4, "ond\u0159ej": 4, "\u010dert\u00edk": 4, "certik": [4, 86], "brisa": 4, "davi": [4, 17], "brisadavi": [4, 128], "gradi": [4, 17, 86], "lemoin": [4, 17, 86], "gradylemoin": 4, "sorin": 4, "mitran": [4, 17], "matteo": [4, 17, 86, 96], "parsani": [4, 17, 86, 96], "mparsani": 4, "xinsheng": [4, 56], "qin": [4, 56], "xinshengqin": [4, 56], "avi": 4, "schwarzschild": 4, "aks2203": 4, "andi": 4, "terrel": 4, "aterrel": 4, "chri": 4, "vogl": 4, "cjvogl": 4, "numer": [4, 17, 55, 110, 128], "student": 4, "toward": [4, 32], "bug": [4, 8, 12, 24, 26, 44, 55, 68, 76, 82, 86, 118, 122, 123, 124, 125, 127, 132, 133, 134, 137], "suggest": [4, 18, 19, 26, 31, 51, 57, 58, 60, 62, 84, 85, 110, 138, 140, 151, 169], "improv": [4, 13, 24, 26, 34, 36, 55, 58, 97, 110, 118, 119, 120, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 148], "explor": [4, 36, 63, 82, 84], "thank": [4, 96], "pleas": [4, 26, 30, 58, 60, 61, 62, 86, 88, 91, 93, 96, 97, 99, 101, 103, 104, 105, 107, 113, 127, 132, 138, 140, 158], "itself": [4, 75, 81, 110, 130, 140, 151, 164], "well": [4, 6, 19, 30, 35, 48, 49, 55, 56, 58, 62, 63, 70, 75, 76, 77, 78, 81, 84, 85, 103, 104, 113, 126, 127, 130, 135, 141, 144, 148, 149, 156, 157, 158, 167, 170], "citat": [4, 19, 59], "similar": [4, 13, 16, 18, 30, 34, 36, 39, 47, 49, 55, 64, 88, 89, 97, 101, 104, 108, 127, 132, 151, 158, 159, 160, 162], "team": [4, 26, 65], "2024": [4, 20, 138], "10": [4, 17, 18, 19, 30, 32, 34, 36, 42, 49, 55, 56, 57, 59, 61, 62, 82, 88, 91, 94, 115, 124, 125, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 142, 148, 149, 150, 152, 154, 162], "http": [4, 12, 13, 17, 19, 26, 28, 30, 31, 32, 42, 51, 55, 56, 58, 59, 61, 62, 65, 70, 75, 85, 86, 89, 90, 97, 99, 101, 110, 111, 118, 122, 124, 125, 126, 128, 129, 132, 133, 134, 135, 136, 137, 138, 141, 158, 164], "www": [4, 13, 17, 32, 42, 48, 58, 65, 70, 86, 89, 94, 97, 99, 118, 126, 128, 135, 136, 158, 164], "org": [4, 17, 19, 48, 56, 58, 59, 65, 86, 89, 90, 94, 97, 99, 110, 111, 118, 124, 126, 128, 132, 133, 134, 135, 136, 137, 164], "doi": [4, 17, 56, 59, 61, 118, 130, 131, 132, 133, 134, 135, 136, 137, 138], "5281": [4, 59, 118, 130, 131, 132, 133, 134, 135, 136, 137, 138], "zenodo": [4, 61, 118, 130, 131, 132, 133, 134, 135, 136, 137, 138], "10896214": [4, 138], "here": [4, 13, 16, 18, 19, 31, 36, 41, 42, 52, 59, 62, 63, 70, 78, 82, 84, 88, 91, 96, 97, 99, 101, 102, 107, 108, 111, 113, 115, 123, 140, 141, 142, 159, 164, 170], "bibtex": [4, 59], "misc": [4, 129, 131], "url": [4, 12, 17, 55, 59, 127, 128, 162, 164], "year": [4, 17, 24, 55, 63, 96, 117, 128, 158], "releas": [4, 19, 20, 24, 27, 30, 31, 46, 49, 55, 60, 61, 62, 90, 96, 97, 104, 105, 110], "refer": [4, 5, 19, 22, 32, 34, 35, 36, 38, 39, 41, 48, 50, 55, 59, 66, 67, 71, 75, 88, 92, 94, 97, 98, 102, 104, 106, 111, 113, 127, 129, 139, 140, 142, 151, 158, 162, 164, 166, 167], "particular": [4, 6, 12, 22, 24, 30, 32, 34, 44, 47, 48, 50, 52, 55, 56, 59, 65, 66, 67, 71, 78, 82, 83, 85, 86, 88, 102, 103, 104, 106, 108, 113, 114, 115, 116, 118, 120, 123, 124, 125, 126, 127, 129, 130, 132, 147, 158, 159, 170], "obtain": [4, 6, 12, 34, 46, 47, 49, 50, 52, 62, 63, 72, 97, 98, 99, 115, 118, 132, 140, 144, 153, 162, 170], "your": [4, 6, 15, 16, 18, 19, 21, 22, 26, 27, 28, 36, 38, 40, 44, 47, 57, 58, 59, 60, 61, 62, 76, 81, 82, 84, 86, 87, 88, 89, 90, 93, 95, 96, 97, 98, 107, 108, 110, 111, 112, 113, 115, 116, 119, 127, 137, 140, 145, 146, 156, 157, 162, 165, 167], "multipl": [4, 5, 6, 13, 25, 30, 34, 35, 42, 47, 81, 88, 94, 97, 98, 109, 111, 116, 119, 125, 129, 139, 140, 149, 158, 159], "past": [4, 23, 27, 58, 64, 70, 103, 125, 128, 132, 138, 142, 143, 151], "17605": [4, 59, 138], "osf": [4, 138], "io": [4, 58, 59, 85, 98, 103, 138], "kmw6h": [4, 59, 138], "recent": [4, 13, 24, 29, 32, 49, 54, 58, 61, 66, 68, 76, 82, 84, 85, 118, 124, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 140, 154, 166], "articl": [4, 17, 96, 153], "l": [4, 7, 17, 34, 43, 61, 115, 140, 146, 150], "hadjimichael": [4, 17, 86], "2016": [4, 17, 26, 58], "build": [4, 17, 30, 31, 58, 59, 62, 71, 89, 99, 109, 126, 137, 142], "open": [4, 13, 17, 27, 30, 31, 32, 51, 55, 63, 81, 86, 90, 94, 97, 109, 142, 146, 166, 168], "ecosystem": [4, 17], "pde": [4, 5, 17, 60, 61, 62, 78, 85, 96, 108, 148, 167], "peerj": [4, 17], "scienc": [4, 17, 86], "7717": [4, 17], "c": [4, 16, 17, 30, 31, 32, 44, 55, 63, 65, 82, 86, 88, 89, 94, 102, 107, 108, 140], "68": [4, 17], "mandli2016clawpack": [4, 17], "yianni": [4, 17, 86], "journal": [4, 17, 56, 96, 153], "e68": [4, 17], "publish": [4, 17, 58, 96], "inc": [4, 17, 71], "least": [4, 5, 6, 13, 37, 47, 55, 63, 64, 70, 71, 107, 115, 116, 124, 125, 132, 148, 150, 154, 162, 164], "regard": [4, 41, 124, 158], "click": [4, 12, 13, 20, 30, 55, 58, 59, 116, 118, 126, 135, 136, 137, 138], "link": [4, 11, 13, 15, 17, 20, 21, 22, 26, 27, 30, 34, 36, 44, 45, 48, 55, 56, 57, 58, 59, 61, 63, 110, 111, 112, 118, 126, 135, 136, 137, 138, 140, 141, 143, 145, 152, 156, 157, 162, 166], "classic": [4, 6, 12, 15, 16, 21, 22, 24, 25, 26, 30, 44, 45, 46, 50, 59, 60, 61, 62, 67, 74, 76, 77, 78, 85, 86, 88, 91, 93, 94, 95, 96, 97, 101, 111, 112, 116, 139, 140, 145, 146, 149, 151, 157, 165, 167], "2d": [4, 7, 8, 15, 16, 18, 21, 24, 27, 29, 32, 34, 36, 37, 41, 42, 48, 49, 51, 56, 63, 71, 76, 81, 86, 88, 94, 96, 100, 104, 110, 112, 115, 118, 123, 125, 126, 127, 128, 129, 132, 136, 141, 142, 144, 145, 148, 149, 152, 154, 156, 157, 164, 168, 170], "leveque97": [4, 17], "3d": [4, 7, 15, 19, 24, 32, 71, 76, 81, 86, 96, 100, 104, 112, 115, 118, 119, 121, 123, 124, 125, 128, 136, 140, 142, 145, 148, 149, 156, 157, 168, 170], "langsethleveque00": [4, 17], "amr": [4, 7, 8, 16, 18, 19, 22, 25, 27, 29, 30, 34, 36, 37, 41, 47, 48, 49, 56, 63, 71, 72, 73, 77, 78, 81, 86, 94, 118, 124, 126, 127, 128, 130, 132, 135, 144, 147, 148, 150, 152, 161, 167], "bergerleveque98": [4, 6, 7, 17], "f": [4, 5, 6, 16, 17, 18, 22, 24, 27, 29, 30, 33, 66, 67, 89, 91, 97, 98, 101, 102, 104, 106, 107, 109, 119, 123, 126, 127, 128, 132, 141, 148, 149, 150, 152, 164, 165, 167], "balelevmitross02": [4, 17, 148, 170], "bergergeorgelevequemandli11": [4, 17], "levequegeorgeberg": [4, 17], "order": [4, 5, 6, 13, 16, 17, 18, 19, 31, 32, 34, 36, 47, 52, 57, 62, 64, 67, 70, 71, 72, 75, 77, 78, 82, 84, 85, 86, 88, 91, 92, 94, 96, 97, 98, 100, 101, 104, 108, 109, 110, 111, 115, 118, 123, 127, 132, 136, 140, 142, 144, 147, 148, 149, 150, 152, 158, 162, 164, 165, 167, 170], "sharpclaw": [4, 25, 27, 78, 86, 93, 95, 96, 101, 119, 140], "ketparlev13": [4, 17, 78, 96, 140], "ketchesonmandliet": [4, 17], "support": [4, 8, 13, 18, 19, 24, 36, 37, 41, 44, 49, 52, 55, 60, 61, 73, 75, 77, 85, 86, 88, 89, 94, 97, 98, 100, 102, 104, 115, 118, 123, 125, 126, 127, 128, 132, 133, 135, 136, 140, 142, 148, 149, 151, 158, 159, 162, 165, 168], "part": [4, 5, 19, 24, 26, 32, 36, 48, 51, 52, 62, 63, 64, 86, 89, 99, 105, 106, 108, 110, 114, 116, 118, 129, 167], "nsf": 4, "grant": [4, 86], "dm": 4, "8657319": 4, "9204329": 4, "9303404": 4, "9505021": 4, "96226645": 4, "9803442": 4, "0106511": 4, "cm": [4, 32, 75, 82, 142], "0245206": 4, "0609661": 4, "0914942": 4, "1216732": 4, "ear": 4, "1331412": 4, "cmmi": 4, "1536198": 4, "doe": [4, 5, 11, 16, 19, 22, 29, 30, 36, 42, 43, 49, 52, 55, 57, 58, 62, 71, 78, 82, 85, 94, 103, 106, 109, 115, 116, 120, 125, 129, 132, 135, 139, 140, 141, 144, 158, 164, 165, 167], "de": [4, 17, 86, 96, 142], "fg06": 4, "93er25181": 4, "fg03": 4, "96er25292": 4, "fg02": 4, "88er25053": 4, "92er25139": 4, "00er2592": 4, "fc02": 4, "01er25474": 4, "afosr": 4, "f49620": 4, "94": 4, "0132": 4, "nih": 4, "5r01ar53652": 4, "onr": 4, "n00014": 4, "09": [4, 94, 102, 161], "0649": 4, "council": 4, "nfr": 4, "through": [4, 13, 30, 36, 38, 39, 47, 49, 52, 55, 70, 71, 78, 81, 89, 101, 106, 108, 109, 111, 114, 115], "program": [4, 50, 52, 67, 78], "101039": 4, "420": 4, "scientif": [4, 17, 85, 96, 99, 110, 137], "divis": [4, 55], "nation": [4, 52, 158], "center": [4, 5, 29, 32, 34, 35, 36, 37, 42, 47, 55, 57, 63, 72, 75, 88, 94, 101, 102, 108, 115, 127, 142, 144, 149, 150, 151, 158, 159, 162, 167], "atmospher": 4, "ncar": 4, "boe": 4, "professorship": 4, "founder": 4, "depart": [4, 158], "mathemat": 4, "comot": 4, "fellowship": 4, "king": [4, 86], "abdullah": [4, 86], "technologi": [4, 86], "contract": [4, 65, 86], "state": [4, 13, 17, 19, 27, 30, 58, 75, 82, 88, 89, 91, 94, 96, 97, 98, 99, 101, 102, 103, 104, 107, 108, 116, 132, 133, 140, 141, 142, 148, 162, 170], "emerg": 4, "manag": [4, 12, 13, 55, 98, 158], "tsunami": [4, 5, 16, 17, 19, 26, 27, 34, 36, 42, 48, 50, 56, 68, 75, 98, 115, 119, 122, 128, 129, 135, 142, 143, 144, 151, 159, 162], "hazard": [4, 34, 48, 68, 143], "mitig": [4, 52], "nasa": 4, "asteroid": [4, 19], "threat": 4, "assess": [4, 52, 143], "project": [4, 5, 26, 27, 32, 52, 55, 58, 59, 75, 86, 90, 125, 126, 137, 149, 164], "planetari": 4, "defens": 4, "offic": 4, "opinion": 4, "conclus": [4, 55], "express": [4, 32, 65, 86, 105, 142], "materi": [4, 45, 65, 75, 86, 113, 130], "those": [4, 6, 10, 12, 18, 19, 24, 26, 52, 55, 56, 59, 70, 78, 88, 89, 91, 98, 101, 106, 115, 116, 119, 130, 132, 138, 139, 153, 160, 164, 167], "necessarili": [4, 42, 77, 97, 116], "agenc": [4, 60, 158, 159], "approach": [5, 7, 13, 18, 19, 30, 31, 41, 47, 49, 58, 61, 74, 81, 89, 96, 99, 101, 109, 115, 123, 125, 126, 128, 140, 141, 147, 167, 170], "introduc": [5, 16, 21, 34, 35, 36, 37, 42, 49, 82, 118, 130, 132, 139, 142, 144, 149, 170], "6": [5, 19, 24, 27, 30, 32, 34, 36, 41, 42, 44, 47, 51, 52, 55, 58, 63, 68, 70, 71, 72, 76, 82, 95, 96, 97, 101, 102, 104, 105, 110, 111, 115, 130, 138, 140, 142, 148, 149, 162, 169], "what": [5, 6, 9, 13, 14, 18, 19, 24, 27, 30, 32, 33, 34, 41, 49, 52, 54, 55, 58, 59, 61, 62, 63, 66, 67, 70, 71, 72, 77, 81, 88, 91, 95, 103, 106, 108, 111, 114, 115, 116, 124, 142, 143, 147, 148, 150, 151, 152, 153, 162, 164, 166, 167], "forward": [5, 64, 104, 115, 128, 167], "becaus": [5, 18, 19, 24, 29, 34, 36, 42, 55, 59, 70, 72, 97, 98, 99, 119, 140, 143, 148], "impact": [5, 19, 75], "autonom": 5, "shift": [5, 32, 52, 57], "perform": [5, 6, 17, 24, 29, 52, 55, 57, 76, 78, 81, 82, 91, 94, 97, 101, 104, 109, 116, 129, 132, 139, 140, 146, 151, 160], "snapshot": [5, 30, 98, 128], "save": [5, 13, 27, 28, 35, 36, 37, 42, 54, 63, 77, 91, 95, 104, 124, 125, 127, 132, 139, 159, 164], "space": [5, 6, 7, 16, 17, 27, 32, 34, 35, 36, 37, 47, 48, 51, 55, 57, 75, 77, 94, 98, 101, 115, 118, 123, 135, 139, 142, 148, 149, 150, 151, 152, 162, 164, 167], "interpol": [5, 6, 16, 19, 27, 32, 35, 37, 42, 47, 48, 57, 63, 64, 71, 75, 82, 118, 125, 132, 135, 142, 143, 144, 158, 159, 164], "regrid": [5, 10, 115, 119, 120, 125, 128, 129, 149, 150, 161], "davisleveque2018": [5, 17], "davis2018": [5, 17], "discuss": [5, 18, 19, 26, 30, 32, 52, 57, 70, 75, 97, 108, 110, 111, 115, 118, 125, 127, 140, 151, 154, 170], "when": [5, 14, 15, 16, 19, 22, 30, 31, 32, 34, 36, 37, 42, 43, 44, 47, 49, 53, 54, 55, 57, 58, 59, 61, 62, 64, 68, 70, 71, 75, 76, 77, 78, 81, 82, 84, 88, 95, 96, 97, 99, 100, 104, 107, 111, 115, 116, 118, 119, 120, 122, 124, 125, 126, 130, 132, 134, 135, 136, 140, 142, 143, 144, 145, 147, 148, 149, 150, 151, 152, 153, 158, 162, 164, 165, 166, 167, 168, 170], "accur": [5, 18, 19, 49, 52, 72, 75, 96, 104, 132, 148, 167, 170], "entir": [5, 6, 36, 41, 52, 55, 63, 70, 72, 75, 76, 78, 88, 98, 103, 113, 115, 120, 142, 164], "domain": [5, 6, 16, 17, 35, 36, 41, 42, 49, 52, 55, 58, 63, 75, 77, 87, 88, 89, 91, 99, 101, 103, 106, 113, 115, 118, 135, 149, 150, 151, 152, 162], "dimens": [5, 6, 7, 16, 22, 24, 27, 47, 48, 51, 57, 63, 71, 72, 88, 89, 91, 97, 99, 101, 102, 103, 106, 108, 115, 118, 127, 130, 140, 148, 149, 150, 152, 164, 167], "int_a": 5, "phi": 5, "dx": [5, 15, 17, 32, 34, 35, 36, 51, 57, 64, 75, 77, 89, 94, 98, 123, 127, 145, 162, 164, 167], "leq": [5, 142], "backward": [5, 30, 32, 35, 51, 63, 75, 77, 97, 120, 121, 136, 164], "small": [5, 16, 19, 36, 42, 47, 68, 70, 115, 116, 118, 119, 124, 139, 148, 150, 151, 162, 164, 166], "sai": [5, 13, 16, 30, 63, 107, 115], "x_1": [5, 142], "x_2": [5, 142], "might": [5, 10, 13, 14, 16, 24, 30, 31, 37, 38, 39, 40, 41, 42, 51, 55, 57, 58, 62, 67, 70, 71, 72, 76, 82, 85, 88, 98, 102, 111, 113, 114, 115, 119, 148, 149, 162, 164, 166, 167], "box": [5, 32, 35, 55, 63, 142, 164], "interv": [5, 47, 49, 51, 88, 108, 115, 132, 142, 148, 151], "elsewher": [5, 26, 42, 96, 142], "sharpli": 5, "peak": 5, "gaussian": [5, 88, 108, 152], "final": [5, 32, 37, 44, 58, 64, 71, 75, 88, 91, 98, 108, 113, 119, 139, 141, 148, 150, 152, 164], "necessari": [5, 6, 13, 18, 19, 30, 36, 37, 38, 39, 50, 52, 55, 58, 59, 62, 63, 71, 75, 77, 78, 84, 88, 89, 94, 97, 118, 123, 125, 127, 139, 140, 147, 148, 149, 162, 165, 167], "place": [5, 16, 22, 26, 30, 32, 38, 39, 55, 58, 62, 66, 67, 74, 96, 98, 99, 101, 105, 111, 119, 125, 137, 167], "earlier": [5, 19, 22, 24, 32, 34, 41, 47, 57, 75, 88, 101, 119, 126, 139, 162, 164], "help": [5, 7, 9, 25, 26, 27, 30, 31, 42, 43, 53, 58, 60, 66, 81, 84, 96, 99, 105, 109, 116, 124, 130, 140, 153, 165], "identifi": [5, 38, 39, 42, 55, 70, 89, 115, 130, 158], "hat": 5, "given": [5, 19, 32, 42, 51, 55, 57, 63, 68, 71, 75, 92, 97, 99, 103, 104, 106, 109, 115, 132, 142, 143, 144, 151, 162, 164, 167], "t_r": 5, "reach": [5, 115, 139], "acoustics_1d_adjoint": 5, "acoustics_2d_adjoint": 5, "main": [5, 11, 12, 19, 21, 30, 42, 46, 58, 59, 70, 71, 78, 89, 91, 97, 101, 108, 109, 116, 118, 126, 135], "subdirectori": [5, 12, 22, 24, 25, 38, 39, 58, 59, 62, 66, 74, 84, 93, 98, 111, 116, 135, 147, 151, 153, 160, 164], "must": [5, 6, 13, 16, 18, 19, 22, 24, 30, 32, 34, 36, 42, 46, 49, 50, 55, 58, 61, 65, 66, 67, 70, 71, 75, 76, 77, 86, 89, 96, 97, 98, 101, 103, 104, 106, 107, 108, 109, 111, 115, 119, 123, 140, 142, 143, 144, 148, 149, 150, 151, 152, 158, 164, 165, 166, 167, 170], "makefil": [5, 6, 11, 14, 15, 16, 21, 22, 25, 27, 30, 36, 38, 39, 44, 58, 76, 78, 82, 84, 89, 95, 96, 115, 118, 119, 123, 125, 127, 128, 130, 136, 144, 145, 148, 150, 151, 152, 153, 156, 157, 162, 165, 167], "coeffici": [5, 68, 101, 102, 104, 106, 107, 108, 140, 151], "matric": [5, 140, 170], "transpos": 5, "vice": 5, "versa": 5, "q_t": [5, 101, 102, 104, 108, 167, 170], "q_x": [5, 102, 108, 170], "_x": [5, 42, 70, 102, 104, 164, 167, 170], "eigenvalu": 5, "unchang": [5, 71], "upon": [5, 106], "transform": [5, 44], "eigenvector": [5, 140, 170], "right": [5, 19, 32, 34, 65, 68, 75, 86, 94, 99, 101, 102, 106, 108, 132, 139, 140, 142, 170], "rp1_acoustics_variable_adjoint": 5, "f90": [5, 9, 15, 18, 19, 22, 33, 34, 36, 42, 47, 49, 56, 66, 67, 76, 77, 85, 101, 112, 115, 119, 123, 125, 127, 128, 129, 130, 132, 133, 136, 140, 141, 144, 145, 154, 156, 157, 162, 165, 167], "boundari": [5, 7, 19, 22, 27, 42, 55, 63, 67, 70, 75, 76, 89, 94, 102, 104, 108, 113, 120, 123, 127, 142, 148, 150, 152], "condit": [5, 7, 19, 22, 27, 65, 67, 78, 86, 87, 88, 89, 91, 98, 104, 112, 119, 120, 123, 127, 143, 148, 150, 151, 152], "adjust": [5, 13, 18, 19, 22, 34, 35, 48, 63, 77, 94, 98, 136, 139, 143, 148, 167], "principl": [5, 164, 167], "vanish": 5, "dure": [5, 24, 34, 42, 47, 63, 75, 78, 119, 143, 144, 150, 151, 152, 154, 162], "integr": [5, 24, 57, 64, 86, 96, 98, 104, 119, 120, 124, 150, 152, 161, 162, 167], "qinit": [5, 22, 24, 42, 48, 66, 67, 89, 132, 143, 144, 167], "setrun": [5, 6, 7, 8, 14, 16, 21, 22, 27, 34, 35, 36, 37, 38, 39, 41, 42, 43, 45, 48, 49, 50, 52, 63, 64, 66, 68, 70, 77, 78, 82, 96, 112, 113, 115, 119, 123, 124, 125, 128, 130, 132, 135, 136, 137, 139, 140, 143, 144, 154, 158, 162, 165, 167], "clawdata": [5, 19, 41, 49, 77, 119, 123, 139, 148, 149, 150, 151, 152], "tfinal": [5, 77, 88, 91, 108, 139, 148, 150, 152], "via": [5, 13, 24, 25, 26, 30, 31, 32, 36, 38, 39, 44, 47, 50, 52, 55, 58, 59, 61, 62, 64, 66, 70, 71, 75, 76, 78, 82, 85, 88, 94, 97, 100, 103, 105, 107, 111, 115, 116, 118, 127, 130, 140, 142, 146, 151, 153, 156, 157, 162, 164, 167], "num_output_tim": [5, 77, 88, 91, 98, 139, 148, 150, 152], "larg": [5, 6, 12, 19, 22, 36, 37, 38, 39, 42, 52, 55, 57, 58, 71, 76, 81, 96, 98, 99, 115, 116, 118, 124, 132, 135, 139, 142, 144, 148, 149, 164, 166], "frequent": [5, 22, 29, 36, 47, 64, 107, 124, 135], "enough": [5, 47, 49, 58, 64, 70, 149, 159, 161, 162], "them": [5, 13, 20, 24, 30, 31, 32, 34, 47, 51, 55, 58, 71, 78, 86, 88, 93, 97, 98, 99, 101, 109, 113, 116, 118, 120, 129, 135, 136, 137, 142, 155, 158, 164, 167], "reason": [5, 19, 49, 52, 55, 63, 75, 76, 78, 99, 101, 115, 148], "output_format": [5, 36, 37, 77, 91, 98, 135, 148, 150, 152], "binari": [5, 36, 44, 47, 59, 65, 86, 98, 100, 124, 135, 136, 139, 148, 164, 168], "manner": [5, 36, 42, 47, 55, 64, 70, 75, 81, 127, 144, 148, 156, 157, 162], "attribut": [5, 7, 18, 24, 32, 36, 37, 41, 47, 70, 75, 81, 83, 84, 88, 91, 94, 97, 99, 101, 103, 104, 115, 118, 119, 124, 128, 136, 139, 147, 148, 149, 151, 158, 164], "clawutil": [5, 11, 14, 21, 22, 25, 30, 43, 44, 54, 59, 60, 61, 66, 111, 116, 146, 148, 149, 150, 152, 164, 165], "clawrundata": [5, 47, 63, 128, 139, 148, 149, 150, 152], "adjointdata": [5, 128, 129], "ia": 5, "attribur": 5, "toler": [5, 34, 102, 109, 115, 116, 125, 149, 150, 151], "rundata": [5, 18, 19, 24, 34, 36, 41, 42, 47, 49, 63, 64, 115, 119, 130, 137, 139, 144, 148, 149, 150, 151, 152, 154], "use_adjoint": 5, "adjoint_outdir": 5, "abspath": [5, 41], "_output": [5, 13, 14, 34, 36, 38, 39, 47, 54, 64, 71, 82, 84, 93, 98, 100, 103, 124, 131, 165], "period": [5, 6, 16, 34, 66, 88, 101, 115, 118, 148, 150, 152], "t1": [5, 41, 47, 63, 64, 115, 132, 149, 150, 151], "t0": [5, 18, 19, 77, 139, 148, 150, 151, 152, 162], "t2": [5, 41, 47, 63, 64, 115, 132, 149, 150, 151], "addit": [5, 7, 13, 16, 17, 19, 25, 26, 30, 31, 34, 36, 39, 40, 41, 48, 49, 50, 63, 70, 75, 77, 78, 82, 83, 89, 92, 94, 96, 98, 104, 105, 106, 113, 115, 118, 123, 125, 126, 127, 128, 131, 132, 134, 135, 136, 140, 142, 148, 152, 158, 161, 162, 167, 168], "aux": [5, 6, 15, 22, 24, 29, 47, 57, 89, 96, 97, 98, 101, 103, 104, 106, 107, 119, 120, 125, 127, 140, 141, 145, 148, 149, 150, 151, 152, 167], "inner": [5, 115, 128], "product": [5, 32, 65, 86, 109, 115, 128], "amrdata": [5, 24, 34, 115, 130, 132, 149, 150, 151], "aux_typ": [5, 149, 150], "append": [5, 22, 34, 36, 41, 42, 47, 55, 64, 82, 91, 103, 115, 124, 125, 137, 139, 140, 150, 151], "num_aux": [5, 89, 97, 99, 101, 102, 106, 140, 148, 149, 150, 152, 167], "len": [5, 32, 37, 94, 150, 152, 164], "innerprod_index": 5, "base": [5, 6, 13, 19, 22, 23, 24, 30, 31, 32, 34, 35, 36, 48, 49, 51, 55, 56, 57, 58, 63, 64, 67, 68, 70, 71, 75, 78, 89, 91, 92, 94, 96, 97, 102, 103, 104, 106, 108, 109, 115, 117, 123, 126, 128, 132, 135, 136, 143, 148, 149, 150, 151, 152, 158, 164, 167, 170], "richardson": [5, 7, 24, 149, 150], "error": [5, 16, 22, 38, 39, 43, 55, 62, 71, 76, 82, 91, 96, 97, 98, 109, 115, 116, 128, 132, 137, 149, 150, 158, 165], "estimat": [5, 150], "flag_richardson": [5, 115, 124, 149, 150], "flag_richardson_tol": [5, 115, 149, 150], "1e": [5, 70, 152], "flag2refin": [5, 7, 24, 149, 150], "flag2refine_tol": [5, 115, 149, 150], "01": [5, 17, 42, 77, 94, 164], "we": [5, 6, 18, 19, 24, 26, 28, 34, 38, 39, 41, 42, 47, 52, 55, 57, 58, 59, 60, 62, 67, 70, 72, 75, 81, 84, 88, 89, 90, 91, 93, 94, 97, 98, 99, 100, 101, 104, 105, 106, 107, 108, 109, 110, 113, 116, 127, 130, 135, 137, 140, 141, 142, 164], "attempt": [5, 8, 11, 22, 35, 38, 39, 66, 97, 103, 109, 116, 119, 133, 158, 164, 165], "estim": [5, 68, 115, 149, 151], "step": [5, 6, 10, 16, 18, 19, 21, 30, 34, 36, 38, 39, 40, 47, 55, 58, 59, 64, 71, 77, 78, 81, 84, 86, 87, 88, 89, 91, 98, 101, 104, 106, 108, 113, 115, 118, 119, 124, 125, 135, 139, 140, 146, 148, 149, 150, 151, 152, 162, 170], "extrapol": [5, 7, 16, 24, 72, 101, 108, 127, 148, 149, 150, 152], "togeth": [5, 16, 30, 31, 32, 58, 60, 75, 115, 135], "experiment": [5, 86], "simpli": [5, 13, 19, 36, 38, 39, 40, 42, 47, 49, 55, 57, 66, 67, 70, 72, 88, 90, 91, 93, 98, 99, 105, 116, 118, 140, 142, 153, 158, 164, 167, 168], "magnitud": [5, 32, 115, 127, 151], "greater": [5, 34, 63, 68, 70, 105, 115, 139, 148, 149, 151], "model": [5, 12, 16, 17, 18, 19, 26, 27, 32, 34, 44, 48, 49, 50, 56, 57, 68, 98, 115, 124, 129, 130, 131, 142, 143, 144, 151, 154, 158, 159, 162], "davisleveque2016": [5, 17], "chile2010_adjoint": 5, "shallow": [5, 15, 16, 17, 18, 19, 27, 34, 36, 42, 48, 49, 52, 56, 70, 78, 89, 96, 112, 118, 120, 121, 123, 125, 127, 128, 136, 137, 140, 144, 145, 151, 156, 157, 162, 167], "water": [5, 16, 17, 18, 19, 27, 36, 42, 47, 48, 49, 50, 51, 52, 63, 70, 78, 81, 89, 96, 118, 120, 121, 125, 127, 128, 137, 140, 142, 143, 144, 151, 162, 164, 166, 167], "while": [5, 13, 16, 19, 32, 42, 55, 71, 75, 82, 84, 89, 94, 98, 99, 104, 109, 127, 140, 144, 151, 166], "suitabl": [5, 8, 16, 18, 19, 22, 48, 52, 55, 73, 77, 103, 114, 140, 143, 158, 164], "To": [5, 6, 13, 14, 18, 19, 20, 24, 27, 30, 31, 38, 39, 40, 41, 42, 43, 47, 50, 53, 55, 56, 59, 66, 69, 70, 71, 75, 76, 77, 82, 84, 85, 88, 90, 92, 93, 96, 97, 98, 99, 100, 101, 104, 105, 108, 111, 113, 114, 115, 116, 118, 123, 125, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 139, 143, 146, 148, 149, 153, 162, 168], "date": [5, 17, 30, 43, 51, 55, 58, 59, 66, 82, 158, 165], "across": [5, 115, 125, 162, 164], "ocean": [5, 16, 17, 19, 34, 49, 52, 55, 113, 115, 142, 151, 156, 157, 162], "wai": [5, 6, 13, 16, 19, 28, 30, 36, 38, 39, 41, 42, 47, 49, 55, 57, 58, 61, 62, 63, 65, 66, 82, 84, 85, 86, 88, 91, 93, 94, 99, 101, 103, 105, 108, 110, 111, 113, 114, 119, 125, 126, 127, 130, 137, 138, 140, 142, 147, 148, 155, 159, 162, 167, 169, 170], "target": [5, 62, 82, 89, 101, 130], "possibli": [5, 32, 36, 70, 88, 94, 111, 118, 124, 144], "deep": [5, 49, 70], "amplitud": [5, 125], "compar": [5, 18, 19, 24, 39, 47, 49, 52, 55, 59, 82, 98, 115, 116, 143, 149, 160, 166, 170], "essenti": [5, 57, 71, 104, 151, 162], "rest": [5, 24, 84, 113, 127, 143, 156, 157, 162, 164], "henc": [5, 36, 57, 58, 67, 72, 104, 110, 111, 115, 144], "take": [5, 6, 24, 29, 30, 32, 34, 37, 51, 58, 68, 70, 71, 75, 82, 88, 94, 101, 104, 108, 109, 110, 115, 116, 118, 122, 128, 136, 144, 148, 149, 150, 151, 164, 167, 170], "rpn2_geoclaw_adjoint_qwav": 5, "rpt2_geoclaw_adjoint_qwav": 5, "non": [5, 16, 59, 70, 78, 89, 101, 108, 128, 130, 148, 150, 152, 158, 170], "vector": [5, 24, 88, 92, 98, 106, 127, 135, 140, 141], "split": [5, 6, 76, 94, 97, 104, 123, 124, 132, 148, 149, 150, 152, 161, 167, 170], "flux": [5, 17, 34, 36, 37, 94, 102, 104, 140, 148, 170], "comment": [5, 11, 19, 26, 53, 59, 126, 135, 139], "rpn2": [5, 140], "basic": [6, 10, 12, 27, 32, 38, 40, 48, 61, 70, 71, 88, 94, 96, 97, 98, 102, 104, 116, 140, 141, 158, 170], "strategi": 6, "logic": [6, 16, 17, 34, 132, 151], "rectangular": [6, 7, 16, 17, 32, 34, 37, 41, 42, 48, 50, 63, 70, 94, 115, 127, 130, 135, 149, 151, 162], "too": [6, 19, 51, 55, 58, 59, 118, 124, 142, 150, 152, 154], "portion": [6, 36, 42, 55, 70, 89, 135, 161], "factor": [6, 55, 149, 151, 161, 164], "direct": [6, 8, 16, 24, 32, 34, 36, 38, 39, 47, 49, 51, 55, 59, 63, 65, 66, 71, 75, 76, 82, 86, 91, 101, 108, 115, 126, 140, 148, 149, 151, 164], "anisotrop": [6, 24], "perhap": [6, 12, 19, 34, 42, 47, 58, 82, 106, 109, 115, 142], "section": [6, 13, 16, 36, 38, 39, 42, 44, 49, 50, 52, 58, 59, 67, 71, 81, 84, 96, 116, 132, 139, 148, 151, 164], "cfl": [6, 49, 94, 98, 104, 108, 118, 119, 124, 148, 150, 151, 152], "spatial": [6, 17, 27, 32, 36, 37, 41, 42, 47, 48, 49, 64, 68, 72, 101, 115, 119, 123, 130, 132, 140, 143, 149, 150, 151, 152, 170], "reduc": [6, 16, 36, 42, 49, 55, 118, 124, 126, 135, 170], "thu": [6, 51, 98, 101, 127, 158], "proce": [6, 18, 19, 30, 151], "advanc": [6, 17, 36, 56, 70, 76, 108, 124, 136, 148, 149, 167], "taken": [6, 34, 70, 75, 98, 104, 115, 148, 167], "around": [6, 32, 34, 42, 63, 97, 113, 116, 130, 149, 150, 158, 164, 167], "librari": [6, 13, 15, 16, 18, 19, 22, 24, 27, 29, 30, 34, 36, 38, 39, 44, 47, 49, 56, 63, 66, 76, 77, 78, 86, 92, 97, 99, 104, 109, 111, 112, 115, 125, 130, 144, 145, 149, 156, 157, 165, 167], "bcnamr": [6, 16, 127, 148, 150, 167], "check": [6, 14, 15, 16, 22, 34, 38, 39, 43, 44, 54, 55, 56, 58, 59, 60, 62, 66, 71, 82, 85, 88, 89, 91, 96, 99, 103, 104, 106, 108, 109, 111, 112, 115, 120, 129, 142, 144, 145, 149, 150, 156, 157, 158, 164, 165, 166, 167], "denot": [6, 19, 24, 37, 47, 57, 140, 164], "procedur": [6, 16, 42, 48, 49, 59, 167], "updat": [6, 12, 13, 24, 25, 27, 34, 53, 56, 61, 62, 64, 84, 96, 104, 106, 107, 110, 113, 118, 119, 123, 125, 126, 127, 128, 129, 130, 140, 149, 150, 152, 155, 158, 161, 167], "consist": [6, 27, 34, 36, 51, 55, 59, 63, 99, 110, 125, 135, 136, 140, 142, 151, 162, 167], "replac": [6, 13, 31, 36, 41, 47, 52, 56, 58, 59, 61, 64, 66, 81, 89, 93, 97, 99, 100, 101, 102, 106, 109, 116, 118, 119, 125, 127, 129, 130, 135, 139, 140, 144, 164, 165], "ly": [6, 70], "within": [6, 16, 30, 36, 37, 58, 62, 70, 72, 78, 82, 100, 109, 111, 115, 140, 142, 147, 153, 164], "approxim": [6, 16, 18, 19, 27, 35, 52, 55, 72, 75, 140], "lead": [6, 13, 24, 34, 36, 52, 55, 68, 71, 75, 111, 114, 132, 144, 149], "total": [6, 32, 36, 55, 75, 77, 98, 104, 148, 149, 150, 152, 161], "mass": [6, 98, 118, 154], "restor": 6, "global": [6, 14, 94, 106, 109, 118, 143, 162, 166, 167], "fix": [6, 21, 22, 24, 27, 35, 37, 41, 47, 48, 49, 58, 59, 63, 64, 66, 70, 72, 86, 97, 102, 118, 119, 120, 121, 122, 123, 124, 125, 126, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 141, 148, 150, 152, 164], "up": [6, 13, 19, 24, 30, 31, 32, 34, 36, 38, 39, 42, 43, 47, 48, 55, 58, 59, 63, 66, 70, 71, 75, 77, 82, 88, 89, 91, 93, 95, 96, 97, 99, 104, 105, 108, 111, 113, 115, 116, 118, 123, 124, 127, 130, 132, 137, 142, 144, 147, 150, 152, 161, 162, 165, 166], "style": [6, 24, 30, 32, 36, 41, 53, 55, 70, 73, 82, 86, 91, 127, 151], "olig": [6, 17], "colella": [6, 17], "bergeroliger84": [6, 17], "bergercolella89": [6, 17], "fortran": [6, 9, 11, 13, 14, 19, 22, 25, 29, 30, 32, 34, 35, 36, 37, 38, 47, 48, 50, 57, 60, 62, 66, 67, 68, 72, 76, 77, 78, 81, 84, 86, 88, 89, 91, 94, 96, 97, 99, 101, 102, 104, 105, 106, 109, 111, 118, 123, 124, 125, 127, 128, 129, 135, 136, 140, 141, 146, 149, 150, 151, 152, 158, 160, 161, 162], "written": [6, 11, 27, 32, 34, 36, 37, 43, 47, 62, 63, 64, 65, 75, 77, 78, 82, 86, 95, 96, 97, 101, 125, 140, 148, 149, 150, 151, 152, 158, 164, 167], "ga": [6, 102], "dynam": [6, 22, 32, 36, 52, 75, 78, 149], "merg": [6, 13, 27, 30, 56, 58, 59, 62, 123], "earli": [6, 22, 144], "mjb": [6, 17], "rjl": [6, 17, 111, 129], "fulli": [6, 52, 55, 56, 126, 130, 140, 151, 158, 159], "consid": [6, 42, 52, 62, 70, 89, 111, 146, 153, 164], "adjac": [6, 16, 34, 48, 115, 144, 148], "equival": [6, 47, 56, 57, 63, 64, 77, 129, 135, 162], "copi": [6, 14, 15, 16, 19, 38, 39, 47, 55, 58, 59, 62, 71, 88, 91, 101, 106, 112, 113, 114, 115, 120, 124, 127, 131, 144, 145, 149, 153, 156, 157, 162, 167], "interior": [6, 16, 42, 77, 106], "howev": [6, 13, 16, 18, 19, 24, 34, 38, 39, 42, 44, 49, 50, 52, 55, 62, 65, 67, 70, 72, 75, 76, 77, 86, 89, 96, 115, 116, 125, 127, 129, 143, 144, 147, 151, 161], "lie": [6, 34, 35, 37, 70, 72, 115, 130, 142], "outsid": [6, 16, 41, 63, 70, 130, 142, 144, 162, 164], "li": [6, 16, 34, 37, 72, 115, 142], "along": [6, 14, 16, 19, 26, 29, 32, 34, 42, 47, 55, 58, 61, 75, 77, 111, 115, 118, 123, 138, 139, 142, 144, 151, 166], "unless": [6, 34, 43, 44, 63, 102, 110, 143, 148, 149, 164], "standard": [6, 16, 19, 32, 34, 36, 49, 55, 57, 71, 77, 89, 92, 104, 111, 115, 116, 150, 151, 152, 153, 162, 167, 170], "beyond": [6, 32, 110, 127], "modifi": [6, 9, 14, 15, 16, 18, 19, 22, 24, 29, 34, 38, 39, 42, 47, 48, 58, 59, 62, 64, 66, 71, 74, 82, 89, 92, 94, 96, 101, 111, 112, 113, 114, 115, 122, 124, 125, 126, 127, 132, 142, 144, 145, 148, 150, 151, 152, 156, 157, 162, 164, 167], "damag": [6, 65, 86], "bcn": [6, 16, 152, 167], "nd": [6, 16, 115, 127, 130, 167], "actual": [6, 29, 32, 36, 57, 62, 63, 71, 75, 82, 92, 97, 109, 113, 143, 151], "softwar": [6, 13, 26, 27, 31, 48, 52, 65, 86, 96, 97, 98, 153, 162], "With": [6, 24, 30, 47, 51, 53, 55, 62, 70, 78, 115, 124, 140, 142, 148], "opposit": [6, 16, 97], "side": [6, 16, 19, 20, 34, 55, 58, 68, 75, 97, 116, 118, 135, 136, 137, 140, 170], "everi": [6, 12, 30, 34, 36, 47, 64, 66, 67, 77, 88, 91, 93, 97, 98, 106, 115, 116, 118, 125, 126, 140, 144, 146, 148, 150, 152, 158, 162, 164, 167], "few": [6, 12, 13, 19, 24, 28, 30, 31, 39, 49, 52, 58, 70, 71, 89, 104, 108, 110, 115, 116, 130, 143, 160, 162, 167], "coarsest": [6, 19, 36, 55, 77, 119, 139, 148], "revis": [6, 125], "shock": [6, 17, 52, 104, 115], "accord": [6, 57, 97], "criteria": [6, 7, 24, 27, 34, 70, 106], "cluster": [6, 17, 115, 149, 150], "rigoutsi": 6, "bergerrigoutsis91": [6, 17], "nonoverlap": 6, "rectangl": [6, 7, 27, 32, 36, 70, 75, 115, 130, 164], "balanc": [6, 17, 78, 126, 141, 156, 157], "conflict": [6, 30, 62, 66, 71, 107, 111], "goal": 6, "possibl": [6, 13, 24, 28, 30, 32, 34, 36, 37, 47, 49, 51, 52, 55, 64, 65, 66, 75, 82, 86, 94, 97, 99, 100, 104, 109, 111, 115, 140, 142, 143, 148, 149, 162, 166, 167], "minim": [6, 62, 70, 97, 142, 149, 164], "overhead": [6, 76, 115, 161], "cutoff": [6, 150], "control": [6, 7, 25, 27, 34, 36, 44, 47, 58, 62, 64, 71, 77, 84, 87, 92, 94, 96, 97, 98, 99, 101, 115, 125, 130, 141, 151], "fraction": [6, 13, 32, 115, 148, 167, 170], "7": [6, 14, 31, 34, 36, 41, 42, 47, 51, 58, 64, 68, 70, 77, 82, 85, 94, 105, 111, 115, 132, 138, 142, 143, 144, 149, 150], "70": [6, 36, 55], "realli": [6, 72, 116, 167], "At": [6, 13, 29, 30, 36, 38, 39, 42, 70, 99, 104, 108, 110, 115, 130, 148], "present": [6, 26, 63, 72, 94, 97, 102, 103, 104, 109, 153, 154, 167, 170], "previous": [6, 24, 34, 70, 77, 84, 118, 123, 130, 144], "bilinear": [6, 34, 42, 47, 57, 72, 119, 120, 162], "doxygen": [6, 7, 27, 126], "flowchart": [6, 7, 27], "capabl": [7, 12, 19, 24, 34, 36, 47, 52, 56, 64, 70, 78, 89, 96, 119, 124, 125, 127, 128, 129, 130, 131, 135, 136, 164, 166], "block": [7, 32, 35, 42, 63, 75, 77, 78, 88, 97, 106, 109, 116, 167], "structur": [7, 10, 24, 34, 36, 37, 41, 59, 62, 66, 78, 103, 104, 125, 142, 147, 164], "input": [7, 14, 16, 22, 25, 27, 29, 32, 35, 37, 43, 48, 55, 63, 67, 70, 71, 77, 88, 91, 92, 94, 96, 102, 103, 104, 109, 113, 124, 127, 128, 129, 140, 150, 151, 152, 158, 159, 162, 164, 167], "indic": [7, 16, 19, 22, 24, 27, 31, 32, 34, 36, 41, 42, 44, 47, 48, 55, 57, 59, 62, 67, 71, 72, 80, 84, 94, 98, 99, 102, 104, 108, 111, 115, 116, 125, 130, 132, 140, 141, 148, 149, 150, 151, 152, 154, 162, 164, 167], "tool": [7, 8, 17, 24, 25, 30, 32, 34, 35, 36, 37, 38, 39, 42, 48, 49, 50, 51, 52, 55, 57, 60, 61, 62, 63, 71, 75, 80, 81, 82, 83, 85, 96, 111, 114, 120, 121, 125, 126, 130, 131, 151, 153, 162, 164, 166, 168], "matlab": [7, 24, 27, 38, 39, 80, 81, 82, 100, 110, 118, 127, 130, 131], "deprec": [7, 32, 48, 58, 62, 118, 123, 127, 135, 137, 162, 164], "debug": [7, 18, 44, 66, 77, 81, 98, 106, 111, 116, 135, 148, 150], "flag": [7, 12, 13, 18, 24, 27, 30, 31, 41, 43, 44, 48, 56, 62, 76, 89, 107, 109, 111, 118, 123, 128, 132, 150, 151], "sampl": [7, 8, 14, 17, 18, 27, 31, 36, 44, 47, 48, 51, 55, 64, 75, 111, 116, 135, 139, 142, 148, 149, 162, 164, 167], "ghost": [7, 16, 19, 76, 77, 94, 97, 104, 106, 125, 132, 136, 148, 150, 152, 161, 167, 170], "flagregion": [7, 27, 70, 115, 130, 132, 142, 149, 151], "rule": [7, 13, 27, 63, 70, 89], "convex": [7, 34], "slu": 7, "bounding_box": [7, 35], "mask_outsid": [7, 70], "write": [7, 30, 32, 35, 36, 37, 41, 42, 47, 48, 54, 57, 58, 68, 75, 77, 78, 81, 88, 91, 94, 95, 97, 98, 99, 103, 118, 125, 127, 150, 152, 158, 162, 164], "instanti": [7, 91, 99, 101, 104, 106, 136, 150, 152], "make_kml": 7, "simpl": [7, 31, 38, 39, 41, 48, 59, 72, 75, 89, 96, 101, 102, 104, 109, 114, 116, 164], "select": [7, 12, 13, 15, 16, 30, 34, 42, 70, 97, 98, 104, 112, 115, 119, 126, 130, 138, 145, 148, 151, 156, 157, 166], "continent": [7, 70], "shelf": [7, 70], "guid": [7, 13, 17, 20, 25, 26, 27, 48, 50, 56, 61, 96, 110, 115, 118, 126, 130, 135, 136, 137, 155], "adjoint": [7, 17, 27, 56, 115, 127, 128], "gaug": [7, 27, 34, 36, 48, 49, 63, 72, 94, 95, 106, 113, 119, 123, 124, 125, 126, 127, 130, 135, 139, 143, 147, 150], "extend": [8, 16, 24, 42, 63, 70, 71, 94, 127, 142, 144, 151, 162, 164, 170], "directli": [8, 18, 19, 21, 25, 34, 48, 52, 61, 71, 75, 82, 84, 88, 89, 92, 96, 106, 109, 111, 127, 135, 164, 168], "obviou": [8, 55], "elimin": [8, 24, 70, 89, 111, 127, 151], "gallery_classic_amrclaw": 8, "num_cel": [8, 24, 49, 94, 140, 148, 149, 150, 152], "refinement_ratios_i": [8, 149, 150], "sweep": [8, 140], "transvers": [8, 94, 125, 132, 140, 141, 148, 167, 170], "graph": 9, "understand": [9, 27, 38, 39, 52, 81, 96, 108, 115, 140], "filpatch": [9, 42, 125, 129, 132], "idea": [10, 26, 32, 70, 71, 78, 88, 108, 120, 164, 170], "overal": [10, 88], "who": [10, 12, 21, 24, 26, 34, 44, 52, 60, 118], "gori": 10, "monster": 10, "column": [10, 32, 34, 47, 49, 52, 64, 98, 102, 123, 142, 164], "markup": 11, "languag": [11, 81, 109], "restructur": [11, 58], "text": [11, 58, 59, 63, 77, 91, 97, 104, 123], "sphinx": [11, 25, 27, 59, 126], "covert": 11, "convert_readm": 11, "brows": [11, 26, 45, 55, 71, 153, 167], "insert": [11, 16, 75, 97, 118, 146], "script": [11, 21, 22, 30, 32, 34, 36, 43, 47, 55, 58, 66, 71, 78, 81, 86, 89, 93, 95, 96, 98, 99, 104, 109, 111, 116, 127, 131, 140, 147, 151, 152, 164], "invok": [11, 14, 19, 76, 144, 165], "minor": [11, 19, 55, 58, 98, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 130, 132, 134, 136, 137], "syntax": [11, 61, 146], "highlight": [11, 13], "header": [11, 32, 34, 36, 42, 47, 57, 70, 75, 77, 97, 103, 123, 125, 127, 158, 162, 164], "complex": [12, 19, 36, 41, 94], "archiv": [12, 23, 39, 55, 59, 116, 153, 160, 164, 166], "github": [12, 15, 19, 24, 25, 26, 27, 28, 31, 56, 58, 61, 62, 93, 101, 105, 112, 116, 118, 122, 124, 125, 126, 135, 138, 140, 141, 145, 156, 157, 165], "app": [12, 13, 20, 25, 28, 30, 31, 40, 45, 46, 75, 113, 114, 118, 122, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 141], "com": [12, 13, 19, 25, 26, 28, 30, 31, 51, 56, 58, 59, 61, 62, 97, 99, 101, 105, 122, 124, 125, 126, 135, 138, 141], "fvmbook": [12, 17, 45, 46], "galleri": [12, 17, 27, 34, 36, 38, 39, 40, 45, 48, 49, 59, 80, 81, 93, 96, 110, 116, 122, 126, 153, 160, 167], "anim": [12, 16, 36, 45, 49, 55, 123, 130, 131, 135, 153], "instal": [12, 13, 19, 20, 25, 27, 31, 38, 46, 55, 58, 59, 84, 86, 87, 90, 95, 97, 108, 110, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 146, 169], "collect": [12, 27, 28, 30, 32, 34, 75, 81, 88, 104, 153], "either": [12, 16, 19, 22, 32, 34, 36, 42, 48, 50, 55, 64, 66, 70, 71, 75, 77, 82, 84, 88, 94, 96, 97, 98, 104, 109, 111, 115, 116, 123, 124, 125, 127, 135, 140, 142, 144, 149, 151, 158, 162, 164, 167, 170], "clone": [12, 20, 25, 26, 45, 56, 58, 59, 62, 85, 99, 105, 114, 118, 135, 136, 137, 165], "git": [12, 13, 25, 26, 27, 28, 56, 59, 62, 96, 105, 116, 129], "navig": [12, 31, 58, 153], "green": [12, 18, 19, 63, 70, 75, 82, 116, 164], "button": [12, 13, 30, 55, 63, 126], "download": [12, 13, 30, 31, 32, 39, 40, 42, 48, 55, 59, 61, 62, 93, 99, 105, 127, 128, 138, 160, 164, 165, 166], "zip": [12, 55, 59], "illustr": [12, 27, 32, 34, 38, 46, 48, 49, 55, 70, 71, 75, 77, 114, 122, 123, 127, 129, 140, 142, 153, 154, 164], "variou": [12, 19, 22, 24, 32, 36, 41, 46, 52, 58, 71, 72, 75, 82, 84, 94, 108, 110, 111, 115, 125, 140, 147, 151, 154, 158], "visibl": [12, 13, 46, 55, 114, 153], "render": [12, 24, 34, 46, 55, 63, 168], "advantag": [12, 19, 36, 47, 64, 81, 97, 110, 116, 142], "independ": [12, 25, 32, 36, 37], "contact": [12, 93, 96, 105], "u": [12, 13, 16, 26, 31, 34, 36, 37, 51, 52, 59, 60, 62, 64, 86, 93, 96, 102, 105, 106, 107, 108, 113, 126, 140, 149, 152, 158, 166], "storm": [12, 17, 26, 27, 48, 123, 126, 127, 128, 129, 131, 132, 133], "surg": [12, 17, 26, 27, 48, 123, 126, 127, 128, 129, 132, 158], "empti": [12, 36, 47, 103, 106, 109, 111, 118, 148, 151, 158, 164], "gitmodul": 12, "pull": [12, 26, 28, 31, 58, 59, 61, 93, 101, 116, 122, 125, 126, 132, 135, 140], "request": [12, 26, 28, 32, 36, 37, 47, 58, 61, 77, 88, 93, 94, 98, 101, 103, 116, 118, 125, 127, 132, 140, 151, 158, 164], "init": [12, 27, 30, 42, 48, 56, 59, 61, 143, 151], "leav": [12, 13, 16, 47, 62, 149, 164], "off": [12, 13, 47, 52, 55, 63, 71, 84, 91, 98, 115, 135, 149, 164], "won": [12, 13, 70, 89, 164], "hurt": [12, 67], "maintain": [12, 30, 110, 127, 149, 162, 167], "flavor": [12, 23, 97], "demonstr": [12, 27, 93, 99], "agre": [12, 30, 42, 57, 140, 161, 164, 167], "seen": [12, 24, 34, 38, 39, 40, 52, 76, 101, 148, 153], "cloud": 13, "elast": [13, 75], "sign": [13, 26, 82, 132, 158], "account": [13, 26, 30, 59, 90, 99, 139], "750": 13, "free": [13, 55, 66, 75, 86, 90, 101, 105, 107], "micro": 13, "suffici": [13, 16, 18, 19, 22, 36, 47, 75, 76, 77, 113, 119, 135, 148, 151], "tier": 13, "inform": [13, 14, 24, 27, 34, 35, 37, 38, 39, 49, 50, 51, 52, 53, 54, 62, 67, 77, 82, 83, 84, 88, 89, 94, 96, 98, 99, 100, 102, 103, 109, 111, 124, 127, 128, 130, 136, 138, 139, 140, 143, 146, 148, 149, 151, 158, 161, 162, 165, 166, 167, 168], "uw": [13, 26], "escienc": 13, "aw": 13, "tutori": [13, 31, 59, 84, 87, 91, 96, 105, 111, 114], "gear": 13, "faq": [13, 27, 81], "price": 13, "charg": 13, "per": [13, 32, 37, 47, 49, 55, 63, 71, 76, 97, 149], "thereof": 13, "regardless": [13, 37, 42, 70, 115, 148], "cpu": [13, 56, 124, 127, 129, 161], "consol": [13, 98, 151], "tab": [13, 58, 138], "east": [13, 162], "cheaper": 13, "rate": 13, "menu": [13, 20, 27, 58, 63, 118, 126, 135, 136, 137, 138, 143, 166], "imag": [13, 38, 39, 42, 59, 63, 70, 116, 127, 142], "platform": [13, 55, 91, 99, 110, 116], "finish": [13, 82, 88], "load": [13, 63, 98, 100, 103, 109, 116, 164, 168], "databas": [13, 32, 75, 109, 113, 127, 162], "uwamath": 13, "bar": [13, 58, 158], "screen": [13, 30, 55, 63, 91, 98, 99, 124, 150, 152], "shapshot": 13, "machin": [13, 27, 76, 78, 116, 125, 146], "disk": [13, 47, 88, 97, 98, 116, 125], "ubuntu": 13, "linux": [13, 74, 85, 107, 116, 146], "popup": 13, "look": [13, 14, 24, 27, 30, 32, 42, 55, 58, 59, 63, 71, 82, 84, 89, 94, 99, 103, 104, 108, 109, 111, 116, 120, 127, 136, 142, 148, 149, 151, 161, 164, 165], "sort": [13, 42, 127, 147, 165], "larger": [13, 22, 34, 49, 55, 63, 75, 76, 77, 82, 94, 119, 125, 132, 149, 151, 162], "cost": [13, 104], "continu": [13, 24, 30, 32, 51, 53, 58, 86, 110, 118, 140, 148, 170], "eventu": [13, 48, 130], "don": [13, 29, 30, 58, 59, 82, 97, 98, 99, 105, 116, 150, 165], "pair": [13, 51, 97, 116, 164], "secur": 13, "quick": [13, 27, 39, 48, 50, 60, 85, 116, 160], "close": [13, 42, 55, 58, 63, 70, 71, 97, 115, 118, 130, 149, 158], "back": [13, 29, 31, 58, 59, 126], "statu": [13, 30, 54, 91, 108], "wait": 13, "until": [13, 34, 64, 70, 137, 144], "refresh": [13, 47], "bottom": [13, 15, 19, 32, 38, 39, 48, 52, 68, 70, 75, 88, 101, 102, 125, 126, 145, 156, 157], "scroll": 13, "down": [13, 32, 98, 124, 158, 162, 164], "dn": 13, "screenshot": [13, 55], "rjlkei": 13, "pem": 13, "abl": [13, 58, 111], "ssh": [13, 30], "keypair": 13, "50": [13, 17, 34, 51, 55, 72, 104, 120, 150], "19": [13, 17, 26, 133, 134, 138, 161], "75": [13, 17, 92, 108, 142], "229": 13, "amazonaw": 13, "gfortran": [13, 62, 76, 85, 87, 107, 118, 146, 165], "ipython": [13, 78, 82, 84, 89, 90, 96, 98, 105, 108, 111, 123, 124], "scipi": [13, 37, 89, 110, 137, 158, 164], "netcdf": [13, 37, 44, 48, 124, 127, 129, 131, 158, 164, 166], "apach": 13, "server": [13, 31, 42, 55, 58, 59, 70, 127, 162, 166], "apt": [13, 85], "fetch": [13, 51], "bring": [13, 55, 58, 71, 151], "master": [13, 15, 27, 31, 58, 59, 62, 101, 112, 118, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 141, 145, 156, 157], "make_lib": 13, "compil": [13, 18, 19, 27, 38, 39, 43, 50, 62, 67, 76, 78, 84, 85, 89, 96, 97, 101, 105, 109, 118, 119, 140, 141, 146], "bashrc": [13, 44, 107, 146], "Of": [13, 28, 75, 108, 113, 162], "cours": [13, 28, 34, 47, 50, 64, 75, 99, 100, 108, 110, 113, 151, 162], "tar": [13, 129, 138], "instruct": [13, 19, 20, 26, 27, 38, 39, 42, 55, 56, 58, 59, 88, 90, 96, 99, 105, 108, 111, 118, 126, 133, 135, 136, 137, 138, 139, 165], "window": [13, 32, 71, 84, 146], "respons": [13, 52, 88, 103], "pretti": 13, "slow": [13, 55, 98, 107], "_plot": [13, 38, 39, 47, 71, 84, 118, 147, 153], "local": [13, 17, 19, 22, 27, 30, 55, 58, 63, 66, 67, 71, 92, 94, 101, 106, 125, 127, 136, 144, 162, 164, 167], "sftp": 13, "much": [13, 19, 30, 34, 36, 44, 49, 55, 77, 78, 81, 85, 110, 115, 119, 123, 130, 135, 136, 142, 148, 151, 161, 164], "smaller": [13, 36, 55, 68, 78, 94, 98, 119, 135, 144, 148, 150, 151, 152, 164], "quicker": [13, 142], "browser": [13, 30, 31, 38, 39, 55, 58, 153], "explain": [13, 19, 34, 52, 70, 132, 148, 153], "webserv": 13, "inbound": 13, "port": [13, 31, 95, 96, 101, 149], "22": [13, 26, 149, 164], "80": [13, 17, 55, 99, 142], "drop": [13, 18, 19, 58, 85, 130, 132, 144, 148], "tcp": 13, "Then": [13, 16, 30, 31, 32, 36, 47, 58, 59, 60, 67, 70, 75, 76, 84, 88, 91, 99, 105, 106, 107, 111, 118, 140, 142, 164, 165], "someth": [13, 29, 30, 58, 66, 74, 81, 98, 103, 104, 111, 118, 162, 165, 167], "shot": 13, "ln": 13, "expos": [13, 78], "home": [13, 31, 32, 62, 146], "scp": 13, "TO": [13, 65, 86], "send": [13, 26, 101, 140], "remot": [13, 55, 59, 127, 164, 166], "rel": [13, 18, 19, 22, 32, 43, 50, 52, 55, 75, 76, 82, 96, 109, 111, 116, 118, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 143, 149, 151, 153, 162, 166], "end": [13, 31, 32, 34, 35, 36, 47, 51, 55, 59, 63, 91, 98, 102, 108, 110, 113, 115, 118, 124, 125, 127, 139, 141, 142, 150, 152, 158, 161], "retriev": [13, 37, 51, 84, 89, 104, 164, 166], "sit": 13, "idl": 13, "action": [13, 14, 89], "restart": [13, 27, 47, 77, 84, 96, 118, 124, 125, 126, 127, 129, 132, 136, 148, 150, 152], "later": [13, 36, 37, 42, 54, 55, 62, 84, 104, 139], "But": [13, 19, 34, 42, 55, 72, 82, 107, 120, 127, 144, 146], "futur": [13, 24, 27, 28, 38, 39, 42, 49, 52, 57, 63, 68, 88, 104, 110, 124, 125, 127, 130, 136, 149, 158, 162], "job": [13, 134], "eb": 13, "runclaw": [14, 54, 118, 120, 129, 131, 137, 140], "autom": [14, 58, 89, 116], "certain": [14, 34, 48, 61, 70, 98, 115, 124, 142, 148], "keep": [14, 27, 30, 34, 35, 37, 38, 39, 76, 88, 91, 96, 106, 109, 116, 120], "log": [14, 27, 30, 31, 94, 95, 96, 103, 104], "came": 14, "rundir": [14, 91], "environ": [14, 18, 19, 27, 30, 38, 39, 40, 43, 54, 55, 58, 61, 62, 71, 74, 76, 78, 100, 107, 109, 111, 125, 164, 165], "noth": [15, 64, 106, 128, 145, 156, 157, 164, 167], "rememb": [15, 29, 76, 82, 99, 145, 156, 157], "b4step1": [15, 67, 167], "b4step2": [15, 145, 167], "b4step3": 15, "branch": [15, 20, 27, 31, 44, 54, 56, 59, 61, 62, 112, 116, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 145, 156, 157], "tag": [15, 55, 59, 61, 112, 145, 149, 150, 156, 157], "bathymetri": [15, 48, 52, 55, 63, 102, 113, 125, 127, 141, 143, 145, 151, 162, 164], "area": [15, 24, 48, 104, 113, 125, 144, 145], "dy": [15, 51, 57, 63, 64, 77, 89, 94, 98, 123, 127, 145, 162, 164], "capac": [15, 102, 145, 148, 149, 150, 152], "length": [15, 32, 37, 49, 52, 63, 75, 101, 106, 125, 132, 145, 148, 149, 150, 151, 167], "latter": [15, 18, 47, 70, 72, 101, 130, 142, 145, 148, 158, 167], "quantiti": [15, 18, 19, 34, 37, 63, 71, 72, 91, 95, 96, 102, 106, 141, 145, 151], "coordinate_system": [15, 18, 49, 64, 145, 151], "impos": [16, 89, 115, 156, 157, 170], "chapter": [16, 140, 148, 167], "choic": [16, 48, 81, 104, 148, 150, 151, 152, 167], "bc_lower": [16, 88, 101, 108, 148, 150, 152], "bc_upper": [16, 88, 101, 108, 148, 150, 152], "extrap": [16, 101, 108, 148, 150], "outflow": [16, 148, 150, 152], "move": [16, 34, 38, 39, 48, 58, 62, 64, 75, 101, 115, 119, 121, 126, 151, 154, 162, 163], "normal": [16, 19, 35, 36, 56, 58, 64, 82, 101, 111, 140, 141, 148, 149, 150, 151, 152], "fairli": [16, 52, 125], "good": [16, 19, 30, 52, 55, 65, 76, 86, 108, 113, 116, 125, 132, 140], "outgo": 16, "let": [16, 48, 62, 86, 113, 126, 132, 140], "without": [16, 24, 35, 43, 47, 52, 63, 65, 66, 67, 70, 71, 82, 84, 86, 92, 96, 97, 98, 109, 111, 116, 136, 142, 146, 150, 152, 158, 165, 167], "particularli": [16, 19, 29, 31, 34, 36, 54, 55, 60, 61, 62, 75, 77, 111, 120, 123, 127, 132, 136, 144, 162], "perfect": 16, "hit": [16, 17, 36, 71, 77, 84, 98, 148], "obliqu": 16, "perfectli": 16, "wall": [16, 44, 101, 108, 124, 127, 129, 148, 150, 152, 161], "veloc": [16, 34, 36, 51, 64, 71, 84, 101, 102, 108, 125, 135, 143, 148, 149, 150, 151, 152, 167], "momentum": [16, 18, 34, 36, 37, 52, 64, 68, 98, 132, 141, 151, 154, 162], "third": [16, 18, 19, 34, 57, 92, 161, 164], "acoust": [16, 31, 38, 39, 52, 87, 88, 91, 93, 96, 104, 105, 123, 140, 150, 167], "p": [16, 17, 31, 84, 86, 88, 94, 97, 98, 102, 106, 118, 140, 170], "hu": [16, 18, 19, 36, 37, 64, 68, 102, 141, 151], "hv": [16, 19, 36, 37, 64, 68, 141, 151], "equal": [16, 19, 32, 34, 35, 36, 37, 49, 51, 55, 72, 75, 77, 99, 101, 115, 139, 142, 148, 150, 152, 162, 164], "far": [16, 18, 19, 41, 45, 70, 81, 128, 130, 132, 135], "symmetri": [16, 49], "physic": [16, 19, 47, 49, 55, 89, 94, 96, 108, 115, 170], "slightli": [16, 19, 42, 57, 125, 126, 132, 142], "complic": [16, 82, 89, 142, 147], "alwai": [16, 19, 24, 28, 29, 30, 34, 36, 37, 44, 57, 58, 62, 71, 88, 97, 114, 115, 119, 120, 132, 136, 144, 148, 150, 152, 162, 167], "alon": [16, 55], "topographi": [16, 17, 19, 27, 34, 35, 36, 37, 47, 48, 49, 52, 57, 63, 68, 72, 75, 83, 113, 114, 118, 119, 120, 121, 123, 124, 127, 130, 133, 136, 142, 143, 144, 156, 157, 163], "artifici": [16, 144], "ignor": [16, 49, 55, 63, 97, 123, 132, 143, 164], "incom": 16, "truncat": [16, 36, 77, 97, 148], "spuriou": [16, 34, 116], "extropl": 16, "dry": [16, 17, 27, 34, 48, 102, 130, 133, 141, 144], "land": [16, 42, 48, 50, 55, 58, 59, 63, 70, 72, 83, 130, 144, 151, 164], "tank": [16, 49, 52], "bc2amr": [16, 127], "calhounhelzellevequ": 16, "envis": 16, "fold": 16, "piec": [16, 52, 94], "glu": 16, "inflat": 16, "websit": [16, 55, 58, 97, 153, 164], "bergercalhounhelzellevequ": 16, "hint": [16, 27, 48, 81, 84, 111, 151, 165], "suppos": [16, 67, 70, 71, 82, 111, 115], "bit": [16, 24, 32, 59, 97, 99, 107, 141], "examin": [16, 38, 39, 47, 70, 111, 135], "own": [16, 22, 26, 30, 36, 62, 88, 89, 95, 96, 105, 106, 113, 115, 127, 140, 153], "todo": [16, 140, 158, 164, 170], "poster": 17, "resourc": [17, 26, 30, 50, 110], "bale": 17, "rossmanith": 17, "siam": [17, 26, 27, 96, 140], "sci": 17, "24": [17, 55, 72, 142], "2002": 17, "955": [17, 142], "978": 17, "author": [17, 27, 48, 52, 92, 96, 97, 102, 114], "1989": 17, "hydrodynam": 17, "phy": 17, "82": 17, "64": [17, 94, 97, 99, 107], "84": [17, 55], "34": [17, 55, 63, 96], "2011": [17, 26, 86], "pp": 17, "1195": 17, "1206": 17, "adv": 17, "awr11": 17, "1998": 17, "anal": 17, "35": [17, 34, 57, 75, 96], "2298": 17, "2316": 17, "bergerleveque2023": [17, 18, 19, 49], "2023": [17, 45, 118, 136, 137, 138], "implicit": [17, 19, 86, 104], "dispers": [17, 18, 48, 49, 52], "submit": 17, "1984": 17, "partial": [17, 78, 113], "differenti": [17, 32], "53": 17, "484": 17, "512": 17, "rigoutso": 17, "1991": 17, "ieee": 17, "tran": 17, "sy": [17, 42, 70, 91, 150, 152], "man": [17, 27, 48, 52, 151, 156, 157], "cyber": 17, "21": [17, 71, 92, 94, 123, 124, 138], "1278": 17, "1286": 17, "2018": [17, 26, 58, 127, 128, 138], "phd": 17, "thesi": [17, 104], "pure": [17, 56, 84, 94, 96, 97, 99, 104, 116, 141], "appl": 17, "geophi": 17, "173": 17, "4055": 17, "4074": 17, "info": [17, 31, 32, 35, 36, 37, 47, 59, 63, 71, 91, 94, 97, 98, 104, 125, 135, 149, 150, 158], "analysi": 17, "evalu": [17, 29, 32, 36, 37, 68, 72, 88, 94, 104, 164, 167], "preprint": 17, "2000": [17, 57, 162, 164], "165": [17, 161], "126": [17, 164], "166": 17, "leveque96": 17, "1996": 17, "advect": [17, 82, 96, 99, 140, 141, 152, 167], "incompress": 17, "leveque1996": 17, "33": [17, 94, 142], "627": 17, "665": 17, "1997": [17, 96], "multi": [17, 55, 88, 119, 121, 124, 127, 167], "131": [17, 96], "327": [17, 96], "353": [17, 96], "wpalg": 17, "cambridg": 17, "press": [17, 99, 105], "uk": [17, 32], "fvmhp_materi": 17, "acta": 17, "numerica": 17, "211": 17, "289": 17, "dg": 17, "actanum2011": 17, "techniqu": [17, 28], "2013": [17, 26, 96], "a351": [17, 96], "a377": [17, 96], "manuel": [17, 86, 96], "quezada": [17, 86, 96], "luna": [17, 86, 96], "matthew": [17, 86, 96], "kneplei": [17, 86, 96], "emmett": [17, 86, 96], "2012": [17, 24, 26, 52, 96], "scalabl": [17, 96], "c210": [17, 96], "c231": [17, 96], "sisc": [17, 96], "month": [17, 55, 96], "nov": [17, 96], "kimetal2017": [17, 19], "kim": [17, 19], "pedersen": 17, "lovholt": 17, "boussinesq": [17, 27, 48, 49, 52, 118, 137], "studi": [17, 19, 52, 68], "break": [17, 18, 30, 32, 48, 52, 55, 63, 75, 116, 124, 144, 151, 164], "phenomena": [17, 19], "long": [17, 18, 19, 30, 32, 49, 51, 52, 55, 63, 74, 96, 124, 132, 149, 164], "coastal": [17, 52, 130, 143, 144, 151, 162], "engin": [17, 55], "122": [17, 42, 70, 142, 164], "2017": [17, 26, 59, 102, 125, 126, 127, 138], "86": 17, "1016": 17, "coastaleng": 17, "005": 17, "kim201775": 17, "jihwan": [17, 19], "geir": 17, "finn": 17, "vholt": 17, "mandlietal2016": 17, "googl": [17, 26, 27, 30, 42, 48, 51, 63, 70, 93, 97, 99, 107, 123, 125, 133, 140, 142], "scholar": 17, "hundr": [17, 36], "calhellev08": 17, "helzel": 17, "circular": 17, "spheric": [17, 49, 55, 118, 137], "review": [17, 92], "2008": [17, 86, 92, 102], "723": 17, "752": 17, "leveque09": 17, "reproduc": [17, 57, 65, 86], "cise": 17, "11": [17, 34, 82, 102, 131, 132, 138], "2009": [17, 92, 97, 102], "27": [17, 55, 63, 72, 142], "levyon03": 17, "darryl": 17, "yong": 17, "solitari": 17, "layer": [17, 27, 47, 63, 94, 119, 121, 124, 125, 127], "media": 17, "math": [17, 51, 55, 108], "63": [17, 142], "2003": 17, "1539": 17, "1560": 17, "mandli13a": 17, "72": [17, 55, 75], "91": 17, "2013it": 17, "aug": [17, 128], "mandli13b": 17, "dawson": 17, "36": [17, 51, 77, 94], "2014": [17, 26, 102, 117, 119, 120, 121, 122, 123, 138], "clint": 17, "okada85": [17, 32, 75], "okada": [17, 27, 32, 48, 49, 114, 162, 166], "deform": [17, 32, 35, 37, 48, 75, 166], "due": [17, 26, 32, 42, 51, 75, 116, 126, 127, 132, 144, 154, 165], "shear": [17, 32], "tensil": 17, "fault": [17, 27, 32, 48, 49, 114, 127, 134, 162, 166], "bull": [17, 32], "seism": [17, 32], "soc": [17, 32], "am": [17, 32], "1985": [17, 32], "1135": 17, "1154": 17, "repositori": [18, 19, 24, 26, 27, 28, 31, 39, 40, 45, 46, 48, 49, 56, 61, 62, 66, 67, 96, 104, 111, 113, 114, 116, 122, 125, 138, 155], "literatur": [18, 19, 52, 140], "situat": [18, 19, 49, 55, 70, 71, 132], "wavelength": [18, 19, 49, 52], "fluid": [18, 19, 34, 36, 49, 52, 64, 72, 118, 143], "swe": [18, 48], "deriv": [18, 19, 65, 75, 86, 91, 95, 96, 106, 116], "longer": [18, 19, 22, 30, 47, 58, 59, 63, 85, 110, 125, 127, 130, 132, 136, 137, 139, 140, 151, 162, 166], "respect": [18, 32, 34, 49, 55, 63, 96, 97, 102, 164], "txx": 18, "altern": [18, 19, 32, 35, 36, 38, 39, 47, 48, 51, 55, 60, 66, 71, 81, 96, 99, 111, 115, 118, 123, 124, 125], "ellipt": [18, 19], "involv": [18, 19, 26, 101, 104, 113, 154, 159], "xx": [18, 118], "tridiagon": 18, "sgn": [18, 48], "serr": [18, 19], "naghdi": [18, 19], "madsen": [18, 48], "sorensen": [18, 48], "properti": [18, 32, 37, 49, 64, 71, 88, 91, 94, 103, 106, 164], "less": [18, 19, 42, 52, 55, 64, 68, 76, 104, 115, 116, 132, 148], "stabl": [18, 19, 85, 94, 132], "plane": [18, 32, 49, 75, 124, 142, 166], "planar": [18, 49, 75, 140, 141], "axisymmetr": [18, 49], "sphere": [18, 27, 32, 48, 49, 51, 89, 118, 120, 136, 137, 141, 151], "topo": [18, 27, 34, 35, 42, 48, 49, 52, 55, 57, 63, 70, 72, 83, 111, 118, 119, 121, 127, 129, 132, 136, 143, 151, 162, 164], "dtopo": [18, 27, 32, 35, 48, 52, 57, 63, 75, 111, 119, 121, 122, 130, 132, 144, 151, 162, 164, 166], "ident": [18, 42, 67, 94, 97, 99, 116, 164], "bouss_": 18, "templat": [18, 89], "bouss": [18, 19, 49, 118], "lapack": [18, 19, 118, 119], "fflag": [18, 19, 30, 43, 66, 76, 89, 109, 162], "llapack": [18, 107], "lbla": [18, 107], "explicit": [18, 109, 149], "lapack_tridiag": 18, "soubroutin": 18, "bla": [18, 19, 118], "bouss_wavetank_matsuyama": 18, "openmp": [18, 24, 27, 44, 78, 109, 115, 124, 130, 161], "somewher": [18, 19, 123], "boussdata1d": 18, "add_data": [18, 19], "bouss_data": [18, 19], "deepbouss": 18, "switch": [18, 31, 48, 55, 62, 101, 111, 116, 118, 126, 143, 166], "bouss_equ": [18, 19], "alpha": [18, 19, 55, 59, 104], "153": [18, 19], "hardwir": [18, 19, 76], "bouss_modul": [18, 19], "tip": [18, 19, 26, 48, 62, 81, 95, 96, 101, 110], "similarli": [18, 36, 43, 56, 93, 99, 101, 142, 161], "bparam": [18, 19], "15": [18, 19, 34, 42, 57, 59, 63, 70, 75, 94, 142, 150, 161, 164], "caus": [18, 19, 24, 36, 52, 55, 58, 65, 66, 72, 78, 84, 86, 107, 116, 124, 125, 126, 128, 132, 147, 149, 162, 164], "revert": [18, 19, 55], "nondispers": [18, 19], "bouss_min_depth": [18, 19], "criterion": [18, 19, 34, 115, 150], "onshor": [18, 19, 34, 49, 63, 68, 70, 142, 144], "nearest": [18, 19, 37, 42, 47, 164], "omit": [18, 19, 62, 116, 118, 125, 139, 151], "unknown": [18, 19, 32, 106], "inund": [18, 19, 34, 48, 49, 55, 68, 115, 130, 143, 166], "shore": [18, 19, 36, 42, 48, 115, 130, 144], "simplest": [18, 19, 62, 74, 108], "known": [19, 34, 44, 71, 75, 76, 82, 105, 107, 116, 126, 148], "landslid": [19, 52], "realist": [19, 55], "test": [19, 24, 27, 32, 38, 41, 44, 54, 55, 59, 60, 61, 62, 68, 81, 86, 87, 89, 95, 96, 102, 109, 110, 115, 120, 124, 125, 126, 127, 130, 132, 136, 140, 152, 158, 161, 162, 164], "One": [19, 25, 27, 28, 32, 34, 47, 48, 55, 58, 64, 70, 71, 72, 89, 109, 115, 118, 123, 164], "momenta": [19, 64], "effici": [19, 52, 56, 86, 96, 97, 98, 106, 115, 142, 149], "consider": [19, 52, 88], "oper": [19, 53, 116, 125], "spars": [19, 118], "huc": 19, "hvc": 19, "expand": [19, 28, 42, 55, 63], "petsc": [19, 24, 25, 78, 86, 88, 95, 98, 105, 106, 107, 109, 118], "mpi": [19, 78, 99, 118], "prerequesit": 19, "simplic": 19, "practic": [19, 30, 111, 113, 154], "variant": [19, 22, 60, 109, 116, 118], "tune": [19, 28, 149], "match": [19, 32, 36, 41, 55, 63, 97, 103, 116, 158, 164], "airi": 19, "theori": [19, 65, 86, 170], "incorpor": [19, 24, 52, 58, 86, 104, 119, 126, 141, 164], "bonneton": 19, "et": 19, "al": 19, "histor": [19, 52, 75, 166], "boussclaw": 19, "successfulli": [19, 66, 103], "reveal": [19, 47, 108], "stabil": [19, 104, 132, 148], "report": [19, 26, 32, 34, 54, 111, 116, 124, 127, 146, 148, 150], "except": [19, 24, 29, 32, 42, 49, 97, 102, 109, 130, 137, 148, 151, 158, 162], "investig": [19, 116], "radial_flat": 19, "num_eqn": [19, 77, 88, 89, 92, 97, 99, 101, 102, 103, 106, 108, 140, 148, 150, 152, 167], "facilit": [19, 47, 64, 96, 116, 123, 125, 130, 136, 153, 158], "boussdata": 19, "bouss_min_level": 19, "bouss_max_level": 19, "bouss_solv": 19, "bouss_tstart": 19, "avoid": [19, 42, 55, 58, 63, 66, 71, 94, 98, 115, 118, 119, 120, 124, 125, 132, 134, 139, 148, 151, 170], "altogeth": 19, "neighborhood": 19, "recogn": [19, 50, 57, 62, 162], "extrem": [19, 55, 107], "motion": [19, 75, 162], "did": [19, 127, 132, 142, 162], "petsc_dir": [19, 99], "petsc_arch": [19, 99], "shell": [19, 30, 61, 62, 76, 82, 84, 99, 105, 108, 111, 125, 146], "dhave_petsc": 19, "petsc_opt": 19, "options_fil": 19, "petscmpiopt": 19, "adequ": [19, 52], "briefli": [19, 170], "gmre": 19, "krylov": 19, "algebra": 19, "multigrid": 19, "precondition": 19, "manualpag": 19, "ksp": 19, "kspsetfromopt": 19, "pc": 19, "pcsetfromopt": 19, "ex": [19, 38, 39, 91, 118], "xgeoclaw": 19, "runex": [19, 118], "bin": [19, 47, 99, 139], "mpiexec": [19, 99], "word": [19, 98, 127, 158], "process": [19, 27, 36, 38, 39, 48, 55, 56, 75, 88, 93, 94, 99, 105, 106, 109, 116, 118, 125, 135, 137, 148, 165], "incorrectli": [19, 124], "configur": [19, 82, 88, 99, 164], "environment": 19, "implicitamr": 19, "accompani": [19, 20, 23, 118, 135, 136, 137], "march": [20, 26, 27, 34, 41, 42, 48, 119, 120, 138, 142], "29": [20, 138], "featur": [20, 24, 27, 30, 34, 42, 55, 58, 71, 82, 89, 115, 116, 118, 122, 124, 125, 127, 132, 135, 136, 137, 138, 158, 162], "dev": [20, 26, 30, 58, 59, 99, 118, 127, 128, 133, 134, 135, 136, 137, 138], "diff": [20, 54, 59, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "tarfil": [20, 59, 62, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "pip": [20, 27, 30, 55, 59, 60, 90, 96, 99, 105, 107, 111, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 146], "doc": [20, 25, 26, 30, 32, 55, 59, 92, 109, 110, 111, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 155], "docker": [20, 27, 59, 60, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 169], "migrat": 21, "intermedi": [21, 34, 37, 75, 139, 167], "easiest": [21, 30, 44, 78, 82, 84, 115, 167], "bulk": [21, 88, 102, 108, 140, 150, 167], "convers": [21, 27, 89, 97, 115, 142, 162, 166], "convert43to46": 21, "inspect": [21, 22, 55], "broken": [21, 22, 30, 75, 116], "renam": [22, 24, 38, 39, 66, 101, 104], "achiev": [22, 89, 156, 157], "convert46to50": 22, "_4": 22, "complet": [22, 24, 30, 51, 66, 84, 88, 89, 99, 109, 116, 137], "delet": [22, 30, 58, 62, 137], "combin": [22, 58, 63, 124, 166], "properli": [22, 34, 38, 39, 42, 43, 52, 55, 57, 58, 62, 63, 70, 74, 77, 91, 116, 119, 122, 127, 130, 132, 146, 148, 151, 154, 162, 164, 165, 167], "permut": 22, "th": [22, 24, 47, 140, 167], "reorder": [22, 24], "pattern": [22, 50, 55, 143], "carefulli": [22, 24, 68], "setaux": [22, 24, 67, 89, 119, 120, 140, 148, 150, 152], "sequenc": [22, 24, 36, 37, 67, 70, 72, 99, 105, 108, 109, 116, 119, 126, 140, 167], "maxmx": [22, 89], "maxmi": [22, 89], "maxmz": 22, "declar": [22, 24, 106, 132, 167], "memori": [22, 24, 76, 77, 78, 88, 91, 98, 106, 132, 149, 150], "alloc": [22, 104, 123, 132, 149], "mx": [22, 24, 49, 57, 77, 89, 99, 102, 140, 150, 162, 167], "resp": [22, 32, 132], "mz": [22, 24], "driver": [22, 67], "led": [22, 128], "homepag": [23, 27], "reorgan": [24, 89, 117, 133], "changelog": [24, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 138], "concern": [24, 48, 149], "evolv": [24, 88, 91, 104], "organ": [24, 25, 38, 39, 91], "affect": [24, 66, 125, 126, 132, 135, 137, 148, 162, 165], "assist": [24, 130], "older": [24, 44, 56, 58, 61, 62, 104, 118, 131, 135, 138, 149], "compris": [24, 96, 164], "webpag": [24, 26, 38, 39, 45, 50, 55, 59, 66, 128, 143], "primari": [24, 30, 31, 48, 113, 116, 158], "auxiliari": [24, 89, 91, 97, 102, 103, 104, 106, 140, 148, 150, 152, 167], "cach": [24, 51, 59, 84, 86, 130, 149], "stride": [24, 164], "contingu": 24, "maux": [24, 140, 167], "ma": [24, 36, 42, 70, 142, 164], "relev": [24, 29, 42, 44, 48, 55, 58, 97, 115, 116, 158], "flexibl": [24, 32, 63, 89, 123, 126, 140, 142, 149], "clean": [24, 58, 59, 109, 118, 123, 127, 137], "systemat": 24, "obscur": 24, "clarifi": 24, "regress": [24, 27, 30, 54, 96, 99, 125, 126, 160], "travi": [24, 132], "miss": [24, 27, 97, 118, 129, 136, 137, 154, 158, 162, 164, 165], "conform": [24, 30, 35, 103, 127, 162], "construct": [24, 32, 34, 57, 72, 88, 94, 109, 136, 158, 159, 162], "visit": [24, 27, 81, 138], "gui": [24, 168], "monitor": [24, 27, 35, 36, 41, 48, 70, 72, 76, 120, 122, 125, 135], "arriv": [24, 34, 36, 42, 48, 125, 143, 144], "fgmax": [24, 27, 36, 41, 48, 63, 72, 76, 120, 122, 125, 126, 130, 131, 135, 136, 137, 151], "ndim": [24, 77, 84, 148, 149], "num_dim": [24, 41, 94, 97, 101, 148, 149, 150, 152], "zlower": 24, "yupper": [24, 150, 164], "zupper": 24, "upper": [24, 34, 35, 41, 49, 92, 94, 101, 142, 148, 150, 152, 162, 164], "mxnest": 24, "neg": [24, 42, 144, 151, 162, 164], "ins": 24, "forc": [24, 27, 43, 48, 66, 70, 109, 115, 130, 141, 144, 149, 159, 164, 165], "prohibit": 24, "again": [24, 43, 66, 70, 75, 82, 84, 88, 89, 98, 102, 107, 111, 127, 133, 162, 165], "2d_grid": 24, "attirbut": 24, "gridlines_show": 24, "grideges_show": 24, "openli": 25, "super": [25, 30, 127, 164], "util": [25, 27, 30, 37, 48, 55, 77, 81, 84, 96, 111, 116, 118, 147, 163, 164, 165], "graphic": [25, 30, 56, 71, 81, 135], "visual": [25, 26, 30, 36, 38, 39, 47, 48, 61, 62, 71, 77, 78, 81, 96, 100, 101, 111, 118, 123, 130, 168], "web": [25, 27, 30, 38, 39, 55, 58, 59, 127, 153, 164], "latest": [25, 27, 46, 55, 58, 59, 61, 62, 90, 99, 105, 118, 120, 124], "legaci": [25, 59, 62], "welcom": [26, 86], "answer": 26, "question": [26, 30, 51, 103], "slack": 26, "channel": [26, 45], "workspac": [26, 71, 106], "join": [26, 82], "experi": [26, 52, 104, 137, 154], "warn": [26, 30, 97, 98, 104, 118, 132, 148, 165], "activ": [26, 34, 36, 41, 58, 104, 113, 151], "gitter": 26, "post": [26, 27, 28, 30, 36, 55, 99, 133, 134, 135, 148, 153], "ask": 26, "twitter": 26, "rais": [26, 32, 62, 97, 103, 105, 109, 158, 164], "photo": [26, 27], "ve": [26, 90, 105, 108], "fork": [26, 58, 59], "track": [26, 27, 30, 34, 35, 36, 47, 48, 55, 58, 60, 62, 76, 88, 96, 109, 116, 119, 128, 130, 133, 135, 141, 158], "youtub": [26, 113, 130], "video": [26, 113, 130], "introductori": 26, "webinar": 26, "csdm": 26, "2019": [26, 56, 128, 129, 130, 138], "randi": [26, 32, 92, 94], "plan": [26, 30, 52, 60, 61, 62, 68, 97, 104, 136, 158], "schedul": 26, "2020": [26, 27, 58, 65, 110, 113, 130, 131, 132, 138, 140], "annual": 26, "meet": 26, "took": 26, "onlin": [26, 110, 114, 127, 155, 162], "covid": 26, "four": [26, 72, 94, 115, 116], "short": [26, 49, 52, 101, 132], "slide": 26, "tulan": 26, "clifford": 26, "lectur": 26, "april": [26, 130, 131, 138], "minisymposterium": 26, "cse": 26, "confer": 26, "februari": [26, 126, 132, 133, 138], "boulder": 26, "2015": [26, 59, 102, 123, 124, 125, 138], "summari": [26, 27, 45, 59, 127, 148, 149, 150, 151], "tackl": [26, 30], "progress": [26, 30, 104, 113, 118, 123, 162, 164], "held": [26, 52], "zoom": [26, 55], "conjunct": [26, 42, 70, 97, 115], "23": [26, 130, 131, 138, 149], "25": [26, 34, 42, 45, 57, 70, 75, 88, 94], "28": [26, 122, 123, 126, 127, 128, 129, 130, 138], "unives": 26, "colorado": 26, "immedi": [26, 52, 71, 88, 90, 91, 98], "august": [26, 127, 135, 136, 138], "utah": 26, "hpc": 26, "swag": 26, "introduct": 27, "commit": [27, 32, 54, 58, 59, 116], "licens": [27, 48, 52, 96, 114, 127], "cite": [27, 59, 61, 138], "fund": [27, 60, 96], "troubleshoot": [27, 60, 61, 96], "amazon": 27, "servic": [27, 65, 86], "ec2": 27, "ami": 27, "77": [27, 67, 107], "statist": [27, 124], "b4run": [27, 131], "sytl": [27, 36, 81], "checkpoint": [27, 47, 118, 124, 125, 127, 129, 132, 148, 150, 152], "share": [27, 28, 55, 62, 76, 78, 94, 97, 99], "gpu": [27, 129], "cautionari": [27, 48, 67, 151], "registr": [27, 48, 127, 162, 164], "earth": [27, 42, 48, 51, 56, 63, 70, 75, 123, 125, 133, 142, 151], "slip": [27, 32, 48, 49, 114, 162, 166], "sea_level": [27, 34, 42, 48, 52, 63, 102, 130, 144, 151, 162, 164], "eta": [27, 32, 36, 37, 42, 47, 48, 72, 115, 123, 130, 143, 151], "lagrangian": [27, 47, 48, 130], "particl": [27, 36, 47, 48, 130, 135], "friction": [27, 48, 52, 151, 156, 157], "fgout": [27, 34, 47, 48, 63, 72, 135, 137, 151], "nearshor": [27, 34, 36, 47, 48, 52], "front": [27, 34, 41, 42, 48, 71, 103, 109, 142], "geometri": [27, 32, 49, 75, 96, 97, 101, 103, 106, 123], "jupyt": [27, 46, 48, 75, 78, 96, 110, 114, 123, 124, 130, 140], "notebook": [27, 32, 34, 42, 46, 48, 58, 70, 75, 78, 90, 96, 98, 114, 123, 124, 130, 140, 141, 142, 164], "concept": [27, 140], "pointwis": [27, 34, 57, 106, 123, 162], "potenti": [27, 71, 125, 143], "fly": 27, "commun": [27, 55, 86, 106, 109, 111, 115, 127], "hope": [28, 116], "greatli": [28, 36, 86, 118, 135, 143], "submodul": [28, 30, 56, 59, 61], "stai": [28, 34], "annot": [29, 63], "map2d_to_1d": 29, "unavail": 29, "sens": [29, 55, 64, 127, 132, 170], "context": [29, 55, 167], "plotdata": [29, 36, 37, 47, 82, 84, 91, 118, 124, 125, 147], "els": [29, 30, 62, 70, 106, 127, 142, 144, 152], "scalar": [29, 32, 42, 98, 106, 140, 144, 148, 170], "moment": [29, 32, 128], "outn": 29, "outaux": 29, "prepar": 30, "substanti": [30, 58, 86, 123, 129, 132], "incompat": [30, 55], "built": [30, 31, 49, 68, 78, 87, 96, 99, 101, 103, 115, 116, 156, 157], "correctli": [30, 34, 89, 95, 123], "Be": [30, 71, 143, 166], "verbos": [30, 32, 35, 37, 51, 63, 70, 91, 94, 98, 104, 116, 142, 148, 150, 152, 158, 164], "messag": [30, 43, 51, 58, 62, 71, 76, 91, 94, 98, 100, 103, 104, 106, 107, 118, 132, 148, 150, 152, 165], "wise": [30, 104], "especi": [30, 55, 89, 101], "necessit": 30, "modif": [30, 43, 65, 71, 82, 86, 92, 151], "compat": [30, 32, 35, 51, 55, 63, 75, 77, 81, 97, 99, 107, 120, 121, 125, 126, 136, 164], "explan": 30, "tracker": 30, "increasingli": 30, "push": [30, 58, 59], "unlik": [30, 34, 58, 59, 77], "accid": 30, "subrepositori": [30, 59], "oppos": [30, 159], "inter": [30, 126], "proceed": [30, 58], "txt": [30, 34, 47, 54, 59, 64, 86, 98, 118, 125, 126, 127, 139, 158], "isol": [30, 62], "editabl": 30, "site": [30, 55, 62, 111], "pull_al": [30, 59], "sh": [30, 58, 59, 99], "prompt": [30, 31, 71, 82, 84, 93, 96, 108, 164], "shortli": [30, 116], "handi": [30, 66], "uncommit": [30, 54, 59], "checkout": [30, 56, 58, 59, 61], "claw_git_statu": [30, 54, 59, 131], "claw_git_diff": [30, 54, 59], "usernam": [30, 31], "mind": 30, "password": 30, "whenev": [30, 124, 167], "brought": 30, "new_featur": 30, "accident": [30, 82], "recov": [30, 35], "histori": [30, 37, 59, 62, 84], "throw": [30, 137], "awai": [30, 143], "recreat": [30, 43, 66, 130], "rebas": 30, "onto": [30, 32, 55, 144, 164], "newer": [30, 76, 92, 127], "head": [30, 32, 58], "cleaner": [30, 125], "recompil": [30, 43, 44, 66, 76, 109, 118, 130, 149, 167], "nosetest": [30, 39, 40, 99, 105, 116, 160], "fail": [30, 97, 99, 109, 116, 123, 158], "pr": [30, 59, 116, 127], "someon": [30, 66], "propos": [30, 170], "rid": 30, "cross": [30, 49], "poor": 30, "whole": [30, 55, 98, 99], "lot": [30, 42, 118, 130], "doesn": [30, 34, 62, 67, 106], "pep8": 30, "aim": 30, "vim": 30, "nice": [30, 63, 89, 101, 120, 142], "underlin": 30, "nose": [30, 39, 40, 87, 99, 116, 136, 160], "suit": [30, 55, 116], "exactli": [30, 35, 36, 54, 56, 72, 106, 142, 148], "overrid": [30, 44, 55, 88, 89, 109], "bind": [30, 55, 81, 89, 99], "dockerhub": [31, 59], "riemann_book": [31, 141], "0_dockerimag": 31, "8889": 31, "0_contain": 31, "serv": 31, "jovyan": 31, "exit": [31, 82, 99, 105], "ctrl": [31, 82], "quit": [31, 71, 82, 84, 154], "whatev": [31, 88, 103, 140], "ip": [31, 82, 84], "localhost": 31, "token": 31, "wherev": [31, 165], "ones": [31, 88, 89, 106, 127, 148, 149], "ipynb": [31, 32, 34, 42, 75, 114, 124, 141, 142], "chile2010a": [31, 114], "exercis": [31, 48, 114, 116], "transfer": 31, "laptop": [31, 96], "accomplish": [31, 42, 66], "0_geoclaw_dockerimag": 31, "contains": 31, "rm": [31, 58, 59, 66, 165], "1_contain": 31, "rmi": 31, "1_dockerimag": 31, "prune": 31, "dockeril": 31, "root": [31, 62, 97, 98, 103], "dockerfile_v5": 31, "0_geoclaw": 31, "test_bind": 31, "subfault": [32, 48, 127, 128, 166], "seafloor": [32, 52, 75, 144, 166], "rise_tim": [32, 75], "rise": [32, 75, 143, 144], "rise_time_start": [32, 75], "piecewis": [32, 34, 42, 47, 49, 57, 72, 75, 120, 140, 142, 162], "quadrat": [32, 75], "rise_time_end": [32, 75], "rise_fract": [32, 75], "csv": [32, 75, 127], "erron": [32, 75], "dtopotools_exampl": [32, 75, 114], "test_dtopotool": 32, "deal": [32, 52, 81, 98, 99, 106, 158, 164], "sub": [32, 116, 164], "dtopographi": [32, 75], "ucsbfault": [32, 75], "csvfault": [32, 75], "siftfault": [32, 75, 127], "segmentedplanefault": [32, 75], "fault1d": 32, "subfault1d": 32, "dtopography1d": 32, "plot_dz_contour": 32, "plot_dz_color": 32, "mw": [32, 127], "strike_direct": 32, "input_unit": 32, "coordinate_specif": [32, 75], "subclass": 32, "row": [32, 34, 57, 92, 115, 162, 164], "rupture_typ": [32, 75], "static": [32, 75, 127], "dtopo_typ": [32, 35, 49, 63, 75], "repres": [32, 49, 88, 94, 97, 101, 102, 104, 106, 164, 170], "dz_at_t": 32, "dz": [32, 35, 49, 144, 162], "dz_max": 32, "ab": [32, 56, 101, 109, 115, 142, 164], "self": [32, 35, 37, 104, 136, 164], "cmax_dz": 32, "dz_interv": 32, "colorbar_ticks": 32, "colorbar_labels": 32, "fig_kwarg": [32, 164], "appar": [32, 72, 76], "dz_cellave_at_t": 32, "compos": [32, 88], "mo": 32, "seismic": [32, 37, 48, 75], "containing_rect": 32, "create_dtopo_xi": [32, 75], "rect": [32, 142], "016666666666666666": 32, "buffer_s": [32, 75], "buffer": [32, 42, 47, 115, 124, 125, 149, 150, 164], "x1": [32, 34, 35, 36, 41, 51, 63, 89, 98, 115, 142, 149, 150, 151, 164], "x2": [32, 34, 35, 36, 41, 51, 63, 98, 115, 142, 149, 150, 151, 164], "y1": [32, 34, 35, 36, 41, 51, 63, 89, 98, 115, 142, 149, 150, 151, 164], "y2": [32, 34, 35, 36, 41, 51, 63, 98, 115, 142, 149, 150, 151, 164], "create_dtopographi": [32, 75], "valueerror": [32, 158, 164], "plot_subfault": 32, "plot_centerlin": 32, "slip_color": 32, "cmap_slip": 32, "cmin_slip": 32, "cmax_slip": 32, "slip_tim": 32, "plot_rak": 32, "xylim": 32, "plot_box": [32, 164], "axessubplot": 32, "centroid": [32, 75], "dip": [32, 49, 75], "jet": [32, 71], "rake": [32, 75], "drawn": [32, 55, 147], "plot_subfaults_depth": 32, "column_map": 32, "skiprow": 32, "delimit": 32, "dict": [32, 37, 91, 97, 102, 103, 106, 158, 164], "strike": [32, 75], "calculate_geometri": 32, "kinemat": [32, 48], "skip": [32, 130], "width": [32, 36, 49, 55, 63, 75, 77, 94, 101, 106, 115, 142, 150, 152], "rigid": [32, 127], "mu": [32, 127], "set_dynamic_slip": 32, "slip_at_dynamic_t": 32, "column_list": 32, "output_unit": 32, "adopt": [32, 104], "Not": [32, 55, 94, 125, 132], "noaa": [32, 42, 51, 57, 70, 75, 127, 143, 158, 162, 166], "sift": [32, 75, 127], "ucsb": [32, 75, 166], "definit": [32, 71, 88, 115, 122], "gov": [32, 42, 51, 70, 75, 99, 158], "aboutu": 32, "020204mag_polici": 32, "php": [32, 65, 86], "sift_slip": 32, "longitude_shift": 32, "subset": [32, 34, 42, 70, 127, 142, 162, 164, 166], "load_sift_unit_sourc": 32, "pmel": [32, 75], "pub": [32, 158], "gica2937": 32, "although": [32, 55, 67, 71, 100, 101, 103, 115, 128, 134, 164], "notat": [32, 51, 63, 140], "compress": [32, 97, 164], "info_sz": 32, "dat": [32, 158], "acsza1": 32, "acszb1": 32, "set_subfault": 32, "assign": [32, 34, 36, 88, 91, 97, 103], "coodin": 32, "pascal": [32, 158], "centerlin": 32, "respecitv": 32, "mix": [32, 41, 55, 75], "nctr": [32, 75], "upstrik": [32, 75], "updip": [32, 75], "calculate_geometry_triangl": 32, "triangular": [32, 48, 127], "lat": [32, 51, 55, 57, 63, 162, 164], "convert_to_standard_unit": 32, "measur": [32, 47, 49, 51, 75], "dynamic_slip": [32, 128], "rupture_tim": [32, 75], "rise_shap": 32, "gauss_pt": 32, "latitutd": 32, "modulu": [32, 102, 108, 150, 167], "shape": [32, 37, 42, 51, 63, 70, 89, 94, 97, 99, 106, 142, 164], "displac": [32, 36, 48, 49, 52, 75, 144, 151, 166], "1992": 32, "okadamap": 32, "rigin": 32, "dave": 32, "xiaom": 32, "wang": 32, "rewritten": 32, "dicuss": 32, "movement": 32, "sec": 32, "pw": [32, 34], "smooth": [32, 72, 104, 115, 167], "ruptur": [32, 48], "set_corn": 32, "projection_zon": 32, "iter": [32, 42, 70, 102], "1000000": 32, "x0": [32, 51], "orthogon": 32, "subdividedplanefault": 32, "base_subfault": 32, "nstrike": 32, "ndip": 32, "slip_funct": 32, "subdivid": [32, 75], "uniform": [32, 34, 36, 37, 48, 70, 75, 78, 89, 127, 162], "subdivis": 32, "slip_distribut": 32, "xi": [32, 167], "rescal": 32, "tensorproductfault": 32, "fault_plan": 32, "slip_along_strik": 32, "slip_down_dip": 32, "goe": [32, 48, 58], "constant": [32, 34, 36, 49, 52, 63, 68, 72, 99, 102, 140, 141, 142, 144, 151, 164, 167], "tensor": 32, "chen": [32, 166], "ji": [32, 166], "geol": 32, "edu": [32, 55, 97, 129], "faculti": 32, "big_earthquak": 32, "sea": [32, 47, 48, 50, 52, 55, 72, 75, 112, 123, 130, 143, 162, 164, 166], "floor": [32, 48, 75], "durat": [32, 132, 143], "slope": [32, 104, 132], "rf": [32, 58, 59], "bear": [32, 51, 118], "movabl": 32, "latlong": [32, 55], "happen": [33, 55, 66, 88, 103, 106, 130, 165], "filenam": [33, 55, 123, 135, 136, 164], "fgmax_tool": [34, 122, 130, 136, 151], "increment": [34, 47, 55, 94, 109, 148, 150, 152], "record": [34, 45, 47, 64, 106, 138, 158, 166], "observ": [34, 52, 119, 132, 143, 148, 151, 159, 166], "align": [34, 36, 42, 55, 63, 70, 130, 132, 151], "arbitrari": [34, 36, 63, 104, 119, 142, 151], "transect": [34, 51, 63, 118, 151], "coastlin": [34, 55, 70, 72, 130, 142, 151, 166], "quadrilater": [34, 63], "dem": [34, 48, 57, 63, 127, 162, 164, 166], "topo_typ": [34, 42, 49, 57, 63, 70, 123, 124, 127, 130, 162, 164], "point_styl": [34, 35, 70, 122], "fgmax_grid": [34, 35, 63, 130, 136, 151], "junction": 34, "purpos": [34, 36, 48, 52, 57, 65, 71, 77, 86, 94, 114, 116, 139, 142, 148], "maxima": [34, 76], "fgmax_data": [34, 151], "fgmaxgrid": [34, 35, 136, 151], "fgmax0001": 34, "fgno": [34, 35, 36, 37, 136], "sequenti": [34, 36], "fg_maxnum_fgrid": 34, "fgmax_modul": 34, "recomil": 34, "everyth": [34, 59, 62, 76, 99, 108, 109, 116, 127], "fg": 34, "tstart_max": 34, "tend_max": 34, "dt_check": 34, "min_level_check": 34, "arrival_tol": 34, "interp_method": 34, "npt": [34, 51], "xy_fil": 34, "regular": [34, 164], "cartesian": [34, 50, 63, 89, 151], "nx": [34, 36], "ny": [34, 36], "n12": 34, "n23": 34, "x3": [34, 63, 98], "y3": [34, 63, 98], "x4": [34, 63], "y4": [34, 63], "fourth": [34, 57], "perimet": 34, "intersect": [34, 49, 70, 75], "connect": [34, 49, 51, 58, 63, 70, 118, 130, 142], "expect": [34, 72, 102, 108, 109, 110, 116, 127, 128, 130, 132, 150, 151, 152, 158], "topofil": [34, 35, 49, 57, 63, 127, 128, 129, 130, 151, 162, 164], "south": [34, 49, 162], "preprocess": [34, 123], "satisfi": [34, 42, 70, 104, 115, 142, 170], "captur": [34, 47, 52, 64, 142, 162], "posit": [34, 42, 55, 75, 78, 109, 151, 162, 164], "digit": [34, 36, 42, 57, 63, 64, 82, 125, 126, 127, 164], "correspondingli": 34, "1e9": [34, 41, 64], "simul": [34, 38, 39, 40, 42, 50, 52, 55, 71, 72, 91, 94, 96, 98, 99, 101, 105, 108, 113, 125, 126, 127, 129, 142, 144, 158], "exce": [34, 55, 115, 149], "care": [34, 42, 48, 99], "start_max": 34, "natur": [34, 49, 58, 140, 170], "discard": [34, 104], "reiniti": [34, 125], "depress": 34, "margin": [34, 48], "fgmax_valu": 34, "eta_tild": 34, "speed": [34, 36, 37, 49, 88, 92, 102, 108, 118, 125, 130, 140, 141, 148, 151, 158, 159, 164, 167, 170], "harbor": 34, "ship": 34, "ground": [34, 75, 130], "fg_num_val": 34, "num_fgmax_v": [34, 151], "govern": [34, 151], "fgmax_interpol": 34, "fgmax_interpolate0": 34, "fgmax_interp": [34, 132], "unrealist": [34, 72], "island": [34, 42, 70, 142], "65": 34, "amr_levels_max": [34, 115, 149, 150], "8000": 34, "e10": 34, "stop": [34, 76, 82, 118, 119, 127, 150, 152, 164], "20": [34, 42, 53, 55, 57, 63, 70, 79, 82, 102, 115, 149, 150, 151, 162, 164], "const": 34, "fg1": 34, "valuemax": 34, "aux1": 34, "fgmax0002": 34, "explicitli": [34, 67, 71, 96, 132, 148, 165, 170], "dealt": [34, 42], "read_output": [34, 35, 136], "paragraph": 34, "qoi": [34, 37], "2n": 34, "hmin": 34, "13": [34, 47, 161], "99999000e": 34, "99": [34, 150, 152], "never": [34, 72, 101, 106, 112, 115, 130, 142, 148, 150, 152, 165], "met": [34, 65, 86], "make_input_fil": 34, "readm": [34, 36, 58, 59, 130, 140, 146, 167], "chile2010_fgmax": [34, 36, 135], "bound": [35, 37, 89, 92, 99, 136, 142, 148, 164], "interp_dz": 35, "dtopo_path": 35, "b0": [35, 37], "event": [35, 48, 52, 63, 65, 75, 86, 143, 144, 148], "ps4_to_arrai": 35, "mask": [35, 42, 48, 53, 142, 164], "topo_styl": 35, "xy_fnam": 35, "read_fgmax_grids_data": 35, "data_fil": [35, 37], "ij": [35, 136], "xy": [35, 63, 136], "layout": [35, 58, 136], "unexpect": [35, 51, 55, 63, 66, 158], "indent": [35, 51, 63], "quot": [35, 63], "unind": [35, 63, 158], "topotool": [35, 42, 48, 51, 57, 63, 70, 120, 121, 122, 123, 124, 127, 128, 133, 136, 162, 163], "write_to_fgmax_data": 35, "fid": [35, 37], "adjust_fgmax_1d": 35, "x1_desir": 35, "x2_desir": 35, "x1_domain": 35, "x1_new": 35, "x2_new": 35, "npoint": 35, "linspac": [35, 71, 91, 108, 142], "fgout_tool": [36, 151], "complement": 36, "coincid": 36, "wherea": [36, 47, 55, 72, 81, 99], "occur": [36, 66, 75, 158, 159], "signific": [36, 68, 135, 138, 143, 164], "increas": [36, 37, 47, 55, 63, 76, 142, 151], "degrad": 36, "had": [36, 47, 56, 57, 125, 126, 127, 128, 132, 144], "tempor": [36, 47, 64], "seri": [36, 47, 64, 72, 158], "fact": [36, 55, 72, 97, 106, 110, 115, 144], "gauag": 36, "massless": 36, "tracer": [36, 141], "debri": 36, "fixedgrid": [36, 48, 135, 137], "carri": 36, "throughout": [36, 72, 125], "fgout_data": [36, 151], "fgout_grid": [36, 37, 63, 151], "fgoutgrid": [36, 37, 151], "runtim": [36, 109], "binary32": [36, 47, 77, 97, 135, 148, 150, 152], "200": [36, 55, 88, 108, 123, 152], "250": 36, "115": 36, "55": 36, "tstart": [36, 104], "tend": [36, 42, 104], "nout": [36, 77, 152], "37": [36, 51], "ascii": [36, 47, 57, 71, 88, 91, 98, 103, 125, 135, 136, 139, 148, 150, 152, 162, 168], "binary64": [36, 47, 77, 97, 135, 148, 150, 152], "float64": [36, 135, 148], "kind": [36, 91, 93, 98, 118, 129, 135, 140, 148], "float32": [36, 135, 148], "dump": [36, 77, 97, 135, 136, 148], "raw": [36, 97, 135, 148], "almost": [36, 148, 154], "precis": [36, 37, 44, 47, 63, 77, 89, 94, 97, 140, 148, 164], "fgout0001": 36, "t0000": [36, 71], "q0000": [36, 71, 148], "b0000": 36, "amr_level": [36, 77], "hierarchi": [36, 55, 94, 111], "file_prefix": [36, 97, 103, 135], "easier": [36, 62, 81, 125, 127, 142, 167], "manipul": [36, 47, 164], "fgframe": 36, "read_fram": [36, 37], "lazi": 36, "hss": [36, 37], "plottool": [36, 42, 70, 130], "pcolorcel": [36, 42, 70, 130, 142], "minimalist": 36, "geoplot": [36, 53, 55, 83], "cmap": [36, 42, 55, 63, 70, 82, 142, 164], "land_color": 36, "masked_wher": 36, "eta_plot": 36, "tsunami_colormap": 36, "overlap": [36, 115, 119, 120, 162], "fgout_interp": 36, "fgout_modul": 36, "unphys": 36, "intepol": 36, "fgout_writ": 36, "fgoutfram": 37, "make_fgout_fcn_xi": 37, "make_fgout_fcn_xyt": 37, "write_netcdf": 37, "read_netcdf": [37, 42, 70, 127, 128, 162, 164], "reconstruct": [37, 96, 104, 158], "read_netcdf_arrai": 37, "extract": [37, 55, 97, 136, 158, 164, 166], "print_netcdf_info": 37, "drytol": 37, "extent_cent": 37, "extent": [37, 41, 42, 52, 60, 63, 68, 70, 71, 88, 94, 106, 119, 132, 142, 162, 164], "extent_edg": 37, "read_fgout_grids_data": 37, "set_plotdata": 37, "write_to_fgout_data": 37, "get_as_arrai": 37, "rootgrp": 37, "bounds_error": 37, "fill_valu": [37, 97, 164], "nan": [37, 51, 164], "behavior": [37, 48, 58, 72, 115, 116, 124, 130, 132, 154], "regulargridinterpol": 37, "fgout1": 37, "fgout2": 37, "method_xi": 37, "method_t": 37, "linearli": 37, "fname_nc": 37, "contin": 37, "bfinal": 37, "qoi_arrai": 37, "fgout_fram": 37, "nc": [37, 42, 70, 127, 158, 162], "datatyp": 37, "f4": 37, "include_b0": 37, "include_bfin": 37, "metadata": [37, 77, 162, 164], "f8": 37, "byte": [37, 47, 77, 97], "twice": [37, 55, 139, 148], "downstream": 37, "field": [37, 47, 63, 101, 103, 106, 125, 127, 135, 158, 159], "first_test": 38, "euler_2d": [38, 40, 96, 101], "shock_bubble_interact": [38, 40, 93, 96, 105], "iplot": [38, 40, 93, 96, 99], "That": [38, 40, 42, 108, 162], "ensur": [38, 39, 40, 71, 113], "install_prerequisit": 38, "acoustics_1d_example1": [38, 39, 74], "statement": [38, 39, 71, 77, 110, 111, 118, 125, 134, 150], "troubl": [38, 39, 81, 96], "xclaw": [38, 39, 91], "plotting_makeplot": [38, 39], "fortfil": [38, 39], "install_fortran": 39, "prerequisit": [39, 40, 48, 60, 62, 118], "sv": [39, 160], "runtest": [39, 99, 160], "acoustics_1d_heterogen": [39, 160, 167], "regression_test": [39, 160], "acoustics1dheterogeneoustest": [39, 160], "acoustics_3d_heterogen": [39, 160], "acoustics3dheterogeneoustest": [39, 160], "advection_2d_annulu": [39, 160], "advection2dannulustest": [39, 160], "ran": [39, 160], "639": [39, 160], "manual": [40, 89, 98, 105, 107, 116, 160], "launch": [40, 93, 99, 100, 105], "setup": [40, 59, 88, 89, 93, 96, 99, 101, 104, 105, 106, 114, 146, 165], "regiondata": [41, 115, 150, 151], "minlevel": [41, 115, 132, 142, 149, 150, 151], "maxlevel": [41, 71, 115, 132, 142, 149, 150, 151], "clariti": 41, "ultim": 41, "flagregiondata": [41, 130], "everywher": [41, 42, 51, 68, 106, 144], "supplement": [41, 70, 153], "rundatat": 41, "region_domain": 41, "spatial_region_typ": 41, "spatial_region": 41, "restrict": [41, 55, 127, 142, 151, 162], "insid": [41, 94, 99, 103, 140, 142, 164], "trapezoid": 41, "region_trapezoid": 41, "spatial_region_fil": 41, "ruledrectangle_trapezoid": 41, "region_tool": [41, 42, 70, 130, 131, 142], "rr": [41, 70, 71, 84, 142], "ruledrectangl": [41, 70, 130, 142], "piecewiselinear": 41, "ixi": [41, 70, 140, 142], "advection_2d_flagregion": 41, "constraint": [42, 47, 142, 149, 170], "dike": [42, 70, 130, 151], "creation": [42, 82, 96, 119], "even": [42, 52, 55, 62, 65, 75, 86, 97, 109, 115, 130, 149, 150, 162, 165, 167], "inlin": [42, 141], "marching_front": [42, 70, 130], "zmin": [42, 70], "60": [42, 55, 70, 75, 76, 130, 149], "zmax": [42, 70], "40": [42, 55, 70, 77, 115, 151, 161], "land_cmap": 42, "make_colormap": [42, 70, 82], "sea_cmap": 42, "norm": [42, 63, 70, 115, 164], "add_colormap": [42, 70, 124, 130], "data_limit": [42, 70], "data_break": [42, 70, 164], "sea_cmap_dri": 42, "cmap_dri": [42, 70], "norm_dri": [42, 70], "sw": [42, 57, 70, 141], "coast": [42, 70, 115, 144, 164], "whidbei": [42, 70, 142], "maxwelton": [42, 70], "beach": [42, 70, 141], "marchingfront": 42, "region1_png": [42, 70], "imread": [42, 70], "region1": [42, 70], "46": [42, 70, 164], "38": [42, 70], "47": [42, 70, 142], "93": [42, 70, 124], "96": [42, 70], "imshow": [42, 70, 118, 164], "48": [42, 55, 70, 142], "puget": [42, 70, 142], "sound": [42, 70, 88, 102, 108, 142], "ncei": [42, 70, 143, 162, 166], "thredd": [42, 70, 162, 166], "ngdc": [42, 70, 143], "dodsc": [42, 70], "puget_sound_13_mhw_2014": [42, 70], "colorbar": [42, 63, 70, 127, 130, 142, 147, 164], "mhw": [42, 48, 52, 143, 162, 166], "wetland": [42, 70], "lake": [42, 48, 70, 144, 151, 162], "repeat": [42, 70, 84, 139, 149, 151], "wet_point": [42, 70], "select_by_flood": [42, 70], "z1": [42, 70], "z2": [42, 70], "max_it": [42, 70], "zdry": [42, 70], "masked_arrai": [42, 70, 142], "279936": [42, 70], "112": [42, 70], "59775": [42, 70], "mislead": [42, 72], "pink": [42, 63, 82, 147], "distinguish": 42, "wet": [42, 48, 70, 72, 142, 151], "mask_dri": 42, "logical_not": [42, 70], "z_dry": 42, "mask_dry_onshor": 42, "logical_and": [42, 70], "z_allow_wet": 42, "rotat": [42, 49, 53, 136], "dry_point": 42, "shorelin": [42, 55, 164], "inland": [42, 70, 151], "sum": [42, 47, 75, 98, 106, 161], "3x3": 42, "dry_points_sum": 42, "reset": [42, 44, 58, 109], "white_r": 42, "461": 42, "379": 42, "929": 42, "961": 42, "z_format": [42, 70, 164], "1i": [42, 70], "fuction": 42, "set_xyz": [42, 164], "force_dry_init_topo": 42, "_y": [42, 70, 164], "_z": [42, 70, 164], "generate_2d_coordin": [42, 70, 164], "fname_force_dry_init": 42, "864": 42, "ncol": [42, 123], "324": 42, "nrow": 42, "224599074275750e": 42, "02": [42, 63, 97, 102, 150], "793009258334999e": 42, "259259000800000e": 42, "05": [42, 92, 102], "cellsiz": [42, 57, 123, 162], "9999": [42, 57, 162, 164], "nodata_valu": [42, 164], "forcedri": [42, 151], "force_dri": [42, 63, 130], "fname": [42, 63, 132, 142, 150, 151, 152], "qinit_data": [42, 144, 151], "force_dry_list": [42, 151], "setprob": [42, 67, 150, 152, 167], "qinit_modul": 42, "filval": 42, "t_stays_dri": 42, "gotten": 42, "offer": [43, 55, 116], "Or": [43, 63, 84, 142, 164], "dot": [43, 47, 55, 63, 66, 165], "unix": [43, 74], "invis": [43, 123], "encount": [43, 55, 82, 105, 107], "catch": [43, 96], "bash": [44, 55, 61, 62, 71, 76, 99, 111, 146], "export": [44, 55, 61, 62, 71, 76, 99, 107, 146], "f77": [44, 165], "compliant": 44, "yourself": [44, 47, 61], "rerun": [44, 47, 57, 59, 62], "scan": 44, "abil": [44, 118, 123, 125, 129, 158, 164], "meant": [44, 94, 104, 158], "pedant": 44, "fbound": 44, "ffpe": 44, "trap": 44, "invalid": [44, 103], "overflow": [44, 118, 126], "optim": [44, 86, 109], "o2": [44, 76], "fopenmp": [44, 76, 109], "dnetcdf": [44, 162], "lnetcdf": 44, "netcdf4_dir": 44, "ifort": 44, "cb": 44, "cu": 44, "fpe0": 44, "ftrapuv": 44, "fp": 44, "qopenmp": 44, "omp_num_thread": [44, 76, 125, 161], "thread": [44, 76, 115, 130, 161], "2006": [45, 151], "playlist": 45, "pressur": [47, 71, 84, 98, 102, 108, 126, 127, 151, 158, 159], "tide": [47, 48, 51, 127, 143, 164], "behav": [47, 49], "difficult": 47, "clearli": [47, 52, 55, 142], "accuraci": [47, 68, 78, 150, 152], "nonphys": 47, "oscil": [47, 170], "prior": [47, 64, 65, 86, 138, 144, 150, 152, 167], "gaugedata": [47, 64, 150], "gaugeno": [47, 64, 150], "meqn": [47, 77, 140, 167], "varieti": [47, 91], "basi": [47, 71], "file_format": [47, 97, 103, 135, 158], "smallest": [47, 115, 142], "reduct": [47, 118], "display_format": [47, 64], "e15": 47, "q_out_field": 47, "aux_out_field": 47, "min_time_incr": [47, 64], "amount": [47, 52, 58], "decreas": [47, 144, 162], "effect": [47, 55, 68, 71, 94, 98, 115, 116, 143, 151, 154, 164], "turn": [47, 50, 52, 63, 79, 82, 98, 116, 124, 130, 135], "id": [47, 51, 103], "e26": 47, "16": [47, 55, 63, 75, 94, 142, 148], "e8": 47, "multilay": [47, 120, 123, 126, 127, 128], "accumul": [47, 125, 139], "intermit": [47, 125], "max_buff": [47, 125], "gauges_modul": [47, 123, 125], "distinct": [47, 125], "gauge00001": [47, 64, 125], "quickli": [47, 58, 63, 90, 125, 144, 164], "overwritten": [47, 97, 98, 125, 139, 167], "gaugexxxxx": [47, 125, 139], "monoton": [47, 148, 151], "pars": [47, 109], "gaugesolut": 47, "gauge_id": 47, "getgaug": 47, "plotfigur": [47, 82, 118, 147], "300": [47, 142], "each_gaug": 47, "1d_plot": [47, 82, 84, 147], "setgaug": [47, 124], "each_fram": 47, "plotclaw": [47, 81, 82, 84, 147], "plotgaug": 47, "loop": [47, 71, 81, 109, 115, 118, 127, 130, 132, 140, 144, 147, 148, 167], "cleargaug": 47, "_output_from_previous_run": 47, "2d_pcolor": [47, 55], "addgaug": 47, "plot_gauge_loc": 47, "format_str": 47, "ko": 47, "add_label": 47, "overview": [48, 55, 81, 117, 121, 130], "teach": [48, 52, 114], "guarante": [48, 52, 104, 114], "liabil": [48, 52, 65, 86, 114], "underwat": [48, 55], "robust": [48, 127, 141, 164], "gallery_geoclaw": 48, "dtopotool": [48, 75, 121, 122, 124, 127, 128, 162, 163], "kmltool": [48, 51, 130, 131, 133, 163], "geo": [48, 68], "chile": [48, 63, 75], "2010": [48, 63, 75, 151], "dart": 48, "buoi": 48, "previous_pts_chosen": 48, "arcsecond": [48, 162], "force_dry_init": [48, 130], "topograpi": [48, 162], "wide": [49, 62, 111, 141], "insur": [49, 54, 58, 66, 84, 115, 119, 123, 149, 151, 162], "contrast": [49, 57, 142], "newli": 49, "roughli": [49, 56, 142, 161], "transit": [49, 136, 137], "sometim": [49, 62, 66, 70, 78, 82, 88, 98, 118, 127, 134, 143, 144, 151, 159, 166], "prefer": [49, 63, 99, 101, 146, 149, 158], "topo1d": 49, "1d_classic": [49, 118], "geo_data": [49, 64, 137, 151, 154], "rotation": 49, "geometr": [49, 154, 167], "spread": 49, "crater": 49, "endpoint": 49, "pole": 49, "ordinari": [49, 140], "Near": 49, "disturb": [49, 55], "decai": 49, "refocu": 49, "grid_data": 49, "grid_typ": 49, "te": 49, "nonuniform": [49, 71], "fname_celledg": 49, "nonuniform_grid_tool": 49, "make_mapc2p": 49, "deeper": [49, 142, 151, 162], "ocean_shelf_beach": 49, "topo_data": [49, 151], "topofile_path": 49, "dtopo_data": [49, 119, 151], "dtopofil": [49, 63, 75, 151], "dtopofile_path": 49, "mt": [49, 162], "okada_dtopo": 49, "dms2decim": 51, "decim": [51, 63], "dist_meters2latlong": 51, "dist_latlong2met": 51, "haversin": 51, "great": [51, 93, 118], "inv_haversin": 51, "invert": 51, "gctransect": [51, 118], "fetch_noaa_tide_data": 51, "predict": 51, "y0": 51, "bearing_unit": 51, "radian": 51, "beta": [51, 92, 104, 152], "sin": [51, 82], "longitudin": 51, "latitudin": 51, "coord": [51, 55], "negat": [51, 162], "30": [51, 55, 57, 115, 149, 151, 162], "51": 51, "span": [51, 55, 63], "station": [51, 143, 166], "begin_d": 51, "end_dat": 51, "time_zon": 51, "gmt": 51, "datum": [51, 52, 102, 143, 151, 166], "stnd": 51, "metric": 51, "cache_dir": 51, "begin": [51, 63, 94, 98, 102, 108, 141, 158], "op": 51, "api": [51, 127], "tidesandcurr": 51, "scratch": [51, 70, 108], "charact": 51, "datetim": [51, 158], "date_tim": 51, "ndarrai": [51, 92, 94, 102, 106, 158, 164], "water_level": 51, "preliminari": [51, 127, 166], "verifi": [51, 109, 116, 166], "rearth": 51, "6367500": 51, "pm": 51, "tohoku": 51, "crescent": 51, "citi": 51, "xtran": [51, 63], "ytran": [51, 63], "142": 51, "124": 51, "41": [51, 161], "74": [51, 55], "transect2kml": [51, 63], "kml": [51, 63, 123, 125, 126, 127, 130, 131, 142], "formula": [51, 68, 144], "stackexchang": 51, "1783746": 51, "rsphere": [51, 89], "believ": [52, 110, 125, 130], "real": [52, 59, 68, 109, 140, 166], "world": [52, 68, 96, 99, 158], "intend": [52, 89, 127], "approv": 52, "nhtmp": 52, "benchmark": 52, "nthmp": 52, "awar": [52, 99], "scenario": [52, 143], "invest": 52, "learn": [52, 93, 110], "geohazard": 52, "geoscientist": 52, "expert": 52, "cautiou": 52, "sensit": [52, 68], "confirm": 52, "imposs": [52, 148], "encapsul": 52, "knowledg": 52, "inaccuraci": 52, "uncertainti": [52, 68], "subduct": [52, 75], "zone": [52, 55, 63, 149, 150], "understood": 52, "turbul": [52, 104], "bore": 52, "inaccur": 52, "becom": [52, 107, 170], "agreement": 52, "caution": 52, "empir": [52, 68], "corioli": [52, 151, 156, 157], "littl": [52, 75, 97, 143], "coriolis_forc": [52, 151], "know": [52, 62, 66, 75, 86, 113, 126, 130, 132, 140, 143, 164, 165, 166], "upward": 52, "realiti": 52, "hard": [53, 58, 76, 82, 164], "disabl": [53, 97, 105, 151], "plain": 53, "mean_latitud": 53, "hash": [54, 58, 116], "print_git_statu": 54, "git_statu": 54, "power": [55, 60, 81], "georeferenc": 55, "simultan": [55, 125], "gi": [55, 125, 162], "critic": [55, 98, 140], "decis": 55, "nevertheless": 55, "lxml": 55, "pykml": 55, "conda": 55, "pyramid": 55, "geospati": 55, "abstract": 55, "osx": [55, 85], "macport": 55, "homebrew": [55, 85], "gdal_data": 55, "gc": 55, "cv": [55, 71], "epsg": 55, "wkt": 55, "georefer": 55, "warp": 55, "anaconda": [55, 105], "gdal_test": 55, "frame0005fig1": 55, "1440": 55, "1440p": 55, "1440l": 55, "frame0005fig1_tmp": 55, "vrt": 55, "band": [55, 164], "destin": 55, "100": [55, 75, 88, 91, 94, 103, 106, 108, 124, 127, 142, 152, 164], "receiv": [55, 116], "libgdal": 55, "dylib": 55, "liblzma": 55, "xz": 55, "setplot_fil": 55, "setplot_kml": 55, "chile_2010": 55, "slider": [55, 63], "panel": 55, "chile2010": [55, 114, 115, 119, 122, 128, 162], "kml_name": 55, "kml_starttim": 55, "utc": [55, 63], "kml_tz_offset": 55, "kml_index_fnam": 55, "_googleearth": 55, "kml_user_fil": 55, "santiago": 55, "kml_publish": 55, "kml_map_topo_to_latlong": 55, "sidebar": [55, 58], "kml_timezon": 55, "japan": [55, 63], "address": [55, 58, 125], "host": 55, "kml_xlimit": 55, "kml_ylimit": 55, "kml_use_figure_limit": 55, "member": [55, 101, 103, 108], "googleearth": [55, 63], "placemark": 55, "geograph": 55, "viewabl": [55, 91], "remain": [55, 62, 101, 109, 111, 119, 156, 157, 158], "use_for_kml": 55, "120": 55, "kml_use_for_initial_view": 55, "kml_figsiz": 55, "kml_dpi": [55, 63], "kml_tile_imag": 55, "longitude_min": 55, "longitude_max": 55, "latitude_min": 55, "latitude_max": 55, "camera": 55, "size_x_inch": 55, "size_y_inch": 55, "dpi": [55, 63], "pixel": [55, 63], "qualiti": [55, 131], "backend": 55, "furthermor": [55, 108], "pseudo": [55, 71], "height": [55, 102, 164], "transpar": [55, 63], "surface_or_depth": [55, 83], "cmin": [55, 63], "googleearth_transpar": 55, "kml_colorbar": 55, "cmax": [55, 63], "kml_build_colorbar": [55, 63], "alter": 55, "occupi": 55, "contourf": [55, 81], "googleearth_lightblu": 55, "googleearth_darkblu": 55, "appeal": 55, "overlaid": [55, 63], "ridg": 55, "lighter": 55, "darker": 55, "folder": 55, "hide": [55, 71], "unalt": 55, "map_topo_to_latlong": 55, "contan": 55, "referenc": [55, 138, 143, 162], "un": 55, "unzip": 55, "zipinfo": 55, "groundoverlai": 55, "edit": [55, 58, 59, 62, 84], "entri": [55, 64, 88, 98, 109, 158], "low": [55, 70, 89, 164, 166], "unapp": 55, "8x6": 55, "1600": [55, 77], "1200": 55, "notic": [55, 65, 86, 108, 116], "stripe": 55, "plaid": 55, "neither": [55, 63, 65, 86, 125], "evenli": [55, 98], "30x30": 55, "360x360": 55, "baselin": 55, "unaccept": 55, "sharper": [55, 63], "32768": 55, "accordingli": [55, 162], "subject": [55, 70, 115, 149, 151], "round": 55, "prevent": 55, "118": 55, "116": [55, 122], "18": [55, 102, 120, 121, 138], "rcl": 55, "1200x1680": 55, "overland": 55, "flood": [55, 70, 144], "topograph": 55, "longtitud": 55, "crucial": [55, 162], "assumpt": [55, 58], "48000": 55, "17540": 55, "map_cart_to_latlong": 55, "xc": [55, 108], "yc": 55, "topo_xlim": 55, "ge_xlim": 55, "111": [55, 125], "96132553": 55, "36256443": 55, "slope_x": 55, "xp": [55, 89], "topo_ylim": 55, "17500": 55, "ge_ylim": 55, "43": 55, "79453362": 55, "95123268": 55, "slope_i": 55, "yp": [55, 89], "teton": 55, "dam": [55, 144], "collabor": [55, 153], "weight": 55, "boisest": 55, "detect": [55, 66, 97, 105, 109, 165], "clawpack_gpu": 56, "cpp": 56, "cannot": [56, 62, 97, 132, 144, 158], "comparison": 56, "motlei": 56, "1029": 56, "2019ms001635": 56, "acceler": [56, 102], "arxiv": 56, "1808": 56, "02638": 56, "tree": [56, 62, 101, 146], "geo_gpu_pap": 56, "esri": [57, 162], "wikipedia": 57, "tell": [57, 77, 82, 88, 97, 111, 116], "llcorner": [57, 162, 164], "llcenter": [57, 162, 164], "xllcenter": [57, 127, 162], "yllcenter": [57, 127, 162], "nodatavalu": [57, 162], "3000": [57, 162], "4000": [57, 162], "xllcorner": [57, 162], "yllcorner": [57, 162], "smoothli": [57, 72], "our": [57, 67, 88, 113], "represent": [57, 94, 97, 103, 109, 164], "grid_registr": [57, 164], "crop": [57, 164], "coarsen": [57, 115, 127, 128, 149, 162, 164], "subsampl": [57, 162, 166], "coarsen_method": 57, "lon": [57, 162], "md": [58, 59, 127, 146], "intersphinx": 58, "documen": 58, "retir": 58, "conf": [58, 59], "mess": 58, "ff": [58, 63], "hasn": 58, "improperli": 58, "html_theme": 58, "_theme": 58, "flask_loc": 58, "_static": 58, "clawlogo": 58, "jpg": [58, 71], "logo": [58, 126], "clawicon": 58, "ico": 58, "icon": 58, "_templat": [58, 59], "literalinclud": 58, "setaux_default": 58, "rst": [58, 59, 130], "_build1": 58, "rebuilt": 58, "rebuild": 58, "multivers": 58, "sphinxcontrib": 58, "_build": 58, "smv_branch_whitelist": 58, "cp": [58, 59, 74], "fix_links_top_level": 58, "sphinx_web": 58, "decoupl": 58, "resid": [58, 66, 94], "remak": 58, "rsync": 58, "azv": 58, "extra_fil": 58, "cname": 58, "godaddi": 58, "verbatim": 58, "recurs": [58, 59, 74, 119], "rsync_clawpack": 58, "clawdev2013": 58, "redirect": 58, "an11": 58, "geoclawdev": 58, "clawdev": 58, "offici": [59, 85, 127], "subrepo": 59, "__init__": [59, 101, 111, 136], "1rc": 59, "rc": 59, "kentzo": 59, "prefix": [59, 91, 97, 98, 103], "gzip": [59, 97, 130], "draft": 59, "gz": [59, 61], "attach": [59, 97, 106], "upstream": 59, "repo": 59, "permiss": [59, 62, 65, 86], "trickeri": 59, "temp": 59, "mv": 59, "xf": 59, "python3": [59, 111, 126, 132, 137], "sdist": 59, "dist": 59, "xzf": [59, 61], "pkg": [59, 152], "cf": [59, 162], "upload": 59, "testpypi": 59, "twine": 59, "credenti": 59, "okai": 59, "pip3": 59, "uninstal": [59, 62, 111], "dir": [59, 99, 168], "820730": [59, 138], "changes_to_mast": 59, "release_5_x_x": 59, "5_x_x": 59, "installing_pip": 59, "installing_fortcod": 59, "docker_imag": 59, "ideal": [59, 102, 143], "sept": [59, 132], "regist": 60, "untar": 61, "pythonpath": [61, 62], "pypi": [62, 97], "think": [62, 68, 70, 72, 102], "clawpack_src": [62, 111], "egg": 62, "f2py": [62, 78, 89, 96, 101, 109, 140], "installing_opt": 62, "mechan": [62, 106, 138], "fc": [62, 89, 107, 109, 118, 165], "comfort": [62, 101], "claw_vers": 62, "wrong": [62, 67, 71, 98, 111], "pth": 62, "went": [62, 141], "overlai": [63, 133], "bgr": 63, "hex": [63, 82], "00ff00": 63, "yellow": [63, 82], "deg2dm": 63, "regions2kml": 63, "outlin": [63, 71, 84, 130, 140, 147], "box2kml": 63, "quad2kml": 63, "poly2kml": 63, "line2kml": 63, "gauges2kml": 63, "marker": 63, "topo2kml": 63, "dtopo2kml": 63, "fgmax2kml": [63, 130], "fgout2kml": 63, "make_input_data_kml": 63, "pcolorcells_for_kml": [63, 130], "pcolormesh": [63, 70], "png2kml": 63, "wrap": [63, 86, 89, 94, 104, 109, 158], "ge": 63, "topo2kmz": [63, 133], "kmz": [63, 125], "offshor": [63, 68, 70, 142, 144], "kml_header": 63, "kml_footer": 63, "kml_region": 63, "kml_gaug": 63, "kml_png": 63, "kml_cb": 63, "aabbggrr": 63, "dtopo_file_nam": 63, "8888ff": 63, "f2": 63, "num_digit": 63, "trail": 63, "NOT": [63, 65, 82, 86], "cb_filenam": 63, "close_fig": 63, "nrm": 63, "kml_timespan": 63, "event_tim": 63, "tz": 63, "tscale": 63, "timespan": 63, "27t06": 63, "00": [63, 77, 150], "03": [63, 102], "27t07": 63, "04": [63, 94, 102], "daylight": 63, "dst": 63, "timezon": 63, "magic": 63, "tabl": [63, 68, 81, 97], "wisdom": 63, "00ffff": 63, "png_filenam": 63, "dpc": 63, "max_inch": 63, "sharp": 63, "x_edg": [63, 142], "y_edg": [63, 142], "allot": 63, "smear": 63, "slowli": 63, "x_inch": 63, "y_inch": 63, "dcp": 63, "x_cell": 63, "y_cell": 63, "fig": [63, 142], "png_extent": 63, "savefig": [63, 135], "construc": 63, "png_file": 63, "png_name": 63, "radio_styl": 63, "cb_file": 63, "cb_name": 63, "cb_xfrac": 63, "cb_yfrac": 63, "radio": 63, "poli": 63, "max_vertices_in_descript": 63, "quad": 63, "region00": 63, "topo_file_nam": 63, "zlim": 63, "mask_outside_zlim": 63, "eas": [63, 136], "outsiz": 63, "pyplot": [63, 141, 164], "xg": 64, "yg": 64, "stationari": [64, 162], "huge": [64, 70, 144, 162], "frequenc": [64, 75, 104], "ug": 64, "vg": 64, "dt": [64, 89, 94, 98, 104, 118, 148, 150, 152, 162, 167], "euler": [64, 96, 104, 121, 123, 126, 128, 140, 167], "gtype": 64, "particle_tool": [64, 130], "opensourc": [65, 86], "copyright": [65, 86], "reserv": [65, 86], "redistribut": [65, 86], "permit": [65, 86], "retain": [65, 86, 97], "disclaim": [65, 86], "nor": [65, 86], "endors": [65, 86], "promot": [65, 86], "BY": [65, 86], "THE": [65, 86], "holder": [65, 86], "AND": [65, 86], "AS": [65, 86], "OR": [65, 86, 158], "impli": [65, 86, 151], "warranti": [65, 86], "BUT": [65, 86], "OF": [65, 86], "merchant": [65, 86], "fit": [65, 86], "FOR": [65, 86], "IN": [65, 86], "NO": [65, 86], "shall": [65, 86], "BE": [65, 82, 86], "liabl": [65, 86], "indirect": [65, 86], "incident": [65, 86], "exemplari": [65, 86], "consequenti": [65, 86], "procur": [65, 86], "substitut": [65, 86], "loss": [65, 86], "profit": [65, 86], "busi": [65, 86], "interrupt": [65, 86], "ON": [65, 82, 86], "strict": [65, 86], "tort": [65, 86], "neglig": [65, 76, 86, 151], "aris": [65, 86, 118], "IF": [65, 86, 151], "advis": [65, 86], "SUCH": [65, 86], "isn": [66, 76, 77, 165], "bomb": [66, 76], "abort": 66, "claw_outdir": [66, 82], "regener": 66, "safer": 66, "run1": 66, "suffix": [66, 164], "conlict": 66, "advection_1d_example1": 67, "classic_1d": 67, "exclud": 67, "exclude_modul": 67, "exclude_sourc": 67, "rp1_advect": 67, "lib": [67, 111], "common_sourc": 67, "bc1": [67, 109], "claw1ez": 67, "claw1": [67, 109], "copyq1": 67, "inlinelimit": 67, "opendatafil": 67, "out1": 67, "src1": [67, 157, 167, 170], "step1": 67, "wouldn": 67, "spite": [67, 70, 111], "bc1_inflow": 67, "matter": [67, 123], "_t": 68, "cdot": [68, 101, 142], "gamma": [68, 102], "frac": [68, 102, 108, 170], "gn": 68, "gravit": [68, 102, 151, 167], "rough": 68, "terrain": 68, "seab": 68, "025": [68, 151], "enhanc": [68, 86, 127], "threshold": 68, "friction_depth": [68, 151], "runup": 68, "discov": 68, "expon": 68, "arithmet": 68, "3333": 68, "d0": 68, "inadequaci": 68, "ztopo": 70, "pt_chosen": 70, "protect": [70, 130], "levi": [70, 130, 151], "unset": [70, 115], "geq0": 70, "force_dry_arrai": 70, "prev_pts_chosen": 70, "unchosen": 70, "converg": [70, 81], "pts_chosen": [70, 142], "touch": 70, "preserv": [70, 78, 104], "zmask": 70, "subtleti": 70, "ruledrectangle_covering_selected_point": [70, 142], "stretch": [70, 164], "farther": 70, "cmap_land": 70, "cmap_sea": 70, "cmap_topo": 70, "norm_topo": 70, "cmap_sea_dri": 70, "cultu": 70, "bai": [70, 143, 166], "183": 70, "89871": 70, "steep": [70, 170], "fist": 70, "1e6": 70, "arbitrarili": 70, "06": [70, 151], "84800": 70, "augment": [70, 141], "163": 70, "94297": 70, "pts_chosen_shallow": 70, "177": 70, "249577": 70, "zshallow": 70, "pts_chosen_nearshor": 70, "znearshor": 70, "compact": [70, 162], "fname_fgmax_mask": 70, "fgmax_pts_topostyl": 70, "topo_fgmax_mask": 70, "fewer": [70, 115, 164], "121": [70, 142], "pad": 70, "xv": [70, 142], "yv": [70, 142], "925": 70, "965": 70, "69788": 70, "76005": 70, "barrier": [70, 109], "mathwork": 71, "manifold": 71, "isosurfac": 71, "border": [71, 167], "cube": 71, "matlabpath": 71, "perman": [71, 118, 130, 131, 132, 133, 134, 135, 136, 137], "pathtool": 71, "q0001": 71, "t0001": 71, "enter": [71, 97, 99, 105], "plotclaw1": 71, "plotclaw2": 71, "plotclaw3": 71, "_": [71, 82, 101, 102, 113, 164, 170], "setplot2": 71, "ye": 71, "success": [71, 103, 164, 167], "0625": 71, "keyboard": 71, "redraw": [71, 84], "setplot1": 71, "setplot3": 71, "Such": 71, "rho": [71, 102, 108, 150], "rhou": 71, "rhov": 71, "outputdir": 71, "plottyp": 71, "mq": 71, "uservari": 71, "uservariablefil": 71, "temporarili": 71, "encourag": 71, "daspect": 71, "showpatchbord": 71, "showgridlin": 71, "gridlin": 71, "drawcontourlin": 71, "caxi": 71, "shg": 71, "fstr": 71, "framenam": 71, "frame0000": 71, "dpng": 71, "aftergrid": 71, "topic": 71, "clawgraph": 71, "t0002": 71, "doubl": [71, 89, 94, 109, 140, 149], "xxxx": 71, "unpredict": 71, "clash": 71, "strongli": [71, 110], "overridden": [71, 104, 106], "nearbi": [72, 143], "delta": [72, 92, 94, 101, 104, 140, 164, 167, 170], "polynomi": [72, 140], "a_0": 72, "a_1x": 72, "a_2i": 72, "a_3xi": 72, "greatest": [72, 115], "midpoint": [72, 94], "conclud": 72, "intact": [74, 124], "newdir": 74, "moreov": 75, "superposit": 75, "halfspac": 75, "rock": 75, "km": [75, 143], "shallowest": 75, "orient": [75, 89], "downward": 75, "counterclockwis": 75, "hang": 75, "foot": 75, "closer": [75, 150], "instati": [75, 164], "450": 75, "e3": 75, "104": 75, "668": 75, "826": 75, "chile_dtopo": 75, "tt3": [75, 164], "arcminut": [75, 162], "simplifi": [75, 81, 82, 97, 116, 126, 127, 167], "recangl": 75, "translat": 75, "homogen": [75, 104, 167, 170], "steadi": [75, 162], "rare": [75, 125], "flat": 75, "isotrop": 75, "justifi": 75, "poisson": 75, "triangl": 75, "multicor": [76, 125], "stack": [76, 85, 123, 142], "omp_stacks": 76, "16m": 76, "ulimit": 76, "unlimit": [76, 97], "mac": [76, 85, 107, 116, 146], "max1d": [76, 130, 149], "amr_modul": [76, 115, 123, 129, 130], "somewhat": [76, 81, 115, 116, 125, 148], "safe": 76, "output_styl": [77, 88, 91, 98, 135, 139, 148, 150, 152], "output_t0": [77, 136, 139, 148, 150, 152], "elif": [77, 150, 152], "output_tim": [77, 98, 139, 148, 150], "1800": 77, "7200": 77, "iout": [77, 152], "timestep": [77, 91, 98, 124, 126, 148, 150, 152, 158], "ntot": [77, 152], "output_step_interv": [77, 148, 150, 152], "total_step": [77, 148, 150, 152], "postprocess": [77, 98], "editor": 77, "valout": [77, 127, 130, 136, 161], "40000000e": 77, "ngrid": 77, "naux": 77, "nghost": 77, "preceed": [77, 167], "grid_numb": 77, "00000000e": 77, "xlow": 77, "ylow": 77, "25000000e": 77, "former": [77, 82, 167], "cut": [77, 149], "b0002": 77, "decompos": [77, 140, 170], "contigu": [77, 97, 106, 142], "output_aux_compon": [77, 148, 150, 152], "axxxx": [77, 97], "output_aux_onlyonc": [77, 148, 150, 152], "reli": [78, 89, 100, 110, 125], "weno": [78, 96, 104], "rk": [78, 104], "cake": 79, "belki": 79, "shoot": [81, 96], "favorit": 81, "hood": [81, 96], "task": 81, "phoni": 82, "plotexampl": 82, "acou": 82, "add_true_solut": 82, "qtrue": 82, "add_titl": 82, "4e": 82, "iplotclaw_": 82, "plotloop": [82, 84], "mid": 82, "stream": 82, "inherit": [82, 94, 104], "belong": [82, 94, 99, 103, 106], "getcwd": 82, "_output2": [82, 84], "plu": [82, 119, 150, 152, 164], "duplic": [82, 122, 136, 139], "wider": 82, "preced": 82, "pinkfig": 82, "acquir": 82, "get_cmap": 82, "fade": 82, "yellow_red_blu": 82, "ffff00": 82, "rgb": 82, "predefin": 82, "showcolor": 82, "call_setplot": 82, "inadvertantli": 82, "resetplot": [82, 84], "spot": 82, "exam": 82, "pd": [82, 84], "attributeerror": 82, "traceback": 82, "new_plotfgur": 82, "mi": 82, "spell": 82, "debugg": 82, "pdb": 82, "ipdb": 82, "plot_topo_fil": [83, 123], "replot": 84, "vi": [84, 91], "recomput": [84, 88, 120, 129], "my_setplot_fil": 84, "xcode": 85, "python2": [85, 132, 137], "brew": 85, "maco": 85, "scipysuperpack": 85, "pypa": 85, "en": 85, "upgrad": 85, "Their": 86, "appreci": 86, "surviv": 86, "alphabet": 86, "programmat": 86, "petclaw": [86, 99, 100, 101, 103, 109, 111, 116], "jed": 86, "brown": [86, 164], "ondrej": 86, "lisandro": 86, "dalcin": 86, "pyweno": [86, 104], "mainten": 86, "interleav": [86, 102], "kristof": 86, "unterweg": 86, "peanoclaw": 86, "chanc": 86, "reprint": 86, "inhabit": 88, "sigma": 88, "omega": 88, "meshgrid": [88, 101, 142, 164], "exp": [88, 98, 108], "cosin": 88, "imped": [88, 102, 108], "problem_data": [88, 102, 103, 106, 108, 141], "cparam": [88, 106], "set_cparam": [88, 106], "sol": 88, "readi": [88, 89, 91, 105], "clawsolver1d": [88, 91, 94, 104, 108, 140], "bc": [88, 95, 101, 108, 150, 152, 161], "pick": [88, 104], "rp": 88, "acoustics_1d": [88, 96, 102, 108], "decid": [88, 104], "my_rp_modul": 88, "my_acoustics_rp": 88, "tvd": [88, 94, 104, 170], "vanleer": [88, 104, 148, 150, 152], "evolve_to_tim": [88, 104], "keep_copi": [88, 91, 98], "behaviour": 88, "count": 88, "count_from_zero": 88, "write_aux_init": [88, 91], "write_aux_alwai": [88, 91, 98], "compute_p": [88, 91], "accept": [88, 98, 104, 148], "stress": [88, 98], "mp": [88, 98, 106], "clawdata2pyclaw": 89, "aid": 89, "therefor": [89, 99, 127, 162], "reutil": 89, "inde": [89, 99], "computation": [89, 104], "intens": 89, "shallow_spher": [89, 116, 141], "heavili": 89, "succesfulli": 89, "initialize_sourc": 89, "src2": [89, 136, 154, 157, 167], "distutil": [89, 137], "dummi": [89, 104, 167], "queri": [89, 94, 109], "namespac": 89, "docstr": [89, 93, 116], "zp": 89, "num_ghost": [89, 94, 97, 101, 102, 104, 106, 140, 148, 150, 152], "dxc": 89, "dyc": 89, "intent": [89, 140], "cf2py": 89, "multidimension": [89, 96], "fortran_src_wrapp": 89, "xlowerg": 89, "ylowerg": 89, "whith": 89, "hoc": 89, "step2": 89, "step2qcor": 89, "qcor": 89, "two_d_classic_sourc": 89, "flux2": 89, "philim": 89, "output_filenam": 89, "input_filenam": 89, "sagemathcloud": 90, "sagemath": 90, "termin": [90, 146, 148, 149], "my_solv": 91, "my_initial_solut": 91, "entireti": 91, "check_valid": 91, "tradit": [91, 97], "run_data": 91, "f_file_nam": [91, 98], "f_path": 91, "compute_f": [91, 98], "densiti": [91, 98, 102, 106, 108, 149, 150, 167], "file_prefix_p": 91, "prepend": 91, "nstepout": [91, 98], "out_tim": 91, "outdir_p": 91, "output_file_prefix": [91, 98], "_pyclaw_io": 91, "output_opt": 91, "runmak": 91, "xdir": 91, "xclawcmd": 91, "savecod": 91, "viewable_attribut": 91, "cygwin": 91, "xclawerr": 91, "xclawout": 91, "dtdx": 92, "act": [92, 164], "num_wav": [92, 102, 140, 148, 150, 152], "07": [92, 102, 161], "minmod": [92, 94, 104, 148, 150, 152], "minmod_limit": 92, "superbe": [92, 148, 150, 152], "superbee_limit": 92, "van": [92, 104, 148, 150, 152], "leer": [92, 104, 148, 150, 152], "mc": [92, 99, 148, 150, 152], "mc_limit": 92, "beam": 92, "warm": 92, "frommm": 92, "albada": 92, "klein": 92, "sharpen": 92, "van_leer_klein_sharpening_limit": 92, "roe": [92, 102, 132, 140], "scheme": [92, 102], "arora": 92, "arora_ro": 92, "theta": 92, "95": [92, 105], "safeti": 92, "theta_limit": 92, "ultrabe": 92, "cfl_superbe": 92, "cfl_superbee_theta": 92, "beta_limit": 92, "hyperbe": 92, "hyperbee_limit": 92, "superpow": 92, "superpower_limit": 92, "cada": 92, "torrilhon": 92, "cada_torrilhon_limit": 92, "cada_torrilhon_limiter_nonlinear": 92, "1st": [92, 104, 148, 150, 152, 167], "upper_bound_limit": 92, "friedemann": 92, "kemm": 92, "kemm_2009": 92, "08": [92, 94, 161], "depdend": 92, "6666666666666666": 92, "epsilon": 92, "caut": 92, "use_petsc": [93, 99], "solver_typ": [93, 104], "shouldn": 93, "htmlplot": 93, "acoustics_1d_homogen": [93, 116], "love": [93, 140], "nearli": 94, "arg": [94, 103], "patch_index": 94, "add_dimens": 94, "get_dim_attribut": 94, "attr": [94, 103], "lower_glob": 94, "num_cells_glob": 94, "upper_glob": 94, "node": [94, 127], "unmap": 94, "set_printopt": 94, "doctest": 94, "roundoff": 94, "c_center": 94, "p_node": 94, "grid1d": 94, "c_centers_with_ghost": 94, "lambda": [94, 164], "xarr": 94, "p_center": [94, 108], "49": [94, 164], "81": [94, 142, 151], "add_gaug": [94, 98], "gauge_coord": 94, "ind": 94, "c_nodes_with_ghost": 94, "mark_nod": 94, "mark_cent": 94, "setup_gauge_fil": 94, "_compute_c_cent": 94, "c_node": 94, "_compute_c_nod": 94, "gauge_dir_nam": 94, "gauge_file_nam": 94, "gauge_fil": 94, "_compute_p_cent": 94, "_compute_p_nod": 94, "on_lower_boundari": 94, "on_upper_boundari": 94, "995": 94, "101": [94, 161], "centers_with_ghost": 94, "ndarrari": 94, "nodes_with_ghost": 94, "geom": [94, 106], "clawsolver2d": [94, 104], "dimensional_split": [94, 123, 148, 150, 152], "strang": [94, 104, 148, 150, 152, 167], "enabl": [94, 97, 98, 105, 109, 125], "unsplit": [94, 148, 150, 152], "transverse_wav": [94, 148, 150, 152], "no_tran": 94, "trans_inc": 94, "trans_cor": 94, "mthlim": [94, 104], "famili": [94, 104, 150, 152], "enumer": [94, 104], "lax": [94, 104, 148, 150, 152, 170], "wendroff": [94, 104, 148, 150, 152, 170], "source_split": [94, 104, 148, 150, 152, 167], "fwave": [94, 102, 104, 140], "step_sourc": [94, 101, 104], "kernel_languag": [94, 104, 109, 116], "callabl": [96, 109], "precompil": 96, "massiv": 96, "biggest": 96, "supercomput": [96, 98, 99], "rung": [96, 104], "kutta": [96, 104], "intuit": 96, "guidelin": 96, "pyflak": 96, "pylint": 96, "coverag": [96, 116], "advection_1d": [96, 102], "burger": [96, 140, 167], "burgers_1d": [96, 102], "euler_exact_1d": [96, 102], "euler_hll_1d": [96, 102], "euler_hllc_1d": [96, 102], "euler_roe_1d": [96, 102], "shallow_exact_1d": [96, 102], "shallow_fwave_1d": [96, 102, 141], "shallow_hll_1d": [96, 102, 141], "shallow_roe_1d": [96, 102, 141], "2nd": [96, 101, 104, 148, 150, 152, 167], "leveque1997": 96, "32": [97, 99, 107, 149], "netcdf3": 97, "netcdf4": [97, 162, 164], "read_": [97, 103], "write_": 97, "write_aux": [97, 103], "thoroughli": 97, "read_aux": [97, 103], "txxxx": 97, "qxxxx": 97, "read_arrai": 97, "num_var": 97, "read_patch_head": 97, "read_t": 97, "nstate": 97, "write_p": [97, 103], "write_arrai": 97, "why": 97, "bxxxx": 97, "h5py": 97, "pytabl": 97, "moin": 97, "whichev": 97, "wrapper": [97, 164], "hdfgroup": 97, "obtain5": 97, "lzf": 97, "szip": 97, "dataset": [97, 162, 164, 166], "deflat": 97, "compression_opt": 97, "filter": [97, 164], "legal": 97, "ec": 97, "nn": 97, "chunk": 97, "guess": 97, "shuffl": 97, "fletcher32": 97, "pupyner": 97, "effort": 97, "unidata": 97, "ucar": 97, "17": [97, 125, 126, 138, 167], "netcdf3_class": 97, "netcdf3_64bit": 97, "netcdf4_class": 97, "clobber": [97, 124], "zlib": 97, "complevel": 97, "fastest": [97, 105], "poorest": 97, "slowest": 97, "checksum": 97, "trigger": 97, "chunksiz": 97, "hdf": 97, "least_significant_digit": 97, "quantiz": 97, "lossi": 97, "significantli": [97, 127], "endian": 97, "big": 97, "nativ": 97, "gain": 97, "ness": 97, "_fillvalu": 97, "silent": 97, "customari": 98, "_outdir": 98, "hdf5": 98, "write_aux_int": 98, "energi": [98, 102], "trace": 98, "p_function": 98, "absolut": [98, 115, 116, 127, 149, 150], "mf": [98, 106], "elementwis": 98, "total_energi": 98, "tidal": [98, 143], "whenc": 98, "compute_gauge_valu": 98, "sent": [98, 106], "logger": [98, 106], "interac": 98, "silenc": 98, "gone": 98, "reject": [98, 104, 148], "problemat": 98, "shaheen": 98, "getlogg": 98, "setlevel": 98, "desktop": 99, "mainli": 99, "mpirun": [99, 105, 116], "ll": [99, 108], "toolkit": [99, 168], "petsc4pi": [99, 105, 106, 116], "mercuri": 99, "anl": 99, "hg": 99, "bitbucket": 99, "buildsystem": 99, "config": 99, "zsh": 99, "architectur": 99, "csh": 99, "tcsh": 99, "setenv": 99, "cc": [99, 102, 108], "gcc": [99, 105], "cxx": 99, "mpich": 99, "phase": [99, 110, 124, 130, 149], "googlecod": 99, "iinstal": 99, "cython": 99, "demo": 99, "petsc_hello_world": 99, "hello": 99, "easy_instal": 99, "serial": [99, 103, 109, 161], "certainli": 99, "importantli": 99, "ng": 99, "lowerg": 99, "addition": [99, 158], "excerpt": 99, "320": 99, "partit": 99, "html_plot": 100, "interactive_plot": [100, 108], "3rd": [101, 104, 141], "user_bc_low": 101, "custom_bc": 101, "dim": [101, 102, 104], "qbc": [101, 104, 106], "xrang": 101, "aux_bc_low": 101, "aux_bc_upp": 101, "auxbc": [101, 104, 106], "damiansra": 101, "empyclaw": 101, "maxwell_1d_homogen": 101, "mail": [101, 107], "worthwhil": 101, "impati": 101, "reaction": 101, "diffus": 101, "psi": [101, 167, 170], "dq_src": [101, 104], "shockbubbl": 101, "rp_sourc": 101, "rp_": 102, "q_l": [102, 140, 141], "q_r": [102, 140, 141], "aux_l": [102, 140], "aux_r": [102, 140], "oft": 102, "he": 102, "miscellan": 102, "amdq": [102, 140], "fluctuat": [102, 104, 170], "apdq": [102, 140], "ith": 102, "leveque_book_2002": 102, "matrix": 102, "acoustics_1d_pi": 102, "zz": [102, 108], "advection_1d_pi": 102, "u_t": [102, 108], "burgers_1d_pi": 102, "efix": [102, 141], "entropi": [102, 141], "euler_1d_pi": 102, "exact": 102, "hll": 102, "w_1": 102, "q_hat": 102, "s_1": [102, 142], "u_l": [102, 141], "c_l": 102, "lambda_roe_1": 102, "lambda_roe_2": 102, "w_2": 102, "s_2": [102, 142], "u_r": [102, 141], "c_r": 102, "heat": 102, "gamma1": 102, "hllc": 102, "q_hat_l": 102, "q_hat_r": 102, "s_m": 102, "w_3": 102, "s_3": 102, "p_r": 102, "p_l": 102, "rho_l": 102, "s_l": 102, "rho_r": 102, "s_r": 102, "e_l": 102, "e_r": 102, "aug_glob": 102, "26": [102, 135, 136, 138], "calucl": 102, "newton": 102, "shallow_1d_pi": [102, 141], "wari": 102, "grav": [102, 141], "dry_toler": 102, "ubar": 102, "h_l": [102, 141], "h_r": [102, 141], "cbar": [102, 164], "a1": 102, "delta_hu": 102, "delta_h": 102, "a2": 102, "karg": 103, "reachabl": 103, "truli": 103, "capa": 103, "is_valid": [103, 106], "ioerror": 103, "unsuccess": 103, "signitur": 103, "set_all_st": 103, "Will": 103, "start_fram": 103, "acoustics_2d": 104, "sharpclawsolver2d": 104, "expens": [104, 115, 120, 125], "galerkin": 104, "instantan": 104, "bubbl": 104, "clawsolv": [104, 140], "sharpclawsolv": 104, "superclass": 104, "t_end": 104, "sharpclawsolver1d": 104, "riemann_solv": 104, "claw_packag": 104, "sharpclawnd": 104, "semi": 104, "discret": 104, "dq": [104, 162], "ought": 104, "molsolv": 104, "lim_typ": 104, "weno_ord": 104, "17th": 104, "time_integr": 104, "ssp33": 104, "strong": [104, 110], "shu": 104, "osher": 104, "ssp104": 104, "4th": 104, "ssplmm32": 104, "multistep": 104, "ssplmm43": 104, "ssprk22": 104, "butcher": 104, "lmm": 104, "char_decomp": 104, "characterist": 104, "transmiss": 104, "tfluct_solv": 104, "tfluct": 104, "default_tfluct": 104, "aux_time_dep": 104, "cfl_desir": [104, 148, 150, 152], "cfl_max": [104, 148, 150, 152], "call_before_step_each_stag": 104, "before_step": 104, "stage": [104, 143, 144, 162, 164], "accept_reject_step": 104, "check_3rd_ord_cond": 104, "step_index": 104, "dtfe": 104, "ssplmm": 104, "posteriori": 104, "violat": [104, 164], "muct": 104, "dqdt": 104, "get_dt_new": 104, "take_one_step": 104, "update_saved_valu": 104, "check_lmm_cond": 104, "0001": 104, "max_step": 104, "500": [104, 149, 152], "get_dt": 104, "succeed": 104, "step_hyperbol": 104, "my_custom_bc": 104, "soon": 104, "bc_arrai": 104, "difficulti": [105, 107, 111], "modern": [105, 118, 127, 140], "gnu": 105, "ibm": 105, "xlf": 105, "wiki": 105, "gfortranbinari": 105, "ce": 105, "enthought": [105, 107], "canopi": 105, "live": 106, "constructor": 106, "get_aux_glob": 106, "get_auxbc_from_aux": 106, "get_q_glob": 106, "get_qbc_from_q": 106, "set_aux_from_auxbc": 106, "fortran_modul": 106, "seem": [106, 111, 130, 147, 154], "fragil": 106, "interdepend": 106, "set_num_ghost": 106, "set_q_from_qbc": 106, "gauge_data": 106, "keep_gaug": 106, "hack": 106, "stencil_width": 106, "da": 106, "stencil": 106, "worth": 106, "temporari": 106, "processor": 106, "fset": 106, "consult": 107, "g77": 107, "undefin": 107, "bash_profil": [107, 146], "academ": 107, "epd": 107, "ordinarili": 107, "kappa": [108, 170], "eqnarrai": 108, "p_t": 108, "u_x": 108, "p_x": 108, "tipe": 108, "haven": [108, 110], "deepli": 108, "acquaint": 108, "framecount": 109, "counter": [109, 164], "get_count": 109, "reset_count": 109, "set_count": 109, "new_frame_num": 109, "verifyerror": 109, "add_parent_doc": 109, "check_diff": [109, 116], "abstol": 109, "reltol": 109, "compile_librari": 109, "source_list": 109, "module_nam": 109, "interface_funct": 109, "local_path": 109, "library_path": 109, "f2py_flag": 109, "ioexcept": 109, "f95": 109, "lgomp": 109, "o3": 109, "funrol": 109, "finlin": 109, "fdefault": 109, "construct_function_handl": 109, "function_nam": 109, "func": [109, 158], "convert_fort_double_to_float": 109, "0d0": 109, "gen_vari": [109, 116], "disable_petsc": 109, "runnabl": 109, "kernel": 109, "against": [109, 116, 124, 160], "test_app": [109, 116], "unrecogn": 109, "read_data_lin": 109, "inputfil": [109, 164], "num_entri": 109, "data_typ": 109, "run_app_from_main": 109, "run_seri": 109, "fun": 109, "decor": 109, "comm_world": 109, "check_valu": [109, 116], "januari": [110, 117, 125, 138], "ceas": 110, "python3stat": 110, "howto": 110, "pyport": 110, "bewar": [111, 164], "__file__": 111, "subpackag": 111, "_subpackag": 111, "forestclaw": [111, 123], "getusersitepackag": 111, "getsitepackag": 111, "bad": [111, 116], "harm": 111, "drawback": 111, "cmdline": 111, "echo": 111, "perturb": [112, 151, 162], "workshop": [113, 130], "ik": 113, "basin": 113, "distant": [113, 115], "parameter": [113, 127, 142, 151, 158, 159], "_surge_modul": 113, "workflow": [113, 153, 158], "concentr": 113, "hurrican": [113, 158], "katrina": 113, "directorti": 113, "orlean": 113, "atcf": [113, 127, 158, 159], "chile2010b": 114, "topotools_exampl": [114, 164], "regrid_interv": [115, 149, 150], "surround": [115, 164], "escap": [115, 150], "regrid_buffer_width": [115, 149, 150], "tradeoff": 115, "clustering_cutoff": [115, 149, 150], "amrnez": 115, "undivid": 115, "q_": [115, 140, 170], "divid": [115, 148], "exceed": [115, 127], "largest": [115, 143], "suppli": [115, 158, 167, 170], "constrain": 115, "forbidden": 115, "amrflag": 115, "doflag": 115, "dontflag": 115, "adjoint_flag": 115, "tolsp": 115, "errest": 115, "anywher": 115, "wave_toler": [115, 151], "perfom": 116, "yml": 116, "_output_old": 116, "_output_new": 116, "xxdiff": 116, "opendiff": 116, "_plots_old": 116, "_plots_new": 116, "discoveri": 116, "supplementari": 116, "prime": 116, "stdout": 116, "spawn": 116, "occasion": [116, 125], "failur": [116, 128, 144], "acoustics_3d_vari": 116, "combinatori": 116, "test_acoust": 116, "comprehens": 116, "test_shallow_spher": 116, "novemb": [118, 124, 125, 137, 138], "meson": [118, 137], "sphere_sourc": [118, 136, 137, 154], "checkpt_styl": [118, 124, 139, 148, 150], "granular": 118, "clawpack_tan": 118, "imshow_norm": 118, "imshow_alpha": 118, "facet": 118, "mpeg": 118, "movi": 118, "ffmpeg": 118, "mp4_movi": 118, "movie_fign": 118, "mp4": 118, "jsanim": [118, 119, 123, 135], "gif": 118, "movie_name_prefix": 118, "chile2010_": 118, "movie_": 118, "chile2010_fign": 118, "kill": 118, "enddo": [118, 167], "storag": [118, 124, 132], "topo_modul": 118, "ntogo": 118, "di": [118, 119], "cleanup": [118, 126], "ipython_displai": 119, "underflow": 119, "nest": [119, 125, 149, 150], "refactor": [119, 120, 121, 123, 125, 126, 128, 132], "geolib": [119, 123], "dtopo_modul": 119, "movetopo": 119, "cellgridintegr": 119, "topo_upd": 119, "cellgridintegrate2": 119, "dt_max_dtopo": [119, 151], "dt_initi": [119, 148, 150, 151, 152], "juli": [120, 121, 138], "nohup": 120, "recalcul": 120, "unnecessarili": 120, "clamshel": 120, "test_topotool": [120, 164], "octob": [121, 122, 123, 129, 130, 133, 134, 136, 137, 138], "dtdx1d": 121, "dtdy1d": 121, "jsanimation_frametool": 121, "rpn2_vc_advect": 121, "dtdtopo": 122, "refinementdata": 122, "ticklabel": 122, "114": 122, "didn": 122, "glitch": 122, "nbtool": 123, "formerli": 123, "makefile_kml": 123, "extran": 123, "compare_gaug": 123, "topoplotdata": 123, "favor": [123, 127, 137, 149, 164], "riemann_tool": [123, 141], "amrlib": 123, "dumpgaug": 123, "stepgrid_dimsplit": 123, "step2x": 123, "step2i": 123, "flux2_dimsplit": 123, "step3x": 123, "step3i": 123, "step3z": 123, "flux3_dimsplit": 123, "advection_3d_swirl": [123, 161], "advection_2d_inflow": 123, "allocat": 123, "igetsp": 123, "holland_storm_modul": 123, "stommel_storm_modul": 123, "constant_storm_modul": 123, "storm_modul": 123, "friction_modul": 123, "geoclaw_modul": 123, "consolid": 123, "amr_data_show": 124, "datadir": 124, "riemann_interact": 124, "nbviewer": 124, "maojr": 124, "ipynotebook": 124, "blob": [124, 141], "interactive_test": 124, "unstabl": 124, "guard": 124, "crash": [124, 148, 149], "chk00100": 124, "tck00100": 124, "chkaaaaa": 124, "tckaaaaa": 124, "chkbbbbb": 124, "tckbbbbb": 124, "tck": 124, "chk": 124, "flush": 124, "lose": 124, "unneed": 124, "spend": 124, "inconsist": 124, "__future__": 125, "absolute_import": 125, "print_funct": 125, "capabilit": 125, "num_proc": 125, "coupl": [125, 170], "instabl": [125, 132], "transon": 125, "insidi": 125, "enlarg": 125, "june": [126, 127, 128, 129, 138], "woodward": 126, "collela": 126, "blast": 126, "219": 126, "legend_tool": 126, "legend": [126, 142], "riemann_aug_jcp": 126, "geoclaw_riemann_util": 126, "challeng": 126, "timer": 126, "gradient": [126, 170], "xllower": 127, "yllower": 127, "capabili": 127, "landfal": 127, "highli": [127, 144], "code_of_conduct": 127, "conduct": 127, "plot_timing_stat": [127, 129], "226": 127, "cumul": 127, "maxgr": 127, "rnode": 127, "listofgrid": 127, "10000": [127, 164], "resiz": 127, "10k": 127, "bndlist": 127, "amr_2d": [127, 128], "nodal": 127, "owner": 127, "lookup": 127, "rearrang": 127, "303": 127, "capabilti": 127, "hurdat": [127, 158, 159], "jma": [127, 158, 159], "ibtrac": [127, 158], "tcvital": [127, 158, 159], "wind": [127, 151, 158, 159, 164], "holland": [127, 151, 159], "1980": [127, 151, 159], "stub": 127, "establis": 127, "hwrf": [127, 151, 159], "mimic": 127, "test_etopo1": [127, 162], "etopotool": [127, 162], "etopo1": [127, 142, 143, 162, 164, 166], "gave": 127, "incorrect": [127, 128, 144, 158], "308": 127, "287": 127, "hlle": 128, "adjoint_modul": 128, "amr_1d": 128, "adjointsup_modul": 128, "robustli": 128, "maketopo": [128, 162], "typo": 128, "subprocess": 129, "staff": 129, "timing_plot": 129, "mhd": 129, "faster": [129, 130, 132, 164], "clearer": [129, 132, 133], "topo_miss": 129, "bowl": 129, "slosh": 129, "3764278": [130, 138], "among": 130, "bzip2": 130, "unpack": 130, "get_remote_fil": [130, 164], "notebook_html": 130, "nbconvert": 130, "animation_tool": [130, 131], "ride": 130, "skip_patches_outside_xylimit": [130, 132], "ruled_rectangl": 130, "lagrangian_gaug": 130, "million": 130, "set_eta_init": [130, 144], "subsid": [130, 144, 151], "uplift": [130, 144, 151], "septemb": [131, 138], "4025432": [131, 138], "weren": 131, "verbosity_regrid": [131, 149, 150], "2021": [132, 133, 134, 135, 138], "4503024": [132, 138], "memsiz": [132, 149], "implicitli": [132, 151], "rpt2_geoclaw": [132, 141], "unnecessari": 132, "prepc": 132, "thought": [132, 143], "advertis": 132, "topotyp": [132, 151, 162], "5595424": [133, 138], "rp1_shallow_hl": 133, "geotiff": 133, "decemb": [134, 135, 138], "5781749": [134, 138], "segment": [134, 142], "2022": [135, 136, 138], "7026045": [135, 138], "trucat": 135, "svg": 135, "pcolor_kwarg": 135, "286": 135, "to_jshtml": 135, "8400237": [136, 138], "claw_python": 136, "pytest": 136, "add_attribut": 136, "cmd": 136, "fgmax_fin": 136, "fgmaxdata": 136, "compabl": 136, "xxx": [137, 162], "redon": 137, "fixed_grid_data": 137, "10076317": 138, "3528429": 138, "3237295": 138, "1405834": 138, "262111": 138, "50982": 138, "tchknnnnn": 139, "chknnnnn": [139, 148, 150, 152], "nnnnn": [139, 148], "containt": 139, "restart_fil": [139, 148, 150, 152], "commenc": 139, "undesir": 139, "fashion": 139, "traffic": [140, 167], "rp1": [140, 170], "maxm": 140, "ql": 140, "qr": 140, "auxl": 140, "auxr": 140, "mwave": 140, "q_i": [140, 170], "x_": [140, 170], "ell": 140, "cal": [140, 167, 170], "p_": [140, 170], "_ptwise": 140, "rp1_ptwise": 140, "rpn2_ptwise": 140, "rpt2_ptwise": 140, "har": 140, "x_i": [140, 167, 170], "jacobian": [140, 170], "use_fwav": [140, 148, 150, 152], "my_riemann_solv": 140, "solver_nam": 140, "sole": 140, "bmatrix": 141, "graviti": [141, 151], "rp1_shallow_roe_with_efix": 141, "shallow_roe_with_efix_1d": 141, "shallow_1d": 141, "dam_break": 141, "passiv": 141, "rp1_shallow_roe_trac": 141, "shallow_roe_tracer_1d": 141, "shallow_trac": 141, "rp1_shallow_bathymetry_fwav": 141, "shallow_bathymetry_fwave_1d": 141, "sill": 141, "rpn2_shallow_roe_with_efix": 141, "rpt2_shallow_roe_with_efix": 141, "shallow_roe_with_efix_2d": 141, "shallow_2d": 141, "radial_dam_break": 141, "rpn2_shallow_bathymetry_fwav": 141, "shallow_bathymetry_fwave_2d": 141, "rpn2_shallow_spher": 141, "rpt2_shallow_spher": 141, "shallow_sphere_2d": 141, "rossby_wav": 141, "costli": 141, "rpn2_geoclaw": 141, "sw_aug_2d": 141, "rpn2_sw_aug": 141, "reval": 141, "riemann_solut": 141, "plot_phas": 141, "inclus": 142, "union": [142, 162], "y_": 142, "scriptstyl": 142, "x_c": 142, "y_c": 142, "ldot": 142, "unequ": 142, "vstack": 142, "31": 142, "zm": 142, "rrzigzag": 142, "rr2": 142, "readlin": 142, "strip": [142, 164], "nrule": 142, "000000000": 142, "admiralti": 142, "inlet": 142, "kitsap": 142, "peninsula": 142, "strait": 142, "juan": 142, "fuca": 142, "ruledrectangle_admiraltyinlet": 142, "400": 142, "851": 142, "529": 142, "036": 142, "578": 142, "577": 142, "187": 142, "623": 142, "191": 142, "684": 142, "221": 142, "755": 142, "rr_admiralti": 142, "rr_name": 142, "compactli": 142, "enforc": 142, "x_center": 142, "y_center": 142, "logical_or": 142, "edgecolor": 142, "dark": 142, "loc": [142, 164], "129": 142, "degener": 142, "vancouv": 142, "shoal": 142, "inundataion": [143, 166], "relief": [143, 166], "msl": [143, 166], "hilo": [143, 166], "feet": [143, 166], "arc": 143, "presum": 143, "vastli": 143, "fall": [143, 151], "mhhw": 143, "astronom": 143, "aht": 143, "worst": 143, "spacial": 144, "variable_eta_init": [144, 151], "nearfield": 144, "steepli": 144, "siesmic": 144, "eta_init": 144, "ever": [147, 151], "ff9999": 147, "claw_pkg": [148, 149, 150, 151, 152], "analog": [148, 149], "capa_index": [148, 150, 152], "dt_variabl": [148, 150, 152], "output_q_compon": [148, 150, 152], "unsur": 148, "lenght": 148, "dt_max": [148, 150, 152], "stiff": 148, "retak": [148, 150, 152], "contamin": 148, "500000": 148, "steps_max": [148, 150, 152], "infinit": 148, "donor": [148, 150, 152], "upwind": 148, "transmit": 148, "transport": [148, 150, 152], "tranpsort": 148, "central": [148, 158, 159], "decomposit": 148, "srcn": [148, 167], "hyperol": 148, "src_split": [148, 150, 152], "thn": 148, "harder": 148, "checkpt_tim": [148, 150], "checkpt_interv": [148, 150], "refinement_ratios_x": [149, 150], "refinement_ratios_t": [149, 150, 151], "variable_dt_refinement_ratio": [149, 151], "xleft": [149, 150], "yleft": [149, 150], "travel": 149, "pt": [149, 150], "forbiddn": 149, "omp": 149, "spent": [149, 161], "1048575": 149, "4194303": 149, "8388607": 149, "dprint": [149, 150], "eprint": [149, 150], "edebug": [149, 150], "gprint": [149, 150], "bisect": [149, 150], "nprint": [149, 150], "pprint": [149, 150], "rprint": [149, 150], "sprint": [149, 150], "tprint": [149, 150], "uprint": [149, 150], "upbnd": [149, 150], "acoustics_2d_radi": [150, 167], "assert": [150, 152], "probdata": [150, 152], "new_userdata": [150, 152], "add_param": [150, 152], "medium": [150, 167], "000000e": 150, "000000": 150, "chk00006": [150, 152], "ntime": 150, "step_interv": 150, "00000e": 150, "900000": 150, "50000": 150, "amr_level_max": 150, "auxtyp": 150, "001000e": 150, "alg": 150, "toggl": 150, "err": 150, "est": 150, "proj": 150, "__name__": [150, 152], "__main__": [150, 152], "argv": [150, 152], "setrun_setgeo": 151, "refinement_data": 151, "speed_toler": 151, "earth_radiu": 151, "6367": 151, "5e3": 151, "friction_forc": 151, "manning_coeffici": 151, "delin": 151, "manning_break": 151, "file1info": 151, "file2info": 151, "dtopotyp": [151, 162], "qinit_typ": [151, 162], "qinitfil": 151, "qinitdata": 151, "coseism": 151, "surge_data": 151, "wind_forc": 151, "drag": 151, "drag_law": 151, "deterimin": [151, 164], "garret": 151, "powel": 151, "pressure_forc": 151, "wind_index": 151, "pressure_index": 151, "display_landfall_tim": 151, "wind_refin": 151, "r_refin": 151, "storm_specification_typ": 151, "chava": 151, "lin": 151, "emmanuel": 151, "storm_fil": [151, 158], "storm_specif": 151, "classic4": 152, "tout": 152, "javascript": 153, "publicli": 153, "develp": 154, "tropic": 154, "polar": 154, "variat": 154, "circumst": 154, "src1d": 157, "src3": [157, 167], "ensembl": 158, "my_storm": 158, "my_geoclaw_storm": 158, "imd": [158, 159], "nodataerror": 158, "nhc": 158, "japanes": 158, "meterolog": 158, "indian": 158, "meteorlog": 158, "datetiem": 158, "time_offset": 158, "eye_loc": 158, "ey": [158, 159], "decimc": 158, "max_wind_spe": 158, "max_wind_radiu": 158, "central_pressur": 158, "storm_radiu": 158, "iso": 158, "wind_spe": 158, "34kt": 158, "50kt": 158, "64kt": 158, "radii": 158, "categori": 158, "categor": 158, "cat_nam": 158, "car_nam": 158, "read_atcf": 158, "read_geoclaw": 158, "human": 158, "readabl": [158, 159], "read_hurdat": 158, "aoml": 158, "hrd": 158, "data_storm": 158, "single_storm": 158, "risen": 158, "read_ibtrac": 158, "sid": 158, "storm_nam": 158, "start_dat": 158, "agency_pref": 158, "wmo": 158, "usa": 158, "tokyo": 158, "newdelhi": 158, "reunion": 158, "bom": 158, "nadi": 158, "wellington": 158, "cma": 158, "hko": 158, "ds824": 158, "td9636": 158, "td9635": 158, "neumann": 158, "mlc": 158, "v4": 158, "unnam": 158, "wmo_": 158, "wmo_ag": 158, "usa_ag": 158, "closest": 158, "read_imd": 158, "read_jma": 158, "jp": 158, "eng": 158, "rsmc": 158, "hp": 158, "eg": 158, "besttrack": 158, "e_format_bst": 158, "read_tcvit": 158, "write_atcf": 158, "write_geoclaw": 158, "max_wind_radius_fil": 158, "storm_radius_fil": 158, "forecast": 158, "redund": 158, "write_hurdat": 158, "write_imd": 158, "write_jma": 158, "write_tcvit": 158, "available_format": 158, "available_model": 158, "fill_rad_w_other_sourc": 158, "storm_targ": 158, "interp_kwarg": 158, "tri": 158, "storm_ibtrac": 158, "path_to_ibtrac": 158, "2018300n26315": 158, "storm_atcf": 158, "path_to_atcf": 158, "fill_mwr": 158, "out_path": 158, "make_multi_structur": 158, "observerd": 159, "parametr": 159, "gride": 159, "dens": 159, "profil": [159, 164], "_storm_modul": 159, "stepgrid": 161, "850": 161, "853": 161, "288e": 161, "214": 161, "552": 161, "373e": 161, "92": 161, "774": 161, "370": 161, "259": 161, "260e": 161, "108": 161, "838": 161, "414": 161, "664": 161, "301e": 161, "440": 161, "392": 161, "473": 161, "014": 161, "801": 161, "508": 161, "447": 161, "413": 161, "402": 161, "483": 161, "472": 161, "470": 161, "85": 161, "uniformli": 162, "nw": 162, "deduc": 162, "input_path": 162, "output_path": 162, "nodatav": 162, "northernmost": 162, "west": 162, "convens": 162, "subsurfac": 162, "gigabyt": 162, "remote_topo_url": [162, 164], "topo1": 162, "navd88": 162, "determine_topo_typ": 164, "create_topo_func": 164, "topo1writ": 164, "topo2writ": 164, "topo3writ": 164, "swaphead": 164, "capab": 164, "mayb": 164, "in_poli": 164, "topo_func": 164, "unstructur": 164, "topo_fil": 164, "filter_region": 164, "generate_2d_topo": 164, "rai": 164, "cast": 164, "versu": 164, "arrang": 164, "x_mask": 164, "maskedarrai": 164, "interp_unstructur": 164, "fill_topo": 164, "delta_limit": 164, "no_data_valu": 164, "buffer_length": 164, "proximity_radiu": 164, "resolution_limit": 164, "gap": 164, "griddata": 164, "delta_x": 164, "delta_i": 164, "make_shoreline_xi": 164, "shoreline_xi": 164, "segement": 164, "npy": 164, "reload": 164, "long_lat": 164, "cb_kwarg": 164, "linestyl": 164, "compens": 164, "shrink": 164, "nc_param": 164, "read_head": 164, "swap": 164, "replace_no_data_valu": 164, "replace_valu": 164, "smooth_data": 164, "ball": 164, "inf": 164, "oscillatori": 164, "header_styl": 164, "7e": 164, "infer": 164, "arcgi": 164, "asc": 164, "millimet": 164, "15e": 164, "7i": 164, "coorind": 164, "specfi": 164, "topgraphi": 164, "__________________o": 164, "fetch_topo_url": 164, "local_fnam": 164, "ask_us": 164, "get_topo": 164, "claw_topo_download": 164, "run_exampl": 164, "topo_fnam": 164, "remote_directori": 164, "zvar": 164, "return_topo": 164, "return_xarrai": 164, "band1": 164, "xarrai": 164, "xarray_d": 164, "etopo_sample_2min": 164, "0f": 164, "western": 164, "outputfil": 164, "outfil": 164, "nxpoint": 164, "nypoint": 164, "topotype1": 164, "99999": 164, "forget": 165, "whichclaw": 165, "gnufcompil": 165, "tarbal": 165, "config_fc": 165, "fcompil": 165, "printenv": 165, "154": 165, "wc": 166, "catalog": 166, "mllw": 166, "gloss": 166, "sonel": 166, "mbc": 167, "5d0": 167, "heterogen": 167, "b4stepn": 167, "advection_2d_swirl": 167, "1drad": 167, "mx1d": 167, "q1d": 167, "aux1d": 167, "reader": 168, "time_files_scanf": 168, "04d": 168, "grid_files_scanf": 168, "silo": 168, "vm": 169, "equiv": 170, "m_w": 170, "sum_": 170, "sum_p": 170, "qquad": 170, "nonconserv": 170, "eqn": 170, "claw_1dnoncon": 170, "tild": 170, "f_": 170, "kappa_i": 170}, "objects": {"": [[0, 0, 1, "", "ClawPlotAxes"], [1, 0, 1, "", "ClawPlotData"], [2, 0, 1, "", "ClawPlotFigure"], [3, 0, 1, "", "ClawPlotItem"], [1, 2, 1, "", "clearfigures"], [1, 2, 1, "", "clearframes"], [1, 2, 1, "", "getaxes"], [1, 2, 1, "", "getfigure"], [3, 2, 1, "", "getframe"], [3, 2, 1, "", "gethandle"], [1, 2, 1, "", "getitem"], [1, 2, 1, "", "iplotclaw"], [2, 2, 1, "", "new_plotaxes"], [1, 2, 1, "", "new_plotfigure"], [0, 2, 1, "", "new_plotitem"], [1, 2, 1, "", "plotframe"], [1, 2, 1, "", "printframes"], [1, 2, 1, "", "showitems"]], "clawpack.geoclaw": [[32, 1, 0, "-", "dtopotools"], [35, 1, 0, "-", "fgmax_tools"], [37, 1, 0, "-", "fgout_tools"], [63, 1, 0, "-", "kmltools"], [164, 1, 0, "-", "topotools"], [51, 1, 0, "-", "util"]], "clawpack.geoclaw.dtopotools": [[32, 0, 1, "", "CSVFault"], [32, 0, 1, "", "DTopography"], [32, 0, 1, "", "DTopography1d"], [32, 0, 1, "", "Fault"], [32, 0, 1, "", "Fault1d"], [32, 3, 1, "", "Mw"], [32, 0, 1, "", "SiftFault"], [32, 0, 1, "", "SubFault"], [32, 0, 1, "", "SubFault1d"], [32, 0, 1, "", "SubdividedPlaneFault"], [32, 0, 1, "", "TensorProductFault"], [32, 0, 1, "", "UCSBFault"], [32, 3, 1, "", "plot_dZ_colors"], [32, 3, 1, "", "plot_dZ_contours"], [32, 3, 1, "", "rise_fraction"], [32, 3, 1, "", "strike_direction"]], "clawpack.geoclaw.dtopotools.CSVFault": [[32, 2, 1, "", "read"]], "clawpack.geoclaw.dtopotools.DTopography": [[32, 2, 1, "", "dZ_at_t"], [32, 2, 1, "", "dZ_max"], [32, 2, 1, "", "plot_dZ_colors"], [32, 2, 1, "", "plot_dZ_contours"], [32, 2, 1, "", "read"], [32, 2, 1, "", "write"]], "clawpack.geoclaw.dtopotools.DTopography1d": [[32, 2, 1, "", "dZ_at_t"], [32, 2, 1, "", "dZ_cellave_at_t"], [32, 2, 1, "", "read"], [32, 2, 1, "", "write"]], "clawpack.geoclaw.dtopotools.Fault": [[32, 2, 1, "", "Mo"], [32, 2, 1, "", "Mw"], [32, 2, 1, "", "containing_rect"], [32, 2, 1, "", "create_dtopo_xy"], [32, 2, 1, "", "create_dtopography"], [32, 2, 1, "", "plot_subfaults"], [32, 2, 1, "", "plot_subfaults_depth"], [32, 2, 1, "", "read"], [32, 2, 1, "", "set_dynamic_slip"], [32, 2, 1, "", "write"]], "clawpack.geoclaw.dtopotools.SiftFault": [[32, 2, 1, "", "set_subfaults"]], "clawpack.geoclaw.dtopotools.SubFault": [[32, 2, 1, "", "Mo"], [32, 2, 1, "", "calculate_geometry"], [32, 2, 1, "", "calculate_geometry_triangles"], [32, 4, 1, "", "centers"], [32, 2, 1, "", "convert_to_standard_units"], [32, 5, 1, "", "coordinate_specification"], [32, 4, 1, "", "corners"], [32, 5, 1, "", "depth"], [32, 5, 1, "", "dip"], [32, 2, 1, "", "dynamic_slip"], [32, 4, 1, "", "gauss_pts"], [32, 5, 1, "", "latitude"], [32, 5, 1, "", "length"], [32, 5, 1, "", "longitude"], [32, 5, 1, "", "mu"], [32, 2, 1, "", "okada"], [32, 5, 1, "", "rake"], [32, 5, 1, "", "rise_shape"], [32, 5, 1, "", "rise_time"], [32, 5, 1, "", "rise_time_starting"], [32, 5, 1, "", "rupture_time"], [32, 5, 1, "", "rupture_type"], [32, 2, 1, "", "set_corners"], [32, 5, 1, "", "slip"], [32, 5, 1, "", "strike"], [32, 5, 1, "", "width"]], "clawpack.geoclaw.dtopotools.SubFault1d": [[32, 5, 1, "", "coordinate_specification"], [32, 5, 1, "", "latitude"], [32, 5, 1, "", "length"], [32, 5, 1, "", "longitude"], [32, 5, 1, "", "rake"], [32, 5, 1, "", "strike"]], "clawpack.geoclaw.dtopotools.SubdividedPlaneFault": [[32, 2, 1, "", "subdivide"]], "clawpack.geoclaw.dtopotools.UCSBFault": [[32, 2, 1, "", "read"]], "clawpack.geoclaw.fgmax_tools": [[35, 0, 1, "", "FGmaxGrid"], [35, 3, 1, "", "adjust_fgmax_1d"]], "clawpack.geoclaw.fgmax_tools.FGmaxGrid": [[35, 2, 1, "", "bounding_box"], [35, 2, 1, "", "interp_dz"], [35, 2, 1, "", "ps4_to_arrays"], [35, 2, 1, "", "read_fgmax_grids_data"], [35, 2, 1, "", "read_output"], [35, 2, 1, "", "write_to_fgmax_data"]], "clawpack.geoclaw.fgout_tools": [[37, 0, 1, "", "FGoutFrame"], [37, 0, 1, "", "FGoutGrid"], [37, 3, 1, "", "get_as_array"], [37, 3, 1, "", "make_fgout_fcn_xy"], [37, 3, 1, "", "make_fgout_fcn_xyt"], [37, 3, 1, "", "print_netcdf_info"], [37, 3, 1, "", "read_netcdf"], [37, 3, 1, "", "read_netcdf_arrays"], [37, 3, 1, "", "write_netcdf"]], "clawpack.geoclaw.fgout_tools.FGoutFrame": [[37, 4, 1, "", "B"], [37, 4, 1, "", "eta"], [37, 4, 1, "", "h"], [37, 4, 1, "", "hss"], [37, 4, 1, "", "hu"], [37, 4, 1, "", "hv"], [37, 4, 1, "", "s"], [37, 4, 1, "", "u"], [37, 4, 1, "", "v"]], "clawpack.geoclaw.fgout_tools.FGoutGrid": [[37, 4, 1, "", "X"], [37, 4, 1, "", "Y"], [37, 4, 1, "", "extent_centers"], [37, 4, 1, "", "extent_edges"], [37, 2, 1, "", "read_fgout_grids_data"], [37, 2, 1, "", "read_frame"], [37, 2, 1, "", "set_plotdata"], [37, 2, 1, "", "write_to_fgout_data"], [37, 4, 1, "", "x"], [37, 4, 1, "", "y"]], "clawpack.geoclaw.kmltools": [[63, 3, 1, "", "box2kml"], [63, 3, 1, "", "deg2dms"], [63, 3, 1, "", "dtopo2kml"], [63, 3, 1, "", "f2s"], [63, 3, 1, "", "fgmax2kml"], [63, 3, 1, "", "fgout2kml"], [63, 3, 1, "", "gauges2kml"], [63, 3, 1, "", "kml_build_colorbar"], [63, 3, 1, "", "kml_cb"], [63, 3, 1, "", "kml_png"], [63, 3, 1, "", "kml_timespan"], [63, 3, 1, "", "line2kml"], [63, 3, 1, "", "make_input_data_kmls"], [63, 3, 1, "", "pcolorcells_for_kml"], [63, 3, 1, "", "png2kml"], [63, 3, 1, "", "poly2kml"], [63, 3, 1, "", "quad2kml"], [63, 3, 1, "", "regions2kml"], [63, 3, 1, "", "topo2kml"], [63, 3, 1, "", "topo2kmz"], [63, 3, 1, "", "transect2kml"]], "clawpack.geoclaw.surge": [[158, 1, 0, "-", "storm"]], "clawpack.geoclaw.surge.storm": [[158, 6, 1, "", "NoDataError"], [158, 0, 1, "", "Storm"], [158, 3, 1, "", "available_formats"], [158, 3, 1, "", "available_models"], [158, 3, 1, "", "fill_rad_w_other_source"], [158, 3, 1, "", "make_multi_structure"]], "clawpack.geoclaw.surge.storm.Storm": [[158, 2, 1, "", "category"], [158, 2, 1, "", "read"], [158, 2, 1, "", "read_atcf"], [158, 2, 1, "", "read_geoclaw"], [158, 2, 1, "", "read_hurdat"], [158, 2, 1, "", "read_ibtracs"], [158, 2, 1, "", "read_imd"], [158, 2, 1, "", "read_jma"], [158, 2, 1, "", "read_tcvitals"], [158, 2, 1, "", "write"], [158, 2, 1, "", "write_atcf"], [158, 2, 1, "", "write_geoclaw"], [158, 2, 1, "", "write_hurdat"], [158, 2, 1, "", "write_imd"], [158, 2, 1, "", "write_jma"], [158, 2, 1, "", "write_tcvitals"]], "clawpack.geoclaw.topotools": [[164, 0, 1, "", "Topography"], [164, 3, 1, "", "create_topo_func"], [164, 3, 1, "", "determine_topo_type"], [164, 3, 1, "", "fetch_topo_url"], [164, 3, 1, "", "get_topo"], [164, 3, 1, "", "read_netcdf"], [164, 3, 1, "", "swapheader"], [164, 3, 1, "", "topo1writer"], [164, 3, 1, "", "topo2writer"], [164, 3, 1, "", "topo3writer"]], "clawpack.geoclaw.topotools.Topography": [[164, 4, 1, "", "X"], [164, 4, 1, "", "Y"], [164, 4, 1, "", "Z"], [164, 2, 1, "", "crop"], [164, 4, 1, "", "delta"], [164, 4, 1, "", "extent"], [164, 2, 1, "", "generate_2d_coordinates"], [164, 2, 1, "", "generate_2d_topo"], [164, 2, 1, "", "in_poly"], [164, 2, 1, "", "interp_unstructured"], [164, 2, 1, "", "make_shoreline_xy"], [164, 2, 1, "", "plot"], [164, 2, 1, "", "read"], [164, 2, 1, "", "read_header"], [164, 2, 1, "", "replace_no_data_values"], [164, 2, 1, "", "replace_values"], [164, 2, 1, "", "set_xyZ"], [164, 2, 1, "", "smooth_data"], [164, 2, 1, "", "write"], [164, 4, 1, "", "x"], [164, 4, 1, "", "y"], [164, 4, 1, "", "z"]], "clawpack.geoclaw.util": [[51, 3, 1, "", "bearing"], [51, 3, 1, "", "dist_latlong2meters"], [51, 3, 1, "", "dist_meters2latlong"], [51, 3, 1, "", "dms2decimal"], [51, 3, 1, "", "fetch_noaa_tide_data"], [51, 3, 1, "", "gctransect"], [51, 3, 1, "", "haversine"], [51, 3, 1, "", "inv_haversine"]], "clawpack.petclaw.geometry": [[94, 0, 1, "", "Domain"], [94, 0, 1, "", "Patch"]], "clawpack.petclaw.geometry.Domain": [[94, 5, 1, "", "dimensional_split"], [94, 5, 1, "", "fwave"], [94, 5, 1, "", "kernel_language"], [94, 5, 1, "", "mthlim"], [94, 5, 1, "", "order"], [94, 5, 1, "", "source_split"], [94, 5, 1, "", "step_source"], [94, 5, 1, "", "transverse_waves"], [94, 5, 1, "", "verbosity"]], "clawpack.petclaw.state": [[106, 0, 1, "", "State"]], "clawpack.petclaw.state.State": [[106, 4, 1, "", "F"], [106, 4, 1, "", "aux"], [106, 4, 1, "", "fset"], [106, 5, 1, "", "gauge_data"], [106, 2, 1, "", "get_aux_global"], [106, 2, 1, "", "get_auxbc_from_aux"], [106, 2, 1, "", "get_q_global"], [106, 2, 1, "", "get_qbc_from_q"], [106, 5, 1, "", "keep_gauges"], [106, 4, 1, "", "mF"], [106, 4, 1, "", "mp"], [106, 4, 1, "", "num_aux"], [106, 4, 1, "", "num_eqn"], [106, 4, 1, "", "p"], [106, 5, 1, "", "problem_data"], [106, 4, 1, "", "q"], [106, 2, 1, "", "set_num_ghost"], [106, 5, 1, "", "t"]], "clawpack.pyclaw.classic.solver": [[104, 0, 1, "", "ClawSolver"]], "clawpack.pyclaw.classic.solver.ClawSolver": [[104, 5, 1, "", "fwave"], [104, 5, 1, "", "kernel_language"], [104, 5, 1, "", "mthlim"], [104, 5, 1, "", "order"], [104, 2, 1, "", "setup"], [104, 5, 1, "", "source_split"], [104, 2, 1, "", "step"], [104, 2, 1, "", "step_hyperbolic"], [104, 5, 1, "", "step_source"], [104, 5, 1, "", "verbosity"]], "clawpack.pyclaw.controller": [[91, 0, 1, "", "Controller"]], "clawpack.pyclaw.controller.Controller": [[91, 5, 1, "", "F_file_name"], [91, 4, 1, "", "F_path"], [91, 2, 1, "", "check_validity"], [91, 5, 1, "", "compute_F"], [91, 5, 1, "", "compute_p"], [91, 5, 1, "", "file_prefix_p"], [91, 5, 1, "", "frames"], [91, 5, 1, "", "keep_copy"], [91, 5, 1, "", "nstepout"], [91, 5, 1, "", "num_output_times"], [91, 5, 1, "", "out_times"], [91, 5, 1, "", "outdir"], [91, 4, 1, "", "outdir_p"], [91, 5, 1, "", "output_file_prefix"], [91, 5, 1, "", "output_format"], [91, 5, 1, "", "output_options"], [91, 5, 1, "", "output_style"], [91, 5, 1, "", "overwrite"], [91, 2, 1, "", "plot"], [91, 5, 1, "", "plotdata"], [91, 2, 1, "", "run"], [91, 5, 1, "", "rundir"], [91, 5, 1, "", "runmake"], [91, 5, 1, "", "savecode"], [91, 5, 1, "", "solver"], [91, 5, 1, "", "tfinal"], [91, 4, 1, "", "verbosity"], [91, 5, 1, "", "viewable_attributes"], [91, 5, 1, "", "write_aux_always"], [91, 5, 1, "", "write_aux_init"], [91, 5, 1, "", "xclawcmd"], [91, 5, 1, "", "xclawerr"], [91, 5, 1, "", "xclawout"], [91, 5, 1, "", "xdir"]], "clawpack.pyclaw.fileio": [[97, 1, 0, "-", "ascii"], [97, 1, 0, "-", "binary"], [97, 1, 0, "-", "hdf5"], [97, 1, 0, "-", "netcdf"]], "clawpack.pyclaw.fileio.ascii": [[97, 3, 1, "", "read"], [97, 3, 1, "", "read_array"], [97, 3, 1, "", "read_patch_header"], [97, 3, 1, "", "read_t"], [97, 3, 1, "", "write"], [97, 3, 1, "", "write_array"]], "clawpack.pyclaw.fileio.binary": [[97, 3, 1, "", "read"]], "clawpack.pyclaw.fileio.hdf5": [[97, 3, 1, "", "read"], [97, 3, 1, "", "write"]], "clawpack.pyclaw.fileio.netcdf": [[97, 3, 1, "", "read"], [97, 3, 1, "", "write"]], "clawpack.pyclaw.geometry": [[94, 0, 1, "", "Dimension"], [94, 0, 1, "", "Domain"], [94, 0, 1, "", "Grid"], [94, 0, 1, "", "Patch"]], "clawpack.pyclaw.geometry.Dimension": [[94, 4, 1, "", "centers"], [94, 2, 1, "", "centers_with_ghost"], [94, 4, 1, "", "delta"], [94, 4, 1, "", "nodes"], [94, 2, 1, "", "nodes_with_ghost"]], "clawpack.pyclaw.geometry.Domain": [[94, 4, 1, "", "grid"], [94, 4, 1, "", "num_dim"], [94, 4, 1, "", "patch"]], "clawpack.pyclaw.geometry.Grid": [[94, 2, 1, "", "add_dimension"], [94, 2, 1, "", "add_gauges"], [94, 2, 1, "", "c_center"], [94, 4, 1, "", "c_centers"], [94, 2, 1, "", "c_centers_with_ghost"], [94, 4, 1, "", "c_nodes"], [94, 2, 1, "", "c_nodes_with_ghost"], [94, 4, 1, "", "dimensions"], [94, 5, 1, "", "gauge_dir_name"], [94, 5, 1, "", "gauge_file_names"], [94, 5, 1, "", "gauge_files"], [94, 5, 1, "", "gauges"], [94, 2, 1, "", "get_dim_attribute"], [94, 4, 1, "", "num_dim"], [94, 2, 1, "", "p_center"], [94, 4, 1, "", "p_centers"], [94, 4, 1, "", "p_nodes"], [94, 2, 1, "", "plot"], [94, 2, 1, "", "setup_gauge_files"]], "clawpack.pyclaw.geometry.Patch": [[94, 2, 1, "", "add_dimension"], [94, 4, 1, "", "delta"], [94, 4, 1, "", "dimensions"], [94, 2, 1, "", "get_dim_attribute"], [94, 5, 1, "", "level"], [94, 4, 1, "", "lower_global"], [94, 4, 1, "", "name"], [94, 4, 1, "", "num_cells_global"], [94, 4, 1, "", "num_dim"], [94, 5, 1, "", "patch_index"], [94, 4, 1, "", "upper_global"]], "clawpack.pyclaw.limiters": [[92, 1, 0, "-", "tvd"]], "clawpack.pyclaw.limiters.tvd": [[92, 3, 1, "", "arora_roe"], [92, 3, 1, "", "beta_limiter"], [92, 3, 1, "", "cada_torrilhon_limiter"], [92, 3, 1, "", "cada_torrilhon_limiter_nonlinear"], [92, 3, 1, "", "cfl_superbee"], [92, 3, 1, "", "cfl_superbee_theta"], [92, 3, 1, "", "hyperbee_limiter"], [92, 3, 1, "", "limit"], [92, 3, 1, "", "mc_limiter"], [92, 3, 1, "", "minmod_limiter"], [92, 3, 1, "", "superbee_limiter"], [92, 3, 1, "", "superpower_limiter"], [92, 3, 1, "", "theta_limiter"], [92, 3, 1, "", "upper_bound_limiter"], [92, 3, 1, "", "van_leer_klein_sharpening_limiter"]], "clawpack.pyclaw.sharpclaw.solver": [[104, 0, 1, "", "SharpClawSolver"]], "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver": [[104, 2, 1, "", "accept_reject_step"], [104, 5, 1, "", "aux_time_dep"], [104, 5, 1, "", "call_before_step_each_stage"], [104, 5, 1, "", "cfl_desired"], [104, 5, 1, "", "cfl_max"], [104, 5, 1, "", "char_decomp"], [104, 2, 1, "", "check_3rd_ord_cond"], [104, 2, 1, "", "dq"], [104, 5, 1, "", "dq_src"], [104, 2, 1, "", "dqdt"], [104, 5, 1, "", "fwave"], [104, 2, 1, "", "get_dt_new"], [104, 5, 1, "", "kernel_language"], [104, 5, 1, "", "lim_type"], [104, 5, 1, "", "num_ghost"], [104, 2, 1, "", "setup"], [104, 2, 1, "", "step"], [104, 5, 1, "", "tfluct"], [104, 5, 1, "", "tfluct_solver"], [104, 5, 1, "", "time_integrator"], [104, 2, 1, "", "update_saved_values"], [104, 5, 1, "", "weno_order"]], "clawpack.pyclaw.solution": [[103, 0, 1, "", "Solution"]], "clawpack.pyclaw.solution.Solution": [[103, 2, 1, "", "is_valid"], [103, 4, 1, "", "patch"], [103, 2, 1, "", "plot"], [103, 2, 1, "", "read"], [103, 2, 1, "", "set_all_states"], [103, 4, 1, "", "start_frame"], [103, 4, 1, "", "state"], [103, 2, 1, "", "write"]], "clawpack.pyclaw.state": [[106, 0, 1, "", "State"]], "clawpack.pyclaw.state.State": [[106, 5, 1, "", "F"], [106, 5, 1, "", "gauge_data"], [106, 2, 1, "", "get_aux_global"], [106, 2, 1, "", "get_auxbc_from_aux"], [106, 2, 1, "", "get_q_global"], [106, 2, 1, "", "get_qbc_from_q"], [106, 2, 1, "", "is_valid"], [106, 5, 1, "", "keep_gauges"], [106, 4, 1, "", "mF"], [106, 4, 1, "", "mp"], [106, 4, 1, "", "num_aux"], [106, 4, 1, "", "num_eqn"], [106, 5, 1, "", "p"], [106, 5, 1, "", "problem_data"], [106, 2, 1, "", "set_aux_from_auxbc"], [106, 2, 1, "", "set_cparam"], [106, 2, 1, "", "set_num_ghost"], [106, 2, 1, "", "set_q_from_qbc"], [106, 5, 1, "", "t"]], "clawpack.pyclaw": [[109, 1, 0, "-", "util"]], "clawpack.pyclaw.util": [[109, 0, 1, "", "FrameCounter"], [109, 6, 1, "", "VerifyError"], [109, 3, 1, "", "add_parent_doc"], [109, 3, 1, "", "check_diff"], [109, 3, 1, "", "compile_library"], [109, 3, 1, "", "construct_function_handle"], [109, 3, 1, "", "convert_fort_double_to_float"], [109, 3, 1, "", "gen_variants"], [109, 3, 1, "", "read_data_line"], [109, 3, 1, "", "run_app_from_main"], [109, 3, 1, "", "run_serialized"], [109, 3, 1, "", "test_app"]], "clawpack.pyclaw.util.FrameCounter": [[109, 2, 1, "", "get_counter"], [109, 2, 1, "", "increment"], [109, 2, 1, "", "reset_counter"], [109, 2, 1, "", "set_counter"]], "clawpack.riemann": [[102, 1, 0, "-", "acoustics_1D_py"], [102, 1, 0, "-", "advection_1D_py"], [102, 1, 0, "-", "burgers_1D_py"], [102, 1, 0, "-", "euler_1D_py"], [102, 1, 0, "-", "shallow_1D_py"]], "clawpack.riemann.acoustics_1D_py": [[102, 3, 1, "", "acoustics_1D"]], "clawpack.riemann.advection_1D_py": [[102, 3, 1, "", "advection_1D"]], "clawpack.riemann.burgers_1D_py": [[102, 3, 1, "", "burgers_1D"]], "clawpack.riemann.euler_1D_py": [[102, 3, 1, "", "euler_exact_1D"], [102, 3, 1, "", "euler_hll_1D"], [102, 3, 1, "", "euler_hllc_1D"], [102, 3, 1, "", "euler_roe_1D"]], "clawpack.riemann.shallow_1D_py": [[102, 3, 1, "", "shallow_exact_1D"], [102, 3, 1, "", "shallow_fwave_1d"], [102, 3, 1, "", "shallow_hll_1D"], [102, 3, 1, "", "shallow_roe_1D"]]}, "objtypes": {"0": "py:class", "1": "py:module", "2": "py:method", "3": "py:function", "4": "py:property", "5": "py:attribute", "6": "py:exception"}, "objnames": {"0": ["py", "class", "Python class"], "1": ["py", "module", "Python module"], "2": ["py", "method", "Python method"], "3": ["py", "function", "Python function"], "4": ["py", "property", "Python property"], "5": ["py", "attribute", "Python attribute"], "6": ["py", "exception", "Python exception"]}, "titleterms": {"clawplotax": 0, "attribut": [0, 1, 2, 3, 29, 34, 55, 82, 142], "gaug": [0, 47, 55, 64, 98, 166], "plot": [0, 3, 13, 24, 27, 34, 36, 47, 50, 53, 55, 64, 66, 71, 80, 81, 82, 83, 84, 93, 99, 100, 116, 147, 153, 165, 168], "method": [0, 1, 2, 3, 142, 170], "clawplotdata": 1, "clawplotfigur": 2, "clawplotitem": [3, 82], "special": [3, 149], "all": [3, 62, 70], "1d": [3, 8, 18], "plot_typ": 3, "1d_plot": 3, "1d_fill_between": 3, "1d_from_2d_data": 3, "2d": [3, 19, 140], "2d_contour": 3, "2d_pcolor": 3, "2d_imshow": 3, "2d_hillshad": 3, "amr": [3, 5, 6, 24, 70, 76, 115, 142, 149, 151], "colorbar": [3, 55], "about": [4, 86], "thi": [4, 58], "softwar": [4, 17], "licens": [4, 65, 86], "author": 4, "cite": [4, 96], "work": [4, 35, 37, 93, 163, 164, 167], "fund": [4, 86], "guid": [5, 30, 58, 59, 113, 114], "adjoint": 5, "flag": [5, 6, 66, 70, 115, 142, 149], "us": [5, 13, 18, 19, 27, 31, 36, 41, 52, 56, 62, 64, 67, 71, 73, 76, 78, 98, 101, 104, 107, 140, 141, 144, 147, 165, 167], "geoclaw": [5, 15, 16, 20, 24, 27, 42, 48, 49, 50, 51, 52, 53, 55, 76, 79, 83, 112, 115, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 142, 145, 151, 156, 157], "adapt": [6, 16, 27, 41], "mesh": [6, 27], "refin": [6, 16, 27, 41, 115, 151], "algorithm": [6, 17, 70, 78, 170], "ghost": 6, "cell": [6, 42, 142, 151], "boundari": [6, 16, 101, 167, 170], "condit": [6, 16, 101, 108, 167, 170], "choos": [6, 70], "initi": [6, 42, 70, 101, 108, 144, 151, 167], "finer": 6, "grid": [6, 16, 34, 35, 36, 37, 49, 57, 64, 76, 94, 151], "For": 6, "more": [6, 39, 43], "detail": [6, 7, 48], "amrclaw": [7, 8, 9, 10, 20, 27, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 149, 150, 167], "descript": [7, 48], "content": [7, 27, 30, 42, 48, 70, 82, 88, 98, 104, 116, 142], "problem": [8, 89, 101, 108, 167], "old": 8, "approach": 8, "deprec": [8, 151], "doxygen": 9, "document": [9, 11, 32, 35, 37, 51, 58, 59, 63, 96, 126, 127, 155, 164], "flowchart": 10, "applic": [11, 12, 17, 27, 28, 66, 74, 99], "convert": [11, 21, 22], "readm": 11, "rst": 11, "html": [11, 84], "code": [11, 18, 19, 27, 30, 42, 50, 61, 62, 79, 116, 165, 167], "clawcode2html": 11, "clawpack": [12, 13, 17, 20, 21, 22, 23, 24, 25, 26, 27, 31, 46, 56, 58, 59, 60, 61, 66, 78, 79, 89, 92, 104, 105, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 141, 152, 169], "repositori": [12, 20, 25, 30, 54, 58, 59, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 140], "jupyt": [12, 31, 40, 153], "notebook": [12, 31, 40, 110, 153], "submodul": 12, "exampl": [12, 19, 27, 28, 34, 36, 38, 39, 40, 42, 45, 47, 50, 55, 62, 70, 71, 74, 80, 93, 96, 99, 142], "includ": [12, 58], "amazon": 13, "web": 13, "servic": 13, "ec2": 13, "ami": 13, "find": [13, 70, 82], "launch": 13, "an": [13, 38, 39, 40, 55, 64, 70, 74, 99], "instanc": 13, "log": [13, 98], "your": [13, 30, 31, 39, 55, 99, 101, 105, 153, 160], "view": 13, "result": [13, 50, 55, 100, 153], "webpag": [13, 58, 153], "directli": [13, 36], "from": [13, 21, 22, 24, 27, 30, 32, 35, 37, 40, 42, 45, 51, 58, 63, 70, 84, 89, 93, 100, 142, 164], "transfer": 13, "file": [13, 31, 33, 34, 36, 42, 55, 57, 58, 59, 61, 67, 71, 82, 84, 116, 139, 142, 151, 162, 167], "stop": [13, 31], "creat": [13, 31, 42, 55, 59, 70, 71, 74, 88], "own": [13, 31, 101], "b4run": 14, "function": [14, 51, 63, 69, 70, 84, 98, 104, 170], "b4step": [15, 167], "default": [15, 112, 144, 145, 156, 157], "routin": [15, 24, 67, 83, 112, 145, 156, 157], "clamshel": 16, "sphere": [16, 154], "user": [16, 26, 78, 167], "defin": [16, 142], "bibliographi": 17, "paper": 17, "describ": 17, "other": [17, 20, 25, 26, 31, 34, 58, 82, 118, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138, 142, 144], "refer": [17, 27, 56, 96, 110], "boussinesq": [18, 19], "solver": [18, 19, 78, 88, 96, 101, 102, 104, 108, 140, 141, 167], "One": [18, 49, 140, 141, 170], "space": [18, 19, 49, 170], "dimens": [18, 19, 49, 94, 141, 170], "makefil": [18, 19, 43, 66, 67, 101, 139], "setrun": [18, 19, 24, 47, 148, 149, 150, 151, 152], "py": [18, 19, 24, 36, 82, 111, 147, 148, 149, 150, 151, 152], "two": [19, 141], "type": 19, "dispers": 19, "equat": [19, 102, 108, 141], "The": [19, 55, 69, 70, 71, 108], "sgn": 19, "madsen": 19, "sorensen": 19, "m": 19, "prerequisit": [19, 85], "wave": [19, 140, 170], "break": 19, "switch": [19, 71], "swe": 19, "chang": [20, 24, 82, 104, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "master": [20, 30], "sinc": 20, "v5": [20, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "10": [20, 118], "0": [20, 22, 24, 31, 117, 118, 119, 120, 123, 125, 127, 128, 130, 132, 135], "ar": [20, 82, 118, 127, 128, 129, 130, 131, 132, 133, 134, 135], "backward": [20, 118, 127, 128, 129, 130, 131, 132, 133, 134, 135], "compat": [20, 118, 127, 128, 129, 130, 131, 132, 133, 134, 135], "gener": [20, 24, 32, 35, 37, 51, 58, 63, 127, 128, 129, 130, 131, 132, 133, 134, 135, 137, 151, 164], "classic": [20, 27, 38, 39, 104, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 148, 152, 160], "clawutil": [20, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "visclaw": [20, 27, 64, 81, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137], "riemann": [20, 27, 96, 101, 102, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 140, 141, 167], "pyclaw": [20, 24, 27, 38, 40, 62, 86, 87, 88, 89, 90, 91, 92, 93, 94, 96, 97, 98, 100, 103, 104, 105, 106, 108, 109, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 160], "4": [21, 22, 23, 24, 89, 125, 126, 138], "3": [21, 42, 70, 123, 124], "6": [21, 22, 89, 128, 129], "5": [22, 24, 31, 127], "python": [22, 84, 85, 105, 110, 111, 130, 163], "convers": 22, "tool": [22, 27, 47, 53, 64, 116, 158, 163], "x": [23, 24, 89, 138], "link": 23, "fortran": [24, 27, 33, 39, 42, 43, 44, 61, 85, 107, 116, 165, 167], "packag": [24, 62, 97, 102], "input": [24, 34, 36, 97, 148, 149], "paramet": [24, 47, 82, 84, 108, 148, 149, 151], "compon": [25, 82], "commun": [26, 30, 79], "workshop": [26, 79], "clinic": 26, "tutori": [26, 108, 110], "avail": [26, 45], "stream": 26, "upcom": 26, "recent": [26, 30], "develop": [26, 27, 30, 79], "sprint": [26, 79], "session": 26, "previou": [26, 58], "event": [26, 55], "full": 27, "tabl": [27, 96], "overview": [27, 147], "get": [27, 31, 50, 71], "start": [27, 31, 50, 113, 114], "geophys": 27, "flow": [27, 88], "visual": [27, 55], "migrat": 27, "older": 27, "version": [27, 31, 43, 54, 56, 58, 59, 62, 111], "resourc": 27, "contribut": [28, 30, 141], "current_data": [29, 84], "guidelin": 30, "report": 30, "fix": [30, 34, 36, 76, 151], "bug": 30, "instal": [30, 39, 40, 60, 61, 62, 78, 85, 96, 99, 105, 107, 111, 160, 165], "instruct": [30, 62], "clone": [30, 61], "most": 30, "github": [30, 59], "check": [30, 116], "out": [30, 70], "branch": [30, 58], "each": [30, 167], "updat": [30, 58, 59], "latest": 30, "never": 30, "commit": 30, "ad": [30, 55, 93, 101, 140], "fork": 30, "remot": 30, "modifi": [30, 67, 139], "issu": 30, "pull": 30, "request": 30, "test": [30, 39, 40, 99, 105, 116, 160], "top": 30, "level": [30, 144, 151], "git": [30, 54, 58, 61, 85], "workflow": 30, "catch": 30, "error": [30, 107], "pyflak": 30, "pylint": 30, "coverag": 30, "troubl": [30, 71, 165], "shoot": [30, 71], "tip": [30, 43, 53, 55, 99], "docker": 31, "9": [31, 135, 136, 137], "abov": 31, "contain": 31, "restart": [31, 88, 139], "run": [31, 38, 39, 40, 50, 88, 90, 93, 99, 100, 116, 148, 149, 165], "move": [31, 32, 49], "between": [31, 82], "host": 31, "machin": [31, 169], "some": [31, 82, 151, 166], "command": [31, 40, 71, 84, 93, 165], "imag": [31, 55], "dockerfil": [31, 59], "binder": 31, "dtopotool": 32, "modul": [32, 35, 37, 51, 63, 96, 109, 150, 152, 164], "topographi": [32, 42, 50, 55, 70, 151, 162, 164, 166], "auto": [32, 35, 37, 51, 63, 164], "docstr": [32, 35, 37, 51, 63, 164], "77": 33, "v": 33, "90": 33, "monitor": [34, 151], "fgmax": [34, 35, 70], "specif": [34, 36, 108, 116, 151, 158, 167], "differ": [34, 55, 62, 67, 78, 82], "point": [34, 70], "style": [34, 58, 77], "valu": [34, 88], "choic": [34, 36], "interpol": [34, 36, 72], "procedur": [34, 36], "A": [34, 36, 142], "simpl": [34, 36, 142], "process": [34, 81], "output": [34, 36, 66, 70, 71, 73, 76, 77, 88, 97, 98, 116, 139, 148, 149, 151, 165], "format": [34, 36, 77, 162], "fgmax_tool": 35, "fgout": [36, 37, 64], "setplot": [36, 71, 82, 84, 147], "produc": [36, 84], "read": [36, 42, 142], "arrai": [36, 42, 70, 77, 107], "registr": [36, 57], "fgout_tool": 37, "ipython": [40, 93], "interpret": 40, "line": [40, 84, 93, 116, 165], "specifi": [41, 64, 82, 84, 115, 147, 148, 149, 151, 167], "flagregion": 41, "rule": [41, 142], "rectangl": [41, 142], "forc": [42, 151], "dry": [42, 70, 151], "sampl": [42, 70, 150, 152], "1": [42, 70, 119, 121, 124, 126, 129, 131, 133, 136], "arcsecond": [42, 70], "dem": [42, 70], "force_dry_init": 42, "usag": 42, "intern": 42, "modif": 42, "compil": [44, 66, 107, 155, 165], "fc": [44, 146], "environ": [44, 146], "variabl": [44, 66, 101, 146], "fflag": 44, "lflag": 44, "pre": 44, "processor": 44, "ppflag": 44, "gfortran": [44, 105], "intel": 44, "book": 45, "fvmhp": 45, "youtub": 45, "video": 45, "galleri": [46, 58, 71], "locat": 47, "coordin": [49, 53, 55], "system": [49, 85], "uniform": 49, "map": [49, 55], "topograpi": 49, "data": [49, 55, 77, 147, 151, 159, 162, 164, 165, 166, 167], "dtopo": [49, 163], "set": [50, 71, 82, 84, 101, 143, 144, 146, 165], "up": [50, 101], "new": [50, 58, 74, 93, 116], "util": [51, 63, 109], "cautionari": 52, "hint": [52, 82, 110], "tsunami": [52, 55, 114, 166], "hazard": 52, "model": [52, 75, 113, 114, 166], "water": [53, 102, 141, 154], "depth": 53, "surfac": [53, 144], "elev": [53, 70, 144], "latitud": [53, 55], "longitud": [53, 55], "ax": 53, "keep": 54, "track": [54, 64], "googl": 55, "earth": 55, "basic": [55, 87, 100], "requir": [55, 167], "option": [55, 61, 84, 99, 101], "gdal": 55, "librari": [55, 67], "chile": 55, "2010": [55, 79], "need": 55, "plotdata": 55, "plotfigur": 55, "figur": [55, 82], "plotax": 55, "plotitem": 55, "overlai": 55, "addit": [55, 149, 151], "kml": 55, "kmz": 55, "tile": 55, "faster": 55, "load": 55, "remov": 55, "alias": 55, "artifact": 55, "multipl": 55, "resolut": [55, 170], "publish": 55, "gpu": 56, "netcdf": [57, 73, 77, 97, 162], "tag": 58, "configur": 58, "doc": 58, "releas": [58, 59, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138], "To": 58, "major": 58, "extra": 58, "built": [58, 93], "sphinx": [58, 155], "page": 58, "do": 59, "prepar": 59, "number": 59, "candid": 59, "tar": [59, 61], "final": 59, "pypi": 59, "zenodo": 59, "open": 59, "scienc": 59, "framework": 59, "osf": 59, "app": 59, "next": [60, 61, 62, 105], "step": [60, 61, 62, 105, 167], "pip": [62, 85, 165], "quick": [62, 113, 114], "experi": 62, "directori": [62, 66, 74, 82], "troubleshoot": [62, 107, 165], "kmltool": 63, "lagrangian": 64, "particl": 64, "altern": 64, "duplic": 66, "base": 66, "sourc": [66, 75, 101, 154, 159, 166, 167, 170], "name": [66, 67], "replac": 67, "same": 67, "man": 68, "friction": 68, "term": [68, 101, 154, 167, 170], "mapc2p": 69, "march": 70, "front": 70, "argument": 70, "mask": 70, "topofil": 70, "region": [70, 115, 142, 151], "previous_pts_chosen": 70, "below": 70, "given": 70, "buffer": 70, "zone": 70, "along": 70, "shore": 70, "onli": 70, "write": [70, 101, 116, 142], "indic": [70, 96], "determin": 70, "area": 70, "mhw": 70, "matlab": 71, "search": 71, "path": [71, 111], "plotclaw": 71, "afterfram": 71, "help": 71, "found": 71, "maxfram": 71, "nearshor": 72, "copi": 74, "exist": 74, "earthquak": [75, 166], "fault": 75, "slip": 75, "okada": 75, "rectangular": 75, "subfault": 75, "kinemat": 75, "ruptur": 75, "triangular": 75, "openmp": 76, "sytl": 77, "ascii": [77, 97], "fort": [77, 82], "t0002": 77, "q0002": 77, "raw": 77, "binari": [77, 97], "aux": [77, 88], "which": [78, 111], "should": 78, "i": [78, 98], "interfac": 78, "parallel": [78, 94, 99, 100, 106], "comput": [78, 139], "photo": 79, "2016": 79, "univers": 79, "washington": 79, "2015": 79, "utah": 79, "2014": 79, "hpc3": 79, "kaust": 79, "2013": 79, "claw": [79, 146], "dev": 79, "uw": 79, "2012": 79, "2011": 79, "hack": 79, "post": 81, "fly": 81, "faq": 82, "what": [82, 84, 98, 141], "": [82, 93, 104, 141, 170], "make": [82, 99, 153, 165], "how": [82, 84, 98], "someth": 82, "than": 82, "q": 82, "add": 82, "anoth": 82, "curv": 82, "e": 82, "g": 82, "true": 82, "solut": [82, 88, 103], "titl": 82, "outdir": 82, "item": 82, "provid": 82, "size": 82, "background": 82, "color": 82, "colormap": 82, "pcolor": 82, "contourf": 82, "debug": [82, 149], "latex": 84, "interact": [84, 93], "iplotclaw": 84, "access": 84, "printfram": 84, "oper": 85, "contributor": 86, "understand": 88, "class": [88, 91, 158], "simul": 88, "creation": 88, "control": [88, 91, 108], "deriv": [88, 98], "quantiti": [88, 98], "port": 89, "cloud": 90, "sage": 90, "math": 90, "limit": 92, "tvd": 92, "cfl": 92, "independ": 92, "depend": [92, 105], "geometri": 94, "serial": [94, 106, 116], "object": [94, 147], "domain": [94, 108], "patch": 94, "petclaw": [94, 106], "go": 95, "further": 95, "featur": 96, "fileio": 97, "hdf5": 97, "frame": 98, "when": 98, "save": [98, 153], "written": 98, "where": 98, "petsc": 99, "correctli": 99, "pass": 99, "script": 101, "auxiliari": 101, "acoust": [102, 108], "advect": 102, "burger": 102, "euler": 102, "shallow": [102, 141, 154], "sharpclaw": 104, "custom": [104, 140], "bc": 104, "signatur": 104, "numpi": 105, "matplotlib": 105, "obtain": 105, "nose": 105, "state": 106, "order": 107, "solv": 108, "drop": 110, "support": [110, 130], "2": [110, 120, 121, 122, 134, 137], "7": [110, 130, 131], "whichclaw": 111, "wa": 111, "import": 111, "sy": 111, "easi": 111, "pth": 111, "pythonpath": [111, 146], "qinit": [112, 151, 162], "storm": [113, 151, 158, 159], "surg": [113, 159], "criteria": 115, "flag2refin": 115, "richardson": 115, "extrapol": 115, "implement": 115, "regress": 116, "travi": 116, "continu": 116, "integr": 116, "diff": 116, "chardiff": 116, "comparison": 116, "imagediff": 116, "pixel": 116, "simultan": 116, "doctest": 116, "note": [117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138], "global": 125, "8": [132, 133, 134], "checkpoint": 139, "after": 139, "dimension": 140, "pointwis": 140, "f": [140, 170], "layer": 141, "potenti": 141, "miss": 141, "demonstr": 141, "roe": 141, "hll": 141, "relat": 142, "convex": 142, "polygon": 142, "d": 142, "slu": 142, "bounding_box": 142, "mask_outsid": 142, "instanti": 142, "make_kml": 142, "cover": 142, "select": 142, "continent": 142, "shelf": 142, "sea_level": 143, "eta": 144, "init": 144, "spatial": [144, 167], "vari": [144, 167], "behavior": 144, "adjust": [144, 151], "sea": [144, 151], "seismic": 144, "deform": 144, "case": 144, "setaux": [145, 167], "desir": 147, "time": [148, 149, 151, 161, 167], "print": 149, "geo": 151, "fixedgrid": 151, "maximum": 151, "arriv": 151, "share": 153, "local": 155, "src1d": [156, 167], "src": [157, 167], "statist": 161, "download": 162, "displac": 162, "topo": 163, "topotool": 164, "f2py": 165, "ex": 165, "bathymetri": 166, "dart": 166, "buoi": 166, "tide": 166, "done": 167, "befor": 167, "visit": 168, "virtual": 169, "propag": 170, "godunov": 170, "high": 170, "formul": 170, "capac": 170}, "envversion": {"sphinx.domains.c": 2, "sphinx.domains.changeset": 1, "sphinx.domains.citation": 1, "sphinx.domains.cpp": 8, "sphinx.domains.index": 1, "sphinx.domains.javascript": 2, "sphinx.domains.math": 2, "sphinx.domains.python": 3, "sphinx.domains.rst": 2, "sphinx.domains.std": 2, "sphinx": 57}, "alltitles": {"ClawPlotAxes": [[0, "clawplotaxes"]], "Attributes": [[0, "attributes"], [1, "attributes"], [2, "attributes"], [3, "attributes"]], "Attributes for gauge plots": [[0, "attributes-for-gauge-plots"]], "Methods": [[0, "methods"], [1, "methods"], [2, "methods"], [3, "methods"]], "ClawPlotData": [[1, "clawplotdata"]], "ClawPlotFigure": [[2, "clawplotfigure"]], "ClawPlotItem": [[3, "clawplotitem"]], "Special attributes for all 1d plots,  plot_type = \u20181d\u2026\u2019": [[3, "special-attributes-for-all-1d-plots-plot-type-1d"]], "Special attributes for plot_type = \u20181d_plot\u2019": [[3, "special-attributes-for-plot-type-1d-plot"]], "Special attributes for plot_type = \u20181d_fill_between\u2019": [[3, "special-attributes-for-plot-type-1d-fill-between"]], "Special attributes for plot_type = \u20181d_from_2d_data\u2019": [[3, "special-attributes-for-plot-type-1d-from-2d-data"]], "Special attributes for all 2d plots,  plot_type = \u20182d\u2026\u2019": [[3, "special-attributes-for-all-2d-plots-plot-type-2d"]], "Special attributes for plot_type = \u20182d_contour\u2019": [[3, "special-attributes-for-plot-type-2d-contour"]], "Special attributes for plot_type = \u20182d_pcolor\u2019": [[3, "special-attributes-for-plot-type-2d-pcolor"]], "Special attributes for plot_type = \u20182d_imshow\u2019": [[3, "special-attributes-for-plot-type-2d-imshow"]], "Special attributes for plot_type = \u20182d_hillshade\u2019": [[3, "special-attributes-for-plot-type-2d-hillshade"]], "AMR Attributes": [[3, "amr-attributes"]], "Colorbar attributes": [[3, "colorbar-attributes"]], "About this software": [[4, "about-this-software"]], "License": [[4, "license"], [65, "license"], [86, "license"]], "Authors": [[4, "authors"]], "Citing this work": [[4, "citing-this-work"]], "Funding": [[4, "funding"], [86, "funding"]], "Guiding AMR with adjoint flagging": [[5, "guiding-amr-with-adjoint-flagging"]], "Using adjoint flagging in GeoClaw": [[5, "using-adjoint-flagging-in-geoclaw"]], "Adaptive mesh refinement (AMR) algorithms": [[6, "adaptive-mesh-refinement-amr-algorithms"]], "Ghost cells and boundary conditions for AMR": [[6, "ghost-cells-and-boundary-conditions-for-amr"]], "Choosing and initializing finer grids": [[6, "choosing-and-initializing-finer-grids"]], "Flagging cells for refinement": [[6, "flagging-cells-for-refinement"]], "For more details": [[6, "for-more-details"]], "AMRClaw Description and Detailed Contents": [[7, "amrclaw-description-and-detailed-contents"]], "AMRClaw for 1d problems": [[8, "amrclaw-for-1d-problems"]], "Old approach, deprecated:": [[8, "old-approach-deprecated"]], "Doxygen documentation of AMRClaw": [[9, "doxygen-documentation-of-amrclaw"]], "AMRClaw Flowcharts": [[10, "amrclaw-flowcharts"]], "Application documentation": [[11, "application-documentation"]], "Converting README.rst to README.html": [[11, "converting-readme-rst-to-readme-html"]], "Converting code to html with clawcode2html": [[11, "converting-code-to-html-with-clawcode2html"]], "Clawpack Applications repository": [[12, "clawpack-applications-repository"]], "Jupyter Notebooks": [[12, "jupyter-notebooks"]], "Submodules": [[12, "submodules"]], "Examples included with Clawpack": [[12, "examples-included-with-clawpack"]], "Amazon Web Services EC2 Clawpack AMI": [[13, "amazon-web-services-ec2-clawpack-ami"]], "Finding the Clawpack AMI": [[13, "finding-the-clawpack-ami"]], "Launching an instance": [[13, "launching-an-instance"]], "Logging on to your instance": [[13, "logging-on-to-your-instance"]], "Using Clawpack": [[13, "using-clawpack"]], "Viewing plots of results": [[13, "viewing-plots-of-results"]], "Viewing webpages directly from your instance": [[13, "viewing-webpages-directly-from-your-instance"]], "Transferring files to/from your instance": [[13, "transferring-files-to-from-your-instance"]], "Stopping your instance": [[13, "stopping-your-instance"]], "Creating your own AMI": [[13, "creating-your-own-ami"]], "b4run function": [[14, "b4run-function"]], "b4step default routines": [[15, "b4step-default-routines"]], "b4step routine in GeoClaw": [[15, "b4step-routine-in-geoclaw"]], "Boundary conditions": [[16, "boundary-conditions"], [170, "boundary-conditions"]], "Boundary conditions for adaptive refinement": [[16, "boundary-conditions-for-adaptive-refinement"]], "Boundary conditions for GeoClaw": [[16, "boundary-conditions-for-geoclaw"]], "Boundary conditions for clamshell grids on the sphere": [[16, "boundary-conditions-for-clamshell-grids-on-the-sphere"]], "User-defined boundary conditions": [[16, "user-defined-boundary-conditions"]], "Bibliography": [[17, "bibliography"]], "Papers describing the Clawpack software and algorithms": [[17, "papers-describing-the-clawpack-software-and-algorithms"]], "Papers describing applications": [[17, "papers-describing-applications"]], "Other references": [[17, "other-references"]], "Boussinesq solvers in One Space Dimension": [[18, "boussinesq-solvers-in-one-space-dimension"]], "Using the 1d Boussinesq code": [[18, "using-the-1d-boussinesq-code"]], "Makefile": [[18, "makefile"], [19, "makefile"]], "setrun.py": [[18, "setrun-py"], [19, "setrun-py"]], "Boussinesq solvers in Two Space Dimensions": [[19, "boussinesq-solvers-in-two-space-dimensions"]], "Boussinesq-type dispersive equations": [[19, "boussinesq-type-dispersive-equations"]], "The SGN equations": [[19, "the-sgn-equations"]], "The Madsen-Sorensen (MS) equations": [[19, "the-madsen-sorensen-ms-equations"]], "Using the 2d Boussinesq code": [[19, "using-the-2d-boussinesq-code"]], "Prerequisites for the 2d Boussinesq code": [[19, "prerequisites-for-the-2d-boussinesq-code"]], "Wave breaking and switching to SWE": [[19, "wave-breaking-and-switching-to-swe"]], "Examples": [[19, "examples"], [42, "examples"], [47, "examples"], [70, "examples"], [96, "examples"], [142, "examples"]], "Changes to master since v5.10.0": [[20, "changes-to-master-since-v5-10-0"]], "Changes that are not backward compatible": [[20, "changes-that-are-not-backward-compatible"], [118, "changes-that-are-not-backward-compatible"], [127, "changes-that-are-not-backward-compatible"], [128, "changes-that-are-not-backward-compatible"], [129, "changes-that-are-not-backward-compatible"], [130, "changes-that-are-not-backward-compatible"], [131, "changes-that-are-not-backward-compatible"], [132, "changes-that-are-not-backward-compatible"], [133, "changes-that-are-not-backward-compatible"], [134, "changes-that-are-not-backward-compatible"], [135, "changes-that-are-not-backward-compatible"]], "General changes": [[20, "general-changes"], [127, "general-changes"], [128, "general-changes"], [129, "general-changes"], [130, "general-changes"], [131, "general-changes"], [132, "general-changes"], [133, "general-changes"], [134, "general-changes"], [135, "general-changes"], [137, "general-changes"]], "Changes to classic": [[20, "changes-to-classic"], [118, "changes-to-classic"], [119, "changes-to-classic"], [120, "changes-to-classic"], [121, "changes-to-classic"], [122, "changes-to-classic"], [123, "changes-to-classic"], [124, "changes-to-classic"], [125, "changes-to-classic"], [126, "changes-to-classic"], [127, "changes-to-classic"], [128, "changes-to-classic"], [129, "changes-to-classic"], [130, "changes-to-classic"], [131, "changes-to-classic"], [132, "changes-to-classic"], [133, "changes-to-classic"], [134, "changes-to-classic"], [135, "changes-to-classic"], [136, "changes-to-classic"], [137, "changes-to-classic"]], "Changes to clawutil": [[20, "changes-to-clawutil"], [118, "changes-to-clawutil"], [119, "changes-to-clawutil"], [120, "changes-to-clawutil"], [121, "changes-to-clawutil"], [122, "changes-to-clawutil"], [123, "changes-to-clawutil"], [124, "changes-to-clawutil"], [125, "changes-to-clawutil"], [126, "changes-to-clawutil"], [127, "changes-to-clawutil"], [128, "changes-to-clawutil"], [129, "changes-to-clawutil"], [130, "changes-to-clawutil"], [131, "changes-to-clawutil"], [132, "changes-to-clawutil"], [133, "changes-to-clawutil"], [134, "changes-to-clawutil"], [135, "changes-to-clawutil"], [136, "changes-to-clawutil"], [137, "changes-to-clawutil"]], "Changes to visclaw": [[20, "changes-to-visclaw"], [118, "changes-to-visclaw"], [119, "changes-to-visclaw"], [120, "changes-to-visclaw"], [121, "changes-to-visclaw"], [122, "changes-to-visclaw"], [123, "changes-to-visclaw"], [124, "changes-to-visclaw"], [125, "changes-to-visclaw"], [126, "changes-to-visclaw"], [127, "changes-to-visclaw"], [128, "changes-to-visclaw"], [129, "changes-to-visclaw"], [130, "changes-to-visclaw"], [131, "changes-to-visclaw"], [132, "changes-to-visclaw"], [133, "changes-to-visclaw"], [134, "changes-to-visclaw"], [135, "changes-to-visclaw"], [136, "changes-to-visclaw"], [137, "changes-to-visclaw"]], "Changes to riemann": [[20, "changes-to-riemann"], [118, "changes-to-riemann"], [119, "changes-to-riemann"], [120, "changes-to-riemann"], [121, "changes-to-riemann"], [122, "changes-to-riemann"], [123, "changes-to-riemann"], [124, "changes-to-riemann"], [125, "changes-to-riemann"], [126, "changes-to-riemann"], [127, "changes-to-riemann"], [128, "changes-to-riemann"], [129, "changes-to-riemann"], [130, "changes-to-riemann"], [131, "changes-to-riemann"], [132, "changes-to-riemann"], [133, "changes-to-riemann"], [134, "changes-to-riemann"], [135, "changes-to-riemann"], [136, "changes-to-riemann"], [137, "changes-to-riemann"]], "Changes to amrclaw": [[20, "changes-to-amrclaw"], [118, "changes-to-amrclaw"], [119, "changes-to-amrclaw"], [120, "changes-to-amrclaw"], [121, "changes-to-amrclaw"], [122, "changes-to-amrclaw"], [123, "changes-to-amrclaw"], [124, "changes-to-amrclaw"], [125, "changes-to-amrclaw"], [126, "changes-to-amrclaw"], [127, "changes-to-amrclaw"], [128, "changes-to-amrclaw"], [129, "changes-to-amrclaw"], [130, "changes-to-amrclaw"], [131, "changes-to-amrclaw"], [132, "changes-to-amrclaw"], [133, "changes-to-amrclaw"], [134, "changes-to-amrclaw"], [135, "changes-to-amrclaw"], [136, "changes-to-amrclaw"], [137, "changes-to-amrclaw"]], "Changes to geoclaw": [[20, "changes-to-geoclaw"], [118, "changes-to-geoclaw"], [119, "changes-to-geoclaw"], [120, "changes-to-geoclaw"], [121, "changes-to-geoclaw"], [122, "changes-to-geoclaw"], [123, "changes-to-geoclaw"], [124, "changes-to-geoclaw"], [125, "changes-to-geoclaw"], [126, "changes-to-geoclaw"], [127, "changes-to-geoclaw"], [128, "changes-to-geoclaw"], [129, "changes-to-geoclaw"], [130, "changes-to-geoclaw"], [131, "changes-to-geoclaw"], [132, "changes-to-geoclaw"], [133, "changes-to-geoclaw"], [134, "changes-to-geoclaw"], [135, "changes-to-geoclaw"], [136, "changes-to-geoclaw"], [137, "changes-to-geoclaw"]], "Changes to PyClaw": [[20, "changes-to-pyclaw"], [117, "changes-to-pyclaw"], [118, "changes-to-pyclaw"], [119, "changes-to-pyclaw"], [120, "changes-to-pyclaw"], [121, "changes-to-pyclaw"], [122, "changes-to-pyclaw"], [123, "changes-to-pyclaw"], [124, "changes-to-pyclaw"], [125, "changes-to-pyclaw"], [126, "changes-to-pyclaw"], [127, "changes-to-pyclaw"], [128, "changes-to-pyclaw"], [129, "changes-to-pyclaw"], [130, "changes-to-pyclaw"], [131, "changes-to-pyclaw"], [132, "changes-to-pyclaw"], [133, "changes-to-pyclaw"], [134, "changes-to-pyclaw"], [135, "changes-to-pyclaw"], [136, "changes-to-pyclaw"], [137, "changes-to-pyclaw"]], "Other Clawpack Repositories": [[20, "other-clawpack-repositories"], [118, "other-clawpack-repositories"], [126, "other-clawpack-repositories"], [127, "other-clawpack-repositories"], [128, "other-clawpack-repositories"], [129, "other-clawpack-repositories"], [130, "other-clawpack-repositories"], [131, "other-clawpack-repositories"], [132, "other-clawpack-repositories"], [133, "other-clawpack-repositories"], [134, "other-clawpack-repositories"], [135, "other-clawpack-repositories"], [136, "other-clawpack-repositories"], [137, "other-clawpack-repositories"]], "Converting from Clawpack 4.3 to 4.6": [[21, "converting-from-clawpack-4-3-to-4-6"]], "Converting from Clawpack 4.6 to 5.0": [[22, "converting-from-clawpack-4-6-to-5-0"]], "Python conversion tool": [[22, "python-conversion-tool"]], "Clawpack 4.x links": [[23, "clawpack-4-x-links"]], "Changes in Clawpack 5.0": [[24, "changes-in-clawpack-5-0"]], "PyClaw in 5.0": [[24, "pyclaw-in-5-0"]], "Fortran package changes": [[24, "fortran-package-changes"]], "Changes to input parameters in setrun.py from 4.x to 5.0": [[24, "changes-to-input-parameters-in-setrun-py-from-4-x-to-5-0"]], "Changes to general parameters": [[24, "changes-to-general-parameters"]], "Changes to AMR parameters": [[24, "changes-to-amr-parameters"]], "Changes to GeoClaw parameters": [[24, "changes-to-geoclaw-parameters"]], "Changes to plotting routines": [[24, "changes-to-plotting-routines"]], "Clawpack components": [[25, "clawpack-components"]], "Other repositories": [[25, "other-repositories"]], "Clawpack Community": [[26, "clawpack-community"]], "User Workshops, Clinics, and Tutorials": [[26, "user-workshops-clinics-and-tutorials"]], "Available for streaming": [[26, "available-for-streaming"]], "Upcoming": [[26, "upcoming"], [26, "id1"]], "Recent": [[26, "recent"]], "Developer Workshops and Sprint Sessions": [[26, "developer-workshops-and-sprint-sessions"]], "Previous": [[26, "previous"]], "Other Clawpack events": [[26, "other-clawpack-events"]], "Contents": [[27, "id1"], [30, "contents"], [42, "contents"], [70, "contents"], [82, "contents"], [88, "contents"], [98, "contents"], [104, "contents"], [116, "contents"], [142, "contents"]], "Full Table of Contents": [[27, "full-table-of-contents"]], "Overview and Getting Started": [[27, "overview-and-getting-started"]], "Examples and Applications": [[27, "examples-and-applications"]], "Classic, AMRClaw, and GeoClaw": [[27, "classic-amrclaw-and-geoclaw"]], "Using the Fortran codes": [[27, "using-the-fortran-codes"]], "AMRClaw: adaptive mesh refinement": [[27, "amrclaw-adaptive-mesh-refinement"]], "GeoClaw: geophysical flows": [[27, "geoclaw-geophysical-flows"]], "PyClaw": [[27, "pyclaw"], [38, "pyclaw"], [96, "pyclaw"], [116, "pyclaw"], [160, "pyclaw"]], "Riemann": [[27, "riemann"]], "VisClaw: Plotting and Visualization Tools": [[27, "visclaw-plotting-and-visualization-tools"]], "Migrating applications from older versions of Clawpack": [[27, "migrating-applications-from-older-versions-of-clawpack"]], "Developers\u2019 resources": [[27, "developers-resources"]], "References": [[27, "references"], [56, "references"]], "Contributing examples and applications": [[28, "contributing-examples-and-applications"]], "current_data": [[29, "current-data"]], "Attributes of current_data:": [[29, "attributes-of-current-data"]], "Developers\u2019 Guide": [[30, "developers-guide"]], "Guidelines for contributing": [[30, "guidelines-for-contributing"]], "Reporting and fixing bugs": [[30, "reporting-and-fixing-bugs"]], "Developer communication": [[30, "developer-communication"]], "Installation instructions for developers": [[30, "installation-instructions-for-developers"]], "Cloning the most recent code from Github": [[30, "cloning-the-most-recent-code-from-github"]], "Checking out the master branch on each repository": [[30, "checking-out-the-master-branch-on-each-repository"]], "Updating to the latest master branch": [[30, "updating-to-the-latest-master-branch"]], "Never commit to master": [[30, "never-commit-to-master"]], "Adding your fork as a remote": [[30, "adding-your-fork-as-a-remote"]], "Modifying code": [[30, "modifying-code"]], "Issuing a pull request": [[30, "issuing-a-pull-request"]], "Testing a pull request": [[30, "testing-a-pull-request"]], "Top-level pull requests": [[30, "top-level-pull-requests"]], "Git workflow": [[30, "git-workflow"]], "Catching errors with Pyflakes and Pylint": [[30, "catching-errors-with-pyflakes-and-pylint"]], "Checking test coverage": [[30, "checking-test-coverage"]], "Trouble-Shooting Tips": [[30, "trouble-shooting-tips"]], "Docker for Clawpack": [[31, "docker-for-clawpack"]], "Using Version 5.9.0 or above": [[31, "using-version-5-9-0-or-above"]], "Getting started": [[31, "getting-started"]], "Stopping a container": [[31, "stopping-a-container"]], "Restarting a container": [[31, "restarting-a-container"]], "Running Jupyter notebooks": [[31, "running-jupyter-notebooks"]], "Moving files between the docker container and the host machine": [[31, "moving-files-between-the-docker-container-and-the-host-machine"]], "Some other useful docker commands": [[31, "some-other-useful-docker-commands"]], "Creating your own docker image": [[31, "creating-your-own-docker-image"]], "Dockerfiles for binder": [[31, "dockerfiles-for-binder"]], "dtopotools module for moving topography": [[32, "dtopotools-module-for-moving-topography"]], "Documentation auto-generated from the module docstrings": [[32, "module-clawpack.geoclaw.dtopotools"], [35, "module-clawpack.geoclaw.fgmax_tools"], [37, "module-clawpack.geoclaw.fgout_tools"], [51, "module-clawpack.geoclaw.util"], [63, "module-clawpack.geoclaw.kmltools"], [164, "module-clawpack.geoclaw.topotools"]], "Fortran 77 vs. Fortran 90 files": [[33, "fortran-77-vs-fortran-90-files"]], "Fixed grid monitoring (fgmax)": [[34, "fixed-grid-monitoring-fgmax"]], "Input file specification": [[34, "input-file-specification"], [36, "input-file-specification"]], "Different point styles": [[34, "different-point-styles"]], "Other attributes": [[34, "other-attributes"]], "Values to monitor": [[34, "values-to-monitor"]], "Choice of interpolation procedure": [[34, "choice-of-interpolation-procedure"], [36, "choice-of-interpolation-procedure"]], "A simple example": [[34, "a-simple-example"], [36, "a-simple-example"]], "Processing and plotting fgmax output": [[34, "processing-and-plotting-fgmax-output"]], "Format of the output files": [[34, "format-of-the-output-files"]], "fgmax examples": [[34, "fgmax-examples"]], "fgmax_tools module for working with fgmax grids": [[35, "fgmax-tools-module-for-working-with-fgmax-grids"]], "Fixed grid output (fgout)": [[36, "fixed-grid-output-fgout"]], "Format of fgout output": [[36, "format-of-fgout-output"]], "Using setplot.py to produce plots": [[36, "using-setplot-py-to-produce-plots"]], "Reading and plotting fgout arrays directly": [[36, "reading-and-plotting-fgout-arrays-directly"]], "fgout grid registration": [[36, "fgout-grid-registration"]], "fgout examples": [[36, "fgout-examples"]], "fgout_tools module for working with fgout grids": [[37, "fgout-tools-module-for-working-with-fgout-grids"]], "Running an example": [[38, "running-an-example"], [39, "running-an-example"], [40, "running-an-example"]], "Classic": [[38, "classic"], [39, "classic"], [160, "classic"]], "Testing your Fortran installation and running an example": [[39, "testing-your-fortran-installation-and-running-an-example"]], "More examples": [[39, "more-examples"]], "Testing a PyClaw installation and running an example": [[40, "testing-a-pyclaw-installation-and-running-an-example"]], "From the Jupyter notebook": [[40, "from-the-jupyter-notebook"]], "From the IPython interpreter": [[40, "from-the-ipython-interpreter"]], "From the command line": [[40, "from-the-command-line"], [93, "from-the-command-line"]], "Specifying flagregions for adaptive refinement": [[41, "specifying-flagregions-for-adaptive-refinement"]], "Using ruled rectangles as flagregions": [[41, "using-ruled-rectangles-as-flagregions"]], "Force Cells to be Dry Initially": [[42, "force-cells-to-be-dry-initially"]], "Sample topography from a 1/3 arcsecond DEM": [[42, "sample-topography-from-a-1-3-arcsecond-dem"], [70, "sample-topography-from-a-1-3-arcsecond-dem"]], "Creating the force_dry_init array": [[42, "creating-the-force-dry-init-array"]], "Create file to read into GeoClaw": [[42, "create-file-to-read-into-geoclaw"]], "Usage in GeoClaw Fortran code": [[42, "usage-in-geoclaw-fortran-code"]], "Internal GeoClaw modifications": [[42, "internal-geoclaw-modifications"]], "Fortran version": [[43, "fortran-version"]], "Makefiles": [[43, "makefiles"]], "More tips": [[43, "more-tips"]], "Fortran Compilers": [[44, "fortran-compilers"]], "FC environment variable": [[44, "fc-environment-variable"]], "FFLAGS environment variable": [[44, "fflags-environment-variable"]], "LFLAGS environment variable": [[44, "lflags-environment-variable"]], "Pre-Processor and the PPFLAGS environment variable": [[44, "pre-processor-and-the-ppflags-environment-variable"]], "gfortran compiler": [[44, "gfortran-compiler"]], "Intel fortran compiler": [[44, "intel-fortran-compiler"]], "Examples from the book FVMHP": [[45, "examples-from-the-book-fvmhp"]], "Available examples": [[45, "available-examples"]], "YouTube Videos": [[45, "youtube-videos"]], "Clawpack Gallery": [[46, "clawpack-gallery"]], "Gauges": [[47, "gauges"]], "Gauge parameters in setrun": [[47, "gauge-parameters-in-setrun"]], "Plotting tools": [[47, "plotting-tools"]], "Plotting gauge locations": [[47, "plotting-gauge-locations"]], "GeoClaw Description and Detailed Contents": [[48, "geoclaw-description-and-detailed-contents"]], "GeoClaw in One Space Dimension": [[49, "geoclaw-in-one-space-dimension"]], "Coordinate systems": [[49, "coordinate-systems"]], "Uniform and mapped grids": [[49, "uniform-and-mapped-grids"]], "Topograpy data": [[49, "topograpy-data"]], "Moving topograpy (dtopo) data": [[49, "moving-topograpy-dtopo-data"]], "Getting started with GeoClaw": [[50, "getting-started-with-geoclaw"]], "Running a GeoClaw code": [[50, "running-a-geoclaw-code"]], "Topography": [[50, "topography"]], "Plotting GeoClaw results": [[50, "plotting-geoclaw-results"]], "Setting up a new example": [[50, "setting-up-a-new-example"]], "geoclaw.util module of utility functions": [[51, "geoclaw-util-module-of-utility-functions"]], "Cautionary Hints on using GeoClaw": [[52, "cautionary-hints-on-using-geoclaw"]], "Tsunami hazard modeling": [[52, "tsunami-hazard-modeling"]], "GeoClaw plotting tools": [[53, "geoclaw-plotting-tools"]], "Plotting water depth or surface elevation": [[53, "plotting-water-depth-or-surface-elevation"]], "Tips on latitude-longitude coordinate axes": [[53, "tips-on-latitude-longitude-coordinate-axes"]], "Keeping track of repository versions with Git": [[54, "keeping-track-of-repository-versions-with-git"]], "Visualizing GeoClaw results in Google Earth": [[55, "visualizing-geoclaw-results-in-google-earth"]], "Basic requirements": [[55, "basic-requirements"]], "Optional GDAL library": [[55, "optional-gdal-library"]], "An example : The Chile 2010 tsunami event": [[55, "an-example-the-chile-2010-tsunami-event"]], "Plotting attributes needed for Google Earth": [[55, "plotting-attributes-needed-for-google-earth"]], "plotdata attributes": [[55, "plotdata-attributes"]], "plotfigure attributes": [[55, "plotfigure-attributes"]], "Creating the figures": [[55, "creating-the-figures"]], "plotaxes attributes": [[55, "plotaxes-attributes"]], "plotitem attributes": [[55, "plotitem-attributes"]], "Adding a colorbar overlay": [[55, "adding-a-colorbar-overlay"]], "Gauge plots": [[55, "gauge-plots"]], "Additional plotdata attributes": [[55, "additional-plotdata-attributes"]], "Plotting tips": [[55, "plotting-tips"]], "KML and KMZ files": [[55, "kml-and-kmz-files"]], "Tiling images for faster loading": [[55, "tiling-images-for-faster-loading"]], "Removing aliasing artifacts": [[55, "removing-aliasing-artifacts"]], "Creating multiple figures at different resolutions": [[55, "creating-multiple-figures-at-different-resolutions"]], "Mapping topography data to latitude/longitude coordinates": [[55, "mapping-topography-data-to-latitude-longitude-coordinates"]], "Publishing your results": [[55, "id1"]], "Using the GPU version of Clawpack": [[56, "using-the-gpu-version-of-clawpack"]], "Grid registration": [[57, "grid-registration"]], "NetCDF files": [[57, "netcdf-files"]], "Guide for updating this documentation": [[58, "guide-for-updating-this-documentation"]], "Git branches and tags": [[58, "git-branches-and-tags"]], "Configuration and style files": [[58, "configuration-and-style-files"]], "Updating the docs for a new release": [[58, "updating-the-docs-for-a-new-release"]], "To generate docs including previous versions": [[58, "to-generate-docs-including-previous-versions"]], "Updating for a new major version": [[58, "updating-for-a-new-major-version"]], "Updating the gallery": [[58, "updating-the-gallery"]], "Updating the webpages": [[58, "updating-the-webpages"]], "Extra files for webpages not built by Sphinx": [[58, "extra-files-for-webpages-not-built-by-sphinx"]], "Pages from other clawpack repositories": [[58, "pages-from-other-clawpack-repositories"]], "Guide for doing a Clawpack release": [[59, "guide-for-doing-a-clawpack-release"]], "Preparation": [[59, "preparation"]], "Version numbers": [[59, "version-numbers"]], "Release candidates": [[59, "release-candidates"]], "Create a tar file and a Github release": [[59, "create-a-tar-file-and-a-github-release"]], "Final release": [[59, "final-release"]], "Pypi": [[59, "pypi"]], "Zenodo": [[59, "zenodo"]], "Open Science Framework (OSF)": [[59, "open-science-framework-osf"]], "Updating the documentation": [[59, "updating-the-documentation"]], "Updating the apps repository": [[59, "updating-the-apps-repository"]], "Updating the Dockerfile": [[59, "updating-the-dockerfile"]], "Installing Clawpack": [[60, "installing-clawpack"]], "Next steps:": [[60, "next-steps"], [61, "next-steps"], [62, "next-steps"]], "Options for installing Clawpack Fortran codes": [[61, "options-for-installing-clawpack-fortran-codes"]], "tar file": [[61, "tar-file"]], "git clone": [[61, "git-clone"]], "pip install instructions": [[62, "pip-install-instructions"]], "Quick Installation of PyClaw with pip": [[62, "quick-installation-of-pyclaw-with-pip"]], "Quick Installation of all packages with pip": [[62, "quick-installation-of-all-packages-with-pip"]], "Using pip to install a different version": [[62, "using-pip-to-install-a-different-version"]], "Experimenting with code in the examples directories": [[62, "experimenting-with-code-in-the-examples-directories"]], "Troubleshooting pip install": [[62, "troubleshooting-pip-install"]], "kmltools module of utility functions": [[63, "kmltools-module-of-utility-functions"]], "Lagrangian gauges for particle tracking": [[64, "lagrangian-gauges-for-particle-tracking"]], "Specifying Lagrangian Gauges": [[64, "specifying-lagrangian-gauges"]], "Visclaw tools for plotting": [[64, "visclaw-tools-for-plotting"]], "An alternative using fgout grids": [[64, "an-alternative-using-fgout-grids"]], "Clawpack Makefiles": [[66, "clawpack-makefiles"]], "Applications directory Makefiles": [[66, "applications-directory-makefiles"]], "output": [[66, "output"]], "plots": [[66, "plots"]], "Variables": [[66, "variables"]], "Compiler flags": [[66, "compiler-flags"]], "Duplicate Base Source Name": [[66, "duplicate-base-source-name"]], "Library routines in Makefiles": [[67, "library-routines-in-makefiles"]], "Replacing files with the same name as library files": [[67, "replacing-files-with-the-same-name-as-library-files"]], "Using a modified library routine with a different name": [[67, "using-a-modified-library-routine-with-a-different-name"]], "Manning friction term": [[68, "manning-friction-term"]], "The mapc2p function": [[69, "the-mapc2p-function"]], "Marching Front algorithm": [[70, "marching-front-algorithm"]], "Function arguments": [[70, "function-arguments"]], "output array": [[70, "output-array"]], "creating a masked array": [[70, "creating-a-masked-array"]], "topofile mask for initializing dry points": [[70, "topofile-mask-for-initializing-dry-points"]], "fgmax points": [[70, "fgmax-points"]], "flag regions": [[70, "flag-regions"]], "The mask argument": [[70, "the-mask-argument"]], "The previous_pts_chosen argument": [[70, "the-previous-pts-chosen-argument"]], "Finding all points below a given elevation": [[70, "finding-all-points-below-a-given-elevation"]], "Create a buffer zone along shore": [[70, "create-a-buffer-zone-along-shore"]], "Choose points only near shore": [[70, "choose-points-only-near-shore"]], "Write out the masked array indicating fgmax points": [[70, "write-out-the-masked-array-indicating-fgmax-points"]], "Creating an AMR flag region": [[70, "creating-an-amr-flag-region"]], "Determining dry areas below MHW": [[70, "determining-dry-areas-below-mhw"]], "Plotting using Matlab": [[71, "plotting-using-matlab"]], "The Matlab search path": [[71, "the-matlab-search-path"]], "Creating output files": [[71, "creating-output-files"]], "The plotclaw command": [[71, "the-plotclaw-command"]], "The setplot file": [[71, "the-setplot-file"]], "The afterframe file": [[71, "the-afterframe-file"]], "Getting help": [[71, "getting-help"]], "Trouble shooting": [[71, "trouble-shooting"]], "Output files not found": [[71, "output-files-not-found"]], "MaxFrames not set": [[71, "maxframes-not-set"]], "Switching examples": [[71, "switching-examples"]], "Matlab Gallery": [[71, "matlab-gallery"]], "Nearshore interpolation": [[72, "nearshore-interpolation"]], "Using NetCDF output": [[73, "using-netcdf-output"]], "Creating a new application directory": [[74, "creating-a-new-application-directory"]], "Copying an existing example": [[74, "copying-an-existing-example"]], "Earthquake sources: Fault slip and the Okada model": [[75, "earthquake-sources-fault-slip-and-the-okada-model"]], "Fault slip on rectangular subfaults": [[75, "fault-slip-on-rectangular-subfaults"]], "Okada model": [[75, "okada-model"]], "Kinematic rupture": [[75, "kinematic-rupture"]], "Fault slip on triangular subfaults": [[75, "fault-slip-on-triangular-subfaults"]], "Using OpenMP": [[76, "using-openmp"]], "Using OpenMP with AMR": [[76, "using-openmp-with-amr"]], "Fixed grid output in GeoClaw": [[76, "fixed-grid-output-in-geoclaw"]], "Output data sytles and formats": [[77, "output-data-sytles-and-formats"]], "Output style": [[77, "output-style"]], "Output data formats": [[77, "output-data-formats"]], "ASCII output data format": [[77, "ascii-output-data-format"]], "fort.t0002": [[77, "fort-t0002"]], "fort.q0002": [[77, "fort-q0002"]], "Raw binary output data formats": [[77, "raw-binary-output-data-formats"]], "NetCDF output data format": [[77, "netcdf-output-data-format"]], "Output of aux arrays": [[77, "output-of-aux-arrays"]], "Which Clawpack solver should I use?": [[78, "which-clawpack-solver-should-i-use"]], "Installation and user interface": [[78, "installation-and-user-interface"]], "Algorithmic differences": [[78, "algorithmic-differences"]], "Parallel computing": [[78, "parallel-computing"]], "Clawpack Community Photos": [[79, "clawpack-community-photos"]], "2016 Developers\u2019 workshop at University of Washington": [[79, "id1"]], "2015 Developers\u2019 workshop at University of Utah": [[79, "id2"]], "2014 HPC3 workshop at KAUST": [[79, "id3"]], "2013 Claw-Dev workshop at UW": [[79, "id4"]], "2012 HPC3 workshop at KAUST": [[79, "id6"]], "2011 coding sprints at UW": [[79, "coding-sprints-at-uw"]], "2010 GeoClaw hacking UW": [[79, "geoclaw-hacking-uw"]], "Plotting examples": [[80, "plotting-examples"]], "Plotting with Visclaw": [[81, "plotting-with-visclaw"]], "Plotting as post-processing": [[81, "plotting-as-post-processing"]], "Plotting on the fly": [[81, "plotting-on-the-fly"]], "Plotting hints and FAQ": [[82, "plotting-hints-and-faq"]], "What\u2019s the difference between make .plots and make plots ?": [[82, "what-s-the-difference-between-make-plots-and-make-plots"]], "How to plot a something other than a component of q?": [[82, "how-to-plot-a-something-other-than-a-component-of-q"]], "How to add another curve to a plot, e.g. the true solution?": [[82, "how-to-add-another-curve-to-a-plot-e-g-the-true-solution"]], "How to change the title in a plot?": [[82, "how-to-change-the-title-in-a-plot"]], "How to specify outdir, the directory to find fort.* files for plotting?": [[82, "how-to-specify-outdir-the-directory-to-find-fort-files-for-plotting"]], "How to specify a different outdir for some plot item?": [[82, "how-to-specify-a-different-outdir-for-some-plot-item"]], "How to set plot parameters that are not provided as attributes of ClawPlotItem?": [[82, "how-to-set-plot-parameters-that-are-not-provided-as-attributes-of-clawplotitem"]], "How to change the size or background color of a figure?": [[82, "how-to-change-the-size-or-background-color-of-a-figure"]], "Specifying colormaps for pcolor or contourf plots": [[82, "specifying-colormaps-for-pcolor-or-contourf-plots"]], "How to debug setplot.py?": [[82, "how-to-debug-setplot-py"]], "Plotting routines for GeoClaw": [[83, "plotting-routines-for-geoclaw"]], "Plotting options in Python": [[84, "plotting-options-in-python"]], "Producing html plots from the command line": [[84, "producing-html-plots-from-the-command-line"]], "Producing a latex file with plots from the command line": [[84, "producing-a-latex-file-with-plots-from-the-command-line"]], "Setting plot parameters with a setplot function": [[84, "setting-plot-parameters-with-a-setplot-function"]], "Interactive plotting with Iplotclaw": [[84, "interactive-plotting-with-iplotclaw"]], "Access to current_data": [[84, "access-to-current-data"]], "printframes": [[84, "printframes"]], "Specifying what and how to plot": [[84, "specifying-what-and-how-to-plot"]], "Installation Prerequisites": [[85, "installation-prerequisites"]], "Operating system": [[85, "operating-system"]], "Fortran": [[85, "fortran"]], "Python": [[85, "python"]], "pip": [[85, "pip"]], "Git": [[85, "git"]], "About PyClaw": [[86, "about-pyclaw"]], "Contributors": [[86, "contributors"]], "PyClaw Basics": [[87, "pyclaw-basics"]], "Understanding Pyclaw Classes": [[88, "understanding-pyclaw-classes"]], "Flow of a Pyclaw Simulation": [[88, "flow-of-a-pyclaw-simulation"]], "Creation of a Pyclaw Solution": [[88, "creation-of-a-pyclaw-solution"]], "Creation of a Pyclaw Solver": [[88, "creation-of-a-pyclaw-solver"]], "Creating and Running a Simulation with Controller": [[88, "creating-and-running-a-simulation-with-controller"]], "Restarting a simulation": [[88, "restarting-a-simulation"]], "Outputting aux values": [[88, "outputting-aux-values"]], "Outputting derived quantities": [[88, "outputting-derived-quantities"], [98, "outputting-derived-quantities"]], "Porting a problem from Clawpack 4.6.x to PyClaw": [[89, "porting-a-problem-from-clawpack-4-6-x-to-pyclaw"]], "Running PyClaw in the cloud": [[90, "running-pyclaw-in-the-cloud"]], "Sage Math Cloud": [[90, "sage-math-cloud"]], "Pyclaw Controller Class": [[91, "pyclaw-controller-class"]], "pyclaw.controller.Controller": [[91, "pyclaw-controller-controller"]], "Pyclaw Limiters": [[92, "pyclaw-limiters"]], "clawpack.pyclaw.limiters.tvd": [[92, "module-clawpack.pyclaw.limiters.tvd"]], "CFL Independent Limiters": [[92, "cfl-independent-limiters"]], "CFL Dependent Limiters": [[92, "cfl-dependent-limiters"]], "Working with PyClaw\u2019s built-in examples": [[93, "working-with-pyclaw-s-built-in-examples"]], "Running and plotting examples": [[93, "running-and-plotting-examples"]], "Interactively in IPython": [[93, "interactively-in-ipython"]], "Built-in examples": [[93, "built-in-examples"]], "Adding new examples": [[93, "adding-new-examples"]], "PyClaw Geometry": [[94, "pyclaw-geometry"]], "Serial Geometry Objects": [[94, "serial-geometry-objects"]], "pyclaw.geometry.Domain": [[94, "pyclaw-geometry-domain"]], "pyclaw.geometry.Patch": [[94, "pyclaw-geometry-patch"]], "pyclaw.geometry.Grid": [[94, "pyclaw-geometry-grid"]], "pyclaw.geometry.Dimension": [[94, "pyclaw-geometry-dimension"]], "Parallel Geometry Objects": [[94, "parallel-geometry-objects"]], "petclaw.geometry.Domain": [[94, "petclaw-geometry-domain"]], "petclaw.geometry.Patch": [[94, "petclaw-geometry-patch"]], "Going Further": [[95, "going-further"]], "PyClaw installation": [[96, "pyclaw-installation"]], "Features": [[96, "features"]], "PyClaw Documentation": [[96, "pyclaw-documentation"]], "PyClaw Modules reference documentation": [[96, "pyclaw-modules-reference-documentation"]], "Riemann Solvers reference documentation": [[96, "riemann-solvers-reference-documentation"]], "Indices and tables": [[96, "indices-and-tables"]], "Citing PyClaw": [[96, "citing-pyclaw"]], "Pyclaw Input/Output Package": [[97, "pyclaw-input-output-package"]], "pyclaw.fileio.ascii": [[97, "module-clawpack.pyclaw.fileio.ascii"]], "pyclaw.fileio.binary": [[97, "module-clawpack.pyclaw.fileio.binary"]], "pyclaw.fileio.hdf5": [[97, "module-clawpack.pyclaw.fileio.hdf5"]], "pyclaw.fileio.netcdf": [[97, "module-clawpack.pyclaw.fileio.netcdf"]], "PyClaw output": [[98, "pyclaw-output"]], "Output frames": [[98, "output-frames"]], "When output is saved/written": [[98, "when-output-is-saved-written"]], "Where and how output is written": [[98, "where-and-how-output-is-written"]], "What output is written": [[98, "what-output-is-written"]], "Outputting functionals": [[98, "outputting-functionals"]], "Using gauges": [[98, "using-gauges"]], "Logging": [[98, "logging"]], "Running in parallel": [[99, "running-in-parallel"]], "Installing PETSc": [[99, "installing-petsc"]], "Testing your installation": [[99, "testing-your-installation"], [160, "testing-your-installation"]], "Running and plotting an example": [[99, "running-and-plotting-an-example"]], "Tips for making your application run correctly in parallel": [[99, "tips-for-making-your-application-run-correctly-in-parallel"]], "Passing options to PETSc": [[99, "passing-options-to-petsc"]], "Plotting PyClaw results": [[100, "plotting-pyclaw-results"]], "Basics": [[100, "basics"]], "Plotting result from parallel runs": [[100, "plotting-result-from-parallel-runs"]], "Setting up your own problem": [[101, "setting-up-your-own-problem"]], "Writing the initialization script": [[101, "writing-the-initialization-script"]], "Setting initial conditions": [[101, "setting-initial-conditions"]], "Setting auxiliary variables": [[101, "setting-auxiliary-variables"]], "Setting boundary conditions": [[101, "setting-boundary-conditions"]], "Setting solver options": [[101, "setting-solver-options"]], "Using your own Riemann solver": [[101, "using-your-own-riemann-solver"]], "Adding source terms": [[101, "adding-source-terms"]], "Setting up the Makefile": [[101, "setting-up-the-makefile"]], "Riemann Solver Package": [[102, "riemann-solver-package"]], "Acoustics": [[102, "acoustics"]], "Advection": [[102, "advection"]], "Burgers Equation": [[102, "burgers-equation"]], "Euler Equations": [[102, "euler-equations"]], "Shallow Water Equations": [[102, "shallow-water-equations"]], "PyClaw Solutions": [[103, "pyclaw-solutions"]], "pyclaw.solution.Solution": [[103, "pyclaw-solution-solution"]], "Using PyClaw\u2019s solvers: Classic and SharpClaw": [[104, "using-pyclaw-s-solvers-classic-and-sharpclaw"]], "SharpClaw Solvers": [[104, "sharpclaw-solvers"]], "pyclaw.sharpclaw": [[104, "pyclaw-sharpclaw"]], "Pyclaw Classic Clawpack Solvers": [[104, "pyclaw-classic-clawpack-solvers"]], "pyclaw.classic.solver": [[104, "pyclaw-classic-solver"]], "Change to Custom BC Function Signatures": [[104, "change-to-custom-bc-function-signatures"]], "Installing PyClaw": [[105, "installing-pyclaw"]], "Dependencies: Python, gfortran, numpy, and matplotlib": [[105, "dependencies-python-gfortran-numpy-and-matplotlib"]], "Obtaining Python, numpy, and matplotlib": [[105, "obtaining-python-numpy-and-matplotlib"]], "Clawpack": [[105, "clawpack"]], "Testing your installation with nose": [[105, "testing-your-installation-with-nose"]], "Next steps": [[105, "next-steps"]], "PyClaw State": [[106, "pyclaw-state"]], "Serial pyclaw.state.State": [[106, "serial-pyclaw-state-state"]], "Parallel petclaw.state.State": [[106, "parallel-petclaw-state-state"]], "Troubleshooting": [[107, "troubleshooting"], [165, "troubleshooting"]], "Compilation errors": [[107, "compilation-errors"]], "Use Fortran-ordered arrays": [[107, "use-fortran-ordered-arrays"]], "Installation": [[107, "installation"]], "PyClaw tutorial: Solve the acoustics equations": [[108, "pyclaw-tutorial-solve-the-acoustics-equations"]], "The Solver": [[108, "the-solver"]], "The domain": [[108, "the-domain"]], "Initial condition": [[108, "initial-condition"]], "Problem-specific parameters": [[108, "problem-specific-parameters"]], "The controller": [[108, "the-controller"]], "Pyclaw Utility Module": [[109, "pyclaw-utility-module"]], "pyclaw.util": [[109, "module-clawpack.pyclaw.util"]], "Python Hints": [[110, "python-hints"]], "Dropping support for Python 2.7": [[110, "dropping-support-for-python-2-7"]], "References and tutorials": [[110, "references-and-tutorials"]], "Notebooks": [[110, "notebooks"]], "Python path": [[111, "python-path"]], "whichclaw.py": [[111, "whichclaw-py"]], "Which version was imported?": [[111, "which-version-was-imported"]], "sys.path": [[111, "sys-path"]], "easy-install.pth": [[111, "easy-install-pth"]], "PYTHONPATH": [[111, "pythonpath"], [146, "pythonpath"]], "qinit default routines": [[112, "qinit-default-routines"]], "qinit routine in GeoClaw": [[112, "qinit-routine-in-geoclaw"]], "Quick start guide for storm surge modeling": [[113, "quick-start-guide-for-storm-surge-modeling"]], "Quick start guide for tsunami modeling": [[114, "quick-start-guide-for-tsunami-modeling"]], "AMR refinement criteria": [[115, "amr-refinement-criteria"]], "Flagging criteria": [[115, "flagging-criteria"]], "flag2refine": [[115, "flag2refine"]], "Richardson extrapolation": [[115, "richardson-extrapolation"]], "Specifying AMR regions": [[115, "specifying-amr-regions"]], "Implementation": [[115, "implementation"]], "Flagging criteria in GeoClaw": [[115, "flagging-criteria-in-geoclaw"]], "Regression testing": [[116, "regression-testing"]], "Running the tests": [[116, "running-the-tests"], [116, "id2"]], "Fortran codes": [[116, "fortran-codes"]], "Travis continuous integration": [[116, "travis-continuous-integration"]], "Diff tools for checking test output": [[116, "diff-tools-for-checking-test-output"]], "chardiff tool for line-by-line comparison of output files": [[116, "chardiff-tool-for-line-by-line-comparison-of-output-files"]], "imagediff tool for pixel comparison of plots": [[116, "imagediff-tool-for-pixel-comparison-of-plots"]], "Running and writing tests in PyClaw": [[116, "running-and-writing-tests-in-pyclaw"]], "Running serial tests simultaneously": [[116, "running-serial-tests-simultaneously"]], "Running a specific test": [[116, "running-a-specific-test"]], "Doctests": [[116, "doctests"]], "Writing New Tests": [[116, "writing-new-tests"]], "v5.0.0 release notes": [[117, "v5-0-0-release-notes"]], "Changes to classic, riemann, amrclaw, geoclaw, visclaw": [[117, "changes-to-classic-riemann-amrclaw-geoclaw-visclaw"]], "v5.10.0 release notes": [[118, "v5-10-0-release-notes"]], "v5.1.0 release notes": [[119, "v5-1-0-release-notes"]], "v5.2.0 release notes": [[120, "v5-2-0-release-notes"]], "v5.2.1 release notes": [[121, "v5-2-1-release-notes"]], "v5.2.2 release notes": [[122, "v5-2-2-release-notes"]], "v5.3.0 release notes": [[123, "v5-3-0-release-notes"]], "v5.3.1 release notes": [[124, "v5-3-1-release-notes"]], "v5.4.0 release notes": [[125, "v5-4-0-release-notes"]], "Global changes": [[125, "global-changes"]], "v5.4.1 release notes": [[126, "v5-4-1-release-notes"]], "Changes to documentation": [[126, "changes-to-documentation"], [127, "changes-to-documentation"]], "v5.5.0 release notes": [[127, "v5-5-0-release-notes"]], "v5.6.0 release notes": [[128, "v5-6-0-release-notes"]], "v5.6.1 release notes": [[129, "v5-6-1-release-notes"]], "v5.7.0 release notes": [[130, "v5-7-0-release-notes"]], "Python support": [[130, "python-support"]], "v5.7.1 release notes": [[131, "v5-7-1-release-notes"]], "v5.8.0 release notes": [[132, "v5-8-0-release-notes"]], "v5.8.1 release notes": [[133, "v5-8-1-release-notes"]], "v5.8.2 release notes": [[134, "v5-8-2-release-notes"]], "v5.9.0 release notes": [[135, "v5-9-0-release-notes"]], "v5.9.1 release notes": [[136, "v5-9-1-release-notes"]], "v5.9.2 release notes": [[137, "v5-9-2-release-notes"]], "Releases of Clawpack and release notes": [[138, "releases-of-clawpack-and-release-notes"]], "Other notes:": [[138, "other-notes"]], "Releases:": [[138, "id1"]], "Clawpack 4.x": [[138, "clawpack-4-x"]], "Checkpointing and restarting": [[139, "checkpointing-and-restarting"]], "Checkpointing a computation": [[139, "checkpointing-a-computation"]], "Restarting a computation": [[139, "restarting-a-computation"]], "Modifying the Makefile for a restart": [[139, "modifying-the-makefile-for-a-restart"]], "Output files after a restart": [[139, "output-files-after-a-restart"]], "Riemann solvers": [[140, "riemann-solvers"]], "One-dimensional Riemann solver": [[140, "one-dimensional-riemann-solver"]], "Pointwise Riemann solvers": [[140, "pointwise-riemann-solvers"]], "f-wave Riemann solvers": [[140, "f-wave-riemann-solvers"]], "2D Riemann solvers": [[140, "d-riemann-solvers"]], "Using a custom solver": [[140, "using-a-custom-solver"]], "Adding a solver to the Riemann repository": [[140, "adding-a-solver-to-the-riemann-repository"]], "Shallow water Riemann solvers in Clawpack": [[141, "shallow-water-riemann-solvers-in-clawpack"]], "One dimension": [[141, "one-dimension"]], "Two dimensions": [[141, "two-dimensions"]], "Layered shallow water equations": [[141, "layered-shallow-water-equations"]], "Potentially useful contributions (what\u2019s missing)": [[141, "potentially-useful-contributions-whats-missing"]], "Demonstrations": [[141, "demonstrations"]], "Roe": [[141, "roe"]], "HLL": [[141, "hll"]], "Ruled Rectangles": [[142, "ruled-rectangles"]], "Relation to convex polygons": [[142, "relation-to-convex-polygons"]], "Other attributes and methods": [[142, "other-attributes-and-methods"]], "ds": [[142, "ds"]], "slu": [[142, "slu"]], "bounding_box": [[142, "bounding-box"]], "mask_outside": [[142, "mask-outside"]], "read and write, and instantiating from a file": [[142, "read-and-write-and-instantiating-from-a-file"]], "make_kml": [[142, "make-kml"]], "A GeoClaw AMR flag region": [[142, "a-geoclaw-amr-flag-region"]], "A simple rectangle": [[142, "a-simple-rectangle"]], "Defining a Ruled Rectangle covering selected cells": [[142, "defining-a-ruled-rectangle-covering-selected-cells"]], "Example covering the continental shelf": [[142, "example-covering-the-continental-shelf"]], "Setting sea_level": [[143, "setting-sea-level"]], "Set Eta Init \u2013 spatially varying initial surface elevation": [[144, "set-eta-init-spatially-varying-initial-surface-elevation"]], "Default behavior, adjusting sea level by seismic deformation": [[144, "default-behavior-adjusting-sea-level-by-seismic-deformation"]], "Other use cases": [[144, "other-use-cases"]], "setaux default routines": [[145, "setaux-default-routines"]], "setaux routine in GeoClaw": [[145, "setaux-routine-in-geoclaw"]], "Set environment variables": [[146, "set-environment-variables"]], "CLAW": [[146, "claw"]], "FC": [[146, "fc"]], "Using setplot.py to specify the desired plots": [[147, "using-setplot-py-to-specify-the-desired-plots"]], "Plotting Data Objects": [[147, "plotting-data-objects"]], "Overview": [[147, "overview"]], "Specifying classic run-time parameters in setrun.py": [[148, "specifying-classic-run-time-parameters-in-setrun-py"]], "Input": [[148, "input"], [149, "input"]], "Output": [[148, "output"], [149, "output"]], "Run-time parameters": [[148, "run-time-parameters"], [149, "run-time-parameters"]], "Specifying AMRClaw run-time parameters in setrun.py": [[149, "specifying-amrclaw-run-time-parameters-in-setrun-py"]], "Special AMR parameters": [[149, "special-amr-parameters"]], "Debugging flags for additional printing": [[149, "debugging-flags-for-additional-printing"]], "Sample setrun.py module for AMRClaw": [[150, "sample-setrun-py-module-for-amrclaw"]], "Specifying GeoClaw parameters in setrun.py": [[151, "specifying-geoclaw-parameters-in-setrun-py"]], "Additional AMR parameters": [[151, "additional-amr-parameters"]], "General geo parameters": [[151, "general-geo-parameters"]], "Topography data file parameters": [[151, "topography-data-file-parameters"]], "qinit data file parameters": [[151, "qinit-data-file-parameters"]], "Force some cells to be initially dry": [[151, "force-some-cells-to-be-initially-dry"]], "Adjust sea level in some regions": [[151, "adjust-sea-level-in-some-regions"]], "AMR refinement region parameters": [[151, "amr-refinement-region-parameters"]], "Deprecated Fixedgrid output parameters": [[151, "deprecated-fixedgrid-output-parameters"]], "Fixed grid maximum monitoring / arrival times": [[151, "fixed-grid-maximum-monitoring-arrival-times"]], "Fixed grid output": [[151, "fixed-grid-output"]], "Storm Specification Data": [[151, "storm-specification-data"]], "Sample setrun.py module for classic Clawpack": [[152, "sample-setrun-py-module-for-classic-clawpack"]], "Saving and sharing results": [[153, "saving-and-sharing-results"]], "Making webpages of plots": [[153, "making-webpages-of-plots"]], "Sharing your results": [[153, "sharing-your-results"]], "Jupyter notebooks": [[153, "jupyter-notebooks"]], "Source terms for shallow water on the sphere": [[154, "source-terms-for-shallow-water-on-the-sphere"]], "Compiling the Sphinx documentation locally": [[155, "compiling-the-sphinx-documentation-locally"]], "src1d default routines": [[156, "src1d-default-routines"]], "src1d routine in GeoClaw": [[156, "src1d-routine-in-geoclaw"]], "src default routines": [[157, "src-default-routines"]], "src routine in GeoClaw": [[157, "src-routine-in-geoclaw"]], "Storm Specification Class and Tools": [[158, "storm-specification-class-and-tools"]], "Sources for Storm Surge Data": [[159, "sources-for-storm-surge-data"]], "Timing Statistics": [[161, "timing-statistics"]], "Topography data": [[162, "topography-data"]], "Downloading topography files": [[162, "downloading-topography-files"]], "NetCDF format": [[162, "netcdf-format"]], "Topography displacement files": [[162, "topography-displacement-files"]], "qinit data file": [[162, "qinit-data-file"]], "Python tools for working with topo and dtopo": [[163, "python-tools-for-working-with-topo-and-dtopo"]], "topotools module for working with topography data": [[164, "topotools-module-for-working-with-topography-data"]], "Troubleshooting Installation": [[165, "troubleshooting-installation"]], "Troubleshooting Fortran:": [[165, "troubleshooting-fortran"]], "Setting the Fortran compiler to be used by f2py (pip)": [[165, "setting-the-fortran-compiler-to-be-used-by-f2py-pip"]], "Trouble compiling Fortran code at the command line": [[165, "trouble-compiling-fortran-code-at-the-command-line"]], "Trouble running \u201cmake .exe\u201d": [[165, "trouble-running-make-exe"]], "Trouble running \u201cmake .data\u201d": [[165, "trouble-running-make-data"]], "Trouble running \u201cmake .output\u201d": [[165, "trouble-running-make-output"]], "Trouble running \u201cmake .plots\u201d": [[165, "trouble-running-make-plots"]], "Some sources of tsunami data": [[166, "some-sources-of-tsunami-data"]], "Topography / bathymetry": [[166, "topography-bathymetry"]], "Earthquake source models": [[166, "earthquake-source-models"]], "DART buoy data": [[166, "dart-buoy-data"]], "Tide gauges": [[166, "tide-gauges"]], "User files required for the Fortran code": [[167, "user-files-required-for-the-fortran-code"]], "Specifying the initial conditions": [[167, "specifying-the-initial-conditions"]], "Specifying the Riemann solver": [[167, "specifying-the-riemann-solver"]], "Specifying boundary conditions": [[167, "specifying-boundary-conditions"]], "Specifying problem-specific data": [[167, "specifying-problem-specific-data"]], "Specifying spatially-varying data using setaux": [[167, "specifying-spatially-varying-data-using-setaux"]], "Using b4step for work to be done before each time step": [[167, "using-b4step-for-work-to-be-done-before-each-time-step"]], "Using src for source terms": [[167, "using-src-for-source-terms"]], "Using src1d for source terms with AMRClaw": [[167, "using-src1d-for-source-terms-with-amrclaw"]], "Plotting with VisIt": [[168, "plotting-with-visit"]], "Clawpack Virtual Machine": [[169, "clawpack-virtual-machine"]], "Wave-propagation algorithms": [[170, "wave-propagation-algorithms"]], "One space dimension": [[170, "one-space-dimension"]], "Godunov\u2019s method": [[170, "godunov-s-method"]], "High-resolution methods": [[170, "high-resolution-methods"]], "f-wave formulation": [[170, "f-wave-formulation"]], "Capacity functions": [[170, "capacity-functions"]], "Source terms": [[170, "source-terms"]]}, "indexentries": {"clawplotaxes (built-in class)": [[0, "ClawPlotAxes"]], "gethandle()": [[0, "gethandle"], [2, "gethandle"], [3, "gethandle"]], "new_plotitem()": [[0, "new_plotitem"]], "clawplotdata (built-in class)": [[1, "ClawPlotData"]], "clearfigures()": [[1, "clearfigures"]], "clearframes()": [[1, "clearframes"]], "getaxes()": [[1, "getaxes"]], "getfigure()": [[1, "getfigure"]], "getframe()": [[1, "getframe"], [3, "getframe"]], "getitem()": [[1, "getitem"]], "iplotclaw()": [[1, "iplotclaw"]], "new_plotfigure()": [[1, "new_plotfigure"]], "plotframe()": [[1, "plotframe"]], "printframes()": [[1, "printframes"]], "showitems()": [[1, "showitems"]], "clawplotfigure (built-in class)": [[2, "ClawPlotFigure"]], "new_plotaxes()": [[2, "new_plotaxes"]], "clawplotitem (built-in class)": [[3, "ClawPlotItem"]], "csvfault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.CSVFault"]], "dtopography (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.DTopography"]], "dtopography1d (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.DTopography1d"]], "fault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.Fault"]], "fault1d (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.Fault1d"]], "mo() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.Mo"]], "mo() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.Mo"]], "mw() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.Mw"]], "mw() (in module clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.Mw"]], "siftfault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.SiftFault"]], "subfault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.SubFault"]], "subfault1d (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d"]], "subdividedplanefault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.SubdividedPlaneFault"]], "tensorproductfault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.TensorProductFault"]], "ucsbfault (class in clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.UCSBFault"]], "calculate_geometry() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.calculate_geometry"]], "calculate_geometry_triangles() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.calculate_geometry_triangles"]], "centers (clawpack.geoclaw.dtopotools.subfault property)": [[32, "clawpack.geoclaw.dtopotools.SubFault.centers"]], "clawpack.geoclaw.dtopotools": [[32, "module-clawpack.geoclaw.dtopotools"]], "containing_rect() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.containing_rect"]], "convert_to_standard_units() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.convert_to_standard_units"]], "coordinate_specification (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.coordinate_specification"]], "coordinate_specification (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.coordinate_specification"]], "corners (clawpack.geoclaw.dtopotools.subfault property)": [[32, "clawpack.geoclaw.dtopotools.SubFault.corners"]], "create_dtopo_xy() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.create_dtopo_xy"]], "create_dtopography() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.create_dtopography"]], "dz_at_t() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.dZ_at_t"]], "dz_at_t() (clawpack.geoclaw.dtopotools.dtopography1d method)": [[32, "clawpack.geoclaw.dtopotools.DTopography1d.dZ_at_t"]], "dz_cellave_at_t() (clawpack.geoclaw.dtopotools.dtopography1d method)": [[32, "clawpack.geoclaw.dtopotools.DTopography1d.dZ_cellave_at_t"]], "dz_max() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.dZ_max"]], "depth (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.depth"]], "dip (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.dip"]], "dynamic_slip() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.dynamic_slip"]], "gauss_pts (clawpack.geoclaw.dtopotools.subfault property)": [[32, "clawpack.geoclaw.dtopotools.SubFault.gauss_pts"]], "latitude (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.latitude"]], "latitude (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.latitude"]], "length (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.length"]], "length (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.length"]], "longitude (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.longitude"]], "longitude (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.longitude"]], "module": [[32, "module-clawpack.geoclaw.dtopotools"], [35, "module-clawpack.geoclaw.fgmax_tools"], [37, "module-clawpack.geoclaw.fgout_tools"], [51, "module-clawpack.geoclaw.util"], [63, "module-clawpack.geoclaw.kmltools"], [92, "module-clawpack.pyclaw.limiters.tvd"], [97, "module-clawpack.pyclaw.fileio.ascii"], [97, "module-clawpack.pyclaw.fileio.binary"], [97, "module-clawpack.pyclaw.fileio.hdf5"], [97, "module-clawpack.pyclaw.fileio.netcdf"], [102, "module-clawpack.riemann.acoustics_1D_py"], [102, "module-clawpack.riemann.advection_1D_py"], [102, "module-clawpack.riemann.burgers_1D_py"], [102, "module-clawpack.riemann.euler_1D_py"], [102, "module-clawpack.riemann.shallow_1D_py"], [109, "module-clawpack.pyclaw.util"], [158, "module-clawpack.geoclaw.surge.storm"], [164, "module-clawpack.geoclaw.topotools"]], "mu (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.mu"]], "okada() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.okada"]], "plot_dz_colors() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.plot_dZ_colors"]], "plot_dz_colors() (in module clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.plot_dZ_colors"]], "plot_dz_contours() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.plot_dZ_contours"]], "plot_dz_contours() (in module clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.plot_dZ_contours"]], "plot_subfaults() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.plot_subfaults"]], "plot_subfaults_depth() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.plot_subfaults_depth"]], "rake (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rake"]], "rake (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.rake"]], "read() (clawpack.geoclaw.dtopotools.csvfault method)": [[32, "clawpack.geoclaw.dtopotools.CSVFault.read"]], "read() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.read"]], "read() (clawpack.geoclaw.dtopotools.dtopography1d method)": [[32, "clawpack.geoclaw.dtopotools.DTopography1d.read"]], "read() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.read"]], "read() (clawpack.geoclaw.dtopotools.ucsbfault method)": [[32, "clawpack.geoclaw.dtopotools.UCSBFault.read"]], "rise_fraction() (in module clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.rise_fraction"]], "rise_shape (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rise_shape"]], "rise_time (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rise_time"]], "rise_time_starting (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rise_time_starting"]], "rupture_time (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rupture_time"]], "rupture_type (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.rupture_type"]], "set_corners() (clawpack.geoclaw.dtopotools.subfault method)": [[32, "clawpack.geoclaw.dtopotools.SubFault.set_corners"]], "set_dynamic_slip() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.set_dynamic_slip"]], "set_subfaults() (clawpack.geoclaw.dtopotools.siftfault method)": [[32, "clawpack.geoclaw.dtopotools.SiftFault.set_subfaults"]], "slip (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.slip"]], "strike (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.strike"]], "strike (clawpack.geoclaw.dtopotools.subfault1d attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault1d.strike"]], "strike_direction() (in module clawpack.geoclaw.dtopotools)": [[32, "clawpack.geoclaw.dtopotools.strike_direction"]], "subdivide() (clawpack.geoclaw.dtopotools.subdividedplanefault method)": [[32, "clawpack.geoclaw.dtopotools.SubdividedPlaneFault.subdivide"]], "width (clawpack.geoclaw.dtopotools.subfault attribute)": [[32, "clawpack.geoclaw.dtopotools.SubFault.width"]], "write() (clawpack.geoclaw.dtopotools.dtopography method)": [[32, "clawpack.geoclaw.dtopotools.DTopography.write"]], "write() (clawpack.geoclaw.dtopotools.dtopography1d method)": [[32, "clawpack.geoclaw.dtopotools.DTopography1d.write"]], "write() (clawpack.geoclaw.dtopotools.fault method)": [[32, "clawpack.geoclaw.dtopotools.Fault.write"]], "fgmaxgrid (class in clawpack.geoclaw.fgmax_tools)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid"]], "adjust_fgmax_1d() (in module clawpack.geoclaw.fgmax_tools)": [[35, "clawpack.geoclaw.fgmax_tools.adjust_fgmax_1d"]], "bounding_box() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.bounding_box"]], "clawpack.geoclaw.fgmax_tools": [[35, "module-clawpack.geoclaw.fgmax_tools"]], "interp_dz() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.interp_dz"]], "ps4_to_arrays() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.ps4_to_arrays"]], "read_fgmax_grids_data() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.read_fgmax_grids_data"]], "read_output() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.read_output"]], "write_to_fgmax_data() (clawpack.geoclaw.fgmax_tools.fgmaxgrid method)": [[35, "clawpack.geoclaw.fgmax_tools.FGmaxGrid.write_to_fgmax_data"]], "b (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.B"]], "fgoutframe (class in clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame"]], "fgoutgrid (class in clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid"]], "x (clawpack.geoclaw.fgout_tools.fgoutgrid property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.X"], [37, "clawpack.geoclaw.fgout_tools.FGoutGrid.x"]], "y (clawpack.geoclaw.fgout_tools.fgoutgrid property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.Y"], [37, "clawpack.geoclaw.fgout_tools.FGoutGrid.y"]], "clawpack.geoclaw.fgout_tools": [[37, "module-clawpack.geoclaw.fgout_tools"]], "eta (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.eta"]], "extent_centers (clawpack.geoclaw.fgout_tools.fgoutgrid property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.extent_centers"]], "extent_edges (clawpack.geoclaw.fgout_tools.fgoutgrid property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.extent_edges"]], "get_as_array() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.get_as_array"]], "h (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.h"]], "hss (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.hss"]], "hu (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.hu"]], "hv (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.hv"]], "make_fgout_fcn_xy() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.make_fgout_fcn_xy"]], "make_fgout_fcn_xyt() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.make_fgout_fcn_xyt"]], "print_netcdf_info() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.print_netcdf_info"]], "read_fgout_grids_data() (clawpack.geoclaw.fgout_tools.fgoutgrid method)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.read_fgout_grids_data"]], "read_frame() (clawpack.geoclaw.fgout_tools.fgoutgrid method)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.read_frame"]], "read_netcdf() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.read_netcdf"]], "read_netcdf_arrays() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.read_netcdf_arrays"]], "s (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.s"]], "set_plotdata() (clawpack.geoclaw.fgout_tools.fgoutgrid method)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.set_plotdata"]], "u (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.u"]], "v (clawpack.geoclaw.fgout_tools.fgoutframe property)": [[37, "clawpack.geoclaw.fgout_tools.FGoutFrame.v"]], "write_netcdf() (in module clawpack.geoclaw.fgout_tools)": [[37, "clawpack.geoclaw.fgout_tools.write_netcdf"]], "write_to_fgout_data() (clawpack.geoclaw.fgout_tools.fgoutgrid method)": [[37, "clawpack.geoclaw.fgout_tools.FGoutGrid.write_to_fgout_data"]], "bearing() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.bearing"]], "clawpack.geoclaw.util": [[51, "module-clawpack.geoclaw.util"]], "dist_latlong2meters() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.dist_latlong2meters"]], "dist_meters2latlong() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.dist_meters2latlong"]], "dms2decimal() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.dms2decimal"]], "fetch_noaa_tide_data() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.fetch_noaa_tide_data"]], "gctransect() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.gctransect"]], "haversine() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.haversine"]], "inv_haversine() (in module clawpack.geoclaw.util)": [[51, "clawpack.geoclaw.util.inv_haversine"]], "box2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.box2kml"]], "clawpack.geoclaw.kmltools": [[63, "module-clawpack.geoclaw.kmltools"]], "deg2dms() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.deg2dms"]], "dtopo2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.dtopo2kml"]], "f2s() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.f2s"]], "fgmax2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.fgmax2kml"]], "fgout2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.fgout2kml"]], "gauges2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.gauges2kml"]], "kml_build_colorbar() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.kml_build_colorbar"]], "kml_cb() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.kml_cb"]], "kml_png() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.kml_png"]], "kml_timespan() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.kml_timespan"]], "line2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.line2kml"]], "make_input_data_kmls() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.make_input_data_kmls"]], "pcolorcells_for_kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.pcolorcells_for_kml"]], "png2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.png2kml"]], "poly2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.poly2kml"]], "quad2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.quad2kml"]], "regions2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.regions2kml"]], "topo2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.topo2kml"]], "topo2kmz() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.topo2kmz"]], "transect2kml() (in module clawpack.geoclaw.kmltools)": [[63, "clawpack.geoclaw.kmltools.transect2kml"]], "controller (class in clawpack.pyclaw.controller)": [[91, "clawpack.pyclaw.controller.Controller"]], "f_file_name (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.F_file_name"]], "f_path (clawpack.pyclaw.controller.controller property)": [[91, "clawpack.pyclaw.controller.Controller.F_path"]], "check_validity() (clawpack.pyclaw.controller.controller method)": [[91, "clawpack.pyclaw.controller.Controller.check_validity"]], "compute_f (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.compute_F"]], "compute_p (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.compute_p"]], "file_prefix_p (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.file_prefix_p"]], "frames (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.frames"]], "keep_copy (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.keep_copy"]], "nstepout (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.nstepout"]], "num_output_times (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.num_output_times"]], "out_times (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.out_times"]], "outdir (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.outdir"]], "outdir_p (clawpack.pyclaw.controller.controller property)": [[91, "clawpack.pyclaw.controller.Controller.outdir_p"]], "output_file_prefix (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.output_file_prefix"]], "output_format (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.output_format"]], "output_options (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.output_options"]], "output_style (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.output_style"]], "overwrite (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.overwrite"]], "plot() (clawpack.pyclaw.controller.controller method)": [[91, "clawpack.pyclaw.controller.Controller.plot"]], "plotdata (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.plotdata"]], "run() (clawpack.pyclaw.controller.controller method)": [[91, "clawpack.pyclaw.controller.Controller.run"]], "rundir (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.rundir"]], "runmake (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.runmake"]], "savecode (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.savecode"]], "solver (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.solver"]], "tfinal (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.tfinal"]], "verbosity (clawpack.pyclaw.controller.controller property)": [[91, "clawpack.pyclaw.controller.Controller.verbosity"]], "viewable_attributes (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.viewable_attributes"]], "write_aux_always (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.write_aux_always"]], "write_aux_init (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.write_aux_init"]], "xclawcmd (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.xclawcmd"]], "xclawerr (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.xclawerr"]], "xclawout (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.xclawout"]], "xdir (clawpack.pyclaw.controller.controller attribute)": [[91, "clawpack.pyclaw.controller.Controller.xdir"]], "arora_roe() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.arora_roe"]], "beta_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.beta_limiter"]], "cada_torrilhon_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.cada_torrilhon_limiter"]], "cada_torrilhon_limiter_nonlinear() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.cada_torrilhon_limiter_nonlinear"]], "cfl_superbee() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.cfl_superbee"]], "cfl_superbee_theta() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.cfl_superbee_theta"]], "clawpack.pyclaw.limiters.tvd": [[92, "module-clawpack.pyclaw.limiters.tvd"]], "hyperbee_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.hyperbee_limiter"]], "limit() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.limit"]], "mc_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.mc_limiter"]], "minmod_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.minmod_limiter"]], "superbee_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.superbee_limiter"]], "superpower_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.superpower_limiter"]], "theta_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.theta_limiter"]], "upper_bound_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.upper_bound_limiter"]], "van_leer_klein_sharpening_limiter() (in module clawpack.pyclaw.limiters.tvd)": [[92, "clawpack.pyclaw.limiters.tvd.van_leer_klein_sharpening_limiter"]], "dimension (class in clawpack.pyclaw.geometry)": [[94, "clawpack.pyclaw.geometry.Dimension"]], "domain (class in clawpack.petclaw.geometry)": [[94, "clawpack.petclaw.geometry.Domain"]], "domain (class in clawpack.pyclaw.geometry)": [[94, "clawpack.pyclaw.geometry.Domain"]], "grid (class in clawpack.pyclaw.geometry)": [[94, "clawpack.pyclaw.geometry.Grid"]], "patch (class in clawpack.petclaw.geometry)": [[94, "clawpack.petclaw.geometry.Patch"]], "patch (class in clawpack.pyclaw.geometry)": [[94, "clawpack.pyclaw.geometry.Patch"]], "add_dimension() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.add_dimension"]], "add_dimension() (clawpack.pyclaw.geometry.patch method)": [[94, "clawpack.pyclaw.geometry.Patch.add_dimension"]], "add_gauges() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.add_gauges"]], "c_center() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.c_center"]], "c_centers (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.c_centers"]], "c_centers_with_ghost() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.c_centers_with_ghost"]], "c_nodes (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.c_nodes"]], "c_nodes_with_ghost() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.c_nodes_with_ghost"]], "centers (clawpack.pyclaw.geometry.dimension property)": [[94, "clawpack.pyclaw.geometry.Dimension.centers"]], "centers_with_ghost() (clawpack.pyclaw.geometry.dimension method)": [[94, "clawpack.pyclaw.geometry.Dimension.centers_with_ghost"]], "delta (clawpack.pyclaw.geometry.dimension property)": [[94, "clawpack.pyclaw.geometry.Dimension.delta"]], "delta (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.delta"]], "dimensional_split (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.dimensional_split"]], "dimensions (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.dimensions"]], "dimensions (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.dimensions"]], "fwave (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.fwave"]], "gauge_dir_name (clawpack.pyclaw.geometry.grid attribute)": [[94, "clawpack.pyclaw.geometry.Grid.gauge_dir_name"]], "gauge_file_names (clawpack.pyclaw.geometry.grid attribute)": [[94, "clawpack.pyclaw.geometry.Grid.gauge_file_names"]], "gauge_files (clawpack.pyclaw.geometry.grid attribute)": [[94, "clawpack.pyclaw.geometry.Grid.gauge_files"]], "gauges (clawpack.pyclaw.geometry.grid attribute)": [[94, "clawpack.pyclaw.geometry.Grid.gauges"]], "get_dim_attribute() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.get_dim_attribute"]], "get_dim_attribute() (clawpack.pyclaw.geometry.patch method)": [[94, "clawpack.pyclaw.geometry.Patch.get_dim_attribute"]], "grid (clawpack.pyclaw.geometry.domain property)": [[94, "clawpack.pyclaw.geometry.Domain.grid"]], "kernel_language (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.kernel_language"]], "level (clawpack.pyclaw.geometry.patch attribute)": [[94, "clawpack.pyclaw.geometry.Patch.level"]], "lower_global (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.lower_global"]], "mthlim (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.mthlim"]], "name (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.name"]], "nodes (clawpack.pyclaw.geometry.dimension property)": [[94, "clawpack.pyclaw.geometry.Dimension.nodes"]], "nodes_with_ghost() (clawpack.pyclaw.geometry.dimension method)": [[94, "clawpack.pyclaw.geometry.Dimension.nodes_with_ghost"]], "num_cells_global (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.num_cells_global"]], "num_dim (clawpack.pyclaw.geometry.domain property)": [[94, "clawpack.pyclaw.geometry.Domain.num_dim"]], "num_dim (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.num_dim"]], "num_dim (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.num_dim"]], "order (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.order"]], "p_center() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.p_center"]], "p_centers (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.p_centers"]], "p_nodes (clawpack.pyclaw.geometry.grid property)": [[94, "clawpack.pyclaw.geometry.Grid.p_nodes"]], "patch (clawpack.pyclaw.geometry.domain property)": [[94, "clawpack.pyclaw.geometry.Domain.patch"]], "patch_index (clawpack.pyclaw.geometry.patch attribute)": [[94, "clawpack.pyclaw.geometry.Patch.patch_index"]], "plot() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.plot"]], "setup_gauge_files() (clawpack.pyclaw.geometry.grid method)": [[94, "clawpack.pyclaw.geometry.Grid.setup_gauge_files"]], "source_split (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.source_split"]], "step_source (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.step_source"]], "transverse_waves (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.transverse_waves"]], "upper_global (clawpack.pyclaw.geometry.patch property)": [[94, "clawpack.pyclaw.geometry.Patch.upper_global"]], "verbosity (clawpack.petclaw.geometry.domain attribute)": [[94, "clawpack.petclaw.geometry.Domain.verbosity"]], "clawpack.pyclaw.fileio.ascii": [[97, "module-clawpack.pyclaw.fileio.ascii"]], "clawpack.pyclaw.fileio.binary": [[97, "module-clawpack.pyclaw.fileio.binary"]], "clawpack.pyclaw.fileio.hdf5": [[97, "module-clawpack.pyclaw.fileio.hdf5"]], "clawpack.pyclaw.fileio.netcdf": [[97, "module-clawpack.pyclaw.fileio.netcdf"]], "read() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.read"]], "read() (in module clawpack.pyclaw.fileio.binary)": [[97, "clawpack.pyclaw.fileio.binary.read"]], "read() (in module clawpack.pyclaw.fileio.hdf5)": [[97, "clawpack.pyclaw.fileio.hdf5.read"]], "read() (in module clawpack.pyclaw.fileio.netcdf)": [[97, "clawpack.pyclaw.fileio.netcdf.read"]], "read_array() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.read_array"]], "read_patch_header() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.read_patch_header"]], "read_t() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.read_t"]], "write() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.write"]], "write() (in module clawpack.pyclaw.fileio.hdf5)": [[97, "clawpack.pyclaw.fileio.hdf5.write"]], "write() (in module clawpack.pyclaw.fileio.netcdf)": [[97, "clawpack.pyclaw.fileio.netcdf.write"]], "write_array() (in module clawpack.pyclaw.fileio.ascii)": [[97, "clawpack.pyclaw.fileio.ascii.write_array"]], "acoustics_1d() (in module clawpack.riemann.acoustics_1d_py)": [[102, "clawpack.riemann.acoustics_1D_py.acoustics_1D"]], "advection_1d() (in module clawpack.riemann.advection_1d_py)": [[102, "clawpack.riemann.advection_1D_py.advection_1D"]], "burgers_1d() (in module clawpack.riemann.burgers_1d_py)": [[102, "clawpack.riemann.burgers_1D_py.burgers_1D"]], "clawpack.riemann.acoustics_1d_py": [[102, "module-clawpack.riemann.acoustics_1D_py"]], "clawpack.riemann.advection_1d_py": [[102, "module-clawpack.riemann.advection_1D_py"]], "clawpack.riemann.burgers_1d_py": [[102, "module-clawpack.riemann.burgers_1D_py"]], "clawpack.riemann.euler_1d_py": [[102, "module-clawpack.riemann.euler_1D_py"]], "clawpack.riemann.shallow_1d_py": [[102, "module-clawpack.riemann.shallow_1D_py"]], "euler_exact_1d() (in module clawpack.riemann.euler_1d_py)": [[102, "clawpack.riemann.euler_1D_py.euler_exact_1D"]], "euler_hll_1d() (in module clawpack.riemann.euler_1d_py)": [[102, "clawpack.riemann.euler_1D_py.euler_hll_1D"]], "euler_hllc_1d() (in module clawpack.riemann.euler_1d_py)": [[102, "clawpack.riemann.euler_1D_py.euler_hllc_1D"]], "euler_roe_1d() (in module clawpack.riemann.euler_1d_py)": [[102, "clawpack.riemann.euler_1D_py.euler_roe_1D"]], "shallow_exact_1d() (in module clawpack.riemann.shallow_1d_py)": [[102, "clawpack.riemann.shallow_1D_py.shallow_exact_1D"]], "shallow_fwave_1d() (in module clawpack.riemann.shallow_1d_py)": [[102, "clawpack.riemann.shallow_1D_py.shallow_fwave_1d"]], "shallow_hll_1d() (in module clawpack.riemann.shallow_1d_py)": [[102, "clawpack.riemann.shallow_1D_py.shallow_hll_1D"]], "shallow_roe_1d() (in module clawpack.riemann.shallow_1d_py)": [[102, "clawpack.riemann.shallow_1D_py.shallow_roe_1D"]], "solution (class in clawpack.pyclaw.solution)": [[103, "clawpack.pyclaw.solution.Solution"]], "is_valid() (clawpack.pyclaw.solution.solution method)": [[103, "clawpack.pyclaw.solution.Solution.is_valid"]], "patch (clawpack.pyclaw.solution.solution property)": [[103, "clawpack.pyclaw.solution.Solution.patch"]], "plot() (clawpack.pyclaw.solution.solution method)": [[103, "clawpack.pyclaw.solution.Solution.plot"]], "read() (clawpack.pyclaw.solution.solution method)": [[103, "clawpack.pyclaw.solution.Solution.read"]], "set_all_states() (clawpack.pyclaw.solution.solution method)": [[103, "clawpack.pyclaw.solution.Solution.set_all_states"]], "start_frame (clawpack.pyclaw.solution.solution property)": [[103, "clawpack.pyclaw.solution.Solution.start_frame"]], "state (clawpack.pyclaw.solution.solution property)": [[103, "clawpack.pyclaw.solution.Solution.state"]], "write() (clawpack.pyclaw.solution.solution method)": [[103, "clawpack.pyclaw.solution.Solution.write"]], "clawsolver (class in clawpack.pyclaw.classic.solver)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver"]], "sharpclawsolver (class in clawpack.pyclaw.sharpclaw.solver)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver"]], "accept_reject_step() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.accept_reject_step"]], "aux_time_dep (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.aux_time_dep"]], "call_before_step_each_stage (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.call_before_step_each_stage"]], "cfl_desired (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.cfl_desired"]], "cfl_max (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.cfl_max"]], "char_decomp (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.char_decomp"]], "check_3rd_ord_cond() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.check_3rd_ord_cond"]], "dq() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.dq"]], "dq_src (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.dq_src"]], "dqdt() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.dqdt"]], "fwave (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.fwave"]], "fwave (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.fwave"]], "get_dt_new() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.get_dt_new"]], "kernel_language (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.kernel_language"]], "kernel_language (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.kernel_language"]], "lim_type (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.lim_type"]], "mthlim (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.mthlim"]], "num_ghost (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.num_ghost"]], "order (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.order"]], "setup() (clawpack.pyclaw.classic.solver.clawsolver method)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.setup"]], "setup() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.setup"]], "source_split (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.source_split"]], "step() (clawpack.pyclaw.classic.solver.clawsolver method)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.step"]], "step() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.step"]], "step_hyperbolic() (clawpack.pyclaw.classic.solver.clawsolver method)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.step_hyperbolic"]], "step_source (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.step_source"]], "tfluct (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.tfluct"]], "tfluct_solver (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.tfluct_solver"]], "time_integrator (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.time_integrator"]], "update_saved_values() (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver method)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.update_saved_values"]], "verbosity (clawpack.pyclaw.classic.solver.clawsolver attribute)": [[104, "clawpack.pyclaw.classic.solver.ClawSolver.verbosity"]], "weno_order (clawpack.pyclaw.sharpclaw.solver.sharpclawsolver attribute)": [[104, "clawpack.pyclaw.sharpclaw.solver.SharpClawSolver.weno_order"]], "f (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.F"]], "f (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.F"]], "state (class in clawpack.petclaw.state)": [[106, "clawpack.petclaw.state.State"]], "state (class in clawpack.pyclaw.state)": [[106, "clawpack.pyclaw.state.State"]], "aux (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.aux"]], "fset (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.fset"]], "gauge_data (clawpack.petclaw.state.state attribute)": [[106, "clawpack.petclaw.state.State.gauge_data"]], "gauge_data (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.gauge_data"]], "get_aux_global() (clawpack.petclaw.state.state method)": [[106, "clawpack.petclaw.state.State.get_aux_global"]], "get_aux_global() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.get_aux_global"]], "get_auxbc_from_aux() (clawpack.petclaw.state.state method)": [[106, "clawpack.petclaw.state.State.get_auxbc_from_aux"]], "get_auxbc_from_aux() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.get_auxbc_from_aux"]], "get_q_global() (clawpack.petclaw.state.state method)": [[106, "clawpack.petclaw.state.State.get_q_global"]], "get_q_global() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.get_q_global"]], "get_qbc_from_q() (clawpack.petclaw.state.state method)": [[106, "clawpack.petclaw.state.State.get_qbc_from_q"]], "get_qbc_from_q() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.get_qbc_from_q"]], "is_valid() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.is_valid"]], "keep_gauges (clawpack.petclaw.state.state attribute)": [[106, "clawpack.petclaw.state.State.keep_gauges"]], "keep_gauges (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.keep_gauges"]], "mf (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.mF"]], "mf (clawpack.pyclaw.state.state property)": [[106, "clawpack.pyclaw.state.State.mF"]], "mp (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.mp"]], "mp (clawpack.pyclaw.state.state property)": [[106, "clawpack.pyclaw.state.State.mp"]], "num_aux (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.num_aux"]], "num_aux (clawpack.pyclaw.state.state property)": [[106, "clawpack.pyclaw.state.State.num_aux"]], "num_eqn (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.num_eqn"]], "num_eqn (clawpack.pyclaw.state.state property)": [[106, "clawpack.pyclaw.state.State.num_eqn"]], "p (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.p"]], "p (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.p"]], "problem_data (clawpack.petclaw.state.state attribute)": [[106, "clawpack.petclaw.state.State.problem_data"]], "problem_data (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.problem_data"]], "q (clawpack.petclaw.state.state property)": [[106, "clawpack.petclaw.state.State.q"]], "set_aux_from_auxbc() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.set_aux_from_auxbc"]], "set_cparam() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.set_cparam"]], "set_num_ghost() (clawpack.petclaw.state.state method)": [[106, "clawpack.petclaw.state.State.set_num_ghost"]], "set_num_ghost() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.set_num_ghost"]], "set_q_from_qbc() (clawpack.pyclaw.state.state method)": [[106, "clawpack.pyclaw.state.State.set_q_from_qbc"]], "t (clawpack.petclaw.state.state attribute)": [[106, "clawpack.petclaw.state.State.t"]], "t (clawpack.pyclaw.state.state attribute)": [[106, "clawpack.pyclaw.state.State.t"]], "framecounter (class in clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.FrameCounter"]], "verifyerror": [[109, "clawpack.pyclaw.util.VerifyError"]], "add_parent_doc() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.add_parent_doc"]], "check_diff() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.check_diff"]], "clawpack.pyclaw.util": [[109, "module-clawpack.pyclaw.util"]], "compile_library() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.compile_library"]], "construct_function_handle() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.construct_function_handle"]], "convert_fort_double_to_float() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.convert_fort_double_to_float"]], "gen_variants() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.gen_variants"]], "get_counter() (clawpack.pyclaw.util.framecounter method)": [[109, "clawpack.pyclaw.util.FrameCounter.get_counter"]], "increment() (clawpack.pyclaw.util.framecounter method)": [[109, "clawpack.pyclaw.util.FrameCounter.increment"]], "read_data_line() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.read_data_line"]], "reset_counter() (clawpack.pyclaw.util.framecounter method)": [[109, "clawpack.pyclaw.util.FrameCounter.reset_counter"]], "run_app_from_main() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.run_app_from_main"]], "run_serialized() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.run_serialized"]], "set_counter() (clawpack.pyclaw.util.framecounter method)": [[109, "clawpack.pyclaw.util.FrameCounter.set_counter"]], "test_app() (in module clawpack.pyclaw.util)": [[109, "clawpack.pyclaw.util.test_app"]], "nodataerror": [[158, "clawpack.geoclaw.surge.storm.NoDataError"]], "storm (class in clawpack.geoclaw.surge.storm)": [[158, "clawpack.geoclaw.surge.storm.Storm"]], "available_formats() (in module clawpack.geoclaw.surge.storm)": [[158, "clawpack.geoclaw.surge.storm.available_formats"]], "available_models() (in module clawpack.geoclaw.surge.storm)": [[158, "clawpack.geoclaw.surge.storm.available_models"]], "category() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.category"]], "clawpack.geoclaw.surge.storm": [[158, "module-clawpack.geoclaw.surge.storm"]], "fill_rad_w_other_source() (in module clawpack.geoclaw.surge.storm)": [[158, "clawpack.geoclaw.surge.storm.fill_rad_w_other_source"]], "make_multi_structure() (in module clawpack.geoclaw.surge.storm)": [[158, "clawpack.geoclaw.surge.storm.make_multi_structure"]], "read() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read"]], "read_atcf() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_atcf"]], "read_geoclaw() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_geoclaw"]], "read_hurdat() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_hurdat"]], "read_ibtracs() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_ibtracs"]], "read_imd() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_imd"]], "read_jma() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_jma"]], "read_tcvitals() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.read_tcvitals"]], "write() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write"]], "write_atcf() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_atcf"]], "write_geoclaw() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_geoclaw"]], "write_hurdat() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_hurdat"]], "write_imd() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_imd"]], "write_jma() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_jma"]], "write_tcvitals() (clawpack.geoclaw.surge.storm.storm method)": [[158, "clawpack.geoclaw.surge.storm.Storm.write_tcvitals"]], "topography (class in clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.Topography"]], "x (clawpack.geoclaw.topotools.topography property)": [[164, "clawpack.geoclaw.topotools.Topography.X"], [164, "clawpack.geoclaw.topotools.Topography.x"]], "y (clawpack.geoclaw.topotools.topography property)": [[164, "clawpack.geoclaw.topotools.Topography.Y"], [164, "clawpack.geoclaw.topotools.Topography.y"]], "z (clawpack.geoclaw.topotools.topography property)": [[164, "clawpack.geoclaw.topotools.Topography.Z"], [164, "clawpack.geoclaw.topotools.Topography.z"]], "clawpack.geoclaw.topotools": [[164, "module-clawpack.geoclaw.topotools"]], "create_topo_func() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.create_topo_func"]], "crop() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.crop"]], "delta (clawpack.geoclaw.topotools.topography property)": [[164, "clawpack.geoclaw.topotools.Topography.delta"]], "determine_topo_type() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.determine_topo_type"]], "extent (clawpack.geoclaw.topotools.topography property)": [[164, "clawpack.geoclaw.topotools.Topography.extent"]], "fetch_topo_url() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.fetch_topo_url"]], "generate_2d_coordinates() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.generate_2d_coordinates"]], "generate_2d_topo() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.generate_2d_topo"]], "get_topo() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.get_topo"]], "in_poly() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.in_poly"]], "interp_unstructured() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.interp_unstructured"]], "make_shoreline_xy() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.make_shoreline_xy"]], "plot() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.plot"]], "read() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.read"]], "read_header() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.read_header"]], "read_netcdf() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.read_netcdf"]], "replace_no_data_values() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.replace_no_data_values"]], "replace_values() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.replace_values"]], "set_xyz() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.set_xyZ"]], "smooth_data() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.smooth_data"]], "swapheader() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.swapheader"]], "topo1writer() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.topo1writer"]], "topo2writer() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.topo2writer"]], "topo3writer() (in module clawpack.geoclaw.topotools)": [[164, "clawpack.geoclaw.topotools.topo3writer"]], "write() (clawpack.geoclaw.topotools.topography method)": [[164, "clawpack.geoclaw.topotools.Topography.write"]]}})
\ No newline at end of file
diff --git a/v5.7.x/.buildinfo b/v5.7.x/.buildinfo
index 425800fea..7349f68d5 100644
--- a/v5.7.x/.buildinfo
+++ b/v5.7.x/.buildinfo
@@ -1,4 +1,4 @@
 # Sphinx build info version 1
 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: df02c833bda747614d0e40a521e115be
+config: 943d7b659812a867bc2bc712bde0a95d
 tags: 645f666f9bcd5a90fca523b33c5a78b7
diff --git a/v5.7.x/.doctrees/ClawPlotAxes.doctree b/v5.7.x/.doctrees/ClawPlotAxes.doctree
index 5f47c9b62..61946fa96 100644
Binary files a/v5.7.x/.doctrees/ClawPlotAxes.doctree and b/v5.7.x/.doctrees/ClawPlotAxes.doctree differ
diff --git a/v5.7.x/.doctrees/ClawPlotData.doctree b/v5.7.x/.doctrees/ClawPlotData.doctree
index 19cde928a..92c44d246 100644
Binary files a/v5.7.x/.doctrees/ClawPlotData.doctree and b/v5.7.x/.doctrees/ClawPlotData.doctree differ
diff --git a/v5.7.x/.doctrees/ClawPlotFigure.doctree b/v5.7.x/.doctrees/ClawPlotFigure.doctree
index 6f8df63a7..c9d6fd575 100644
Binary files a/v5.7.x/.doctrees/ClawPlotFigure.doctree and b/v5.7.x/.doctrees/ClawPlotFigure.doctree differ
diff --git a/v5.7.x/.doctrees/ClawPlotItem.doctree b/v5.7.x/.doctrees/ClawPlotItem.doctree
index 51e2e1ee4..c9e893a39 100644
Binary files a/v5.7.x/.doctrees/ClawPlotItem.doctree and b/v5.7.x/.doctrees/ClawPlotItem.doctree differ
diff --git a/v5.7.x/.doctrees/about.doctree b/v5.7.x/.doctrees/about.doctree
index e74b3c1c7..aed995535 100644
Binary files a/v5.7.x/.doctrees/about.doctree and b/v5.7.x/.doctrees/about.doctree differ
diff --git a/v5.7.x/.doctrees/adjoint.doctree b/v5.7.x/.doctrees/adjoint.doctree
index fe82cc3dd..d3d39a901 100644
Binary files a/v5.7.x/.doctrees/adjoint.doctree and b/v5.7.x/.doctrees/adjoint.doctree differ
diff --git a/v5.7.x/.doctrees/amr_algorithm.doctree b/v5.7.x/.doctrees/amr_algorithm.doctree
index f84c75fc4..6d901a098 100644
Binary files a/v5.7.x/.doctrees/amr_algorithm.doctree and b/v5.7.x/.doctrees/amr_algorithm.doctree differ
diff --git a/v5.7.x/.doctrees/amrclaw.doctree b/v5.7.x/.doctrees/amrclaw.doctree
index 3cd04b2e1..76b1843cb 100644
Binary files a/v5.7.x/.doctrees/amrclaw.doctree and b/v5.7.x/.doctrees/amrclaw.doctree differ
diff --git a/v5.7.x/.doctrees/amrclaw1d.doctree b/v5.7.x/.doctrees/amrclaw1d.doctree
index ecfb1a391..272c1c83a 100644
Binary files a/v5.7.x/.doctrees/amrclaw1d.doctree and b/v5.7.x/.doctrees/amrclaw1d.doctree differ
diff --git a/v5.7.x/.doctrees/amrclaw_doxygen.doctree b/v5.7.x/.doctrees/amrclaw_doxygen.doctree
index a244ba3e1..cb876d1c2 100644
Binary files a/v5.7.x/.doctrees/amrclaw_doxygen.doctree and b/v5.7.x/.doctrees/amrclaw_doxygen.doctree differ
diff --git a/v5.7.x/.doctrees/amrclaw_flowcharts.doctree b/v5.7.x/.doctrees/amrclaw_flowcharts.doctree
index 56277273d..643b72cd9 100644
Binary files a/v5.7.x/.doctrees/amrclaw_flowcharts.doctree and b/v5.7.x/.doctrees/amrclaw_flowcharts.doctree differ
diff --git a/v5.7.x/.doctrees/application_documentation.doctree b/v5.7.x/.doctrees/application_documentation.doctree
index cfc25b300..aee159183 100644
Binary files a/v5.7.x/.doctrees/application_documentation.doctree and b/v5.7.x/.doctrees/application_documentation.doctree differ
diff --git a/v5.7.x/.doctrees/apps.doctree b/v5.7.x/.doctrees/apps.doctree
index 4b5ee9fad..e57235dda 100644
Binary files a/v5.7.x/.doctrees/apps.doctree and b/v5.7.x/.doctrees/apps.doctree differ
diff --git a/v5.7.x/.doctrees/aws.doctree b/v5.7.x/.doctrees/aws.doctree
index bf5a13cd2..41c880d96 100644
Binary files a/v5.7.x/.doctrees/aws.doctree and b/v5.7.x/.doctrees/aws.doctree differ
diff --git a/v5.7.x/.doctrees/b4run.doctree b/v5.7.x/.doctrees/b4run.doctree
index 37f37b4fb..f44fcbdfc 100644
Binary files a/v5.7.x/.doctrees/b4run.doctree and b/v5.7.x/.doctrees/b4run.doctree differ
diff --git a/v5.7.x/.doctrees/b4step_defaults.doctree b/v5.7.x/.doctrees/b4step_defaults.doctree
index 795fd7743..27fae229f 100644
Binary files a/v5.7.x/.doctrees/b4step_defaults.doctree and b/v5.7.x/.doctrees/b4step_defaults.doctree differ
diff --git a/v5.7.x/.doctrees/bc.doctree b/v5.7.x/.doctrees/bc.doctree
index e3f2cb105..b43b85deb 100644
Binary files a/v5.7.x/.doctrees/bc.doctree and b/v5.7.x/.doctrees/bc.doctree differ
diff --git a/v5.7.x/.doctrees/biblio.doctree b/v5.7.x/.doctrees/biblio.doctree
index b7f3ccb7b..b6cc82029 100644
Binary files a/v5.7.x/.doctrees/biblio.doctree and b/v5.7.x/.doctrees/biblio.doctree differ
diff --git a/v5.7.x/.doctrees/changes_to_master.doctree b/v5.7.x/.doctrees/changes_to_master.doctree
index bb0d230e0..8ea88e4dd 100644
Binary files a/v5.7.x/.doctrees/changes_to_master.doctree and b/v5.7.x/.doctrees/changes_to_master.doctree differ
diff --git a/v5.7.x/.doctrees/claw43to46.doctree b/v5.7.x/.doctrees/claw43to46.doctree
index fa83b8b26..bcfda5300 100644
Binary files a/v5.7.x/.doctrees/claw43to46.doctree and b/v5.7.x/.doctrees/claw43to46.doctree differ
diff --git a/v5.7.x/.doctrees/claw46to50.doctree b/v5.7.x/.doctrees/claw46to50.doctree
index d02b10014..f951f4c89 100644
Binary files a/v5.7.x/.doctrees/claw46to50.doctree and b/v5.7.x/.doctrees/claw46to50.doctree differ
diff --git a/v5.7.x/.doctrees/claw4x.doctree b/v5.7.x/.doctrees/claw4x.doctree
index 660edc847..45c1fbe29 100644
Binary files a/v5.7.x/.doctrees/claw4x.doctree and b/v5.7.x/.doctrees/claw4x.doctree differ
diff --git a/v5.7.x/.doctrees/clawpack5.doctree b/v5.7.x/.doctrees/clawpack5.doctree
index edf0c94e8..4ef362804 100644
Binary files a/v5.7.x/.doctrees/clawpack5.doctree and b/v5.7.x/.doctrees/clawpack5.doctree differ
diff --git a/v5.7.x/.doctrees/clawpack_components.doctree b/v5.7.x/.doctrees/clawpack_components.doctree
index b4040afc5..f0af5efa5 100644
Binary files a/v5.7.x/.doctrees/clawpack_components.doctree and b/v5.7.x/.doctrees/clawpack_components.doctree differ
diff --git a/v5.7.x/.doctrees/community.doctree b/v5.7.x/.doctrees/community.doctree
index eefe64e6e..b713bddf3 100644
Binary files a/v5.7.x/.doctrees/community.doctree and b/v5.7.x/.doctrees/community.doctree differ
diff --git a/v5.7.x/.doctrees/contents.doctree b/v5.7.x/.doctrees/contents.doctree
index e5b34fe1f..e9bb8e7df 100644
Binary files a/v5.7.x/.doctrees/contents.doctree and b/v5.7.x/.doctrees/contents.doctree differ
diff --git a/v5.7.x/.doctrees/contribute_apps.doctree b/v5.7.x/.doctrees/contribute_apps.doctree
index 3e281aee8..42f5e6aa8 100644
Binary files a/v5.7.x/.doctrees/contribute_apps.doctree and b/v5.7.x/.doctrees/contribute_apps.doctree differ
diff --git a/v5.7.x/.doctrees/current_data.doctree b/v5.7.x/.doctrees/current_data.doctree
index a79df58ce..d77638146 100644
Binary files a/v5.7.x/.doctrees/current_data.doctree and b/v5.7.x/.doctrees/current_data.doctree differ
diff --git a/v5.7.x/.doctrees/developers.doctree b/v5.7.x/.doctrees/developers.doctree
index 2e1101b30..2c76f4967 100644
Binary files a/v5.7.x/.doctrees/developers.doctree and b/v5.7.x/.doctrees/developers.doctree differ
diff --git a/v5.7.x/.doctrees/docker_image.doctree b/v5.7.x/.doctrees/docker_image.doctree
index 01a038acd..2cd6aa8b1 100644
Binary files a/v5.7.x/.doctrees/docker_image.doctree and b/v5.7.x/.doctrees/docker_image.doctree differ
diff --git a/v5.7.x/.doctrees/dtopotools_module.doctree b/v5.7.x/.doctrees/dtopotools_module.doctree
index 3051e9a0a..87ef7b5b1 100644
Binary files a/v5.7.x/.doctrees/dtopotools_module.doctree and b/v5.7.x/.doctrees/dtopotools_module.doctree differ
diff --git a/v5.7.x/.doctrees/environment.pickle b/v5.7.x/.doctrees/environment.pickle
index 3e8f5b6dc..95dd7f9b8 100644
Binary files a/v5.7.x/.doctrees/environment.pickle and b/v5.7.x/.doctrees/environment.pickle differ
diff --git a/v5.7.x/.doctrees/f77_vs_f90.doctree b/v5.7.x/.doctrees/f77_vs_f90.doctree
index f3743a8e2..4d8c7e858 100644
Binary files a/v5.7.x/.doctrees/f77_vs_f90.doctree and b/v5.7.x/.doctrees/f77_vs_f90.doctree differ
diff --git a/v5.7.x/.doctrees/fgmax.doctree b/v5.7.x/.doctrees/fgmax.doctree
index f37430e68..6a0c2ce7e 100644
Binary files a/v5.7.x/.doctrees/fgmax.doctree and b/v5.7.x/.doctrees/fgmax.doctree differ
diff --git a/v5.7.x/.doctrees/fgmax_tools_module.doctree b/v5.7.x/.doctrees/fgmax_tools_module.doctree
index dbed3622a..dc2e0edf8 100644
Binary files a/v5.7.x/.doctrees/fgmax_tools_module.doctree and b/v5.7.x/.doctrees/fgmax_tools_module.doctree differ
diff --git a/v5.7.x/.doctrees/fgout.doctree b/v5.7.x/.doctrees/fgout.doctree
index acba666b9..caa3e1f2c 100644
Binary files a/v5.7.x/.doctrees/fgout.doctree and b/v5.7.x/.doctrees/fgout.doctree differ
diff --git a/v5.7.x/.doctrees/first_run.doctree b/v5.7.x/.doctrees/first_run.doctree
index 66a2ca3c4..31baa3ef4 100644
Binary files a/v5.7.x/.doctrees/first_run.doctree and b/v5.7.x/.doctrees/first_run.doctree differ
diff --git a/v5.7.x/.doctrees/first_run_fortran.doctree b/v5.7.x/.doctrees/first_run_fortran.doctree
index 7dec50f4b..95da407a0 100644
Binary files a/v5.7.x/.doctrees/first_run_fortran.doctree and b/v5.7.x/.doctrees/first_run_fortran.doctree differ
diff --git a/v5.7.x/.doctrees/first_run_pyclaw.doctree b/v5.7.x/.doctrees/first_run_pyclaw.doctree
index 40c4510a9..7d87d95d6 100644
Binary files a/v5.7.x/.doctrees/first_run_pyclaw.doctree and b/v5.7.x/.doctrees/first_run_pyclaw.doctree differ
diff --git a/v5.7.x/.doctrees/flagregions.doctree b/v5.7.x/.doctrees/flagregions.doctree
index 13e6fd4c3..ce2307a83 100644
Binary files a/v5.7.x/.doctrees/flagregions.doctree and b/v5.7.x/.doctrees/flagregions.doctree differ
diff --git a/v5.7.x/.doctrees/force_dry.doctree b/v5.7.x/.doctrees/force_dry.doctree
index 38c4b5c2a..55fc98e23 100644
Binary files a/v5.7.x/.doctrees/force_dry.doctree and b/v5.7.x/.doctrees/force_dry.doctree differ
diff --git a/v5.7.x/.doctrees/fortran.doctree b/v5.7.x/.doctrees/fortran.doctree
index 43030ecdd..45fe208cf 100644
Binary files a/v5.7.x/.doctrees/fortran.doctree and b/v5.7.x/.doctrees/fortran.doctree differ
diff --git a/v5.7.x/.doctrees/fortran_compilers.doctree b/v5.7.x/.doctrees/fortran_compilers.doctree
index c3e75126e..bfd3c2816 100644
Binary files a/v5.7.x/.doctrees/fortran_compilers.doctree and b/v5.7.x/.doctrees/fortran_compilers.doctree differ
diff --git a/v5.7.x/.doctrees/fvmbook.doctree b/v5.7.x/.doctrees/fvmbook.doctree
index b047e63cd..6a706a37b 100644
Binary files a/v5.7.x/.doctrees/fvmbook.doctree and b/v5.7.x/.doctrees/fvmbook.doctree differ
diff --git a/v5.7.x/.doctrees/galleries.doctree b/v5.7.x/.doctrees/galleries.doctree
index 2a39c9d8d..9e547b227 100644
Binary files a/v5.7.x/.doctrees/galleries.doctree and b/v5.7.x/.doctrees/galleries.doctree differ
diff --git a/v5.7.x/.doctrees/gauges.doctree b/v5.7.x/.doctrees/gauges.doctree
index 030d81c7c..39241eb69 100644
Binary files a/v5.7.x/.doctrees/gauges.doctree and b/v5.7.x/.doctrees/gauges.doctree differ
diff --git a/v5.7.x/.doctrees/geoclaw.doctree b/v5.7.x/.doctrees/geoclaw.doctree
index 3d49c0cc0..c6fee3f89 100644
Binary files a/v5.7.x/.doctrees/geoclaw.doctree and b/v5.7.x/.doctrees/geoclaw.doctree differ
diff --git a/v5.7.x/.doctrees/geoclaw_started.doctree b/v5.7.x/.doctrees/geoclaw_started.doctree
index 48cd2642b..c3f22d1c7 100644
Binary files a/v5.7.x/.doctrees/geoclaw_started.doctree and b/v5.7.x/.doctrees/geoclaw_started.doctree differ
diff --git a/v5.7.x/.doctrees/geoclaw_util_module.doctree b/v5.7.x/.doctrees/geoclaw_util_module.doctree
index c6ea44119..5d61aedfd 100644
Binary files a/v5.7.x/.doctrees/geoclaw_util_module.doctree and b/v5.7.x/.doctrees/geoclaw_util_module.doctree differ
diff --git a/v5.7.x/.doctrees/geohints.doctree b/v5.7.x/.doctrees/geohints.doctree
index 52ed0cca7..75fe56a94 100644
Binary files a/v5.7.x/.doctrees/geohints.doctree and b/v5.7.x/.doctrees/geohints.doctree differ
diff --git a/v5.7.x/.doctrees/geoplot.doctree b/v5.7.x/.doctrees/geoplot.doctree
index 4dc38c9e1..e0077cfc5 100644
Binary files a/v5.7.x/.doctrees/geoplot.doctree and b/v5.7.x/.doctrees/geoplot.doctree differ
diff --git a/v5.7.x/.doctrees/git_versions.doctree b/v5.7.x/.doctrees/git_versions.doctree
index 028e0cd1f..62c684a34 100644
Binary files a/v5.7.x/.doctrees/git_versions.doctree and b/v5.7.x/.doctrees/git_versions.doctree differ
diff --git a/v5.7.x/.doctrees/googleearth_plotting.doctree b/v5.7.x/.doctrees/googleearth_plotting.doctree
index 485397b66..fa069758b 100644
Binary files a/v5.7.x/.doctrees/googleearth_plotting.doctree and b/v5.7.x/.doctrees/googleearth_plotting.doctree differ
diff --git a/v5.7.x/.doctrees/gpu.doctree b/v5.7.x/.doctrees/gpu.doctree
index 829fd43f2..365ac1f26 100644
Binary files a/v5.7.x/.doctrees/gpu.doctree and b/v5.7.x/.doctrees/gpu.doctree differ
diff --git a/v5.7.x/.doctrees/grid_registration.doctree b/v5.7.x/.doctrees/grid_registration.doctree
index 437ccc5e3..a62df689a 100644
Binary files a/v5.7.x/.doctrees/grid_registration.doctree and b/v5.7.x/.doctrees/grid_registration.doctree differ
diff --git a/v5.7.x/.doctrees/howto_doc.doctree b/v5.7.x/.doctrees/howto_doc.doctree
index 2c338558f..0e6fffc1e 100644
Binary files a/v5.7.x/.doctrees/howto_doc.doctree and b/v5.7.x/.doctrees/howto_doc.doctree differ
diff --git a/v5.7.x/.doctrees/howto_release.doctree b/v5.7.x/.doctrees/howto_release.doctree
index d69ab3559..25c73563b 100644
Binary files a/v5.7.x/.doctrees/howto_release.doctree and b/v5.7.x/.doctrees/howto_release.doctree differ
diff --git a/v5.7.x/.doctrees/installing.doctree b/v5.7.x/.doctrees/installing.doctree
index 4597aa30c..3283e234e 100644
Binary files a/v5.7.x/.doctrees/installing.doctree and b/v5.7.x/.doctrees/installing.doctree differ
diff --git a/v5.7.x/.doctrees/installing_more_options.doctree b/v5.7.x/.doctrees/installing_more_options.doctree
index a7a7dc055..4debe163f 100644
Binary files a/v5.7.x/.doctrees/installing_more_options.doctree and b/v5.7.x/.doctrees/installing_more_options.doctree differ
diff --git a/v5.7.x/.doctrees/installing_pip.doctree b/v5.7.x/.doctrees/installing_pip.doctree
index 66c482546..6836a6471 100644
Binary files a/v5.7.x/.doctrees/installing_pip.doctree and b/v5.7.x/.doctrees/installing_pip.doctree differ
diff --git a/v5.7.x/.doctrees/kmltools_module.doctree b/v5.7.x/.doctrees/kmltools_module.doctree
index 48fd3063a..33392bced 100644
Binary files a/v5.7.x/.doctrees/kmltools_module.doctree and b/v5.7.x/.doctrees/kmltools_module.doctree differ
diff --git a/v5.7.x/.doctrees/lagrangian_gauges.doctree b/v5.7.x/.doctrees/lagrangian_gauges.doctree
index f3ff73afa..d0c7f7139 100644
Binary files a/v5.7.x/.doctrees/lagrangian_gauges.doctree and b/v5.7.x/.doctrees/lagrangian_gauges.doctree differ
diff --git a/v5.7.x/.doctrees/license.doctree b/v5.7.x/.doctrees/license.doctree
index 5e8839230..f431a55db 100644
Binary files a/v5.7.x/.doctrees/license.doctree and b/v5.7.x/.doctrees/license.doctree differ
diff --git a/v5.7.x/.doctrees/makefiles.doctree b/v5.7.x/.doctrees/makefiles.doctree
index 04f6362c6..2eab4c898 100644
Binary files a/v5.7.x/.doctrees/makefiles.doctree and b/v5.7.x/.doctrees/makefiles.doctree differ
diff --git a/v5.7.x/.doctrees/makefiles_library.doctree b/v5.7.x/.doctrees/makefiles_library.doctree
index 08c5bdf2b..4c60d318b 100644
Binary files a/v5.7.x/.doctrees/makefiles_library.doctree and b/v5.7.x/.doctrees/makefiles_library.doctree differ
diff --git a/v5.7.x/.doctrees/manning.doctree b/v5.7.x/.doctrees/manning.doctree
index 30c33a567..ca35aaa2b 100644
Binary files a/v5.7.x/.doctrees/manning.doctree and b/v5.7.x/.doctrees/manning.doctree differ
diff --git a/v5.7.x/.doctrees/mapc2p.doctree b/v5.7.x/.doctrees/mapc2p.doctree
index 75da36d49..9aedb91ab 100644
Binary files a/v5.7.x/.doctrees/mapc2p.doctree and b/v5.7.x/.doctrees/mapc2p.doctree differ
diff --git a/v5.7.x/.doctrees/marching_front.doctree b/v5.7.x/.doctrees/marching_front.doctree
index c7109a99a..f95793ede 100644
Binary files a/v5.7.x/.doctrees/marching_front.doctree and b/v5.7.x/.doctrees/marching_front.doctree differ
diff --git a/v5.7.x/.doctrees/matlab_plotting.doctree b/v5.7.x/.doctrees/matlab_plotting.doctree
index 9f59c2aa3..9d3efa4a3 100644
Binary files a/v5.7.x/.doctrees/matlab_plotting.doctree and b/v5.7.x/.doctrees/matlab_plotting.doctree differ
diff --git a/v5.7.x/.doctrees/netcdf.doctree b/v5.7.x/.doctrees/netcdf.doctree
index fadfe7d4a..8af6bb9bb 100644
Binary files a/v5.7.x/.doctrees/netcdf.doctree and b/v5.7.x/.doctrees/netcdf.doctree differ
diff --git a/v5.7.x/.doctrees/newapp.doctree b/v5.7.x/.doctrees/newapp.doctree
index 6c7efcef1..279884c23 100644
Binary files a/v5.7.x/.doctrees/newapp.doctree and b/v5.7.x/.doctrees/newapp.doctree differ
diff --git a/v5.7.x/.doctrees/okada.doctree b/v5.7.x/.doctrees/okada.doctree
index 0ad3a94b3..3cb9aeddc 100644
Binary files a/v5.7.x/.doctrees/okada.doctree and b/v5.7.x/.doctrees/okada.doctree differ
diff --git a/v5.7.x/.doctrees/openmp.doctree b/v5.7.x/.doctrees/openmp.doctree
index 36df560f7..31375cb35 100644
Binary files a/v5.7.x/.doctrees/openmp.doctree and b/v5.7.x/.doctrees/openmp.doctree differ
diff --git a/v5.7.x/.doctrees/output_styles.doctree b/v5.7.x/.doctrees/output_styles.doctree
index 70b293f18..c5be653f4 100644
Binary files a/v5.7.x/.doctrees/output_styles.doctree and b/v5.7.x/.doctrees/output_styles.doctree differ
diff --git a/v5.7.x/.doctrees/packages.doctree b/v5.7.x/.doctrees/packages.doctree
index 194b964c7..7ab7ec8b2 100644
Binary files a/v5.7.x/.doctrees/packages.doctree and b/v5.7.x/.doctrees/packages.doctree differ
diff --git a/v5.7.x/.doctrees/photos.doctree b/v5.7.x/.doctrees/photos.doctree
index 47e96d688..c7e4fb8f4 100644
Binary files a/v5.7.x/.doctrees/photos.doctree and b/v5.7.x/.doctrees/photos.doctree differ
diff --git a/v5.7.x/.doctrees/plotexamples.doctree b/v5.7.x/.doctrees/plotexamples.doctree
index 8d6c1339f..16caf8b86 100644
Binary files a/v5.7.x/.doctrees/plotexamples.doctree and b/v5.7.x/.doctrees/plotexamples.doctree differ
diff --git a/v5.7.x/.doctrees/plotting.doctree b/v5.7.x/.doctrees/plotting.doctree
index 329609b16..2442c3034 100644
Binary files a/v5.7.x/.doctrees/plotting.doctree and b/v5.7.x/.doctrees/plotting.doctree differ
diff --git a/v5.7.x/.doctrees/plotting_faq.doctree b/v5.7.x/.doctrees/plotting_faq.doctree
index 8a8727845..98168f426 100644
Binary files a/v5.7.x/.doctrees/plotting_faq.doctree and b/v5.7.x/.doctrees/plotting_faq.doctree differ
diff --git a/v5.7.x/.doctrees/plotting_geoclaw.doctree b/v5.7.x/.doctrees/plotting_geoclaw.doctree
index 52640ec04..36341cfa7 100644
Binary files a/v5.7.x/.doctrees/plotting_geoclaw.doctree and b/v5.7.x/.doctrees/plotting_geoclaw.doctree differ
diff --git a/v5.7.x/.doctrees/plotting_python.doctree b/v5.7.x/.doctrees/plotting_python.doctree
index 11e6e97e6..4e5f3acf3 100644
Binary files a/v5.7.x/.doctrees/plotting_python.doctree and b/v5.7.x/.doctrees/plotting_python.doctree differ
diff --git a/v5.7.x/.doctrees/prereqs.doctree b/v5.7.x/.doctrees/prereqs.doctree
index 2d68bec32..625712f86 100644
Binary files a/v5.7.x/.doctrees/prereqs.doctree and b/v5.7.x/.doctrees/prereqs.doctree differ
diff --git a/v5.7.x/.doctrees/pyclaw/about.doctree b/v5.7.x/.doctrees/pyclaw/about.doctree
index ccdd33039..ef71ef035 100644
Binary files a/v5.7.x/.doctrees/pyclaw/about.doctree and b/v5.7.x/.doctrees/pyclaw/about.doctree differ
diff --git a/v5.7.x/.doctrees/pyclaw/basics.doctree b/v5.7.x/.doctrees/pyclaw/basics.doctree
index ff2f16b0f..a6b21c48a 100644
Binary files a/v5.7.x/.doctrees/pyclaw/basics.doctree and b/v5.7.x/.doctrees/pyclaw/basics.doctree differ
diff --git a/v5.7.x/.doctrees/pyclaw/classes.doctree b/v5.7.x/.doctrees/pyclaw/classes.doctree
index ca49cfacb..6a7c364d9 100644
Binary files a/v5.7.x/.doctrees/pyclaw/classes.doctree and b/v5.7.x/.doctrees/pyclaw/classes.doctree differ
diff --git a/v5.7.x/.doctrees/pyclaw/clawpack_and_pyclaw.doctree b/v5.7.x/.doctrees/pyclaw/clawpack_and_pyclaw.doctree
index 34d376de9..17397e802 100644
Binary files a/v5.7.x/.doctrees/pyclaw/clawpack_and_pyclaw.doctree and b/v5.7.x/.doctrees/pyclaw/clawpack_and_pyclaw.doctree differ
diff --git a/v5.7.x/.doctrees/pyclaw/cloud.doctree b/v5.7.x/.doctrees/pyclaw/cloud.doctree
index dd6615714..934d79b84 100644
Binary files a/v5.7.x/.doctrees/pyclaw/cloud.doctree and b/v5.7.x/.doctrees/pyclaw/cloud.doctree differ
diff --git a/v5.7.x/.doctrees/pyclaw/controller.doctree b/v5.7.x/.doctrees/pyclaw/controller.doctree
index ce5c659af..805a97b1f 100644
