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When attempting to install the UMD-packaged version of fts-rest-cli into singularity container (found in this repo I hit upon some missing dependencies when attempting to run the client.
fts-rest-transfer-submit --help
Traceback (most recent call last):
File "/bin/fts-rest-transfer-submit", line 2, in <module>
from fts3.cli import JobSubmitter
File "/usr/lib/python2.7/site-packages/fts3/__init__.py", line 1, in <module>
import pkg_resources
ImportError: No module named pkg_resources
This first error was resolved by adding the python-setuptools package to the container build def.
Following that a second error was also encountered:
fts-rest-transfer-submit --help
Traceback (most recent call last):
File "/bin/fts-rest-transfer-submit", line 2, in <module>
from fts3.cli import JobSubmitter
File "/usr/lib/python2.7/site-packages/fts3/cli/__init__.py", line
18, in <module>
from banning import Banning
File "/usr/lib/python2.7/site-packages/fts3/cli/banning.py", line
18, in <module>
from base import Base
File "/usr/lib/python2.7/site-packages/fts3/cli/base.py", line 25, in <module>
from fts3.rest.client import Context
File "/usr/lib/python2.7/site-packages/fts3/rest/client/__init__.py",
line 19, in <module>
from context import Context
File "/usr/lib/python2.7/site-packages/fts3/rest/client/context.py",
line 36, in <module>
from request import Request
File "/usr/lib/python2.7/site-packages/fts3/rest/client/request.py",
line 20, in <module>
import requests
File "/users/aikema/.local/lib/python2.7/site-packages/requests/__init__.py",
line 97, in <module>
from . import utils
File "/users/aikema/.local/lib/python2.7/site-packages/requests/utils.py",
line 24, in <module>
from . import certs
File "/users/aikema/.local/lib/python2.7/site-packages/requests/certs.py",
line 15, in <module>
from certifi import where
ImportError: No module named certifi
I didn't notice any package available via yum which would resolve this missing dependency issue so for the moment I'm installing this via pip in the container def file.
The text was updated successfully, but these errors were encountered:
daikema
changed the title
Missing dependencies for fts-rest-cli
Missing dependencies for fts-rest-cli
Jun 25, 2018
Thanks @daikema ! I'll take a look and see if I can reproduce and fix. This fix will probably come in in a separate role or channel but you'll also be notified her.
I discovered that the requests package was being pulled from my home directory as when I ran as another user I hit the following error:
Traceback (most recent call last):
File "/bin/fts-rest-transfer-list", line 2, in <module>
from fts3.cli import JobLister
File "/usr/lib/python2.7/site-packages/fts3/cli/__init__.py", line 18, in <module>
from banning import Banning
File "/usr/lib/python2.7/site-packages/fts3/cli/banning.py", line 18, in <module>
from base import Base
File "/usr/lib/python2.7/site-packages/fts3/cli/base.py", line 25, in <module>
from fts3.rest.client import Context
File "/usr/lib/python2.7/site-packages/fts3/rest/client/__init__.py", line 19, in <module>
from context import Context
File "/usr/lib/python2.7/site-packages/fts3/rest/client/context.py", line 36, in <module>
from request import Request
File "/usr/lib/python2.7/site-packages/fts3/rest/client/request.py", line 20, in <module>
import requests
ImportError: No module named requests
Installing the python2-requests package resolved this issue.
When attempting to install the UMD-packaged version of
fts-rest-cli
into singularity container (found in this repo I hit upon some missing dependencies when attempting to run the client.This first error was resolved by adding the
python-setuptools
package to the container build def.Following that a second error was also encountered:
I didn't notice any package available via
yum
which would resolve this missing dependency issue so for the moment I'm installing this viapip
in the container def file.The text was updated successfully, but these errors were encountered: