Add FAIRsharing IDs when possible

[cthoyt]

Some KGs correspond to a specific resource, like HGNC or DrugBank, so it would be great to keep a FAIRsharing ID for them. For the ones coming from obo-db-ingest, which are tagged with Bioregistry IDs, you can look up the FAIRsharing ID with the Bioregistry Python package:

>>> import bioregistry
>>> bioregistry.get_fairsharing_prefix("hgnc")
'FAIRsharing.amcv1e'

I could also include this (or other arbitrary information available in the Bioregistry) in the obo-db-ingest metadata (re #49) to help fill out these fields. LMK!

It might even be the case that entries in this registry could be assigned a FAIRsharing ID.

[justaddcoffee]

thanks @cthoyt - to be clear, you suggest using the FAIRsharing ID as the kg-registry ID where possible, right?

[matentzn]

thanks @cthoyt - to be clear, you suggest using the FAIRsharing ID as the kg-registry ID where possible, right?

I would keep those separately to be honest, since the fair sharing key is optional

fairsharing: xys

[justaddcoffee]

@matentzn ah okay, no strong feelings. I guess we'd have to add an attribute fairsharing to the kg-registry schema right @caufieldjh

[sierra-moxon]

Please also consider the information resource registry when naming things (or at least a methodology like it where we can store extra metadata about the source). Having a slot to fill here, with infores identifiers, would be very helpful.

https://biolink.github.io/information-resource-registry/
https://biolink.github.io/information-resource-registry/infores_catalog.yaml

(in particular, the code here to help generate a sankey of data->resulting KG movement is very helpful to consumers)

[matentzn]

Please also consider the information resource registry when naming things (or at least a methodology like it where we can store extra metadata about the source). Having a slot to fill here, with infores identifiers, would be very helpful.

@sierra-moxon very good idea!

we could simply use infores for that!

It might create a little overhead if we actually have to add to the infores catalog but I think this would be useful!