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I have several ShinyCell apps hosted on a Shiny-Server. Everything works fine until I try to download the plot in the Bubbleplot / Heatmap tab. In all other tabbs this is not a problem. I tried changing gene sets, plot type, color schemes, plot size etc. but couldn't solve the problem.
When running the app in RStudio this issue doesn't occur.
This is the content of the server logs:
su: ignoring --preserve-environment, it's mutually exclusive with --login
Listening on http://127.0.0.1:41203
Attaching package: ‘DT’
The following objects are masked from ‘package:shiny’:
dataTableOutput, renderDataTable
Warning: Navigation containers expect a collection of `bslib::nav_panel()`/`shiny::tabPanel()`s and/or `bslib::nav_menu()`/`shiny::navbarMenu()`s. Consider using `header` or `footer` if you wish to place content above (or below) every panel's contents.
Warning: Navigation containers expect a collection of `bslib::nav_panel()`/`shiny::tabPanel()`s and/or `bslib::nav_menu()`/`shiny::navbarMenu()`s. Consider using `header` or `footer` if you wish to place content above (or below) every panel's contents.
Warning: Navigation containers expect a collection of `bslib::nav_panel()`/`shiny::tabPanel()`s and/or `bslib::nav_menu()`/`shiny::navbarMenu()`s. Consider using `header` or `footer` if you wish to place content above (or below) every panel's contents.
Warning: Navigation containers expect a collection of `bslib::nav_panel()`/`shiny::tabPanel()`s and/or `bslib::nav_menu()`/`shiny::navbarMenu()`s. Consider using `header` or `footer` if you wish to place content above (or below) every panel's contents.
Warning: Navigation containers expect a collection of `bslib::nav_panel()`/`shiny::tabPanel()`s and/or `bslib::nav_menu()`/`shiny::navbarMenu()`s. Consider using `header` or `footer` if you wish to place content above (or below) every panel's contents.
Warning: Navigation containers expect a collection of `bslib::nav_panel()`/`shiny::tabPanel()`s and/or `bslib::nav_menu()`/`shiny::navbarMenu()`s. Consider using `header` or `footer` if you wish to place content above (or below) every panel's contents.
Warning: Navigation containers expect a collection of `bslib::nav_panel()`/`shiny::tabPanel()`s and/or `bslib::nav_menu()`/`shiny::navbarMenu()`s. Consider using `header` or `footer` if you wish to place content above (or below) every panel's contents.
Warning: Navigation containers expect a collection of `bslib::nav_panel()`/`shiny::tabPanel()`s and/or `bslib::nav_menu()`/`shiny::navbarMenu()`s. Consider using `header` or `footer` if you wish to place content above (or below) every panel's contents.
Warning: Error in if: missing value where TRUE/FALSE needed
107: args_regularity_evaluation
106: h5data$read
105: scDRnum [/apps/INKILL_NK/server.R#157]
104: exprFunc [/apps/INKILL_NK/server.R#705]
103: widgetFunc
102: ::
htmlwidgets
shinyRenderWidget
101: func
88: renderFunc
87: renderFunc
83: renderFunc
82: output$sc1a1.dt
1: runApp
Warning: The `size` argument of `element_line()` is deprecated as of ggplot2 3.4.0.
ℹ Please use the `linewidth` argument instead.
Warning: Error in <Anonymous>: cannot open file 'Rplots.pdf'
1: runApp
Warning: Error in <Anonymous>: cannot open file 'Rplots.pdf'
1: runApp
Whenever I click the download button the following line is added to the log: Warning: Error in : cannot open file 'Rplots.pdf'
The text was updated successfully, but these errors were encountered:
scriptbotprime
changed the title
Cand't download Bubbleplot/Heatmap
Can't download Bubbleplot/Heatmap
Nov 28, 2024
I have several ShinyCell apps hosted on a Shiny-Server. Everything works fine until I try to download the plot in the Bubbleplot / Heatmap tab. In all other tabbs this is not a problem. I tried changing gene sets, plot type, color schemes, plot size etc. but couldn't solve the problem.
When running the app in RStudio this issue doesn't occur.
This is the content of the server logs:
Whenever I click the download button the following line is added to the log: Warning: Error in : cannot open file 'Rplots.pdf'
The text was updated successfully, but these errors were encountered: