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ModuleNotFoundError: No module named 'biom'? #51

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arsilan324 opened this issue Jun 19, 2020 · 1 comment
Open

ModuleNotFoundError: No module named 'biom'? #51

arsilan324 opened this issue Jun 19, 2020 · 1 comment

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@arsilan324
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Hi there,
I want to use FAPROTAX but when I run the command, i get the following error

Traceback (most recent call last):
  File "./collapse_table.py", line 65, in <module>
    import biom
ModuleNotFoundError: No module named 'biom'

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "./collapse_table.py", line 70, in <module>
    if e.message != 'No module named %s'%(name):
AttributeError: 'ModuleNotFoundError' object has no attribute 'message'

Can you please help?
Thanks

@gavinmdouglas
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Just seeing this now sorry, but if anyone else is having similar issues that error means that you need to install the biom-format package.

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