Binary files a/v5.7.x/.doctrees/pyclaw/controller.doctree and b/v5.7.x/.doctrees/pyclaw/controller.doctree differ
diff --git a/v5.7.x/.doctrees/pyclaw/evolve/limiters.doctree b/v5.7.x/.doctrees/pyclaw/evolve/limiters.doctree
index 247378a95..ab2a03834 100644
Binary files a/v5.7.x/.doctrees/pyclaw/evolve/limiters.doctree and b/v5.7.x/.doctrees/pyclaw/evolve/limiters.doctree differ
diff --git a/v5.7.x/.doctrees/pyclaw/examples.doctree b/v5.7.x/.doctrees/pyclaw/examples.doctree
index 7fafda792..19e653ccb 100644
Binary files a/v5.7.x/.doctrees/pyclaw/examples.doctree and b/v5.7.x/.doctrees/pyclaw/examples.doctree differ
diff --git a/v5.7.x/.doctrees/pyclaw/geometry.doctree b/v5.7.x/.doctrees/pyclaw/geometry.doctree
index b497f3ed7..5e206e952 100644
Binary files a/v5.7.x/.doctrees/pyclaw/geometry.doctree and b/v5.7.x/.doctrees/pyclaw/geometry.doctree differ
diff --git a/v5.7.x/.doctrees/pyclaw/going_further.doctree b/v5.7.x/.doctrees/pyclaw/going_further.doctree
index 1d47e79c4..3fa0bba93 100644
Binary files a/v5.7.x/.doctrees/pyclaw/going_further.doctree and b/v5.7.x/.doctrees/pyclaw/going_further.doctree differ
diff --git a/v5.7.x/.doctrees/pyclaw/index.doctree b/v5.7.x/.doctrees/pyclaw/index.doctree
index 3ad8fd5fe..075d3e1bb 100644
Binary files a/v5.7.x/.doctrees/pyclaw/index.doctree and b/v5.7.x/.doctrees/pyclaw/index.doctree differ
diff --git a/v5.7.x/.doctrees/pyclaw/io.doctree b/v5.7.x/.doctrees/pyclaw/io.doctree
index b55a1d1f6..d3816d1e8 100644
Binary files a/v5.7.x/.doctrees/pyclaw/io.doctree and b/v5.7.x/.doctrees/pyclaw/io.doctree differ
diff --git a/v5.7.x/.doctrees/pyclaw/output.doctree b/v5.7.x/.doctrees/pyclaw/output.doctree
index a26586ba6..e3bca0af4 100644
Binary files a/v5.7.x/.doctrees/pyclaw/output.doctree and b/v5.7.x/.doctrees/pyclaw/output.doctree differ
diff --git a/v5.7.x/.doctrees/pyclaw/parallel.doctree b/v5.7.x/.doctrees/pyclaw/parallel.doctree
index 8d704abca..9d263904d 100644
Binary files a/v5.7.x/.doctrees/pyclaw/parallel.doctree and b/v5.7.x/.doctrees/pyclaw/parallel.doctree differ
diff --git a/v5.7.x/.doctrees/pyclaw/plotting.doctree b/v5.7.x/.doctrees/pyclaw/plotting.doctree
index 70cea644d..0dacc7c73 100644
Binary files a/v5.7.x/.doctrees/pyclaw/plotting.doctree and b/v5.7.x/.doctrees/pyclaw/plotting.doctree differ
diff --git a/v5.7.x/.doctrees/pyclaw/problem.doctree b/v5.7.x/.doctrees/pyclaw/problem.doctree
index 40d457839..bf6e4bb8a 100644
Binary files a/v5.7.x/.doctrees/pyclaw/problem.doctree and b/v5.7.x/.doctrees/pyclaw/problem.doctree differ
diff --git a/v5.7.x/.doctrees/pyclaw/rp.doctree b/v5.7.x/.doctrees/pyclaw/rp.doctree
index 98f1e0209..2fe7dbda3 100644
Binary files a/v5.7.x/.doctrees/pyclaw/rp.doctree and b/v5.7.x/.doctrees/pyclaw/rp.doctree differ
diff --git a/v5.7.x/.doctrees/pyclaw/solution.doctree b/v5.7.x/.doctrees/pyclaw/solution.doctree
index 4f6099fe5..e8d16b1f1 100644
Binary files a/v5.7.x/.doctrees/pyclaw/solution.doctree and b/v5.7.x/.doctrees/pyclaw/solution.doctree differ
diff --git a/v5.7.x/.doctrees/pyclaw/solvers.doctree b/v5.7.x/.doctrees/pyclaw/solvers.doctree
index ea7d377d2..1f74acb45 100644
Binary files a/v5.7.x/.doctrees/pyclaw/solvers.doctree and b/v5.7.x/.doctrees/pyclaw/solvers.doctree differ
diff --git a/v5.7.x/.doctrees/pyclaw/started.doctree b/v5.7.x/.doctrees/pyclaw/started.doctree
index cf84af1b5..90d393e7a 100644
Binary files a/v5.7.x/.doctrees/pyclaw/started.doctree and b/v5.7.x/.doctrees/pyclaw/started.doctree differ
diff --git a/v5.7.x/.doctrees/pyclaw/state.doctree b/v5.7.x/.doctrees/pyclaw/state.doctree
index 6962abdd8..89e4de980 100644
Binary files a/v5.7.x/.doctrees/pyclaw/state.doctree and b/v5.7.x/.doctrees/pyclaw/state.doctree differ
diff --git a/v5.7.x/.doctrees/pyclaw/troubleshooting.doctree b/v5.7.x/.doctrees/pyclaw/troubleshooting.doctree
index f1070802a..dd3afb065 100644
Binary files a/v5.7.x/.doctrees/pyclaw/troubleshooting.doctree and b/v5.7.x/.doctrees/pyclaw/troubleshooting.doctree differ
diff --git a/v5.7.x/.doctrees/pyclaw/tutorial.doctree b/v5.7.x/.doctrees/pyclaw/tutorial.doctree
index 42ee3fa4c..1de22db62 100644
Binary files a/v5.7.x/.doctrees/pyclaw/tutorial.doctree and b/v5.7.x/.doctrees/pyclaw/tutorial.doctree differ
diff --git a/v5.7.x/.doctrees/pyclaw/util.doctree b/v5.7.x/.doctrees/pyclaw/util.doctree
index fe4b2bc7a..b15199c5c 100644
Binary files a/v5.7.x/.doctrees/pyclaw/util.doctree and b/v5.7.x/.doctrees/pyclaw/util.doctree differ
diff --git a/v5.7.x/.doctrees/python.doctree b/v5.7.x/.doctrees/python.doctree
index 49268d935..8eb29111b 100644
Binary files a/v5.7.x/.doctrees/python.doctree and b/v5.7.x/.doctrees/python.doctree differ
diff --git a/v5.7.x/.doctrees/python_path.doctree b/v5.7.x/.doctrees/python_path.doctree
index c6fdf509f..a4b5f7a19 100644
Binary files a/v5.7.x/.doctrees/python_path.doctree and b/v5.7.x/.doctrees/python_path.doctree differ
diff --git a/v5.7.x/.doctrees/qinit_defaults.doctree b/v5.7.x/.doctrees/qinit_defaults.doctree
index b011cb2d0..188f92d79 100644
Binary files a/v5.7.x/.doctrees/qinit_defaults.doctree and b/v5.7.x/.doctrees/qinit_defaults.doctree differ
diff --git a/v5.7.x/.doctrees/quick_surge.doctree b/v5.7.x/.doctrees/quick_surge.doctree
index ba227daec..86108ee42 100644
Binary files a/v5.7.x/.doctrees/quick_surge.doctree and b/v5.7.x/.doctrees/quick_surge.doctree differ
diff --git a/v5.7.x/.doctrees/quick_tsunami.doctree b/v5.7.x/.doctrees/quick_tsunami.doctree
index 7714bc644..4871d5a8a 100644
Binary files a/v5.7.x/.doctrees/quick_tsunami.doctree and b/v5.7.x/.doctrees/quick_tsunami.doctree differ
diff --git a/v5.7.x/.doctrees/refinement.doctree b/v5.7.x/.doctrees/refinement.doctree
index 2cef771a1..8cb3bd4f6 100644
Binary files a/v5.7.x/.doctrees/refinement.doctree and b/v5.7.x/.doctrees/refinement.doctree differ
diff --git a/v5.7.x/.doctrees/regression.doctree b/v5.7.x/.doctrees/regression.doctree
index f45d8c165..931d4b01e 100644
Binary files a/v5.7.x/.doctrees/regression.doctree and b/v5.7.x/.doctrees/regression.doctree differ
diff --git a/v5.7.x/.doctrees/release_5_0_0.doctree b/v5.7.x/.doctrees/release_5_0_0.doctree
index 337fa8d99..65c6c5e96 100644
Binary files a/v5.7.x/.doctrees/release_5_0_0.doctree and b/v5.7.x/.doctrees/release_5_0_0.doctree differ
diff --git a/v5.7.x/.doctrees/release_5_1_0.doctree b/v5.7.x/.doctrees/release_5_1_0.doctree
index d02a61f81..51f334f23 100644
Binary files a/v5.7.x/.doctrees/release_5_1_0.doctree and b/v5.7.x/.doctrees/release_5_1_0.doctree differ
diff --git a/v5.7.x/.doctrees/release_5_2_0.doctree b/v5.7.x/.doctrees/release_5_2_0.doctree
index 431664aa1..e53a96113 100644
Binary files a/v5.7.x/.doctrees/release_5_2_0.doctree and b/v5.7.x/.doctrees/release_5_2_0.doctree differ
diff --git a/v5.7.x/.doctrees/release_5_2_1.doctree b/v5.7.x/.doctrees/release_5_2_1.doctree
index bf99c6e87..fe167d103 100644
Binary files a/v5.7.x/.doctrees/release_5_2_1.doctree and b/v5.7.x/.doctrees/release_5_2_1.doctree differ
diff --git a/v5.7.x/.doctrees/release_5_2_2.doctree b/v5.7.x/.doctrees/release_5_2_2.doctree
index 9d1852768..43c80ad84 100644
Binary files a/v5.7.x/.doctrees/release_5_2_2.doctree and b/v5.7.x/.doctrees/release_5_2_2.doctree differ
diff --git a/v5.7.x/.doctrees/release_5_3_0.doctree b/v5.7.x/.doctrees/release_5_3_0.doctree
index 1c749b111..1b9c302d5 100644
Binary files a/v5.7.x/.doctrees/release_5_3_0.doctree and b/v5.7.x/.doctrees/release_5_3_0.doctree differ
diff --git a/v5.7.x/.doctrees/release_5_3_1.doctree b/v5.7.x/.doctrees/release_5_3_1.doctree
index 61f4af155..272e1cc8b 100644
Binary files a/v5.7.x/.doctrees/release_5_3_1.doctree and b/v5.7.x/.doctrees/release_5_3_1.doctree differ
diff --git a/v5.7.x/.doctrees/release_5_4_0.doctree b/v5.7.x/.doctrees/release_5_4_0.doctree
index f511c7f68..ef7507486 100644
Binary files a/v5.7.x/.doctrees/release_5_4_0.doctree and b/v5.7.x/.doctrees/release_5_4_0.doctree differ
diff --git a/v5.7.x/.doctrees/release_5_4_1.doctree b/v5.7.x/.doctrees/release_5_4_1.doctree
index 57cc9ca56..18f7267c6 100644
Binary files a/v5.7.x/.doctrees/release_5_4_1.doctree and b/v5.7.x/.doctrees/release_5_4_1.doctree differ
diff --git a/v5.7.x/.doctrees/release_5_5_0.doctree b/v5.7.x/.doctrees/release_5_5_0.doctree
index 0a6bfe9b4..b477cc86f 100644
Binary files a/v5.7.x/.doctrees/release_5_5_0.doctree and b/v5.7.x/.doctrees/release_5_5_0.doctree differ
diff --git a/v5.7.x/.doctrees/release_5_6_0.doctree b/v5.7.x/.doctrees/release_5_6_0.doctree
index 332519f92..a56989213 100644
Binary files a/v5.7.x/.doctrees/release_5_6_0.doctree and b/v5.7.x/.doctrees/release_5_6_0.doctree differ
diff --git a/v5.7.x/.doctrees/release_5_6_1.doctree b/v5.7.x/.doctrees/release_5_6_1.doctree
index 4e0ec0c0b..fec04fac7 100644
Binary files a/v5.7.x/.doctrees/release_5_6_1.doctree and b/v5.7.x/.doctrees/release_5_6_1.doctree differ
diff --git a/v5.7.x/.doctrees/release_5_7_0.doctree b/v5.7.x/.doctrees/release_5_7_0.doctree
index db41ea2df..c6d6ea09c 100644
Binary files a/v5.7.x/.doctrees/release_5_7_0.doctree and b/v5.7.x/.doctrees/release_5_7_0.doctree differ
diff --git a/v5.7.x/.doctrees/release_5_7_1.doctree b/v5.7.x/.doctrees/release_5_7_1.doctree
index 453939b39..12e31046f 100644
Binary files a/v5.7.x/.doctrees/release_5_7_1.doctree and b/v5.7.x/.doctrees/release_5_7_1.doctree differ
diff --git a/v5.7.x/.doctrees/releases.doctree b/v5.7.x/.doctrees/releases.doctree
index 313e2a459..a285915e8 100644
Binary files a/v5.7.x/.doctrees/releases.doctree and b/v5.7.x/.doctrees/releases.doctree differ
diff --git a/v5.7.x/.doctrees/restart.doctree b/v5.7.x/.doctrees/restart.doctree
index 86bc67463..e60bb7221 100644
Binary files a/v5.7.x/.doctrees/restart.doctree and b/v5.7.x/.doctrees/restart.doctree differ
diff --git a/v5.7.x/.doctrees/riemann.doctree b/v5.7.x/.doctrees/riemann.doctree
index 7ef570405..f9e022e47 100644
Binary files a/v5.7.x/.doctrees/riemann.doctree and b/v5.7.x/.doctrees/riemann.doctree differ
diff --git a/v5.7.x/.doctrees/riemann/Shallow_water_Riemann_solvers.doctree b/v5.7.x/.doctrees/riemann/Shallow_water_Riemann_solvers.doctree
index 87dbf0fc5..ec19bc4e1 100644
Binary files a/v5.7.x/.doctrees/riemann/Shallow_water_Riemann_solvers.doctree and b/v5.7.x/.doctrees/riemann/Shallow_water_Riemann_solvers.doctree differ
diff --git a/v5.7.x/.doctrees/ruled_rectangles.doctree b/v5.7.x/.doctrees/ruled_rectangles.doctree
index ab78d3f9b..5fa2717d0 100644
Binary files a/v5.7.x/.doctrees/ruled_rectangles.doctree and b/v5.7.x/.doctrees/ruled_rectangles.doctree differ
diff --git a/v5.7.x/.doctrees/sealevel.doctree b/v5.7.x/.doctrees/sealevel.doctree
index 4a830ddbe..16077634c 100644
Binary files a/v5.7.x/.doctrees/sealevel.doctree and b/v5.7.x/.doctrees/sealevel.doctree differ
diff --git a/v5.7.x/.doctrees/set_eta_init.doctree b/v5.7.x/.doctrees/set_eta_init.doctree
index 790f87953..6ee7e7491 100644
Binary files a/v5.7.x/.doctrees/set_eta_init.doctree and b/v5.7.x/.doctrees/set_eta_init.doctree differ
diff --git a/v5.7.x/.doctrees/setaux_defaults.doctree b/v5.7.x/.doctrees/setaux_defaults.doctree
index 25d5f631f..62be27fb4 100644
Binary files a/v5.7.x/.doctrees/setaux_defaults.doctree and b/v5.7.x/.doctrees/setaux_defaults.doctree differ
diff --git a/v5.7.x/.doctrees/setenv.doctree b/v5.7.x/.doctrees/setenv.doctree
index 26dad874e..500615275 100644
Binary files a/v5.7.x/.doctrees/setenv.doctree and b/v5.7.x/.doctrees/setenv.doctree differ
diff --git a/v5.7.x/.doctrees/setplot.doctree b/v5.7.x/.doctrees/setplot.doctree
index 07e4d7667..f4c260bec 100644
Binary files a/v5.7.x/.doctrees/setplot.doctree and b/v5.7.x/.doctrees/setplot.doctree differ
diff --git a/v5.7.x/.doctrees/setrun.doctree b/v5.7.x/.doctrees/setrun.doctree
index 820618dae..742f3b681 100644
Binary files a/v5.7.x/.doctrees/setrun.doctree and b/v5.7.x/.doctrees/setrun.doctree differ
diff --git a/v5.7.x/.doctrees/setrun_amrclaw.doctree b/v5.7.x/.doctrees/setrun_amrclaw.doctree
index 4042e1134..96df0fe4e 100644
Binary files a/v5.7.x/.doctrees/setrun_amrclaw.doctree and b/v5.7.x/.doctrees/setrun_amrclaw.doctree differ
diff --git a/v5.7.x/.doctrees/setrun_amrclaw_sample.doctree b/v5.7.x/.doctrees/setrun_amrclaw_sample.doctree
index dd5b59709..88ab0491f 100644
Binary files a/v5.7.x/.doctrees/setrun_amrclaw_sample.doctree and b/v5.7.x/.doctrees/setrun_amrclaw_sample.doctree differ
diff --git a/v5.7.x/.doctrees/setrun_geoclaw.doctree b/v5.7.x/.doctrees/setrun_geoclaw.doctree
index 9e1fd8d2e..5e4965e4b 100644
Binary files a/v5.7.x/.doctrees/setrun_geoclaw.doctree and b/v5.7.x/.doctrees/setrun_geoclaw.doctree differ
diff --git a/v5.7.x/.doctrees/setrun_sample.doctree b/v5.7.x/.doctrees/setrun_sample.doctree
index 8b0130dd9..f47f18048 100644
Binary files a/v5.7.x/.doctrees/setrun_sample.doctree and b/v5.7.x/.doctrees/setrun_sample.doctree differ
diff --git a/v5.7.x/.doctrees/sharing.doctree b/v5.7.x/.doctrees/sharing.doctree
index 8c2e7d98a..4bdae043a 100644
Binary files a/v5.7.x/.doctrees/sharing.doctree and b/v5.7.x/.doctrees/sharing.doctree differ
diff --git a/v5.7.x/.doctrees/sphinxdoc.doctree b/v5.7.x/.doctrees/sphinxdoc.doctree
index 16cebe3ac..47b007dfc 100644
Binary files a/v5.7.x/.doctrees/sphinxdoc.doctree and b/v5.7.x/.doctrees/sphinxdoc.doctree differ
diff --git a/v5.7.x/.doctrees/src1d_defaults.doctree b/v5.7.x/.doctrees/src1d_defaults.doctree
index d4e9fe42b..6745afee0 100644
Binary files a/v5.7.x/.doctrees/src1d_defaults.doctree and b/v5.7.x/.doctrees/src1d_defaults.doctree differ
diff --git a/v5.7.x/.doctrees/src_defaults.doctree b/v5.7.x/.doctrees/src_defaults.doctree
index a53de9352..c2958efe2 100644
Binary files a/v5.7.x/.doctrees/src_defaults.doctree and b/v5.7.x/.doctrees/src_defaults.doctree differ
diff --git a/v5.7.x/.doctrees/storm_module.doctree b/v5.7.x/.doctrees/storm_module.doctree
index 29d49ccb8..30f4c7fcd 100644
Binary files a/v5.7.x/.doctrees/storm_module.doctree and b/v5.7.x/.doctrees/storm_module.doctree differ
diff --git a/v5.7.x/.doctrees/surgedata.doctree b/v5.7.x/.doctrees/surgedata.doctree
index 0d1066b9f..3803c0bee 100644
Binary files a/v5.7.x/.doctrees/surgedata.doctree and b/v5.7.x/.doctrees/surgedata.doctree differ
diff --git a/v5.7.x/.doctrees/testing.doctree b/v5.7.x/.doctrees/testing.doctree
index 761256b64..e8f5384a0 100644
Binary files a/v5.7.x/.doctrees/testing.doctree and b/v5.7.x/.doctrees/testing.doctree differ
diff --git a/v5.7.x/.doctrees/timing.doctree b/v5.7.x/.doctrees/timing.doctree
index 2636d233b..e62210dcd 100644
Binary files a/v5.7.x/.doctrees/timing.doctree and b/v5.7.x/.doctrees/timing.doctree differ
diff --git a/v5.7.x/.doctrees/topo.doctree b/v5.7.x/.doctrees/topo.doctree
index 9f9b2a508..c908e3347 100644
Binary files a/v5.7.x/.doctrees/topo.doctree and b/v5.7.x/.doctrees/topo.doctree differ
diff --git a/v5.7.x/.doctrees/topotools.doctree b/v5.7.x/.doctrees/topotools.doctree
index f8e470519..4587e55db 100644
Binary files a/v5.7.x/.doctrees/topotools.doctree and b/v5.7.x/.doctrees/topotools.doctree differ
diff --git a/v5.7.x/.doctrees/topotools_module.doctree b/v5.7.x/.doctrees/topotools_module.doctree
index c0463c9dc..c6802a7ec 100644
Binary files a/v5.7.x/.doctrees/topotools_module.doctree and b/v5.7.x/.doctrees/topotools_module.doctree differ
diff --git a/v5.7.x/.doctrees/trouble.doctree b/v5.7.x/.doctrees/trouble.doctree
index fe17e0a1b..cdadc73c2 100644
Binary files a/v5.7.x/.doctrees/trouble.doctree and b/v5.7.x/.doctrees/trouble.doctree differ
diff --git a/v5.7.x/.doctrees/tsunamidata.doctree b/v5.7.x/.doctrees/tsunamidata.doctree
index 56a30afa2..cfdd2c05c 100644
Binary files a/v5.7.x/.doctrees/tsunamidata.doctree and b/v5.7.x/.doctrees/tsunamidata.doctree differ
diff --git a/v5.7.x/.doctrees/user_routines.doctree b/v5.7.x/.doctrees/user_routines.doctree
index da36c33c3..56ddb5890 100644
Binary files a/v5.7.x/.doctrees/user_routines.doctree and b/v5.7.x/.doctrees/user_routines.doctree differ
diff --git a/v5.7.x/.doctrees/visit_plotting.doctree b/v5.7.x/.doctrees/visit_plotting.doctree
index 5d1fabce8..e8370529d 100644
Binary files a/v5.7.x/.doctrees/visit_plotting.doctree and b/v5.7.x/.doctrees/visit_plotting.doctree differ
diff --git a/v5.7.x/.doctrees/vm.doctree b/v5.7.x/.doctrees/vm.doctree
index 6f59fc8de..fe0bf2409 100644
Binary files a/v5.7.x/.doctrees/vm.doctree and b/v5.7.x/.doctrees/vm.doctree differ
diff --git a/v5.7.x/.doctrees/wp_algorithms.doctree b/v5.7.x/.doctrees/wp_algorithms.doctree
index 4d95ac643..d6450bb2f 100644
Binary files a/v5.7.x/.doctrees/wp_algorithms.doctree and b/v5.7.x/.doctrees/wp_algorithms.doctree differ
diff --git a/v5.8.x/.buildinfo b/v5.8.x/.buildinfo
index 72c9fb54f..e513a84a0 100644
--- a/v5.8.x/.buildinfo
+++ b/v5.8.x/.buildinfo
@@ -1,4 +1,4 @@
 # Sphinx build info version 1
 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: 16b523d42d2664dca61788f891a28ef8
+config: 0a188328420d53eaacd226cc3f06de1c
 tags: 645f666f9bcd5a90fca523b33c5a78b7
diff --git a/v5.8.x/.doctrees/ClawPlotAxes.doctree b/v5.8.x/.doctrees/ClawPlotAxes.doctree
index f59673305..43b8a1679 100644
Binary files a/v5.8.x/.doctrees/ClawPlotAxes.doctree and b/v5.8.x/.doctrees/ClawPlotAxes.doctree differ
diff --git a/v5.8.x/.doctrees/ClawPlotData.doctree b/v5.8.x/.doctrees/ClawPlotData.doctree
index b4128c71c..2335f644d 100644
Binary files a/v5.8.x/.doctrees/ClawPlotData.doctree and b/v5.8.x/.doctrees/ClawPlotData.doctree differ
diff --git a/v5.8.x/.doctrees/ClawPlotFigure.doctree b/v5.8.x/.doctrees/ClawPlotFigure.doctree
index ed612862c..59c56559e 100644
Binary files a/v5.8.x/.doctrees/ClawPlotFigure.doctree and b/v5.8.x/.doctrees/ClawPlotFigure.doctree differ
diff --git a/v5.8.x/.doctrees/ClawPlotItem.doctree b/v5.8.x/.doctrees/ClawPlotItem.doctree
index 8971e2165..bdde09086 100644
Binary files a/v5.8.x/.doctrees/ClawPlotItem.doctree and b/v5.8.x/.doctrees/ClawPlotItem.doctree differ
diff --git a/v5.8.x/.doctrees/about.doctree b/v5.8.x/.doctrees/about.doctree
index 43889e01d..dd1c5719e 100644
Binary files a/v5.8.x/.doctrees/about.doctree and b/v5.8.x/.doctrees/about.doctree differ
diff --git a/v5.8.x/.doctrees/adjoint.doctree b/v5.8.x/.doctrees/adjoint.doctree
index 595f09fcc..d5940b54f 100644
Binary files a/v5.8.x/.doctrees/adjoint.doctree and b/v5.8.x/.doctrees/adjoint.doctree differ
diff --git a/v5.8.x/.doctrees/amr_algorithm.doctree b/v5.8.x/.doctrees/amr_algorithm.doctree
index 59ea594de..e058e0144 100644
Binary files a/v5.8.x/.doctrees/amr_algorithm.doctree and b/v5.8.x/.doctrees/amr_algorithm.doctree differ
diff --git a/v5.8.x/.doctrees/amrclaw.doctree b/v5.8.x/.doctrees/amrclaw.doctree
index 4c4ff6b8c..302ad27ef 100644
Binary files a/v5.8.x/.doctrees/amrclaw.doctree and b/v5.8.x/.doctrees/amrclaw.doctree differ
diff --git a/v5.8.x/.doctrees/amrclaw1d.doctree b/v5.8.x/.doctrees/amrclaw1d.doctree
index 7cba98175..94badff36 100644
Binary files a/v5.8.x/.doctrees/amrclaw1d.doctree and b/v5.8.x/.doctrees/amrclaw1d.doctree differ
diff --git a/v5.8.x/.doctrees/amrclaw_doxygen.doctree b/v5.8.x/.doctrees/amrclaw_doxygen.doctree
index 978b82029..6bbbcb336 100644
Binary files a/v5.8.x/.doctrees/amrclaw_doxygen.doctree and b/v5.8.x/.doctrees/amrclaw_doxygen.doctree differ
diff --git a/v5.8.x/.doctrees/amrclaw_flowcharts.doctree b/v5.8.x/.doctrees/amrclaw_flowcharts.doctree
index 7de945044..9c2d68607 100644
Binary files a/v5.8.x/.doctrees/amrclaw_flowcharts.doctree and b/v5.8.x/.doctrees/amrclaw_flowcharts.doctree differ
diff --git a/v5.8.x/.doctrees/application_documentation.doctree b/v5.8.x/.doctrees/application_documentation.doctree
index e1d70bef1..fe5ad2899 100644
Binary files a/v5.8.x/.doctrees/application_documentation.doctree and b/v5.8.x/.doctrees/application_documentation.doctree differ
diff --git a/v5.8.x/.doctrees/apps.doctree b/v5.8.x/.doctrees/apps.doctree
index 258ba95ca..314fea2d6 100644
Binary files a/v5.8.x/.doctrees/apps.doctree and b/v5.8.x/.doctrees/apps.doctree differ
diff --git a/v5.8.x/.doctrees/aws.doctree b/v5.8.x/.doctrees/aws.doctree
index 5c2be8c37..4f3082756 100644
Binary files a/v5.8.x/.doctrees/aws.doctree and b/v5.8.x/.doctrees/aws.doctree differ
diff --git a/v5.8.x/.doctrees/b4run.doctree b/v5.8.x/.doctrees/b4run.doctree
index 79b012625..6c5570865 100644
Binary files a/v5.8.x/.doctrees/b4run.doctree and b/v5.8.x/.doctrees/b4run.doctree differ
diff --git a/v5.8.x/.doctrees/b4step_defaults.doctree b/v5.8.x/.doctrees/b4step_defaults.doctree
index 20f398f87..ea2771763 100644
Binary files a/v5.8.x/.doctrees/b4step_defaults.doctree and b/v5.8.x/.doctrees/b4step_defaults.doctree differ
diff --git a/v5.8.x/.doctrees/bc.doctree b/v5.8.x/.doctrees/bc.doctree
index 6b3fed6ea..5a7cc552f 100644
Binary files a/v5.8.x/.doctrees/bc.doctree and b/v5.8.x/.doctrees/bc.doctree differ
diff --git a/v5.8.x/.doctrees/biblio.doctree b/v5.8.x/.doctrees/biblio.doctree
index 3551b64b8..260e82d33 100644
Binary files a/v5.8.x/.doctrees/biblio.doctree and b/v5.8.x/.doctrees/biblio.doctree differ
diff --git a/v5.8.x/.doctrees/changes_to_master.doctree b/v5.8.x/.doctrees/changes_to_master.doctree
index 57e68ae47..3b9881b06 100644
Binary files a/v5.8.x/.doctrees/changes_to_master.doctree and b/v5.8.x/.doctrees/changes_to_master.doctree differ
diff --git a/v5.8.x/.doctrees/claw43to46.doctree b/v5.8.x/.doctrees/claw43to46.doctree
index 3d156f73a..803daf0b7 100644
Binary files a/v5.8.x/.doctrees/claw43to46.doctree and b/v5.8.x/.doctrees/claw43to46.doctree differ
diff --git a/v5.8.x/.doctrees/claw46to50.doctree b/v5.8.x/.doctrees/claw46to50.doctree
index 29a140092..b7122ff6b 100644
Binary files a/v5.8.x/.doctrees/claw46to50.doctree and b/v5.8.x/.doctrees/claw46to50.doctree differ
diff --git a/v5.8.x/.doctrees/claw4x.doctree b/v5.8.x/.doctrees/claw4x.doctree
index 4617e8ea5..9d6772cc8 100644
Binary files a/v5.8.x/.doctrees/claw4x.doctree and b/v5.8.x/.doctrees/claw4x.doctree differ
diff --git a/v5.8.x/.doctrees/clawpack5.doctree b/v5.8.x/.doctrees/clawpack5.doctree
index b40d103f3..812f84a5c 100644
Binary files a/v5.8.x/.doctrees/clawpack5.doctree and b/v5.8.x/.doctrees/clawpack5.doctree differ
diff --git a/v5.8.x/.doctrees/clawpack_components.doctree b/v5.8.x/.doctrees/clawpack_components.doctree
index 739ae57b4..26a975f2b 100644
Binary files a/v5.8.x/.doctrees/clawpack_components.doctree and b/v5.8.x/.doctrees/clawpack_components.doctree differ
diff --git a/v5.8.x/.doctrees/community.doctree b/v5.8.x/.doctrees/community.doctree
index d7f92c3ba..1a75fb194 100644
Binary files a/v5.8.x/.doctrees/community.doctree and b/v5.8.x/.doctrees/community.doctree differ
diff --git a/v5.8.x/.doctrees/contents.doctree b/v5.8.x/.doctrees/contents.doctree
index 97e302b2e..8753f4d1f 100644
Binary files a/v5.8.x/.doctrees/contents.doctree and b/v5.8.x/.doctrees/contents.doctree differ
diff --git a/v5.8.x/.doctrees/contribute_apps.doctree b/v5.8.x/.doctrees/contribute_apps.doctree
index 4bc1f3b14..49b2e7e7b 100644
Binary files a/v5.8.x/.doctrees/contribute_apps.doctree and b/v5.8.x/.doctrees/contribute_apps.doctree differ
diff --git a/v5.8.x/.doctrees/current_data.doctree b/v5.8.x/.doctrees/current_data.doctree
index 0082cf111..f9675fd31 100644
Binary files a/v5.8.x/.doctrees/current_data.doctree and b/v5.8.x/.doctrees/current_data.doctree differ
diff --git a/v5.8.x/.doctrees/developers.doctree b/v5.8.x/.doctrees/developers.doctree
index 4bee990f5..5727418bd 100644
Binary files a/v5.8.x/.doctrees/developers.doctree and b/v5.8.x/.doctrees/developers.doctree differ
diff --git a/v5.8.x/.doctrees/docker_image.doctree b/v5.8.x/.doctrees/docker_image.doctree
index 25ad6669c..b40e71c00 100644
Binary files a/v5.8.x/.doctrees/docker_image.doctree and b/v5.8.x/.doctrees/docker_image.doctree differ
diff --git a/v5.8.x/.doctrees/dtopotools_module.doctree b/v5.8.x/.doctrees/dtopotools_module.doctree
index 622f6d718..5efe354ec 100644
Binary files a/v5.8.x/.doctrees/dtopotools_module.doctree and b/v5.8.x/.doctrees/dtopotools_module.doctree differ
diff --git a/v5.8.x/.doctrees/environment.pickle b/v5.8.x/.doctrees/environment.pickle
index f2d390e85..31d088644 100644
Binary files a/v5.8.x/.doctrees/environment.pickle and b/v5.8.x/.doctrees/environment.pickle differ
diff --git a/v5.8.x/.doctrees/f77_vs_f90.doctree b/v5.8.x/.doctrees/f77_vs_f90.doctree
index 129e4c015..af65cbee7 100644
Binary files a/v5.8.x/.doctrees/f77_vs_f90.doctree and b/v5.8.x/.doctrees/f77_vs_f90.doctree differ
diff --git a/v5.8.x/.doctrees/fgmax.doctree b/v5.8.x/.doctrees/fgmax.doctree
index 397d0e969..6b30b012b 100644
Binary files a/v5.8.x/.doctrees/fgmax.doctree and b/v5.8.x/.doctrees/fgmax.doctree differ
diff --git a/v5.8.x/.doctrees/fgmax_tools_module.doctree b/v5.8.x/.doctrees/fgmax_tools_module.doctree
index 6386a8106..69a169aab 100644
Binary files a/v5.8.x/.doctrees/fgmax_tools_module.doctree and b/v5.8.x/.doctrees/fgmax_tools_module.doctree differ
diff --git a/v5.8.x/.doctrees/fgout.doctree b/v5.8.x/.doctrees/fgout.doctree
index 1624bdfd9..99d61223c 100644
Binary files a/v5.8.x/.doctrees/fgout.doctree and b/v5.8.x/.doctrees/fgout.doctree differ
diff --git a/v5.8.x/.doctrees/first_run.doctree b/v5.8.x/.doctrees/first_run.doctree
index aa1b88343..eab243e4e 100644
Binary files a/v5.8.x/.doctrees/first_run.doctree and b/v5.8.x/.doctrees/first_run.doctree differ
diff --git a/v5.8.x/.doctrees/first_run_fortran.doctree b/v5.8.x/.doctrees/first_run_fortran.doctree
index 7e808148f..ddf46c318 100644
Binary files a/v5.8.x/.doctrees/first_run_fortran.doctree and b/v5.8.x/.doctrees/first_run_fortran.doctree differ
diff --git a/v5.8.x/.doctrees/first_run_pyclaw.doctree b/v5.8.x/.doctrees/first_run_pyclaw.doctree
index ae89111c0..1b97fac03 100644
Binary files a/v5.8.x/.doctrees/first_run_pyclaw.doctree and b/v5.8.x/.doctrees/first_run_pyclaw.doctree differ
diff --git a/v5.8.x/.doctrees/flagregions.doctree b/v5.8.x/.doctrees/flagregions.doctree
index 974f86a8b..65bd77d6e 100644
Binary files a/v5.8.x/.doctrees/flagregions.doctree and b/v5.8.x/.doctrees/flagregions.doctree differ
diff --git a/v5.8.x/.doctrees/force_dry.doctree b/v5.8.x/.doctrees/force_dry.doctree
index 2a2881cf3..d782726d3 100644
Binary files a/v5.8.x/.doctrees/force_dry.doctree and b/v5.8.x/.doctrees/force_dry.doctree differ
diff --git a/v5.8.x/.doctrees/fortran.doctree b/v5.8.x/.doctrees/fortran.doctree
index 6e5584c05..064c5bf70 100644
Binary files a/v5.8.x/.doctrees/fortran.doctree and b/v5.8.x/.doctrees/fortran.doctree differ
diff --git a/v5.8.x/.doctrees/fortran_compilers.doctree b/v5.8.x/.doctrees/fortran_compilers.doctree
index a813ae319..1f4dd5d11 100644
Binary files a/v5.8.x/.doctrees/fortran_compilers.doctree and b/v5.8.x/.doctrees/fortran_compilers.doctree differ
diff --git a/v5.8.x/.doctrees/fvmbook.doctree b/v5.8.x/.doctrees/fvmbook.doctree
index 2d0348c47..624246324 100644
Binary files a/v5.8.x/.doctrees/fvmbook.doctree and b/v5.8.x/.doctrees/fvmbook.doctree differ
diff --git a/v5.8.x/.doctrees/galleries.doctree b/v5.8.x/.doctrees/galleries.doctree
index 115ccccca..33134e1da 100644
Binary files a/v5.8.x/.doctrees/galleries.doctree and b/v5.8.x/.doctrees/galleries.doctree differ
diff --git a/v5.8.x/.doctrees/gauges.doctree b/v5.8.x/.doctrees/gauges.doctree
index b508662cf..2e78f2e75 100644
Binary files a/v5.8.x/.doctrees/gauges.doctree and b/v5.8.x/.doctrees/gauges.doctree differ
diff --git a/v5.8.x/.doctrees/geoclaw.doctree b/v5.8.x/.doctrees/geoclaw.doctree
index 729e57b51..7b5b523fb 100644
Binary files a/v5.8.x/.doctrees/geoclaw.doctree and b/v5.8.x/.doctrees/geoclaw.doctree differ
diff --git a/v5.8.x/.doctrees/geoclaw_started.doctree b/v5.8.x/.doctrees/geoclaw_started.doctree
index 5db63ba79..949f7a424 100644
Binary files a/v5.8.x/.doctrees/geoclaw_started.doctree and b/v5.8.x/.doctrees/geoclaw_started.doctree differ
diff --git a/v5.8.x/.doctrees/geoclaw_util_module.doctree b/v5.8.x/.doctrees/geoclaw_util_module.doctree
index 91f964a98..d2f416a97 100644
Binary files a/v5.8.x/.doctrees/geoclaw_util_module.doctree and b/v5.8.x/.doctrees/geoclaw_util_module.doctree differ
diff --git a/v5.8.x/.doctrees/geohints.doctree b/v5.8.x/.doctrees/geohints.doctree
index 12b5bd6ca..fa3143fd6 100644
Binary files a/v5.8.x/.doctrees/geohints.doctree and b/v5.8.x/.doctrees/geohints.doctree differ
diff --git a/v5.8.x/.doctrees/geoplot.doctree b/v5.8.x/.doctrees/geoplot.doctree
index dadfabfc4..04f594bee 100644
Binary files a/v5.8.x/.doctrees/geoplot.doctree and b/v5.8.x/.doctrees/geoplot.doctree differ
diff --git a/v5.8.x/.doctrees/git_versions.doctree b/v5.8.x/.doctrees/git_versions.doctree
index eeea78efa..0a9049c2b 100644
Binary files a/v5.8.x/.doctrees/git_versions.doctree and b/v5.8.x/.doctrees/git_versions.doctree differ
diff --git a/v5.8.x/.doctrees/googleearth_plotting.doctree b/v5.8.x/.doctrees/googleearth_plotting.doctree
index deba2fd00..bb760b753 100644
Binary files a/v5.8.x/.doctrees/googleearth_plotting.doctree and b/v5.8.x/.doctrees/googleearth_plotting.doctree differ
diff --git a/v5.8.x/.doctrees/gpu.doctree b/v5.8.x/.doctrees/gpu.doctree
index 85999c252..f3b433a7a 100644
Binary files a/v5.8.x/.doctrees/gpu.doctree and b/v5.8.x/.doctrees/gpu.doctree differ
diff --git a/v5.8.x/.doctrees/grid_registration.doctree b/v5.8.x/.doctrees/grid_registration.doctree
index 50dea6f44..c473766b3 100644
Binary files a/v5.8.x/.doctrees/grid_registration.doctree and b/v5.8.x/.doctrees/grid_registration.doctree differ
diff --git a/v5.8.x/.doctrees/howto_doc.doctree b/v5.8.x/.doctrees/howto_doc.doctree
index 92df80383..59335cd5c 100644
Binary files a/v5.8.x/.doctrees/howto_doc.doctree and b/v5.8.x/.doctrees/howto_doc.doctree differ
diff --git a/v5.8.x/.doctrees/howto_release.doctree b/v5.8.x/.doctrees/howto_release.doctree
index b87345843..5ebf92f3a 100644
Binary files a/v5.8.x/.doctrees/howto_release.doctree and b/v5.8.x/.doctrees/howto_release.doctree differ
diff --git a/v5.8.x/.doctrees/installing.doctree b/v5.8.x/.doctrees/installing.doctree
index eabccf539..8170e2df3 100644
Binary files a/v5.8.x/.doctrees/installing.doctree and b/v5.8.x/.doctrees/installing.doctree differ
diff --git a/v5.8.x/.doctrees/installing_fortcodes.doctree b/v5.8.x/.doctrees/installing_fortcodes.doctree
index 467d70cc8..2ba3ef9f7 100644
Binary files a/v5.8.x/.doctrees/installing_fortcodes.doctree and b/v5.8.x/.doctrees/installing_fortcodes.doctree differ
diff --git a/v5.8.x/.doctrees/installing_pip.doctree b/v5.8.x/.doctrees/installing_pip.doctree
index 26e681f39..7d7ff6220 100644
Binary files a/v5.8.x/.doctrees/installing_pip.doctree and b/v5.8.x/.doctrees/installing_pip.doctree differ
diff --git a/v5.8.x/.doctrees/kmltools_module.doctree b/v5.8.x/.doctrees/kmltools_module.doctree
index eb2a4114b..0e8c463a0 100644
Binary files a/v5.8.x/.doctrees/kmltools_module.doctree and b/v5.8.x/.doctrees/kmltools_module.doctree differ
diff --git a/v5.8.x/.doctrees/lagrangian_gauges.doctree b/v5.8.x/.doctrees/lagrangian_gauges.doctree
index 4cbc18d80..06ab275b7 100644
Binary files a/v5.8.x/.doctrees/lagrangian_gauges.doctree and b/v5.8.x/.doctrees/lagrangian_gauges.doctree differ
diff --git a/v5.8.x/.doctrees/license.doctree b/v5.8.x/.doctrees/license.doctree
index a83ba08dd..b32ce26da 100644
Binary files a/v5.8.x/.doctrees/license.doctree and b/v5.8.x/.doctrees/license.doctree differ
diff --git a/v5.8.x/.doctrees/makefiles.doctree b/v5.8.x/.doctrees/makefiles.doctree
index 5b6d549ab..35ecd6513 100644
Binary files a/v5.8.x/.doctrees/makefiles.doctree and b/v5.8.x/.doctrees/makefiles.doctree differ
diff --git a/v5.8.x/.doctrees/makefiles_library.doctree b/v5.8.x/.doctrees/makefiles_library.doctree
index 4b76bcb5b..3e0258879 100644
Binary files a/v5.8.x/.doctrees/makefiles_library.doctree and b/v5.8.x/.doctrees/makefiles_library.doctree differ
diff --git a/v5.8.x/.doctrees/manning.doctree b/v5.8.x/.doctrees/manning.doctree
index fa9693920..75c388b16 100644
Binary files a/v5.8.x/.doctrees/manning.doctree and b/v5.8.x/.doctrees/manning.doctree differ
diff --git a/v5.8.x/.doctrees/mapc2p.doctree b/v5.8.x/.doctrees/mapc2p.doctree
index 8e788589c..df838cdd6 100644
Binary files a/v5.8.x/.doctrees/mapc2p.doctree and b/v5.8.x/.doctrees/mapc2p.doctree differ
diff --git a/v5.8.x/.doctrees/marching_front.doctree b/v5.8.x/.doctrees/marching_front.doctree
index 2545221b6..d499672ba 100644
Binary files a/v5.8.x/.doctrees/marching_front.doctree and b/v5.8.x/.doctrees/marching_front.doctree differ
diff --git a/v5.8.x/.doctrees/matlab_plotting.doctree b/v5.8.x/.doctrees/matlab_plotting.doctree
index 664d08882..bb13cee11 100644
Binary files a/v5.8.x/.doctrees/matlab_plotting.doctree and b/v5.8.x/.doctrees/matlab_plotting.doctree differ
diff --git a/v5.8.x/.doctrees/netcdf.doctree b/v5.8.x/.doctrees/netcdf.doctree
index 031920fd8..fc764d4b4 100644
Binary files a/v5.8.x/.doctrees/netcdf.doctree and b/v5.8.x/.doctrees/netcdf.doctree differ
diff --git a/v5.8.x/.doctrees/newapp.doctree b/v5.8.x/.doctrees/newapp.doctree
index 1f408bc99..cce0124a3 100644
Binary files a/v5.8.x/.doctrees/newapp.doctree and b/v5.8.x/.doctrees/newapp.doctree differ
diff --git a/v5.8.x/.doctrees/okada.doctree b/v5.8.x/.doctrees/okada.doctree
index 2b7bd4b78..61fdd0270 100644
Binary files a/v5.8.x/.doctrees/okada.doctree and b/v5.8.x/.doctrees/okada.doctree differ
diff --git a/v5.8.x/.doctrees/openmp.doctree b/v5.8.x/.doctrees/openmp.doctree
index 1a7eadbe8..394bafaee 100644
Binary files a/v5.8.x/.doctrees/openmp.doctree and b/v5.8.x/.doctrees/openmp.doctree differ
diff --git a/v5.8.x/.doctrees/output_styles.doctree b/v5.8.x/.doctrees/output_styles.doctree
index ed74a71d7..6c248932b 100644
Binary files a/v5.8.x/.doctrees/output_styles.doctree and b/v5.8.x/.doctrees/output_styles.doctree differ
diff --git a/v5.8.x/.doctrees/packages.doctree b/v5.8.x/.doctrees/packages.doctree
index 11597a2f8..e0830cfe0 100644
Binary files a/v5.8.x/.doctrees/packages.doctree and b/v5.8.x/.doctrees/packages.doctree differ
diff --git a/v5.8.x/.doctrees/photos.doctree b/v5.8.x/.doctrees/photos.doctree
index d9542521d..d779f168b 100644
Binary files a/v5.8.x/.doctrees/photos.doctree and b/v5.8.x/.doctrees/photos.doctree differ
diff --git a/v5.8.x/.doctrees/plotexamples.doctree b/v5.8.x/.doctrees/plotexamples.doctree
index c9ee606ce..84ee9f23f 100644
Binary files a/v5.8.x/.doctrees/plotexamples.doctree and b/v5.8.x/.doctrees/plotexamples.doctree differ
diff --git a/v5.8.x/.doctrees/plotting.doctree b/v5.8.x/.doctrees/plotting.doctree
index 8fc6cdcc8..d63a25483 100644
Binary files a/v5.8.x/.doctrees/plotting.doctree and b/v5.8.x/.doctrees/plotting.doctree differ
diff --git a/v5.8.x/.doctrees/plotting_faq.doctree b/v5.8.x/.doctrees/plotting_faq.doctree
index ec5ce4ba6..0f0e9b08a 100644
Binary files a/v5.8.x/.doctrees/plotting_faq.doctree and b/v5.8.x/.doctrees/plotting_faq.doctree differ
diff --git a/v5.8.x/.doctrees/plotting_geoclaw.doctree b/v5.8.x/.doctrees/plotting_geoclaw.doctree
index b386bdc18..ce0144856 100644
Binary files a/v5.8.x/.doctrees/plotting_geoclaw.doctree and b/v5.8.x/.doctrees/plotting_geoclaw.doctree differ
diff --git a/v5.8.x/.doctrees/plotting_python.doctree b/v5.8.x/.doctrees/plotting_python.doctree
index a21e95938..f86e5b122 100644
Binary files a/v5.8.x/.doctrees/plotting_python.doctree and b/v5.8.x/.doctrees/plotting_python.doctree differ
diff --git a/v5.8.x/.doctrees/prereqs.doctree b/v5.8.x/.doctrees/prereqs.doctree
index 6b2818d08..cf9a28408 100644
Binary files a/v5.8.x/.doctrees/prereqs.doctree and b/v5.8.x/.doctrees/prereqs.doctree differ
diff --git a/v5.8.x/.doctrees/pyclaw/about.doctree b/v5.8.x/.doctrees/pyclaw/about.doctree
index 10372700d..56adfffcd 100644
Binary files a/v5.8.x/.doctrees/pyclaw/about.doctree and b/v5.8.x/.doctrees/pyclaw/about.doctree differ
diff --git a/v5.8.x/.doctrees/pyclaw/basics.doctree b/v5.8.x/.doctrees/pyclaw/basics.doctree
index 261c40420..9b72fc9e7 100644
Binary files a/v5.8.x/.doctrees/pyclaw/basics.doctree and b/v5.8.x/.doctrees/pyclaw/basics.doctree differ
diff --git a/v5.8.x/.doctrees/pyclaw/classes.doctree b/v5.8.x/.doctrees/pyclaw/classes.doctree
index f5ce0ea67..761dec900 100644
Binary files a/v5.8.x/.doctrees/pyclaw/classes.doctree and b/v5.8.x/.doctrees/pyclaw/classes.doctree differ
diff --git a/v5.8.x/.doctrees/pyclaw/clawpack_and_pyclaw.doctree b/v5.8.x/.doctrees/pyclaw/clawpack_and_pyclaw.doctree
index 38a7c2ddd..199acc91c 100644
Binary files a/v5.8.x/.doctrees/pyclaw/clawpack_and_pyclaw.doctree and b/v5.8.x/.doctrees/pyclaw/clawpack_and_pyclaw.doctree differ
diff --git a/v5.8.x/.doctrees/pyclaw/cloud.doctree b/v5.8.x/.doctrees/pyclaw/cloud.doctree
index e08ded1df..221bf2d60 100644
Binary files a/v5.8.x/.doctrees/pyclaw/cloud.doctree and b/v5.8.x/.doctrees/pyclaw/cloud.doctree differ
diff --git a/v5.8.x/.doctrees/pyclaw/controller.doctree b/v5.8.x/.doctrees/pyclaw/controller.doctree
index 811b5c2b6..0527c5123 100644
Binary files a/v5.8.x/.doctrees/pyclaw/controller.doctree and b/v5.8.x/.doctrees/pyclaw/controller.doctree differ
diff --git a/v5.8.x/.doctrees/pyclaw/evolve/limiters.doctree b/v5.8.x/.doctrees/pyclaw/evolve/limiters.doctree
index 4a8e7955d..a8294d2ba 100644
Binary files a/v5.8.x/.doctrees/pyclaw/evolve/limiters.doctree and b/v5.8.x/.doctrees/pyclaw/evolve/limiters.doctree differ
diff --git a/v5.8.x/.doctrees/pyclaw/examples.doctree b/v5.8.x/.doctrees/pyclaw/examples.doctree
index 72314cca6..7c37355b7 100644
Binary files a/v5.8.x/.doctrees/pyclaw/examples.doctree and b/v5.8.x/.doctrees/pyclaw/examples.doctree differ
diff --git a/v5.8.x/.doctrees/pyclaw/geometry.doctree b/v5.8.x/.doctrees/pyclaw/geometry.doctree
index f8547c580..2a70164b0 100644
Binary files a/v5.8.x/.doctrees/pyclaw/geometry.doctree and b/v5.8.x/.doctrees/pyclaw/geometry.doctree differ
diff --git a/v5.8.x/.doctrees/pyclaw/going_further.doctree b/v5.8.x/.doctrees/pyclaw/going_further.doctree
index efdc5df45..b338497f4 100644
Binary files a/v5.8.x/.doctrees/pyclaw/going_further.doctree and b/v5.8.x/.doctrees/pyclaw/going_further.doctree differ
diff --git a/v5.8.x/.doctrees/pyclaw/index.doctree b/v5.8.x/.doctrees/pyclaw/index.doctree
index fb7edb586..6818fa055 100644
Binary files a/v5.8.x/.doctrees/pyclaw/index.doctree and b/v5.8.x/.doctrees/pyclaw/index.doctree differ
diff --git a/v5.8.x/.doctrees/pyclaw/io.doctree b/v5.8.x/.doctrees/pyclaw/io.doctree
index d3b4dbf66..5469f981a 100644
Binary files a/v5.8.x/.doctrees/pyclaw/io.doctree and b/v5.8.x/.doctrees/pyclaw/io.doctree differ
diff --git a/v5.8.x/.doctrees/pyclaw/output.doctree b/v5.8.x/.doctrees/pyclaw/output.doctree
index c6fff7e33..64182ba5a 100644
Binary files a/v5.8.x/.doctrees/pyclaw/output.doctree and b/v5.8.x/.doctrees/pyclaw/output.doctree differ
diff --git a/v5.8.x/.doctrees/pyclaw/parallel.doctree b/v5.8.x/.doctrees/pyclaw/parallel.doctree
index 4fd552571..16a20c6c4 100644
Binary files a/v5.8.x/.doctrees/pyclaw/parallel.doctree and b/v5.8.x/.doctrees/pyclaw/parallel.doctree differ
diff --git a/v5.8.x/.doctrees/pyclaw/plotting.doctree b/v5.8.x/.doctrees/pyclaw/plotting.doctree
index 4676a47d8..f4dfca250 100644
Binary files a/v5.8.x/.doctrees/pyclaw/plotting.doctree and b/v5.8.x/.doctrees/pyclaw/plotting.doctree differ
diff --git a/v5.8.x/.doctrees/pyclaw/problem.doctree b/v5.8.x/.doctrees/pyclaw/problem.doctree
index 94a64bf0b..c255c4500 100644
Binary files a/v5.8.x/.doctrees/pyclaw/problem.doctree and b/v5.8.x/.doctrees/pyclaw/problem.doctree differ
diff --git a/v5.8.x/.doctrees/pyclaw/rp.doctree b/v5.8.x/.doctrees/pyclaw/rp.doctree
index 2dd71d925..ede789159 100644
Binary files a/v5.8.x/.doctrees/pyclaw/rp.doctree and b/v5.8.x/.doctrees/pyclaw/rp.doctree differ
diff --git a/v5.8.x/.doctrees/pyclaw/solution.doctree b/v5.8.x/.doctrees/pyclaw/solution.doctree
index f5dc26d43..15d999c8e 100644
Binary files a/v5.8.x/.doctrees/pyclaw/solution.doctree and b/v5.8.x/.doctrees/pyclaw/solution.doctree differ
diff --git a/v5.8.x/.doctrees/pyclaw/solvers.doctree b/v5.8.x/.doctrees/pyclaw/solvers.doctree
index 8f6df9658..57413a70b 100644
Binary files a/v5.8.x/.doctrees/pyclaw/solvers.doctree and b/v5.8.x/.doctrees/pyclaw/solvers.doctree differ
diff --git a/v5.8.x/.doctrees/pyclaw/started.doctree b/v5.8.x/.doctrees/pyclaw/started.doctree
index bbd8f9619..07b999533 100644
Binary files a/v5.8.x/.doctrees/pyclaw/started.doctree and b/v5.8.x/.doctrees/pyclaw/started.doctree differ
diff --git a/v5.8.x/.doctrees/pyclaw/state.doctree b/v5.8.x/.doctrees/pyclaw/state.doctree
index eeedc6f86..401a0783f 100644
Binary files a/v5.8.x/.doctrees/pyclaw/state.doctree and b/v5.8.x/.doctrees/pyclaw/state.doctree differ
diff --git a/v5.8.x/.doctrees/pyclaw/troubleshooting.doctree b/v5.8.x/.doctrees/pyclaw/troubleshooting.doctree
index 27211f963..3b0954908 100644
Binary files a/v5.8.x/.doctrees/pyclaw/troubleshooting.doctree and b/v5.8.x/.doctrees/pyclaw/troubleshooting.doctree differ
diff --git a/v5.8.x/.doctrees/pyclaw/tutorial.doctree b/v5.8.x/.doctrees/pyclaw/tutorial.doctree
index 39067d475..da1ea004c 100644
Binary files a/v5.8.x/.doctrees/pyclaw/tutorial.doctree and b/v5.8.x/.doctrees/pyclaw/tutorial.doctree differ
diff --git a/v5.8.x/.doctrees/pyclaw/util.doctree b/v5.8.x/.doctrees/pyclaw/util.doctree
index 67f62e028..82bdd70fa 100644
Binary files a/v5.8.x/.doctrees/pyclaw/util.doctree and b/v5.8.x/.doctrees/pyclaw/util.doctree differ
diff --git a/v5.8.x/.doctrees/python.doctree b/v5.8.x/.doctrees/python.doctree
index 341d7a661..50564ecfc 100644
Binary files a/v5.8.x/.doctrees/python.doctree and b/v5.8.x/.doctrees/python.doctree differ
diff --git a/v5.8.x/.doctrees/python_path.doctree b/v5.8.x/.doctrees/python_path.doctree
index a7350fb15..f5d422a18 100644
Binary files a/v5.8.x/.doctrees/python_path.doctree and b/v5.8.x/.doctrees/python_path.doctree differ
diff --git a/v5.8.x/.doctrees/qinit_defaults.doctree b/v5.8.x/.doctrees/qinit_defaults.doctree
index ff9305a48..38846d536 100644
Binary files a/v5.8.x/.doctrees/qinit_defaults.doctree and b/v5.8.x/.doctrees/qinit_defaults.doctree differ
diff --git a/v5.8.x/.doctrees/quick_surge.doctree b/v5.8.x/.doctrees/quick_surge.doctree
index e0f87a68d..2337ac2ae 100644
Binary files a/v5.8.x/.doctrees/quick_surge.doctree and b/v5.8.x/.doctrees/quick_surge.doctree differ
diff --git a/v5.8.x/.doctrees/quick_tsunami.doctree b/v5.8.x/.doctrees/quick_tsunami.doctree
index b3e92845e..781a7123d 100644
Binary files a/v5.8.x/.doctrees/quick_tsunami.doctree and b/v5.8.x/.doctrees/quick_tsunami.doctree differ
diff --git a/v5.8.x/.doctrees/refinement.doctree b/v5.8.x/.doctrees/refinement.doctree
index 00a8ed867..e8c3f3c40 100644
Binary files a/v5.8.x/.doctrees/refinement.doctree and b/v5.8.x/.doctrees/refinement.doctree differ
diff --git a/v5.8.x/.doctrees/regression.doctree b/v5.8.x/.doctrees/regression.doctree
index f733f8354..25c6a193c 100644
Binary files a/v5.8.x/.doctrees/regression.doctree and b/v5.8.x/.doctrees/regression.doctree differ
diff --git a/v5.8.x/.doctrees/release_5_0_0.doctree b/v5.8.x/.doctrees/release_5_0_0.doctree
index d03e80596..c13c066ee 100644
Binary files a/v5.8.x/.doctrees/release_5_0_0.doctree and b/v5.8.x/.doctrees/release_5_0_0.doctree differ
diff --git a/v5.8.x/.doctrees/release_5_1_0.doctree b/v5.8.x/.doctrees/release_5_1_0.doctree
index 5fb4f2a17..0b3e324ad 100644
Binary files a/v5.8.x/.doctrees/release_5_1_0.doctree and b/v5.8.x/.doctrees/release_5_1_0.doctree differ
diff --git a/v5.8.x/.doctrees/release_5_2_0.doctree b/v5.8.x/.doctrees/release_5_2_0.doctree
index f599460cb..d8a8e6d99 100644
Binary files a/v5.8.x/.doctrees/release_5_2_0.doctree and b/v5.8.x/.doctrees/release_5_2_0.doctree differ
diff --git a/v5.8.x/.doctrees/release_5_2_1.doctree b/v5.8.x/.doctrees/release_5_2_1.doctree
index 48ab6ad98..a01ea2e7a 100644
Binary files a/v5.8.x/.doctrees/release_5_2_1.doctree and b/v5.8.x/.doctrees/release_5_2_1.doctree differ
diff --git a/v5.8.x/.doctrees/release_5_2_2.doctree b/v5.8.x/.doctrees/release_5_2_2.doctree
index dc23374e4..c77b5c717 100644
Binary files a/v5.8.x/.doctrees/release_5_2_2.doctree and b/v5.8.x/.doctrees/release_5_2_2.doctree differ
diff --git a/v5.8.x/.doctrees/release_5_3_0.doctree b/v5.8.x/.doctrees/release_5_3_0.doctree
index b5096e0c5..6680ef449 100644
Binary files a/v5.8.x/.doctrees/release_5_3_0.doctree and b/v5.8.x/.doctrees/release_5_3_0.doctree differ
diff --git a/v5.8.x/.doctrees/release_5_3_1.doctree b/v5.8.x/.doctrees/release_5_3_1.doctree
index 42b84ebe5..1c6ccf501 100644
Binary files a/v5.8.x/.doctrees/release_5_3_1.doctree and b/v5.8.x/.doctrees/release_5_3_1.doctree differ
diff --git a/v5.8.x/.doctrees/release_5_4_0.doctree b/v5.8.x/.doctrees/release_5_4_0.doctree
index 132c3bcad..683103fa2 100644
Binary files a/v5.8.x/.doctrees/release_5_4_0.doctree and b/v5.8.x/.doctrees/release_5_4_0.doctree differ
diff --git a/v5.8.x/.doctrees/release_5_4_1.doctree b/v5.8.x/.doctrees/release_5_4_1.doctree
index 859fbd6a3..7f47301a4 100644
Binary files a/v5.8.x/.doctrees/release_5_4_1.doctree and b/v5.8.x/.doctrees/release_5_4_1.doctree differ
diff --git a/v5.8.x/.doctrees/release_5_5_0.doctree b/v5.8.x/.doctrees/release_5_5_0.doctree
index ea23e92b1..3b0e7c59a 100644
Binary files a/v5.8.x/.doctrees/release_5_5_0.doctree and b/v5.8.x/.doctrees/release_5_5_0.doctree differ
diff --git a/v5.8.x/.doctrees/release_5_6_0.doctree b/v5.8.x/.doctrees/release_5_6_0.doctree
index 99081667f..667052f13 100644
Binary files a/v5.8.x/.doctrees/release_5_6_0.doctree and b/v5.8.x/.doctrees/release_5_6_0.doctree differ
diff --git a/v5.8.x/.doctrees/release_5_6_1.doctree b/v5.8.x/.doctrees/release_5_6_1.doctree
index d9da4ed4b..a810c444a 100644
Binary files a/v5.8.x/.doctrees/release_5_6_1.doctree and b/v5.8.x/.doctrees/release_5_6_1.doctree differ
diff --git a/v5.8.x/.doctrees/release_5_7_0.doctree b/v5.8.x/.doctrees/release_5_7_0.doctree
index 54dedd225..909c5d1e9 100644
Binary files a/v5.8.x/.doctrees/release_5_7_0.doctree and b/v5.8.x/.doctrees/release_5_7_0.doctree differ
diff --git a/v5.8.x/.doctrees/release_5_7_1.doctree b/v5.8.x/.doctrees/release_5_7_1.doctree
index f9941f55f..e0c698c17 100644
Binary files a/v5.8.x/.doctrees/release_5_7_1.doctree and b/v5.8.x/.doctrees/release_5_7_1.doctree differ
diff --git a/v5.8.x/.doctrees/release_5_8_0.doctree b/v5.8.x/.doctrees/release_5_8_0.doctree
index e0478ff13..71288b5d4 100644
Binary files a/v5.8.x/.doctrees/release_5_8_0.doctree and b/v5.8.x/.doctrees/release_5_8_0.doctree differ
diff --git a/v5.8.x/.doctrees/release_5_8_1.doctree b/v5.8.x/.doctrees/release_5_8_1.doctree
index 87d7ff4e6..fcff5f06c 100644
Binary files a/v5.8.x/.doctrees/release_5_8_1.doctree and b/v5.8.x/.doctrees/release_5_8_1.doctree differ
diff --git a/v5.8.x/.doctrees/release_5_8_2.doctree b/v5.8.x/.doctrees/release_5_8_2.doctree
index 5edf23a02..4b5d1a2f4 100644
Binary files a/v5.8.x/.doctrees/release_5_8_2.doctree and b/v5.8.x/.doctrees/release_5_8_2.doctree differ
diff --git a/v5.8.x/.doctrees/releases.doctree b/v5.8.x/.doctrees/releases.doctree
index 89a30ebfe..ea6370a7b 100644
Binary files a/v5.8.x/.doctrees/releases.doctree and b/v5.8.x/.doctrees/releases.doctree differ
diff --git a/v5.8.x/.doctrees/restart.doctree b/v5.8.x/.doctrees/restart.doctree
index a08c35c0d..fd6856e0f 100644
Binary files a/v5.8.x/.doctrees/restart.doctree and b/v5.8.x/.doctrees/restart.doctree differ
diff --git a/v5.8.x/.doctrees/riemann.doctree b/v5.8.x/.doctrees/riemann.doctree
index 3bb646c6a..7c961327f 100644
Binary files a/v5.8.x/.doctrees/riemann.doctree and b/v5.8.x/.doctrees/riemann.doctree differ
diff --git a/v5.8.x/.doctrees/riemann/Shallow_water_Riemann_solvers.doctree b/v5.8.x/.doctrees/riemann/Shallow_water_Riemann_solvers.doctree
index 192fa8441..215b8fe9a 100644
Binary files a/v5.8.x/.doctrees/riemann/Shallow_water_Riemann_solvers.doctree and b/v5.8.x/.doctrees/riemann/Shallow_water_Riemann_solvers.doctree differ
diff --git a/v5.8.x/.doctrees/ruled_rectangles.doctree b/v5.8.x/.doctrees/ruled_rectangles.doctree
index e68984df1..b521e0690 100644
Binary files a/v5.8.x/.doctrees/ruled_rectangles.doctree and b/v5.8.x/.doctrees/ruled_rectangles.doctree differ
diff --git a/v5.8.x/.doctrees/sealevel.doctree b/v5.8.x/.doctrees/sealevel.doctree
index e5ce390ef..edab0c456 100644
Binary files a/v5.8.x/.doctrees/sealevel.doctree and b/v5.8.x/.doctrees/sealevel.doctree differ
diff --git a/v5.8.x/.doctrees/set_eta_init.doctree b/v5.8.x/.doctrees/set_eta_init.doctree
index bb3ac02e7..17d5f0574 100644
Binary files a/v5.8.x/.doctrees/set_eta_init.doctree and b/v5.8.x/.doctrees/set_eta_init.doctree differ
diff --git a/v5.8.x/.doctrees/setaux_defaults.doctree b/v5.8.x/.doctrees/setaux_defaults.doctree
index c18fc0a5a..b0ad4a97a 100644
Binary files a/v5.8.x/.doctrees/setaux_defaults.doctree and b/v5.8.x/.doctrees/setaux_defaults.doctree differ
diff --git a/v5.8.x/.doctrees/setenv.doctree b/v5.8.x/.doctrees/setenv.doctree
index dbab062cf..54d917b86 100644
Binary files a/v5.8.x/.doctrees/setenv.doctree and b/v5.8.x/.doctrees/setenv.doctree differ
diff --git a/v5.8.x/.doctrees/setplot.doctree b/v5.8.x/.doctrees/setplot.doctree
index c0a4827ff..3ea2a8bc5 100644
Binary files a/v5.8.x/.doctrees/setplot.doctree and b/v5.8.x/.doctrees/setplot.doctree differ
diff --git a/v5.8.x/.doctrees/setrun.doctree b/v5.8.x/.doctrees/setrun.doctree
index 39730eee1..16b687e30 100644
Binary files a/v5.8.x/.doctrees/setrun.doctree and b/v5.8.x/.doctrees/setrun.doctree differ
diff --git a/v5.8.x/.doctrees/setrun_amrclaw.doctree b/v5.8.x/.doctrees/setrun_amrclaw.doctree
index 4f20d6c2e..487322456 100644
Binary files a/v5.8.x/.doctrees/setrun_amrclaw.doctree and b/v5.8.x/.doctrees/setrun_amrclaw.doctree differ
diff --git a/v5.8.x/.doctrees/setrun_amrclaw_sample.doctree b/v5.8.x/.doctrees/setrun_amrclaw_sample.doctree
index 4072372d4..72e64683b 100644
Binary files a/v5.8.x/.doctrees/setrun_amrclaw_sample.doctree and b/v5.8.x/.doctrees/setrun_amrclaw_sample.doctree differ
diff --git a/v5.8.x/.doctrees/setrun_geoclaw.doctree b/v5.8.x/.doctrees/setrun_geoclaw.doctree
index 9decf160a..dd1458289 100644
Binary files a/v5.8.x/.doctrees/setrun_geoclaw.doctree and b/v5.8.x/.doctrees/setrun_geoclaw.doctree differ
diff --git a/v5.8.x/.doctrees/setrun_sample.doctree b/v5.8.x/.doctrees/setrun_sample.doctree
index 93cbe9eb8..e79f7bf04 100644
Binary files a/v5.8.x/.doctrees/setrun_sample.doctree and b/v5.8.x/.doctrees/setrun_sample.doctree differ
diff --git a/v5.8.x/.doctrees/sharing.doctree b/v5.8.x/.doctrees/sharing.doctree
index 0b743337c..428d64cf4 100644
Binary files a/v5.8.x/.doctrees/sharing.doctree and b/v5.8.x/.doctrees/sharing.doctree differ
diff --git a/v5.8.x/.doctrees/sphinxdoc.doctree b/v5.8.x/.doctrees/sphinxdoc.doctree
index 0685015b5..fb53e48c0 100644
Binary files a/v5.8.x/.doctrees/sphinxdoc.doctree and b/v5.8.x/.doctrees/sphinxdoc.doctree differ
diff --git a/v5.8.x/.doctrees/src1d_defaults.doctree b/v5.8.x/.doctrees/src1d_defaults.doctree
index d913cb97f..7b75ff913 100644
Binary files a/v5.8.x/.doctrees/src1d_defaults.doctree and b/v5.8.x/.doctrees/src1d_defaults.doctree differ
diff --git a/v5.8.x/.doctrees/src_defaults.doctree b/v5.8.x/.doctrees/src_defaults.doctree
index 7e7a924e3..6de2c08c6 100644
Binary files a/v5.8.x/.doctrees/src_defaults.doctree and b/v5.8.x/.doctrees/src_defaults.doctree differ
diff --git a/v5.8.x/.doctrees/storm_module.doctree b/v5.8.x/.doctrees/storm_module.doctree
index ab84213e2..8a1ce7051 100644
Binary files a/v5.8.x/.doctrees/storm_module.doctree and b/v5.8.x/.doctrees/storm_module.doctree differ
diff --git a/v5.8.x/.doctrees/surgedata.doctree b/v5.8.x/.doctrees/surgedata.doctree
index 2615ad510..8dea7360c 100644
Binary files a/v5.8.x/.doctrees/surgedata.doctree and b/v5.8.x/.doctrees/surgedata.doctree differ
diff --git a/v5.8.x/.doctrees/testing.doctree b/v5.8.x/.doctrees/testing.doctree
index 3b01947d8..e644f6178 100644
Binary files a/v5.8.x/.doctrees/testing.doctree and b/v5.8.x/.doctrees/testing.doctree differ
diff --git a/v5.8.x/.doctrees/timing.doctree b/v5.8.x/.doctrees/timing.doctree
index 6e17b71ca..4ee2b6a57 100644
Binary files a/v5.8.x/.doctrees/timing.doctree and b/v5.8.x/.doctrees/timing.doctree differ
diff --git a/v5.8.x/.doctrees/topo.doctree b/v5.8.x/.doctrees/topo.doctree
index fea7d9476..90b152c0c 100644
Binary files a/v5.8.x/.doctrees/topo.doctree and b/v5.8.x/.doctrees/topo.doctree differ
diff --git a/v5.8.x/.doctrees/topotools.doctree b/v5.8.x/.doctrees/topotools.doctree
index 0d0747d03..4b51a99b5 100644
Binary files a/v5.8.x/.doctrees/topotools.doctree and b/v5.8.x/.doctrees/topotools.doctree differ
diff --git a/v5.8.x/.doctrees/topotools_module.doctree b/v5.8.x/.doctrees/topotools_module.doctree
index 507dc7a13..db99d1b76 100644
Binary files a/v5.8.x/.doctrees/topotools_module.doctree and b/v5.8.x/.doctrees/topotools_module.doctree differ
diff --git a/v5.8.x/.doctrees/trouble.doctree b/v5.8.x/.doctrees/trouble.doctree
index eda15092d..c5bf80d5e 100644
Binary files a/v5.8.x/.doctrees/trouble.doctree and b/v5.8.x/.doctrees/trouble.doctree differ
diff --git a/v5.8.x/.doctrees/tsunamidata.doctree b/v5.8.x/.doctrees/tsunamidata.doctree
index 76a5bfd11..e397111d7 100644
Binary files a/v5.8.x/.doctrees/tsunamidata.doctree and b/v5.8.x/.doctrees/tsunamidata.doctree differ
diff --git a/v5.8.x/.doctrees/user_routines.doctree b/v5.8.x/.doctrees/user_routines.doctree
index 886932105..f4253d364 100644
Binary files a/v5.8.x/.doctrees/user_routines.doctree and b/v5.8.x/.doctrees/user_routines.doctree differ
diff --git a/v5.8.x/.doctrees/visit_plotting.doctree b/v5.8.x/.doctrees/visit_plotting.doctree
index d980e70c2..fbb4e3c61 100644
Binary files a/v5.8.x/.doctrees/visit_plotting.doctree and b/v5.8.x/.doctrees/visit_plotting.doctree differ
diff --git a/v5.8.x/.doctrees/vm.doctree b/v5.8.x/.doctrees/vm.doctree
index 56ef8e4b6..c128b96ec 100644
Binary files a/v5.8.x/.doctrees/vm.doctree and b/v5.8.x/.doctrees/vm.doctree differ
diff --git a/v5.8.x/.doctrees/wp_algorithms.doctree b/v5.8.x/.doctrees/wp_algorithms.doctree
index 58aa21826..cbfe55883 100644
Binary files a/v5.8.x/.doctrees/wp_algorithms.doctree and b/v5.8.x/.doctrees/wp_algorithms.doctree differ
diff --git a/v5.9.x/.buildinfo b/v5.9.x/.buildinfo
index 1c4395b3e..991bdfd0d 100644
--- a/v5.9.x/.buildinfo
+++ b/v5.9.x/.buildinfo
@@ -1,4 +1,4 @@
 # Sphinx build info version 1
 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: 28090ddc41001fadae5407947d798e83
+config: 7555d8e569f5f26a23fe88daa247be93
 tags: 645f666f9bcd5a90fca523b33c5a78b7
diff --git a/v5.9.x/.doctrees/ClawPlotAxes.doctree b/v5.9.x/.doctrees/ClawPlotAxes.doctree
index f8ed3afea..734dcb02c 100644
Binary files a/v5.9.x/.doctrees/ClawPlotAxes.doctree and b/v5.9.x/.doctrees/ClawPlotAxes.doctree differ
diff --git a/v5.9.x/.doctrees/ClawPlotData.doctree b/v5.9.x/.doctrees/ClawPlotData.doctree
index 918ea5a2b..d5b0f62c6 100644
Binary files a/v5.9.x/.doctrees/ClawPlotData.doctree and b/v5.9.x/.doctrees/ClawPlotData.doctree differ
diff --git a/v5.9.x/.doctrees/ClawPlotFigure.doctree b/v5.9.x/.doctrees/ClawPlotFigure.doctree
index 4cdb90f1d..8d8f5c657 100644
Binary files a/v5.9.x/.doctrees/ClawPlotFigure.doctree and b/v5.9.x/.doctrees/ClawPlotFigure.doctree differ
diff --git a/v5.9.x/.doctrees/ClawPlotItem.doctree b/v5.9.x/.doctrees/ClawPlotItem.doctree
index 15b963fbe..05cf53749 100644
Binary files a/v5.9.x/.doctrees/ClawPlotItem.doctree and b/v5.9.x/.doctrees/ClawPlotItem.doctree differ
diff --git a/v5.9.x/.doctrees/about.doctree b/v5.9.x/.doctrees/about.doctree
index 94b33429e..0336371cc 100644
Binary files a/v5.9.x/.doctrees/about.doctree and b/v5.9.x/.doctrees/about.doctree differ
diff --git a/v5.9.x/.doctrees/adjoint.doctree b/v5.9.x/.doctrees/adjoint.doctree
index b5780fe2d..365762c66 100644
Binary files a/v5.9.x/.doctrees/adjoint.doctree and b/v5.9.x/.doctrees/adjoint.doctree differ
diff --git a/v5.9.x/.doctrees/amr_algorithm.doctree b/v5.9.x/.doctrees/amr_algorithm.doctree
index 1bd31135f..33ec7a6fb 100644
Binary files a/v5.9.x/.doctrees/amr_algorithm.doctree and b/v5.9.x/.doctrees/amr_algorithm.doctree differ
diff --git a/v5.9.x/.doctrees/amrclaw.doctree b/v5.9.x/.doctrees/amrclaw.doctree
index 43afa5ba7..6286e4734 100644
Binary files a/v5.9.x/.doctrees/amrclaw.doctree and b/v5.9.x/.doctrees/amrclaw.doctree differ
diff --git a/v5.9.x/.doctrees/amrclaw1d.doctree b/v5.9.x/.doctrees/amrclaw1d.doctree
index 8db11085e..902c01de1 100644
Binary files a/v5.9.x/.doctrees/amrclaw1d.doctree and b/v5.9.x/.doctrees/amrclaw1d.doctree differ
diff --git a/v5.9.x/.doctrees/amrclaw_doxygen.doctree b/v5.9.x/.doctrees/amrclaw_doxygen.doctree
index 97dfadeff..87e349720 100644
Binary files a/v5.9.x/.doctrees/amrclaw_doxygen.doctree and b/v5.9.x/.doctrees/amrclaw_doxygen.doctree differ
diff --git a/v5.9.x/.doctrees/amrclaw_flowcharts.doctree b/v5.9.x/.doctrees/amrclaw_flowcharts.doctree
index 06e3057c9..f924a3dbc 100644
Binary files a/v5.9.x/.doctrees/amrclaw_flowcharts.doctree and b/v5.9.x/.doctrees/amrclaw_flowcharts.doctree differ
diff --git a/v5.9.x/.doctrees/application_documentation.doctree b/v5.9.x/.doctrees/application_documentation.doctree
index 359dd1b8e..5db6b6e5e 100644
Binary files a/v5.9.x/.doctrees/application_documentation.doctree and b/v5.9.x/.doctrees/application_documentation.doctree differ
diff --git a/v5.9.x/.doctrees/apps.doctree b/v5.9.x/.doctrees/apps.doctree
index 05350bbc4..b55cb2c24 100644
Binary files a/v5.9.x/.doctrees/apps.doctree and b/v5.9.x/.doctrees/apps.doctree differ
diff --git a/v5.9.x/.doctrees/aws.doctree b/v5.9.x/.doctrees/aws.doctree
index a00bccd7a..b04f2bfe7 100644
Binary files a/v5.9.x/.doctrees/aws.doctree and b/v5.9.x/.doctrees/aws.doctree differ
diff --git a/v5.9.x/.doctrees/b4run.doctree b/v5.9.x/.doctrees/b4run.doctree
index 16f4b72a9..d56d64e10 100644
Binary files a/v5.9.x/.doctrees/b4run.doctree and b/v5.9.x/.doctrees/b4run.doctree differ
diff --git a/v5.9.x/.doctrees/b4step_defaults.doctree b/v5.9.x/.doctrees/b4step_defaults.doctree
index 02796b071..23f8ff0c6 100644
Binary files a/v5.9.x/.doctrees/b4step_defaults.doctree and b/v5.9.x/.doctrees/b4step_defaults.doctree differ
diff --git a/v5.9.x/.doctrees/bc.doctree b/v5.9.x/.doctrees/bc.doctree
index b9586ff61..cda98c0df 100644
Binary files a/v5.9.x/.doctrees/bc.doctree and b/v5.9.x/.doctrees/bc.doctree differ
diff --git a/v5.9.x/.doctrees/biblio.doctree b/v5.9.x/.doctrees/biblio.doctree
index 4aa19a34a..2a26fc8d1 100644
Binary files a/v5.9.x/.doctrees/biblio.doctree and b/v5.9.x/.doctrees/biblio.doctree differ
diff --git a/v5.9.x/.doctrees/bouss1d.doctree b/v5.9.x/.doctrees/bouss1d.doctree
index 4ab9bdb93..cdfd06aea 100644
Binary files a/v5.9.x/.doctrees/bouss1d.doctree and b/v5.9.x/.doctrees/bouss1d.doctree differ
diff --git a/v5.9.x/.doctrees/bouss2d.doctree b/v5.9.x/.doctrees/bouss2d.doctree
index 17be9c293..06e0751c6 100644
Binary files a/v5.9.x/.doctrees/bouss2d.doctree and b/v5.9.x/.doctrees/bouss2d.doctree differ
diff --git a/v5.9.x/.doctrees/changes_to_master.doctree b/v5.9.x/.doctrees/changes_to_master.doctree
index 07a6a9752..3403a0750 100644
Binary files a/v5.9.x/.doctrees/changes_to_master.doctree and b/v5.9.x/.doctrees/changes_to_master.doctree differ
diff --git a/v5.9.x/.doctrees/claw43to46.doctree b/v5.9.x/.doctrees/claw43to46.doctree
index 80a07a320..4a4f61e40 100644
Binary files a/v5.9.x/.doctrees/claw43to46.doctree and b/v5.9.x/.doctrees/claw43to46.doctree differ
diff --git a/v5.9.x/.doctrees/claw46to50.doctree b/v5.9.x/.doctrees/claw46to50.doctree
index c56f5ff1c..db4319d79 100644
Binary files a/v5.9.x/.doctrees/claw46to50.doctree and b/v5.9.x/.doctrees/claw46to50.doctree differ
diff --git a/v5.9.x/.doctrees/claw4x.doctree b/v5.9.x/.doctrees/claw4x.doctree
index 6c66f92e7..e6159c5cd 100644
Binary files a/v5.9.x/.doctrees/claw4x.doctree and b/v5.9.x/.doctrees/claw4x.doctree differ
diff --git a/v5.9.x/.doctrees/clawpack5.doctree b/v5.9.x/.doctrees/clawpack5.doctree
index e0cc17c13..7d2413e81 100644
Binary files a/v5.9.x/.doctrees/clawpack5.doctree and b/v5.9.x/.doctrees/clawpack5.doctree differ
diff --git a/v5.9.x/.doctrees/clawpack_components.doctree b/v5.9.x/.doctrees/clawpack_components.doctree
index 0631de930..372b477b5 100644
Binary files a/v5.9.x/.doctrees/clawpack_components.doctree and b/v5.9.x/.doctrees/clawpack_components.doctree differ
diff --git a/v5.9.x/.doctrees/community.doctree b/v5.9.x/.doctrees/community.doctree
index 5a6aabc00..bf822cbb9 100644
Binary files a/v5.9.x/.doctrees/community.doctree and b/v5.9.x/.doctrees/community.doctree differ
diff --git a/v5.9.x/.doctrees/contents.doctree b/v5.9.x/.doctrees/contents.doctree
index 00947712d..5bedb8675 100644
Binary files a/v5.9.x/.doctrees/contents.doctree and b/v5.9.x/.doctrees/contents.doctree differ
diff --git a/v5.9.x/.doctrees/contribute_apps.doctree b/v5.9.x/.doctrees/contribute_apps.doctree
index 916b91e47..789ea2d19 100644
Binary files a/v5.9.x/.doctrees/contribute_apps.doctree and b/v5.9.x/.doctrees/contribute_apps.doctree differ
diff --git a/v5.9.x/.doctrees/current_data.doctree b/v5.9.x/.doctrees/current_data.doctree
index 018208a45..f0e61dc3f 100644
Binary files a/v5.9.x/.doctrees/current_data.doctree and b/v5.9.x/.doctrees/current_data.doctree differ
diff --git a/v5.9.x/.doctrees/developers.doctree b/v5.9.x/.doctrees/developers.doctree
index 29279554d..a9b558a15 100644
Binary files a/v5.9.x/.doctrees/developers.doctree and b/v5.9.x/.doctrees/developers.doctree differ
diff --git a/v5.9.x/.doctrees/docker_image.doctree b/v5.9.x/.doctrees/docker_image.doctree
index 81a3351e0..1d5a24e8f 100644
Binary files a/v5.9.x/.doctrees/docker_image.doctree and b/v5.9.x/.doctrees/docker_image.doctree differ
diff --git a/v5.9.x/.doctrees/dtopotools_module.doctree b/v5.9.x/.doctrees/dtopotools_module.doctree
index fb8bddb8d..c17edac55 100644
Binary files a/v5.9.x/.doctrees/dtopotools_module.doctree and b/v5.9.x/.doctrees/dtopotools_module.doctree differ
diff --git a/v5.9.x/.doctrees/environment.pickle b/v5.9.x/.doctrees/environment.pickle
index 9c87ca1f4..c268775f7 100644
Binary files a/v5.9.x/.doctrees/environment.pickle and b/v5.9.x/.doctrees/environment.pickle differ
diff --git a/v5.9.x/.doctrees/f77_vs_f90.doctree b/v5.9.x/.doctrees/f77_vs_f90.doctree
index 75fdd9191..f48d69cd1 100644
Binary files a/v5.9.x/.doctrees/f77_vs_f90.doctree and b/v5.9.x/.doctrees/f77_vs_f90.doctree differ
diff --git a/v5.9.x/.doctrees/fgmax.doctree b/v5.9.x/.doctrees/fgmax.doctree
index fb4ae8d22..f9a44c3ca 100644
Binary files a/v5.9.x/.doctrees/fgmax.doctree and b/v5.9.x/.doctrees/fgmax.doctree differ
diff --git a/v5.9.x/.doctrees/fgmax_tools_module.doctree b/v5.9.x/.doctrees/fgmax_tools_module.doctree
index d09e450ee..770253173 100644
Binary files a/v5.9.x/.doctrees/fgmax_tools_module.doctree and b/v5.9.x/.doctrees/fgmax_tools_module.doctree differ
diff --git a/v5.9.x/.doctrees/fgout.doctree b/v5.9.x/.doctrees/fgout.doctree
index e511abdd3..dab15dd57 100644
Binary files a/v5.9.x/.doctrees/fgout.doctree and b/v5.9.x/.doctrees/fgout.doctree differ
diff --git a/v5.9.x/.doctrees/fgout_tools_module.doctree b/v5.9.x/.doctrees/fgout_tools_module.doctree
index 1fd8b7646..1a024dc32 100644
Binary files a/v5.9.x/.doctrees/fgout_tools_module.doctree and b/v5.9.x/.doctrees/fgout_tools_module.doctree differ
diff --git a/v5.9.x/.doctrees/first_run.doctree b/v5.9.x/.doctrees/first_run.doctree
index 1937a87a5..4743fddc7 100644
Binary files a/v5.9.x/.doctrees/first_run.doctree and b/v5.9.x/.doctrees/first_run.doctree differ
diff --git a/v5.9.x/.doctrees/first_run_fortran.doctree b/v5.9.x/.doctrees/first_run_fortran.doctree
index e2f258d86..8283c978e 100644
Binary files a/v5.9.x/.doctrees/first_run_fortran.doctree and b/v5.9.x/.doctrees/first_run_fortran.doctree differ
diff --git a/v5.9.x/.doctrees/first_run_pyclaw.doctree b/v5.9.x/.doctrees/first_run_pyclaw.doctree
index 3980f2908..9e4a9c87f 100644
Binary files a/v5.9.x/.doctrees/first_run_pyclaw.doctree and b/v5.9.x/.doctrees/first_run_pyclaw.doctree differ
diff --git a/v5.9.x/.doctrees/flagregions.doctree b/v5.9.x/.doctrees/flagregions.doctree
index 0ee931843..93141facd 100644
Binary files a/v5.9.x/.doctrees/flagregions.doctree and b/v5.9.x/.doctrees/flagregions.doctree differ
diff --git a/v5.9.x/.doctrees/force_dry.doctree b/v5.9.x/.doctrees/force_dry.doctree
index 5098d02f1..8f7c3aa0c 100644
Binary files a/v5.9.x/.doctrees/force_dry.doctree and b/v5.9.x/.doctrees/force_dry.doctree differ
diff --git a/v5.9.x/.doctrees/fortran.doctree b/v5.9.x/.doctrees/fortran.doctree
index f6ac22173..427df7905 100644
Binary files a/v5.9.x/.doctrees/fortran.doctree and b/v5.9.x/.doctrees/fortran.doctree differ
diff --git a/v5.9.x/.doctrees/fortran_compilers.doctree b/v5.9.x/.doctrees/fortran_compilers.doctree
index e377e9bfc..d2c78f334 100644
Binary files a/v5.9.x/.doctrees/fortran_compilers.doctree and b/v5.9.x/.doctrees/fortran_compilers.doctree differ
diff --git a/v5.9.x/.doctrees/fvmbook.doctree b/v5.9.x/.doctrees/fvmbook.doctree
index 2b9ff7f3a..622de0703 100644
Binary files a/v5.9.x/.doctrees/fvmbook.doctree and b/v5.9.x/.doctrees/fvmbook.doctree differ
diff --git a/v5.9.x/.doctrees/galleries.doctree b/v5.9.x/.doctrees/galleries.doctree
index bb1f8bb04..20b856e8d 100644
Binary files a/v5.9.x/.doctrees/galleries.doctree and b/v5.9.x/.doctrees/galleries.doctree differ
diff --git a/v5.9.x/.doctrees/gauges.doctree b/v5.9.x/.doctrees/gauges.doctree
index 9086fa863..b82a70004 100644
Binary files a/v5.9.x/.doctrees/gauges.doctree and b/v5.9.x/.doctrees/gauges.doctree differ
diff --git a/v5.9.x/.doctrees/geoclaw.doctree b/v5.9.x/.doctrees/geoclaw.doctree
index 755b707d3..628d663ea 100644
Binary files a/v5.9.x/.doctrees/geoclaw.doctree and b/v5.9.x/.doctrees/geoclaw.doctree differ
diff --git a/v5.9.x/.doctrees/geoclaw1d.doctree b/v5.9.x/.doctrees/geoclaw1d.doctree
index 8401c17b5..4730cc3c8 100644
Binary files a/v5.9.x/.doctrees/geoclaw1d.doctree and b/v5.9.x/.doctrees/geoclaw1d.doctree differ
diff --git a/v5.9.x/.doctrees/geoclaw_started.doctree b/v5.9.x/.doctrees/geoclaw_started.doctree
index 812d1503a..804dcb933 100644
Binary files a/v5.9.x/.doctrees/geoclaw_started.doctree and b/v5.9.x/.doctrees/geoclaw_started.doctree differ
diff --git a/v5.9.x/.doctrees/geoclaw_util_module.doctree b/v5.9.x/.doctrees/geoclaw_util_module.doctree
index 522db8b77..442f949cd 100644
Binary files a/v5.9.x/.doctrees/geoclaw_util_module.doctree and b/v5.9.x/.doctrees/geoclaw_util_module.doctree differ
diff --git a/v5.9.x/.doctrees/geohints.doctree b/v5.9.x/.doctrees/geohints.doctree
index afa2cffa7..591ef44f5 100644
Binary files a/v5.9.x/.doctrees/geohints.doctree and b/v5.9.x/.doctrees/geohints.doctree differ
diff --git a/v5.9.x/.doctrees/geoplot.doctree b/v5.9.x/.doctrees/geoplot.doctree
index 60028f868..0cf9c177e 100644
Binary files a/v5.9.x/.doctrees/geoplot.doctree and b/v5.9.x/.doctrees/geoplot.doctree differ
diff --git a/v5.9.x/.doctrees/git_versions.doctree b/v5.9.x/.doctrees/git_versions.doctree
index 4ce9c7641..39aa36b09 100644
Binary files a/v5.9.x/.doctrees/git_versions.doctree and b/v5.9.x/.doctrees/git_versions.doctree differ
diff --git a/v5.9.x/.doctrees/googleearth_plotting.doctree b/v5.9.x/.doctrees/googleearth_plotting.doctree
index 4b34e88ec..75f025226 100644
Binary files a/v5.9.x/.doctrees/googleearth_plotting.doctree and b/v5.9.x/.doctrees/googleearth_plotting.doctree differ
diff --git a/v5.9.x/.doctrees/gpu.doctree b/v5.9.x/.doctrees/gpu.doctree
index 7e769591e..2d922b992 100644
Binary files a/v5.9.x/.doctrees/gpu.doctree and b/v5.9.x/.doctrees/gpu.doctree differ
diff --git a/v5.9.x/.doctrees/grid_registration.doctree b/v5.9.x/.doctrees/grid_registration.doctree
index 6e7a5150a..2bc1ab2c9 100644
Binary files a/v5.9.x/.doctrees/grid_registration.doctree and b/v5.9.x/.doctrees/grid_registration.doctree differ
diff --git a/v5.9.x/.doctrees/howto_doc.doctree b/v5.9.x/.doctrees/howto_doc.doctree
index f93e74721..f32264c39 100644
Binary files a/v5.9.x/.doctrees/howto_doc.doctree and b/v5.9.x/.doctrees/howto_doc.doctree differ
diff --git a/v5.9.x/.doctrees/howto_release.doctree b/v5.9.x/.doctrees/howto_release.doctree
index 51ef41e64..ed6ebd2e1 100644
Binary files a/v5.9.x/.doctrees/howto_release.doctree and b/v5.9.x/.doctrees/howto_release.doctree differ
diff --git a/v5.9.x/.doctrees/installing.doctree b/v5.9.x/.doctrees/installing.doctree
index 32c2e6927..f5848cb7f 100644
Binary files a/v5.9.x/.doctrees/installing.doctree and b/v5.9.x/.doctrees/installing.doctree differ
diff --git a/v5.9.x/.doctrees/installing_fortcodes.doctree b/v5.9.x/.doctrees/installing_fortcodes.doctree
index de04c5c88..b8f2ff6da 100644
Binary files a/v5.9.x/.doctrees/installing_fortcodes.doctree and b/v5.9.x/.doctrees/installing_fortcodes.doctree differ
diff --git a/v5.9.x/.doctrees/installing_pip.doctree b/v5.9.x/.doctrees/installing_pip.doctree
index 895beddbd..bcaa260cc 100644
Binary files a/v5.9.x/.doctrees/installing_pip.doctree and b/v5.9.x/.doctrees/installing_pip.doctree differ
diff --git a/v5.9.x/.doctrees/kmltools_module.doctree b/v5.9.x/.doctrees/kmltools_module.doctree
index 151626865..89acdf4fc 100644
Binary files a/v5.9.x/.doctrees/kmltools_module.doctree and b/v5.9.x/.doctrees/kmltools_module.doctree differ
diff --git a/v5.9.x/.doctrees/lagrangian_gauges.doctree b/v5.9.x/.doctrees/lagrangian_gauges.doctree
index 7689ca902..43095c2e7 100644
Binary files a/v5.9.x/.doctrees/lagrangian_gauges.doctree and b/v5.9.x/.doctrees/lagrangian_gauges.doctree differ
diff --git a/v5.9.x/.doctrees/license.doctree b/v5.9.x/.doctrees/license.doctree
index d283872f3..982890a4b 100644
Binary files a/v5.9.x/.doctrees/license.doctree and b/v5.9.x/.doctrees/license.doctree differ
diff --git a/v5.9.x/.doctrees/makefiles.doctree b/v5.9.x/.doctrees/makefiles.doctree
index 2eb69900a..800a275b4 100644
Binary files a/v5.9.x/.doctrees/makefiles.doctree and b/v5.9.x/.doctrees/makefiles.doctree differ
diff --git a/v5.9.x/.doctrees/makefiles_library.doctree b/v5.9.x/.doctrees/makefiles_library.doctree
index f0dc53c4c..fd99daf63 100644
Binary files a/v5.9.x/.doctrees/makefiles_library.doctree and b/v5.9.x/.doctrees/makefiles_library.doctree differ
diff --git a/v5.9.x/.doctrees/manning.doctree b/v5.9.x/.doctrees/manning.doctree
index fe0b87781..16cebde2a 100644
Binary files a/v5.9.x/.doctrees/manning.doctree and b/v5.9.x/.doctrees/manning.doctree differ
diff --git a/v5.9.x/.doctrees/mapc2p.doctree b/v5.9.x/.doctrees/mapc2p.doctree
index a129272df..6f5558f3c 100644
Binary files a/v5.9.x/.doctrees/mapc2p.doctree and b/v5.9.x/.doctrees/mapc2p.doctree differ
diff --git a/v5.9.x/.doctrees/marching_front.doctree b/v5.9.x/.doctrees/marching_front.doctree
index b1ad9ba50..ca0e03c3c 100644
Binary files a/v5.9.x/.doctrees/marching_front.doctree and b/v5.9.x/.doctrees/marching_front.doctree differ
diff --git a/v5.9.x/.doctrees/matlab_plotting.doctree b/v5.9.x/.doctrees/matlab_plotting.doctree
index 78c867d6e..4317b3ac5 100644
Binary files a/v5.9.x/.doctrees/matlab_plotting.doctree and b/v5.9.x/.doctrees/matlab_plotting.doctree differ
diff --git a/v5.9.x/.doctrees/nearshore_interp.doctree b/v5.9.x/.doctrees/nearshore_interp.doctree
index 272b65f5a..cd2929e9e 100644
Binary files a/v5.9.x/.doctrees/nearshore_interp.doctree and b/v5.9.x/.doctrees/nearshore_interp.doctree differ
diff --git a/v5.9.x/.doctrees/netcdf.doctree b/v5.9.x/.doctrees/netcdf.doctree
index a09d307d6..c46311038 100644
Binary files a/v5.9.x/.doctrees/netcdf.doctree and b/v5.9.x/.doctrees/netcdf.doctree differ
diff --git a/v5.9.x/.doctrees/newapp.doctree b/v5.9.x/.doctrees/newapp.doctree
index 7815f4271..40ff34fca 100644
Binary files a/v5.9.x/.doctrees/newapp.doctree and b/v5.9.x/.doctrees/newapp.doctree differ
diff --git a/v5.9.x/.doctrees/okada.doctree b/v5.9.x/.doctrees/okada.doctree
index bbe83acb3..646f88f89 100644
Binary files a/v5.9.x/.doctrees/okada.doctree and b/v5.9.x/.doctrees/okada.doctree differ
diff --git a/v5.9.x/.doctrees/openmp.doctree b/v5.9.x/.doctrees/openmp.doctree
index 4a91742df..fac86cfa8 100644
Binary files a/v5.9.x/.doctrees/openmp.doctree and b/v5.9.x/.doctrees/openmp.doctree differ
diff --git a/v5.9.x/.doctrees/output_styles.doctree b/v5.9.x/.doctrees/output_styles.doctree
index 3d68340a6..f9aa7cc7e 100644
Binary files a/v5.9.x/.doctrees/output_styles.doctree and b/v5.9.x/.doctrees/output_styles.doctree differ
diff --git a/v5.9.x/.doctrees/packages.doctree b/v5.9.x/.doctrees/packages.doctree
index 4cbdfd396..ccc6690f0 100644
Binary files a/v5.9.x/.doctrees/packages.doctree and b/v5.9.x/.doctrees/packages.doctree differ
diff --git a/v5.9.x/.doctrees/photos.doctree b/v5.9.x/.doctrees/photos.doctree
index 745b7f81c..eb4b45542 100644
Binary files a/v5.9.x/.doctrees/photos.doctree and b/v5.9.x/.doctrees/photos.doctree differ
diff --git a/v5.9.x/.doctrees/plotexamples.doctree b/v5.9.x/.doctrees/plotexamples.doctree
index 142e03aa0..fe96a604a 100644
Binary files a/v5.9.x/.doctrees/plotexamples.doctree and b/v5.9.x/.doctrees/plotexamples.doctree differ
diff --git a/v5.9.x/.doctrees/plotting.doctree b/v5.9.x/.doctrees/plotting.doctree
index 600e8740a..1bda40084 100644
Binary files a/v5.9.x/.doctrees/plotting.doctree and b/v5.9.x/.doctrees/plotting.doctree differ
diff --git a/v5.9.x/.doctrees/plotting_faq.doctree b/v5.9.x/.doctrees/plotting_faq.doctree
index 78059cb54..324fdd229 100644
Binary files a/v5.9.x/.doctrees/plotting_faq.doctree and b/v5.9.x/.doctrees/plotting_faq.doctree differ
diff --git a/v5.9.x/.doctrees/plotting_geoclaw.doctree b/v5.9.x/.doctrees/plotting_geoclaw.doctree
index ff4f93360..3b5858322 100644
Binary files a/v5.9.x/.doctrees/plotting_geoclaw.doctree and b/v5.9.x/.doctrees/plotting_geoclaw.doctree differ
diff --git a/v5.9.x/.doctrees/plotting_python.doctree b/v5.9.x/.doctrees/plotting_python.doctree
index 1505fa448..954d78530 100644
Binary files a/v5.9.x/.doctrees/plotting_python.doctree and b/v5.9.x/.doctrees/plotting_python.doctree differ
diff --git a/v5.9.x/.doctrees/prereqs.doctree b/v5.9.x/.doctrees/prereqs.doctree
index 36687cbe1..c33d316f2 100644
Binary files a/v5.9.x/.doctrees/prereqs.doctree and b/v5.9.x/.doctrees/prereqs.doctree differ
diff --git a/v5.9.x/.doctrees/pyclaw/about.doctree b/v5.9.x/.doctrees/pyclaw/about.doctree
index 8e9f93d1e..b5c9d7424 100644
Binary files a/v5.9.x/.doctrees/pyclaw/about.doctree and b/v5.9.x/.doctrees/pyclaw/about.doctree differ
diff --git a/v5.9.x/.doctrees/pyclaw/basics.doctree b/v5.9.x/.doctrees/pyclaw/basics.doctree
index d8bfb128b..6df49f896 100644
Binary files a/v5.9.x/.doctrees/pyclaw/basics.doctree and b/v5.9.x/.doctrees/pyclaw/basics.doctree differ
diff --git a/v5.9.x/.doctrees/pyclaw/classes.doctree b/v5.9.x/.doctrees/pyclaw/classes.doctree
index e6623b5c2..03f0cefdf 100644
Binary files a/v5.9.x/.doctrees/pyclaw/classes.doctree and b/v5.9.x/.doctrees/pyclaw/classes.doctree differ
diff --git a/v5.9.x/.doctrees/pyclaw/clawpack_and_pyclaw.doctree b/v5.9.x/.doctrees/pyclaw/clawpack_and_pyclaw.doctree
index f808cff4e..dab415a11 100644
Binary files a/v5.9.x/.doctrees/pyclaw/clawpack_and_pyclaw.doctree and b/v5.9.x/.doctrees/pyclaw/clawpack_and_pyclaw.doctree differ
diff --git a/v5.9.x/.doctrees/pyclaw/cloud.doctree b/v5.9.x/.doctrees/pyclaw/cloud.doctree
index 83be25012..dd8fb9aeb 100644
Binary files a/v5.9.x/.doctrees/pyclaw/cloud.doctree and b/v5.9.x/.doctrees/pyclaw/cloud.doctree differ
diff --git a/v5.9.x/.doctrees/pyclaw/controller.doctree b/v5.9.x/.doctrees/pyclaw/controller.doctree
index 86eb2f7cc..49ede1479 100644
Binary files a/v5.9.x/.doctrees/pyclaw/controller.doctree and b/v5.9.x/.doctrees/pyclaw/controller.doctree differ
diff --git a/v5.9.x/.doctrees/pyclaw/evolve/limiters.doctree b/v5.9.x/.doctrees/pyclaw/evolve/limiters.doctree
index c2de62fce..0780c0df7 100644
Binary files a/v5.9.x/.doctrees/pyclaw/evolve/limiters.doctree and b/v5.9.x/.doctrees/pyclaw/evolve/limiters.doctree differ
diff --git a/v5.9.x/.doctrees/pyclaw/examples.doctree b/v5.9.x/.doctrees/pyclaw/examples.doctree
index 475a61b99..a701a021b 100644
Binary files a/v5.9.x/.doctrees/pyclaw/examples.doctree and b/v5.9.x/.doctrees/pyclaw/examples.doctree differ
diff --git a/v5.9.x/.doctrees/pyclaw/geometry.doctree b/v5.9.x/.doctrees/pyclaw/geometry.doctree
index a98df7884..3db7f81cc 100644
Binary files a/v5.9.x/.doctrees/pyclaw/geometry.doctree and b/v5.9.x/.doctrees/pyclaw/geometry.doctree differ
diff --git a/v5.9.x/.doctrees/pyclaw/going_further.doctree b/v5.9.x/.doctrees/pyclaw/going_further.doctree
index 2f91cd032..f6be3f359 100644
Binary files a/v5.9.x/.doctrees/pyclaw/going_further.doctree and b/v5.9.x/.doctrees/pyclaw/going_further.doctree differ
diff --git a/v5.9.x/.doctrees/pyclaw/index.doctree b/v5.9.x/.doctrees/pyclaw/index.doctree
index 616ea0228..2eac9157c 100644
Binary files a/v5.9.x/.doctrees/pyclaw/index.doctree and b/v5.9.x/.doctrees/pyclaw/index.doctree differ
diff --git a/v5.9.x/.doctrees/pyclaw/io.doctree b/v5.9.x/.doctrees/pyclaw/io.doctree
index 8423ade3a..807de4aac 100644
Binary files a/v5.9.x/.doctrees/pyclaw/io.doctree and b/v5.9.x/.doctrees/pyclaw/io.doctree differ
diff --git a/v5.9.x/.doctrees/pyclaw/output.doctree b/v5.9.x/.doctrees/pyclaw/output.doctree
index 157d2fc22..f0786a0ff 100644
Binary files a/v5.9.x/.doctrees/pyclaw/output.doctree and b/v5.9.x/.doctrees/pyclaw/output.doctree differ
diff --git a/v5.9.x/.doctrees/pyclaw/parallel.doctree b/v5.9.x/.doctrees/pyclaw/parallel.doctree
index cc38027d0..2ef7976e0 100644
Binary files a/v5.9.x/.doctrees/pyclaw/parallel.doctree and b/v5.9.x/.doctrees/pyclaw/parallel.doctree differ
diff --git a/v5.9.x/.doctrees/pyclaw/plotting.doctree b/v5.9.x/.doctrees/pyclaw/plotting.doctree
index f5fc07303..e3ff34484 100644
Binary files a/v5.9.x/.doctrees/pyclaw/plotting.doctree and b/v5.9.x/.doctrees/pyclaw/plotting.doctree differ
diff --git a/v5.9.x/.doctrees/pyclaw/problem.doctree b/v5.9.x/.doctrees/pyclaw/problem.doctree
index a13d6d068..8822118b9 100644
Binary files a/v5.9.x/.doctrees/pyclaw/problem.doctree and b/v5.9.x/.doctrees/pyclaw/problem.doctree differ
diff --git a/v5.9.x/.doctrees/pyclaw/rp.doctree b/v5.9.x/.doctrees/pyclaw/rp.doctree
index 7fe850cef..b0464e091 100644
Binary files a/v5.9.x/.doctrees/pyclaw/rp.doctree and b/v5.9.x/.doctrees/pyclaw/rp.doctree differ
diff --git a/v5.9.x/.doctrees/pyclaw/solution.doctree b/v5.9.x/.doctrees/pyclaw/solution.doctree
index 7851e467a..ee1670289 100644
Binary files a/v5.9.x/.doctrees/pyclaw/solution.doctree and b/v5.9.x/.doctrees/pyclaw/solution.doctree differ
diff --git a/v5.9.x/.doctrees/pyclaw/solvers.doctree b/v5.9.x/.doctrees/pyclaw/solvers.doctree
index f7889305c..92b0f938b 100644
Binary files a/v5.9.x/.doctrees/pyclaw/solvers.doctree and b/v5.9.x/.doctrees/pyclaw/solvers.doctree differ
diff --git a/v5.9.x/.doctrees/pyclaw/started.doctree b/v5.9.x/.doctrees/pyclaw/started.doctree
index 1924fd976..80c9ea493 100644
Binary files a/v5.9.x/.doctrees/pyclaw/started.doctree and b/v5.9.x/.doctrees/pyclaw/started.doctree differ
diff --git a/v5.9.x/.doctrees/pyclaw/state.doctree b/v5.9.x/.doctrees/pyclaw/state.doctree
index 976c1f998..ecfbe4159 100644
Binary files a/v5.9.x/.doctrees/pyclaw/state.doctree and b/v5.9.x/.doctrees/pyclaw/state.doctree differ
diff --git a/v5.9.x/.doctrees/pyclaw/troubleshooting.doctree b/v5.9.x/.doctrees/pyclaw/troubleshooting.doctree
index 494b3a72d..cb08c374f 100644
Binary files a/v5.9.x/.doctrees/pyclaw/troubleshooting.doctree and b/v5.9.x/.doctrees/pyclaw/troubleshooting.doctree differ
diff --git a/v5.9.x/.doctrees/pyclaw/tutorial.doctree b/v5.9.x/.doctrees/pyclaw/tutorial.doctree
index e99b25a1e..3c82f0d7c 100644
Binary files a/v5.9.x/.doctrees/pyclaw/tutorial.doctree and b/v5.9.x/.doctrees/pyclaw/tutorial.doctree differ
diff --git a/v5.9.x/.doctrees/pyclaw/util.doctree b/v5.9.x/.doctrees/pyclaw/util.doctree
index f31b9ead8..7e5f1c5eb 100644
Binary files a/v5.9.x/.doctrees/pyclaw/util.doctree and b/v5.9.x/.doctrees/pyclaw/util.doctree differ
diff --git a/v5.9.x/.doctrees/python.doctree b/v5.9.x/.doctrees/python.doctree
index 302784174..db7b8dcc6 100644
Binary files a/v5.9.x/.doctrees/python.doctree and b/v5.9.x/.doctrees/python.doctree differ
diff --git a/v5.9.x/.doctrees/python_path.doctree b/v5.9.x/.doctrees/python_path.doctree
index 638f67249..de802cca6 100644
Binary files a/v5.9.x/.doctrees/python_path.doctree and b/v5.9.x/.doctrees/python_path.doctree differ
diff --git a/v5.9.x/.doctrees/qinit_defaults.doctree b/v5.9.x/.doctrees/qinit_defaults.doctree
index 3e9b1ecc1..b87cffafc 100644
Binary files a/v5.9.x/.doctrees/qinit_defaults.doctree and b/v5.9.x/.doctrees/qinit_defaults.doctree differ
diff --git a/v5.9.x/.doctrees/quick_surge.doctree b/v5.9.x/.doctrees/quick_surge.doctree
index cf0653dd3..df181c84e 100644
Binary files a/v5.9.x/.doctrees/quick_surge.doctree and b/v5.9.x/.doctrees/quick_surge.doctree differ
diff --git a/v5.9.x/.doctrees/quick_tsunami.doctree b/v5.9.x/.doctrees/quick_tsunami.doctree
index 3d70f8b70..1d436437f 100644
Binary files a/v5.9.x/.doctrees/quick_tsunami.doctree and b/v5.9.x/.doctrees/quick_tsunami.doctree differ
diff --git a/v5.9.x/.doctrees/refinement.doctree b/v5.9.x/.doctrees/refinement.doctree
index 868b0921e..a2b5b7a67 100644
Binary files a/v5.9.x/.doctrees/refinement.doctree and b/v5.9.x/.doctrees/refinement.doctree differ
diff --git a/v5.9.x/.doctrees/regression.doctree b/v5.9.x/.doctrees/regression.doctree
index 59b7db546..cb93bf87a 100644
Binary files a/v5.9.x/.doctrees/regression.doctree and b/v5.9.x/.doctrees/regression.doctree differ
diff --git a/v5.9.x/.doctrees/release_5_0_0.doctree b/v5.9.x/.doctrees/release_5_0_0.doctree
index e060d9e36..6805806c9 100644
Binary files a/v5.9.x/.doctrees/release_5_0_0.doctree and b/v5.9.x/.doctrees/release_5_0_0.doctree differ
diff --git a/v5.9.x/.doctrees/release_5_1_0.doctree b/v5.9.x/.doctrees/release_5_1_0.doctree
index f79fa40fe..68dc6f181 100644
Binary files a/v5.9.x/.doctrees/release_5_1_0.doctree and b/v5.9.x/.doctrees/release_5_1_0.doctree differ
diff --git a/v5.9.x/.doctrees/release_5_2_0.doctree b/v5.9.x/.doctrees/release_5_2_0.doctree
index 2220e7a54..805d53623 100644
Binary files a/v5.9.x/.doctrees/release_5_2_0.doctree and b/v5.9.x/.doctrees/release_5_2_0.doctree differ
diff --git a/v5.9.x/.doctrees/release_5_2_1.doctree b/v5.9.x/.doctrees/release_5_2_1.doctree
index 45eaba512..4bac436ad 100644
Binary files a/v5.9.x/.doctrees/release_5_2_1.doctree and b/v5.9.x/.doctrees/release_5_2_1.doctree differ
diff --git a/v5.9.x/.doctrees/release_5_2_2.doctree b/v5.9.x/.doctrees/release_5_2_2.doctree
index 8628b5cdc..6de9addeb 100644
Binary files a/v5.9.x/.doctrees/release_5_2_2.doctree and b/v5.9.x/.doctrees/release_5_2_2.doctree differ
diff --git a/v5.9.x/.doctrees/release_5_3_0.doctree b/v5.9.x/.doctrees/release_5_3_0.doctree
index bb4fc4b88..8741025b5 100644
Binary files a/v5.9.x/.doctrees/release_5_3_0.doctree and b/v5.9.x/.doctrees/release_5_3_0.doctree differ
diff --git a/v5.9.x/.doctrees/release_5_3_1.doctree b/v5.9.x/.doctrees/release_5_3_1.doctree
index 5f57757e6..47af3f919 100644
Binary files a/v5.9.x/.doctrees/release_5_3_1.doctree and b/v5.9.x/.doctrees/release_5_3_1.doctree differ
diff --git a/v5.9.x/.doctrees/release_5_4_0.doctree b/v5.9.x/.doctrees/release_5_4_0.doctree
index 7e0c542eb..4cf7d049e 100644
Binary files a/v5.9.x/.doctrees/release_5_4_0.doctree and b/v5.9.x/.doctrees/release_5_4_0.doctree differ
diff --git a/v5.9.x/.doctrees/release_5_4_1.doctree b/v5.9.x/.doctrees/release_5_4_1.doctree
index 599ed1600..3e6e3491b 100644
Binary files a/v5.9.x/.doctrees/release_5_4_1.doctree and b/v5.9.x/.doctrees/release_5_4_1.doctree differ
diff --git a/v5.9.x/.doctrees/release_5_5_0.doctree b/v5.9.x/.doctrees/release_5_5_0.doctree
index 18fc2a3c9..bea4c4efb 100644
Binary files a/v5.9.x/.doctrees/release_5_5_0.doctree and b/v5.9.x/.doctrees/release_5_5_0.doctree differ
diff --git a/v5.9.x/.doctrees/release_5_6_0.doctree b/v5.9.x/.doctrees/release_5_6_0.doctree
index 61424b306..32483181e 100644
Binary files a/v5.9.x/.doctrees/release_5_6_0.doctree and b/v5.9.x/.doctrees/release_5_6_0.doctree differ
diff --git a/v5.9.x/.doctrees/release_5_6_1.doctree b/v5.9.x/.doctrees/release_5_6_1.doctree
index 18bd79b9f..1f6174017 100644
Binary files a/v5.9.x/.doctrees/release_5_6_1.doctree and b/v5.9.x/.doctrees/release_5_6_1.doctree differ
diff --git a/v5.9.x/.doctrees/release_5_7_0.doctree b/v5.9.x/.doctrees/release_5_7_0.doctree
index fa21aac3a..eae87f235 100644
Binary files a/v5.9.x/.doctrees/release_5_7_0.doctree and b/v5.9.x/.doctrees/release_5_7_0.doctree differ
diff --git a/v5.9.x/.doctrees/release_5_7_1.doctree b/v5.9.x/.doctrees/release_5_7_1.doctree
index f6a51a0c7..a1e01f126 100644
Binary files a/v5.9.x/.doctrees/release_5_7_1.doctree and b/v5.9.x/.doctrees/release_5_7_1.doctree differ
diff --git a/v5.9.x/.doctrees/release_5_8_0.doctree b/v5.9.x/.doctrees/release_5_8_0.doctree
index 221024a6c..d1180fcfb 100644
Binary files a/v5.9.x/.doctrees/release_5_8_0.doctree and b/v5.9.x/.doctrees/release_5_8_0.doctree differ
diff --git a/v5.9.x/.doctrees/release_5_8_1.doctree b/v5.9.x/.doctrees/release_5_8_1.doctree
index 5fb866372..e6e72c841 100644
Binary files a/v5.9.x/.doctrees/release_5_8_1.doctree and b/v5.9.x/.doctrees/release_5_8_1.doctree differ
diff --git a/v5.9.x/.doctrees/release_5_8_2.doctree b/v5.9.x/.doctrees/release_5_8_2.doctree
index c9d672672..3f7ab1cee 100644
Binary files a/v5.9.x/.doctrees/release_5_8_2.doctree and b/v5.9.x/.doctrees/release_5_8_2.doctree differ
diff --git a/v5.9.x/.doctrees/release_5_9_0.doctree b/v5.9.x/.doctrees/release_5_9_0.doctree
index c3aadbbb7..eb599ced8 100644
Binary files a/v5.9.x/.doctrees/release_5_9_0.doctree and b/v5.9.x/.doctrees/release_5_9_0.doctree differ
diff --git a/v5.9.x/.doctrees/release_5_9_1.doctree b/v5.9.x/.doctrees/release_5_9_1.doctree
index 4821faf06..07d3b6c23 100644
Binary files a/v5.9.x/.doctrees/release_5_9_1.doctree and b/v5.9.x/.doctrees/release_5_9_1.doctree differ
diff --git a/v5.9.x/.doctrees/release_5_9_2.doctree b/v5.9.x/.doctrees/release_5_9_2.doctree
index 2fad23ecc..c51b25dba 100644
Binary files a/v5.9.x/.doctrees/release_5_9_2.doctree and b/v5.9.x/.doctrees/release_5_9_2.doctree differ
diff --git a/v5.9.x/.doctrees/releases.doctree b/v5.9.x/.doctrees/releases.doctree
index a5fc31068..38c4f2787 100644
Binary files a/v5.9.x/.doctrees/releases.doctree and b/v5.9.x/.doctrees/releases.doctree differ
diff --git a/v5.9.x/.doctrees/restart.doctree b/v5.9.x/.doctrees/restart.doctree
index a96cad947..21c01400f 100644
Binary files a/v5.9.x/.doctrees/restart.doctree and b/v5.9.x/.doctrees/restart.doctree differ
diff --git a/v5.9.x/.doctrees/riemann.doctree b/v5.9.x/.doctrees/riemann.doctree
index 7778456d5..1a1c49cfc 100644
Binary files a/v5.9.x/.doctrees/riemann.doctree and b/v5.9.x/.doctrees/riemann.doctree differ
diff --git a/v5.9.x/.doctrees/riemann/Shallow_water_Riemann_solvers.doctree b/v5.9.x/.doctrees/riemann/Shallow_water_Riemann_solvers.doctree
index cc2f82756..80ff8d8e4 100644
Binary files a/v5.9.x/.doctrees/riemann/Shallow_water_Riemann_solvers.doctree and b/v5.9.x/.doctrees/riemann/Shallow_water_Riemann_solvers.doctree differ
diff --git a/v5.9.x/.doctrees/ruled_rectangles.doctree b/v5.9.x/.doctrees/ruled_rectangles.doctree
index aaaef488d..3fc4248ed 100644
Binary files a/v5.9.x/.doctrees/ruled_rectangles.doctree and b/v5.9.x/.doctrees/ruled_rectangles.doctree differ
diff --git a/v5.9.x/.doctrees/sealevel.doctree b/v5.9.x/.doctrees/sealevel.doctree
index cbd2cc61e..47968b217 100644
Binary files a/v5.9.x/.doctrees/sealevel.doctree and b/v5.9.x/.doctrees/sealevel.doctree differ
diff --git a/v5.9.x/.doctrees/set_eta_init.doctree b/v5.9.x/.doctrees/set_eta_init.doctree
index 691f3294a..5ff5221ce 100644
Binary files a/v5.9.x/.doctrees/set_eta_init.doctree and b/v5.9.x/.doctrees/set_eta_init.doctree differ
diff --git a/v5.9.x/.doctrees/setaux_defaults.doctree b/v5.9.x/.doctrees/setaux_defaults.doctree
index 0826ec0ed..81e23ca20 100644
Binary files a/v5.9.x/.doctrees/setaux_defaults.doctree and b/v5.9.x/.doctrees/setaux_defaults.doctree differ
diff --git a/v5.9.x/.doctrees/setenv.doctree b/v5.9.x/.doctrees/setenv.doctree
index 822c7c742..a9046a4a2 100644
Binary files a/v5.9.x/.doctrees/setenv.doctree and b/v5.9.x/.doctrees/setenv.doctree differ
diff --git a/v5.9.x/.doctrees/setplot.doctree b/v5.9.x/.doctrees/setplot.doctree
index e6c80f0cc..8f497905f 100644
Binary files a/v5.9.x/.doctrees/setplot.doctree and b/v5.9.x/.doctrees/setplot.doctree differ
diff --git a/v5.9.x/.doctrees/setrun.doctree b/v5.9.x/.doctrees/setrun.doctree
index 40bdec852..878f0466f 100644
Binary files a/v5.9.x/.doctrees/setrun.doctree and b/v5.9.x/.doctrees/setrun.doctree differ
diff --git a/v5.9.x/.doctrees/setrun_amrclaw.doctree b/v5.9.x/.doctrees/setrun_amrclaw.doctree
index dd5beb184..5a0bf8075 100644
Binary files a/v5.9.x/.doctrees/setrun_amrclaw.doctree and b/v5.9.x/.doctrees/setrun_amrclaw.doctree differ
diff --git a/v5.9.x/.doctrees/setrun_amrclaw_sample.doctree b/v5.9.x/.doctrees/setrun_amrclaw_sample.doctree
index 9253bb292..8cdf018e1 100644
Binary files a/v5.9.x/.doctrees/setrun_amrclaw_sample.doctree and b/v5.9.x/.doctrees/setrun_amrclaw_sample.doctree differ
diff --git a/v5.9.x/.doctrees/setrun_geoclaw.doctree b/v5.9.x/.doctrees/setrun_geoclaw.doctree
index 1e9600eac..ff3075911 100644
Binary files a/v5.9.x/.doctrees/setrun_geoclaw.doctree and b/v5.9.x/.doctrees/setrun_geoclaw.doctree differ
diff --git a/v5.9.x/.doctrees/setrun_sample.doctree b/v5.9.x/.doctrees/setrun_sample.doctree
index 515d6480a..062c25cba 100644
Binary files a/v5.9.x/.doctrees/setrun_sample.doctree and b/v5.9.x/.doctrees/setrun_sample.doctree differ
diff --git a/v5.9.x/.doctrees/sharing.doctree b/v5.9.x/.doctrees/sharing.doctree
index e3d35a7e8..ff1f20ab1 100644
Binary files a/v5.9.x/.doctrees/sharing.doctree and b/v5.9.x/.doctrees/sharing.doctree differ
diff --git a/v5.9.x/.doctrees/sphere_source.doctree b/v5.9.x/.doctrees/sphere_source.doctree
index 54451bf76..2d6ed9397 100644
Binary files a/v5.9.x/.doctrees/sphere_source.doctree and b/v5.9.x/.doctrees/sphere_source.doctree differ
diff --git a/v5.9.x/.doctrees/sphinxdoc.doctree b/v5.9.x/.doctrees/sphinxdoc.doctree
index 0aadaabab..07ff39cc1 100644
Binary files a/v5.9.x/.doctrees/sphinxdoc.doctree and b/v5.9.x/.doctrees/sphinxdoc.doctree differ
diff --git a/v5.9.x/.doctrees/src1d_defaults.doctree b/v5.9.x/.doctrees/src1d_defaults.doctree
index e09b66e40..7497c471b 100644
Binary files a/v5.9.x/.doctrees/src1d_defaults.doctree and b/v5.9.x/.doctrees/src1d_defaults.doctree differ
diff --git a/v5.9.x/.doctrees/src_defaults.doctree b/v5.9.x/.doctrees/src_defaults.doctree
index 9c8d79a6a..6cdd142bb 100644
Binary files a/v5.9.x/.doctrees/src_defaults.doctree and b/v5.9.x/.doctrees/src_defaults.doctree differ
diff --git a/v5.9.x/.doctrees/storm_module.doctree b/v5.9.x/.doctrees/storm_module.doctree
index 85ddc9e56..704872a6c 100644
Binary files a/v5.9.x/.doctrees/storm_module.doctree and b/v5.9.x/.doctrees/storm_module.doctree differ
diff --git a/v5.9.x/.doctrees/surgedata.doctree b/v5.9.x/.doctrees/surgedata.doctree
index d6276fe4d..72aa8ddfd 100644
Binary files a/v5.9.x/.doctrees/surgedata.doctree and b/v5.9.x/.doctrees/surgedata.doctree differ
diff --git a/v5.9.x/.doctrees/testing.doctree b/v5.9.x/.doctrees/testing.doctree
index f79f68fac..2720e60a4 100644
Binary files a/v5.9.x/.doctrees/testing.doctree and b/v5.9.x/.doctrees/testing.doctree differ
diff --git a/v5.9.x/.doctrees/timing.doctree b/v5.9.x/.doctrees/timing.doctree
index 9f38af814..c73b61db7 100644
Binary files a/v5.9.x/.doctrees/timing.doctree and b/v5.9.x/.doctrees/timing.doctree differ
diff --git a/v5.9.x/.doctrees/topo.doctree b/v5.9.x/.doctrees/topo.doctree
index 2d74ff47b..532c4c422 100644
Binary files a/v5.9.x/.doctrees/topo.doctree and b/v5.9.x/.doctrees/topo.doctree differ
diff --git a/v5.9.x/.doctrees/topotools.doctree b/v5.9.x/.doctrees/topotools.doctree
index 742737a0d..0723cf345 100644
Binary files a/v5.9.x/.doctrees/topotools.doctree and b/v5.9.x/.doctrees/topotools.doctree differ
diff --git a/v5.9.x/.doctrees/topotools_module.doctree b/v5.9.x/.doctrees/topotools_module.doctree
index a08b8ca1d..3c11d3a83 100644
Binary files a/v5.9.x/.doctrees/topotools_module.doctree and b/v5.9.x/.doctrees/topotools_module.doctree differ
diff --git a/v5.9.x/.doctrees/trouble.doctree b/v5.9.x/.doctrees/trouble.doctree
index d9e1feb14..21fd9766d 100644
Binary files a/v5.9.x/.doctrees/trouble.doctree and b/v5.9.x/.doctrees/trouble.doctree differ
diff --git a/v5.9.x/.doctrees/tsunamidata.doctree b/v5.9.x/.doctrees/tsunamidata.doctree
index 0f482d7e1..c58361fc9 100644
Binary files a/v5.9.x/.doctrees/tsunamidata.doctree and b/v5.9.x/.doctrees/tsunamidata.doctree differ
diff --git a/v5.9.x/.doctrees/user_routines.doctree b/v5.9.x/.doctrees/user_routines.doctree
index aa8291b39..19bb4eacb 100644
Binary files a/v5.9.x/.doctrees/user_routines.doctree and b/v5.9.x/.doctrees/user_routines.doctree differ
diff --git a/v5.9.x/.doctrees/visit_plotting.doctree b/v5.9.x/.doctrees/visit_plotting.doctree
index c1d0bd443..4ea601a54 100644
Binary files a/v5.9.x/.doctrees/visit_plotting.doctree and b/v5.9.x/.doctrees/visit_plotting.doctree differ
diff --git a/v5.9.x/.doctrees/vm.doctree b/v5.9.x/.doctrees/vm.doctree
index b687d8b19..4dbe165d9 100644
Binary files a/v5.9.x/.doctrees/vm.doctree and b/v5.9.x/.doctrees/vm.doctree differ
diff --git a/v5.9.x/.doctrees/wp_algorithms.doctree b/v5.9.x/.doctrees/wp_algorithms.doctree
index 8a6feb3f7..7eac14986 100644
Binary files a/v5.9.x/.doctrees/wp_algorithms.doctree and b/v5.9.x/.doctrees/wp_algorithms.doctree differ