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A small Python application and library to take MBF Bioscience XML and transform it into ex format.

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MBF XML 2 Ex

This program converts MBF XML to Ex format suitable for CMLibs-Zinc.

Install

pip install mbfxml2ex

Usage

mbfxml2exconverter /path/to/input.xml

For more information use the help:

mbfxml2exconverter --help

Developing

When developing install the required packages for running the tests with:

pip install .[test]

Then run the tests with:

python -m unittest discover -s tests

from the repository root directory.

To see the coverage statistics for the package run:

coverage run --source=mbfxml2ex -m unittest discover -s tests

For a nice HTML rendering of the coverage statistics run:

coverage html -d cover

To view the HTML coverage output:

cd cover
python -m http.server 9432

Then, in a web browser navigate to http://localhost:9432

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A small Python application and library to take MBF Bioscience XML and transform it into ex format.

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